annotate OrthancFramework/Sources/DicomParsing/DicomModification.cpp @ 4677:521e39b3f2c0

Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 03 Jun 2021 21:06:34 +0200
parents caf963ee3de9
children 2e850edf03d6
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1818
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1279
diff changeset
4 * Department, University Hospital of Liege, Belgium
4437
d9473bd5ed43 upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4313
diff changeset
5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
8 * modify it under the terms of the GNU Lesser General Public License
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
10 * the License, or (at your option) any later version.
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
15 * Lesser General Public License for more details.
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 *
4119
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
17 * You should have received a copy of the GNU Lesser General Public
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
18 * License along with this program. If not, see
bf7b9edf6b81 re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
19 * <http://www.gnu.org/licenses/>.
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 **/
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2323
diff changeset
23 #include "../PrecompiledHeaders.h"
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 #include "DicomModification.h"
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
26 #include "../Compatibility.h"
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2323
diff changeset
27 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2323
diff changeset
28 #include "../OrthancException.h"
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
29 #include "../SerializationToolbox.h"
790
331eaf9d9d69 ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 789
diff changeset
30 #include "FromDcmtkBridge.h"
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
31 #include "ITagVisitor.h"
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
33 #include <memory> // For std::unique_ptr
795
d466b3606aca refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 790
diff changeset
34
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
35
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
36 static const std::string ORTHANC_DEIDENTIFICATION_METHOD_2008 =
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
37 "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1";
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
38
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
39 static const std::string ORTHANC_DEIDENTIFICATION_METHOD_2017c =
2314
c54c9523adf8 add basic profile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2313
diff changeset
40 "Orthanc " ORTHANC_VERSION " - PS 3.15-2017c Table E.1-1 Basic Profile";
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
41
4677
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
42 static const std::string ORTHANC_DEIDENTIFICATION_METHOD_2021b =
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
43 "Orthanc " ORTHANC_VERSION " - PS 3.15-2021b Table E.1-1 Basic Profile";
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
44
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 namespace Orthanc
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46 {
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
47 class DicomModification::RelationshipsVisitor : public ITagVisitor
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
48 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
49 private:
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
50 DicomModification& that_;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
51
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
52 bool IsEnabled(const DicomTag& tag) const
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
53 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
54 return (!that_.IsCleared(tag) &&
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
55 !that_.IsRemoved(tag) &&
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
56 !that_.IsReplaced(tag));
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
57 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
58
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
59 void RemoveIfEnabled(ParsedDicomFile& dicom,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
60 const DicomTag& tag) const
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
61 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
62 if (IsEnabled(tag))
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
63 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
64 dicom.Remove(tag);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
65 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
66 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
67
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
68
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
69 public:
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
70 explicit RelationshipsVisitor(DicomModification& that) :
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
71 that_(that)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
72 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
73 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
74
3195
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
75 virtual void VisitNotSupported(const std::vector<DicomTag>& parentTags,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
76 const std::vector<size_t>& parentIndexes,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
77 const DicomTag& tag,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
78 ValueRepresentation vr)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
79 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
80 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
81
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
82 virtual void VisitEmptySequence(const std::vector<DicomTag>& parentTags,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
83 const std::vector<size_t>& parentIndexes,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3194
diff changeset
84 const DicomTag& tag)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
85 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
86 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
87
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
88 virtual void VisitBinary(const std::vector<DicomTag>& parentTags,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
89 const std::vector<size_t>& parentIndexes,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
90 const DicomTag& tag,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
91 ValueRepresentation vr,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
92 const void* data,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
93 size_t size)
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
94 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
95 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
96
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
97 virtual void VisitIntegers(const std::vector<DicomTag>& parentTags,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
98 const std::vector<size_t>& parentIndexes,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
99 const DicomTag& tag,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
100 ValueRepresentation vr,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
101 const std::vector<int64_t>& values)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
102 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
103 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
104
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
105 virtual void VisitDoubles(const std::vector<DicomTag>& parentTags,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
106 const std::vector<size_t>& parentIndexes,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
107 const DicomTag& tag,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
108 ValueRepresentation vr,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
