Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancGetRequestHandler.cpp @ 4287:5a3374b6e707
using CLOG in Orthanc DICOM handlers
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 04 Nov 2020 17:48:11 +0100 |
parents | 526bd8bad850 |
children | 5b254bd435d3 |
rev | line source |
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3818 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
3818 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
11 * | |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
23 * | |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 #include "PrecompiledHeadersServer.h" | |
34 #include "OrthancGetRequestHandler.h" | |
35 | |
4045 | 36 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h" |
37 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
38 #include "../../OrthancFramework/Sources/Logging.h" | |
39 #include "../../OrthancFramework/Sources/MetricsRegistry.h" | |
3818 | 40 #include "OrthancConfiguration.h" |
41 #include "ServerContext.h" | |
42 #include "ServerJobs/DicomModalityStoreJob.h" | |
43 | |
3963 | 44 #include <dcmtk/dcmdata/dcdeftag.h> |
45 #include <dcmtk/dcmdata/dcfilefo.h> | |
46 #include <dcmtk/dcmdata/dcistrmb.h> | |
47 #include <dcmtk/dcmnet/assoc.h> | |
48 #include <dcmtk/dcmnet/dimse.h> | |
49 #include <dcmtk/dcmnet/diutil.h> | |
50 #include <dcmtk/ofstd/ofstring.h> | |
51 | |
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52 #include <sstream> // For std::stringstream |
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53 |
3818 | 54 namespace Orthanc |
55 { | |
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56 static void ProgressCallback(void *callbackData, |
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57 T_DIMSE_StoreProgress *progress, |
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58 T_DIMSE_C_StoreRQ *req) |
3818 | 59 { |
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60 if (req != NULL && |
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61 progress->state == DIMSE_StoreBegin) |
3818 | 62 { |
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63 OFString str; |
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64 CLOG(TRACE, DICOM) << "Sending Store Request following a C-GET:" << std::endl |
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65 << DIMSE_dumpMessage(str, *req, DIMSE_OUTGOING); |
3818 | 66 } |
67 } | |
68 | |
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69 |
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70 bool OrthancGetRequestHandler::DoNext(T_ASC_Association* assoc) |
3818 | 71 { |
72 if (position_ >= instances_.size()) | |
73 { | |
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74 throw OrthancException(ErrorCode_ParameterOutOfRange); |
3818 | 75 } |
76 | |
77 const std::string& id = instances_[position_++]; | |
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78 |
3818 | 79 std::string dicom; |
80 context_.ReadDicom(dicom, id); | |
81 | |
4204 | 82 if (dicom.empty()) |
3818 | 83 { |
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84 throw OrthancException(ErrorCode_BadFileFormat); |
3818 | 85 } |
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86 |
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87 std::unique_ptr<DcmFileFormat> parsed( |
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88 FromDcmtkBridge::LoadFromMemoryBuffer(dicom.c_str(), dicom.size())); |
3954 | 89 |
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90 if (parsed.get() == NULL || |
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91 parsed->getDataset() == NULL) |
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93 throw OrthancException(ErrorCode_InternalError); |
3954 | 94 } |
3818 | 95 |
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96 DcmDataset& dataset = *parsed->getDataset(); |
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97 |
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98 OFString a, b; |
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99 if (!dataset.findAndGetOFString(DCM_SOPClassUID, a).good() || |
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100 !dataset.findAndGetOFString(DCM_SOPInstanceUID, b).good()) |
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101 { |
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102 throw OrthancException(ErrorCode_NoSopClassOrInstance, |
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103 "Unable to determine the SOP class/instance for C-STORE with AET " + |
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104 originatorAet_); |
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105 } |
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106 |
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107 std::string sopClassUid(a.c_str()); |
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108 std::string sopInstanceUid(b.c_str()); |
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109 |
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110 return PerformGetSubOp(assoc, sopClassUid, sopInstanceUid, parsed.release()); |
3818 | 111 } |
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112 |
3818 | 113 |
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114 void OrthancGetRequestHandler::AddFailedUIDInstance(const std::string& sopInstance) |
3818 | 115 { |
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116 if (failedUIDs_.empty()) |
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117 { |
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118 failedUIDs_ = sopInstance; |
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119 } |
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120 else |
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121 { |
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122 failedUIDs_ += "\\" + sopInstance; |
3818 | 123 } |
124 } | |
125 | |
126 | |
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127 static bool SelectPresentationContext(T_ASC_PresentationContextID& selectedPresentationId, |
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128 DicomTransferSyntax& selectedSyntax, |
