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annotate OrthancServer/Sources/Database/Upgrade4To5.sql @ 5334:5b2a5cc64cb1

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upgraded anonymization to Basic Profile of PS 3.15-2023b Table E.1-1
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 27 Jun 2023 15:12:39 +0200
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1 -- Orthanc - A Lightweight, RESTful DICOM Store
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2 -- Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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3 -- Department, University Hospital of Liege, Belgium
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4 -- Copyright (C) 2017-2023 Osimis S.A., Belgium
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5 -- Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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6 --
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7 -- This program is free software: you can redistribute it and/or
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8 -- modify it under the terms of the GNU General Public License as
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9 -- published by the Free Software Foundation, either version 3 of the
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10 -- License, or (at your option) any later version.
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11 --
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12 -- This program is distributed in the hope that it will be useful, but
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13 -- WITHOUT ANY WARRANTY; without even the implied warranty of
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14 -- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 -- General Public License for more details.
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16 --
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17 -- You should have received a copy of the GNU General Public License
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18 -- along with this program. If not, see <http://www.gnu.org/licenses/>.
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20
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21 --
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22 -- This SQLite script updates the version of the Orthanc database from 4 to 5.
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23 --
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24
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25
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26 -- Remove 2 indexes to speed up
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27
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28 DROP INDEX MainDicomTagsIndex2;
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29 DROP INDEX MainDicomTagsIndexValues;
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31
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32 -- Add a new table to index the DICOM identifiers
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33
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34 CREATE TABLE DicomIdentifiers(
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35 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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36 tagGroup INTEGER,
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37 tagElement INTEGER,
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38 value TEXT,
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39 PRIMARY KEY(id, tagGroup, tagElement)
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40 );
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41
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42 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id);
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43 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement);
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44 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY);
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45
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46
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47 -- Migrate data from MainDicomTags to MainResourcesTags and MainInstancesTags
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48
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49 INSERT INTO DicomIdentifiers SELECT * FROM MainDicomTags
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50 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
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51 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
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52 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
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53 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
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54 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
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55
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56 DELETE FROM MainDicomTags
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57 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
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58 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
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59 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
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60 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
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61 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
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64 -- Upgrade the "ResourceDeleted" trigger
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65
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66 DROP TRIGGER ResourceDeleted;
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67 DROP TRIGGER ResourceDeletedParentCleaning;
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68
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69 CREATE TRIGGER ResourceDeleted
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70 AFTER DELETE ON Resources
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71 BEGIN
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72 SELECT SignalResourceDeleted(old.publicId, old.resourceType);
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73 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType)
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74 FROM Resources AS parent WHERE internalId = old.parentId;
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75 END;
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76
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77 CREATE TRIGGER ResourceDeletedParentCleaning
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78 AFTER DELETE ON Resources
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79 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0
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80 BEGIN
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81 DELETE FROM Resources WHERE internalId = old.parentId;
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82 END;
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83
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84
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85 -- Change the database version
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86 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration
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87
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88 UPDATE GlobalProperties SET value="5" WHERE property=1;