109 const std::vector<double>& value)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
110 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
111 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
112
3194
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
113 virtual void VisitAttributes(const std::vector<DicomTag>& parentTags,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
114 const std::vector<size_t>& parentIndexes,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
115 const DicomTag& tag,
47ef29168698 support of value multiplicity in ITagVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
116 const std::vector<DicomTag>& value)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
117 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
118 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
119
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
120 virtual Action VisitString(std::string& newValue,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
121 const std::vector<DicomTag>& parentTags,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
122 const std::vector<size_t>& parentIndexes,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
123 const DicomTag& tag,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
124 ValueRepresentation vr,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
125 const std::string& value)
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
126 {
2521
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
127 if (!IsEnabled(tag))
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
128 {
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
129 return Action_None;
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
130 }
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
131 else if (parentTags.size() == 2 &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
132 parentTags[0] == DICOM_TAG_REFERENCED_FRAME_OF_REFERENCE_SEQUENCE &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
133 parentTags[1] == DICOM_TAG_RT_REFERENCED_STUDY_SEQUENCE &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
134 tag == DICOM_TAG_REFERENCED_SOP_INSTANCE_UID)
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
135 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
136 // in RT-STRUCT, this ReferencedSOPInstanceUID is actually referencing a StudyInstanceUID !!
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
137 // (observed in many data sets including: https://wiki.cancerimagingarchive.net/display/Public/Lung+CT+Segmentation+Challenge+2017)
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
138 // tested in test_anonymize_relationships_5
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
139 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Study);
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
140 return Action_Replace;
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
141 }
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
142 else if (tag == DICOM_TAG_FRAME_OF_REFERENCE_UID ||
2521
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
143 tag == DICOM_TAG_REFERENCED_FRAME_OF_REFERENCE_UID ||
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
144 tag == DICOM_TAG_REFERENCED_SOP_INSTANCE_UID ||
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
145 tag == DICOM_TAG_RELATED_FRAME_OF_REFERENCE_UID)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
146 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
147 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Instance);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
148 return Action_Replace;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
149 }
2521
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
150 else if (parentTags.size() == 1 &&
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
151 parentTags[0] == DICOM_TAG_CURRENT_REQUESTED_PROCEDURE_EVIDENCE_SEQUENCE &&
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
152 tag == DICOM_TAG_STUDY_INSTANCE_UID)
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
153 {
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
154 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Study);
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
155 return Action_Replace;
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
156 }
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
157 else if (parentTags.size() == 2 &&
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
158 parentTags[0] == DICOM_TAG_CURRENT_REQUESTED_PROCEDURE_EVIDENCE_SEQUENCE &&
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
159 parentTags[1] == DICOM_TAG_REFERENCED_SERIES_SEQUENCE &&
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
160 tag == DICOM_TAG_SERIES_INSTANCE_UID)
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
161 {
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
162 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Series);
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
163 return Action_Replace;
6db878376018 support anonymization of CurrentRequestedProcedureEvidenceSequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2520
diff changeset
164 }
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
165 else if (parentTags.size() == 3 &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
166 parentTags[0] == DICOM_TAG_REFERENCED_FRAME_OF_REFERENCE_SEQUENCE &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
167 parentTags[1] == DICOM_TAG_RT_REFERENCED_STUDY_SEQUENCE &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
168 parentTags[2] == DICOM_TAG_RT_REFERENCED_SERIES_SEQUENCE &&
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
169 tag == DICOM_TAG_SERIES_INSTANCE_UID)
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
170 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
171 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Series);
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
172 return Action_Replace;
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
173 }
3344
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
174 else if (parentTags.size() == 1 &&
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
175 parentTags[0] == DICOM_TAG_REFERENCED_SERIES_SEQUENCE &&
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
176 tag == DICOM_TAG_SERIES_INSTANCE_UID)
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
177 {
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
178 newValue = that_.MapDicomIdentifier(Toolbox::StripSpaces(value), ResourceType_Series);
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
179 return Action_Replace;
90b4a5001c24 Anonymization: Preserve hierarchical relationships in (0008,1115) [] (0020,000e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3195
diff changeset
180 }
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
181 else
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
182 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
183 return Action_None;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
184 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
185 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
186
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
187 void RemoveRelationships(ParsedDicomFile& dicom) const
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
188 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
189 // Sequences containing the UID relationships
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
190 RemoveIfEnabled(dicom, DICOM_TAG_REFERENCED_IMAGE_SEQUENCE);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
191 RemoveIfEnabled(dicom, DICOM_TAG_SOURCE_IMAGE_SEQUENCE);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
192
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
193 // Individual tags
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
194 RemoveIfEnabled(dicom, DICOM_TAG_FRAME_OF_REFERENCE_UID);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
195
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
196 // The tags below should never occur at the first level of the
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