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129 T_ASC_Association* assoc, |
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130 const std::string& sopClassUid, |
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131 DicomTransferSyntax sourceSyntax, |
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132 bool allowTranscoding) |
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133 { |
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134 typedef std::map<DicomTransferSyntax, T_ASC_PresentationContextID> Accepted; |
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135 |
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136 Accepted accepted; |
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137 |
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138 /** |
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139 * 1. Inspect and index all the accepted transfer syntaxes. This |
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140 * is similar to the code from "DicomAssociation::Open()". |
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141 **/ |
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142 |
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143 LST_HEAD **l = &assoc->params->DULparams.acceptedPresentationContext; |
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144 if (*l != NULL) |
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145 { |
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146 DUL_PRESENTATIONCONTEXT* pc = (DUL_PRESENTATIONCONTEXT*) LST_Head(l); |
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147 LST_Position(l, (LST_NODE*)pc); |
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148 while (pc) |
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149 { |
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150 DicomTransferSyntax transferSyntax; |
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151 if (pc->result == ASC_P_ACCEPTANCE && |
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152 LookupTransferSyntax(transferSyntax, pc->acceptedTransferSyntax)) |
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153 { |
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154 /*CLOG(TRACE, DICOM) << "C-GET SCP accepted: SOP class " << pc->abstractSyntax |
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155 << " with transfer syntax " << GetTransferSyntaxUid(transferSyntax);*/ |
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156 if (std::string(pc->abstractSyntax) == sopClassUid) |
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157 { |
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158 accepted[transferSyntax] = pc->presentationContextID; |
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159 } |
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160 } |
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161 else |
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162 { |
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163 CLOG(WARNING, DICOM) << "C-GET: Unknown transfer syntax received: " |
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164 << pc->acceptedTransferSyntax; |
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165 } |
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166 |
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167 pc = (DUL_PRESENTATIONCONTEXT*) LST_Next(l); |
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168 } |
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169 } |
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170 |
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171 |
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172 /** |
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173 * 2. Select the preferred transfer syntaxes, which corresponds to |
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174 * the source transfer syntax, plus all the uncompressed transfer |
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175 * syntaxes if transcoding is enabled. |
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176 **/ |
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177 |
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178 std::list<DicomTransferSyntax> preferred; |
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179 preferred.push_back(sourceSyntax); |
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180 |
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181 if (allowTranscoding) |
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182 { |
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183 if (sourceSyntax != DicomTransferSyntax_LittleEndianImplicit) |
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184 { |
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185 // Default Transfer Syntax for DICOM |
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186 preferred.push_back(DicomTransferSyntax_LittleEndianImplicit); |
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187 } |
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188 |
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189 if (sourceSyntax != DicomTransferSyntax_LittleEndianExplicit) |
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190 { |
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191 preferred.push_back(DicomTransferSyntax_LittleEndianExplicit); |
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192 } |
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193 |
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194 if (sourceSyntax != DicomTransferSyntax_BigEndianExplicit) |
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195 { |
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196 // Retired |
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197 preferred.push_back(DicomTransferSyntax_BigEndianExplicit); |
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198 } |
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199 } |
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200 |
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201 |