197 // hierarchy, but remove them anyway
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
198 RemoveIfEnabled(dicom, DICOM_TAG_REFERENCED_FRAME_OF_REFERENCE_UID);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
199 RemoveIfEnabled(dicom, DICOM_TAG_REFERENCED_SOP_INSTANCE_UID);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
200 RemoveIfEnabled(dicom, DICOM_TAG_RELATED_FRAME_OF_REFERENCE_UID);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
201 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
202 };
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
203
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
204
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
205 bool DicomModification::CancelReplacement(const DicomTag& tag)
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
206 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
207 Replacements::iterator it = replacements_.find(tag);
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
208
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
209 if (it != replacements_.end())
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
210 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
211 delete it->second;
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
212 replacements_.erase(it);
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
213 return true;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
214 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
215 else
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
216 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
217 return false;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
218 }
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
219 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
220
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
221
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
222 void DicomModification::ReplaceInternal(const DicomTag& tag,
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
223 const Json::Value& value)
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
224 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
225 Replacements::iterator it = replacements_.find(tag);
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
226
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
227 if (it != replacements_.end())
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
228 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
229 delete it->second;
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
230 it->second = NULL; // In the case of an exception during the clone
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
231 it->second = new Json::Value(value); // Clone
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
232 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
233 else
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
234 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
235 replacements_[tag] = new Json::Value(value); // Clone
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
236 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
237 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
238
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
239
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
240 void DicomModification::ClearReplacements()
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
241 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
242 for (Replacements::iterator it = replacements_.begin();
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
243 it != replacements_.end(); ++it)
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
244 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
245 delete it->second;
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
246 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
247
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
248 replacements_.clear();
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
249 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
250
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
251
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
252 void DicomModification::MarkNotOrthancAnonymization()
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
253 {
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
254 Replacements::iterator it = replacements_.find(DICOM_TAG_DEIDENTIFICATION_METHOD);
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
255
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
256 if (it != replacements_.end() &&
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
257 (it->second->asString() == ORTHANC_DEIDENTIFICATION_METHOD_2008 ||
4677
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
258 it->second->asString() == ORTHANC_DEIDENTIFICATION_METHOD_2017c ||
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
259 it->second->asString() == ORTHANC_DEIDENTIFICATION_METHOD_2021b))
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
260 {
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
261 delete it->second;
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
262 replacements_.erase(it);
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
263 }
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
264 }
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
265
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
266 void DicomModification::RegisterMappedDicomIdentifier(const std::string& original,
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
267 const std::string& mapped,
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
268 ResourceType level)
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
269 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
270 UidMap::const_iterator previous = uidMap_.find(std::make_pair(level, original));
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
271
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
272 if (previous == uidMap_.end())
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
273 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
274 uidMap_.insert(std::make_pair(std::make_pair(level, original), mapped));
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
275 }
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
276 }
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
277
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
278 std::string DicomModification::MapDicomIdentifier(const std::string& original,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
279 ResourceType level)
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
280 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
281 std::string mapped;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
282
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
283 UidMap::const_iterator previous = uidMap_.find(std::make_pair(level, original));
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
284
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
285 if (previous == uidMap_.end())
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
286 {
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
287 if (identifierGenerator_ == NULL)
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
288 {
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
289 mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level);
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
290 }
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
291 else
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
292 {
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
293 if (!identifierGenerator_->Apply(mapped, original, level, currentSource_))
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
294 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
295 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
296 "Unable to generate an anonymized ID");
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
297 }
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
298 }
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
299
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
300 uidMap_.insert(std::make_pair(std::make_pair(level, original), mapped));