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202 /** |
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203 * 3. Lookup whether one of the preferred transfer syntaxes was |
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204 * accepted. |
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205 **/ |
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206 |
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207 for (std::list<DicomTransferSyntax>::const_iterator |
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208 it = preferred.begin(); it != preferred.end(); ++it) |
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209 { |
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210 Accepted::const_iterator found = accepted.find(*it); |
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211 if (found != accepted.end()) |
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212 { |
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213 selectedPresentationId = found->second; |
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214 selectedSyntax = *it; |
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215 return true; |
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216 } |
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217 } |
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218 |
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219 // No preferred syntax was accepted |
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220 return false; |
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221 } |
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222 |
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223 |
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224 bool OrthancGetRequestHandler::PerformGetSubOp(T_ASC_Association* assoc, |
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225 const std::string& sopClassUid, |
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226 const std::string& sopInstanceUid, |
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227 DcmFileFormat* dicomRaw) |
3818 | 228 { |
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229 assert(dicomRaw != NULL); |
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230 std::unique_ptr<DcmFileFormat> dicom(dicomRaw); |
3818 | 231 |
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232 DicomTransferSyntax sourceSyntax; |
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233 if (!FromDcmtkBridge::LookupOrthancTransferSyntax(sourceSyntax, *dicom)) |
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234 { |
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235 failedCount_++; |
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236 AddFailedUIDInstance(sopInstanceUid); |
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237 throw OrthancException(ErrorCode_NetworkProtocol, |
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238 "C-GET SCP: Unknown transfer syntax: (" + |
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239 std::string(dcmSOPClassUIDToModality(sopClassUid.c_str(), "OT")) + |
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240 ") " + sopClassUid); |
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241 } |
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242 |
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243 bool allowTranscoding = (context_.IsTranscodeDicomProtocol() && |
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244 remote_.IsTranscodingAllowed()); |
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245 |
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246 T_ASC_PresentationContextID presId = 0; // Unnecessary initialization, makes code clearer |
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247 DicomTransferSyntax selectedSyntax; |
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248 if (!SelectPresentationContext(presId, selectedSyntax, assoc, sopClassUid, |
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249 sourceSyntax, allowTranscoding) || |
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250 presId == 0) |
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251 { |
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252 failedCount_++; |
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253 AddFailedUIDInstance(sopInstanceUid); |
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254 throw OrthancException(ErrorCode_NetworkProtocol, |
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255 "C-GET SCP: storeSCU: No presentation context for: (" + |
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256 std::string(dcmSOPClassUIDToModality(sopClassUid.c_str(), "OT")) + |
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257 ") " + sopClassUid); |
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258 } |
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259 else |
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260 { |
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261 CLOG(INFO, DICOM) << "C-GET SCP selected transfer syntax " << GetTransferSyntaxUid(selectedSyntax) |
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262 << ", for source instance with SOP class " << sopClassUid |
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263 << " and transfer syntax " << GetTransferSyntaxUid(sourceSyntax); |
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264 |
3818 | 265 // make sure that we can send images in this presentation context |
266 T_ASC_PresentationContext pc; | |
267 ASC_findAcceptedPresentationContext(assoc->params, presId, &pc); | |
268 // the acceptedRole is the association requestor role | |
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269 |
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270 if (pc.acceptedRole != ASC_SC_ROLE_DEFAULT && // "DEFAULT" is necessary for GinkgoCADx |
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271 pc.acceptedRole != ASC_SC_ROLE_SCP && |
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272 pc.acceptedRole != ASC_SC_ROLE_SCUSCP) |
3818 | 273 { |
274 // the role is not appropriate | |
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275 failedCount_++; |
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276 AddFailedUIDInstance(sopInstanceUid); |
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277 throw OrthancException(ErrorCode_NetworkProtocol, |
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278 "C-GET SCP: storeSCU: [No presentation context with requestor SCP role for: (" + |
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279 std::string(dcmSOPClassUIDToModality(sopClassUid.c_str(), "OT")) + |
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280 ") " + sopClassUid); |
3818 | 281 } |
282 } | |
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283 |
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284 const DIC_US msgId = assoc->nextMsgID++; |
3818 | 285 |
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286 T_DIMSE_C_StoreRQ req; |
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287 memset(&req, 0, sizeof(req)); |
3818 | 288 req.MessageID = msgId; |
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289 strncpy(req.AffectedSOPClassUID, sopClassUid.c_str(), DIC_UI_LEN); |
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290 strncpy(req.AffectedSOPInstanceUID, sopInstanceUid.c_str(), DIC_UI_LEN); |
3818 | 291 req.DataSetType = DIMSE_DATASET_PRESENT; |
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292 req.Priority = DIMSE_PRIORITY_MEDIUM; |
3818 | 293 req.opts = 0; |
294 | |
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295 T_DIMSE_C_StoreRSP rsp; |
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296 memset(&rsp, 0, sizeof(rsp)); |
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297 |
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298 CLOG(INFO, DICOM) << "Store SCU RQ: MsgID " << msgId << ", (" |
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299 << dcmSOPClassUIDToModality(sopClassUid.c_str(), "OT") << ")"; |
3818 | 300 |
301 T_DIMSE_DetectedCancelParameters cancelParameters; | |
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302 memset(&cancelParameters, 0, sizeof(cancelParameters)); |
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303 |
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304 std::unique_ptr<DcmDataset> stDetail; |
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305 |
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306 OFCondition cond; |
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307 |
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308 if (sourceSyntax == selectedSyntax) |
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309 { |
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310 // No transcoding is required |
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311 DcmDataset *stDetailTmp = NULL; |
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312 cond = DIMSE_storeUser( |
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313 assoc, presId, &req, NULL /* imageFileName */, dicom->getDataset(), |
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314 ProgressCallback, NULL /* callbackData */, |
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315 (timeout_ > 0 ? DIMSE_NONBLOCKING : DIMSE_BLOCKING), timeout_, |
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316 &rsp, &stDetailTmp, &cancelParameters); |
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317 stDetail.reset(stDetailTmp); |
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318 } |
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319 else |
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320 { |
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321 // Transcoding to the selected uncompressed transfer syntax |
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322 IDicomTranscoder::DicomImage source, transcoded; |
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323 source.AcquireParsed(dicom.release()); |
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324 |
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325 std::set<DicomTransferSyntax> ts; |
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326 ts.insert(selectedSyntax); |
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327 |
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328 if (context_.Transcode(transcoded, source, ts, true)) |
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329 { |
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330 // Transcoding has succeeded |
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331 DcmDataset *stDetailTmp = NULL; |
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332 cond = DIMSE_storeUser( |
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333 assoc, presId, &req, NULL /* imageFileName */, |
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334 transcoded.GetParsed().getDataset(), |
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335 ProgressCallback, NULL /* callbackData */, |
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336 (timeout_ > 0 ? DIMSE_NONBLOCKING : DIMSE_BLOCKING), timeout_, |
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337 &rsp, &stDetailTmp, &cancelParameters); |
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338 stDetail.reset(stDetailTmp); |
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339 } |
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340 else |
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341 { |
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342 // Cannot transcode |
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343 failedCount_++; |
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344 AddFailedUIDInstance(sopInstanceUid); |
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345 throw OrthancException(ErrorCode_NotImplemented, |
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346 "C-GET SCP: Cannot transcode " + sopClassUid + |
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347 " from transfer syntax " + GetTransferSyntaxUid(sourceSyntax) + |
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348 " to " + GetTransferSyntaxUid(selectedSyntax)); |
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349 } |
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350 } |
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351 |
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352 bool isContinue; |
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353 |
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354 if (cond.good()) |
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355 { |
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356 { |
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357 OFString str; |
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358 CLOG(TRACE, DICOM) << "Received Store Response following a C-GET:" << std::endl |
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359 << DIMSE_dumpMessage(str, rsp, DIMSE_INCOMING); |
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360 } |
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361 |
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362 if (cancelParameters.cancelEncountered) |
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363 { |
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364 CLOG(INFO, DICOM) << "C-GET SCP: Received C-Cancel RQ"; |
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365 isContinue = false; |
3818 | 366 } |
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367 else if (rsp.DimseStatus == STATUS_Success) |
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368 { |
3818 | 369 // everything ok |
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370 completedCount_++; |
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371 isContinue = true; |
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372 } |
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373 else if ((rsp.DimseStatus & 0xf000) == 0xb000) |
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374 { |
3818 | 375 // a warning status message |
376 warningCount_++; | |
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377 CLOG(ERROR, DICOM) << "C-GET SCP: Store Warning: Response Status: " |
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378 << DU_cstoreStatusString(rsp.DimseStatus); |
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379 isContinue = true; |
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380 } |
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381 else |
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382 { |
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383 failedCount_++; |
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384 AddFailedUIDInstance(sopInstanceUid); |
3818 | 385 // print a status message |
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386 CLOG(ERROR, DICOM) << "C-GET SCP: Store Failed: Response Status: " |
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387 << DU_cstoreStatusString(rsp.DimseStatus); |
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388 isContinue = true; |
3818 | 389 } |
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390 } |
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391 else |
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392 { |
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393 failedCount_++; |
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394 AddFailedUIDInstance(sopInstanceUid); |
3818 | 395 OFString temp_str; |
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396 CLOG(ERROR, DICOM) << "C-GET SCP: storeSCU: Store Request Failed: " |
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397 << DimseCondition::dump(temp_str, cond); |
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398 isContinue = true; |
3818 | 399 } |
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400 |
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401 if (stDetail.get() != NULL) |
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402 { |
3963 | 403 // It is impossible to directly use the "<<" stream construct |
404 // with "DcmObject::PrintHelper" using MSVC2008 | |
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405 std::stringstream s; |
3963 | 406 DcmObject::PrintHelper obj(*stDetail); |
407 obj.dcmobj_.print(s); | |
408 | |
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409 CLOG(INFO, DICOM) << " Status Detail: " << s.str(); |
3818 | 410 } |
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411 |
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412 return isContinue; |
3818 | 413 } |
414 | |
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415 bool OrthancGetRequestHandler::LookupIdentifiers(std::list<std::string>& publicIds, |
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416 ResourceType level, |
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417 const DicomMap& input) const |
3818 | 418 { |
419 DicomTag tag(0, 0); // Dummy initialization | |
420 | |
421 switch (level) | |
422 { | |
423 case ResourceType_Patient: | |
424 tag = DICOM_TAG_PATIENT_ID; | |
425 break; | |
426 | |
427 case ResourceType_Study: | |
428 tag = (input.HasTag(DICOM_TAG_ACCESSION_NUMBER) ? | |
429 DICOM_TAG_ACCESSION_NUMBER : DICOM_TAG_STUDY_INSTANCE_UID); | |
430 break; | |
431 | |
432 case ResourceType_Series: | |
433 tag = DICOM_TAG_SERIES_INSTANCE_UID; | |
434 break; | |
435 | |
436 case ResourceType_Instance: | |
437 tag = DICOM_TAG_SOP_INSTANCE_UID; | |
438 break; | |
439 | |
440 default: | |
441 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
442 } | |
443 | |
444 if (!input.HasTag(tag)) | |
445 { | |
446 return false; | |
447 } | |
448 | |
449 const DicomValue& value = input.GetValue(tag); | |
450 if (value.IsNull() || | |
451 value.IsBinary()) | |
452 { | |
453 return false; | |
454 } | |
455 else | |
456 { | |
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457 std::vector<std::string> tokens; |
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458 Toolbox::TokenizeString(tokens, value.GetContent(), '\\'); |
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459 |
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460 for (size_t i = 0; i < tokens.size(); i++) |
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461 { |
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462 std::vector<std::string> tmp; |
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463 context_.GetIndex().LookupIdentifierExact(tmp, level, tag, tokens[i]); |
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464 |
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465 if (tmp.empty()) |
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466 { |
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467 CLOG(ERROR, DICOM) << "C-GET: Cannot locate resource \"" << tokens[i] |
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468 << "\" at the " << EnumerationToString(level) << " level"; |
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469 return false; |
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470 } |
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471 else |
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472 { |
4204 | 473 for (size_t j = 0; j < tmp.size(); j++) |
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474 { |
4204 | 475 publicIds.push_back(tmp[j]); |
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476 } |
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477 } |
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478 } |
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479 |
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480 return true; |
3818 | 481 } |
482 } | |
483 | |
484 | |
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485 OrthancGetRequestHandler::OrthancGetRequestHandler(ServerContext& context) : |
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486 context_(context) |
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487 { |
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488 position_ = 0; |
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489 completedCount_ = 0; |
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490 warningCount_ = 0; |
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491 failedCount_ = 0; |
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492 timeout_ = 0; |
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493 } |
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494 |
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495 |
3818 | 496 bool OrthancGetRequestHandler::Handle(const DicomMap& input, |
497 const std::string& originatorIp, | |
498 const std::string& originatorAet, | |
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499 const std::string& calledAet, |
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500 uint32_t timeout) |
3818 | 501 { |
502 MetricsRegistry::Timer timer(context_.GetMetricsRegistry(), "orthanc_get_scp_duration_ms"); | |
503 | |
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504 CLOG(WARNING, DICOM) << "C-GET-SCU request received from AET \"" << originatorAet << "\""; |
3818 | 505 |
506 { | |
507 DicomArray query(input); | |
508 for (size_t i = 0; i < query.GetSize(); i++) | |
509 { | |
510 if (!query.GetElement(i).GetValue().IsNull()) | |
511 { | |
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512 CLOG(INFO, DICOM) << " " << query.GetElement(i).GetTag() |
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513 << " " << FromDcmtkBridge::GetTagName(query.GetElement(i)) |
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514 << " = " << query.GetElement(i).GetValue().GetContent(); |
3818 | 515 } |
516 } | |
517 } | |
518 | |
519 /** | |
520 * Retrieve the query level. | |
521 **/ | |
522 | |
523 const DicomValue* levelTmp = input.TestAndGetValue(DICOM_TAG_QUERY_RETRIEVE_LEVEL); | |
524 | |
525 assert(levelTmp != NULL); | |
526 ResourceType level = StringToResourceType(levelTmp->GetContent().c_str()); | |
527 | |
528 | |
529 /** | |
530 * Lookup for the resource to be sent. | |
531 **/ | |
532 | |
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533 std::list<std::string> publicIds; |
3818 | 534 |
3954 | 535 if (!LookupIdentifiers(publicIds, level, input)) |
536 { | |
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537 CLOG(ERROR, DICOM) << "Cannot determine what resources are requested by C-GET"; |
3954 | 538 return false; |
539 } | |
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540 |
3818 | 541 localAet_ = context_.GetDefaultLocalApplicationEntityTitle(); |
542 position_ = 0; | |
543 originatorAet_ = originatorAet; | |
544 | |
545 { | |
546 OrthancConfiguration::ReaderLock lock; | |
547 remote_ = lock.GetConfiguration().GetModalityUsingAet(originatorAet); | |
548 } | |
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549 |
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550 for (std::list<std::string>::const_iterator |
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551 resource = publicIds.begin(); resource != publicIds.end(); ++resource) |
3818 | 552 { |
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553 CLOG(INFO, DICOM) << "C-GET: Sending resource " << *resource |
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554 << " to modality \"" << originatorAet << "\""; |
3818 | 555 |
556 std::list<std::string> tmp; | |
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557 context_.GetIndex().GetChildInstances(tmp, *resource); |
3818 | 558 |
559 instances_.reserve(tmp.size()); | |
560 for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it) | |
561 { | |
562 instances_.push_back(*it); | |
563 } | |
564 } | |
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565 |
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566 failedUIDs_.clear(); |
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567 |
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568 completedCount_ = 0; |
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569 failedCount_ = 0; |
3818 | 570 warningCount_ = 0; |
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571 timeout_ = timeout; |
3818 | 572 |
3954 | 573 return true; |
3818 | 574 } |
575 }; |