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
301 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
302 else
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
303 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
304 mapped = previous->second;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
305 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
306
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
307 return mapped;
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
308 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
309
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
310
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
311 void DicomModification::MapDicomTags(ParsedDicomFile& dicom,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
312 ResourceType level)
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
313 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
314 std::unique_ptr<DicomTag> tag;
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
316 switch (level)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
317 {
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
318 case ResourceType_Study:
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 break;
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
322 case ResourceType_Series:
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
323 tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
324 break;
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
326 case ResourceType_Instance:
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
327 tag.reset(new DicomTag(DICOM_TAG_SOP_INSTANCE_UID));
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
328 break;
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
329
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
330 default:
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
331 throw OrthancException(ErrorCode_InternalError);
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334 std::string original;
4273
0034f855c023 tuning log categories from command-line, and binary compat with orthanc framework 1.7.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
335 if (!const_cast<const ParsedDicomFile&>(dicom).GetTagValue(original, *tag))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
337 original = "";
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
339
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
340 std::string mapped = MapDicomIdentifier(Toolbox::StripSpaces(original), level);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
341
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
342 dicom.Replace(*tag, mapped,
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
343 false /* don't try and decode data URI scheme for UIDs */,
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
344 DicomReplaceMode_InsertIfAbsent, privateCreator_);
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
345 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
346
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
347
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
348 DicomModification::DicomModification() :
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
349 removePrivateTags_(false),
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
350 level_(ResourceType_Instance),
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
351 allowManualIdentifiers_(true),
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
352 keepStudyInstanceUid_(false),
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
353 keepSeriesInstanceUid_(false),
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
354 keepSopInstanceUid_(false),
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
355 updateReferencedRelationships_(true),
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
356 isAnonymization_(false),
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
357 //privateCreator_("PrivateCreator"),
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
358 identifierGenerator_(NULL)
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
362 DicomModification::~DicomModification()
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
363 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
364 ClearReplacements();
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
365 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
366
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 786
diff changeset
367 void DicomModification::Keep(const DicomTag& tag)
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368 {
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
369 bool wasRemoved = IsRemoved(tag);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
370 bool wasCleared = IsCleared(tag);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
371
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 removals_.erase(tag);
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
373 clearings_.erase(tag);
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
374
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
375 bool wasReplaced = CancelReplacement(tag);
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 916
diff changeset
376
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
377 if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
378 {
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
379 keepStudyInstanceUid_ = true;
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
380 }
2321
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
381 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
382 {
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
383 keepSeriesInstanceUid_ = true;
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
384 }
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
385 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
386 {
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
387 keepSopInstanceUid_ = true;
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
388 }
2321
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
389 else if (tag.IsPrivate())
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
390 {
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
391 privateTagsToKeep_.insert(tag);
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
392 }
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
393 else if (!wasRemoved &&
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
394 !wasReplaced &&
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
395 !wasCleared)
2321
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
396 {
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
397 LOG(WARNING) << "Marking this tag as to be kept has no effect: " << tag.Format();
65ffba10cace warning message in DicomModification::Keep()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2314
diff changeset
398 }
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
399
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
400 MarkNotOrthancAnonymization();
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
401 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
402
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
403 void DicomModification::Remove(const DicomTag& tag)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
404 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405 removals_.insert(tag);
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
406 clearings_.erase(tag);
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
407 CancelReplacement(tag);
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
408 privateTagsToKeep_.erase(tag);
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
409
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
410 MarkNotOrthancAnonymization();
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
411 }
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
412
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
413 void DicomModification::Clear(const DicomTag& tag)
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
414 {
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
415 removals_.erase(tag);
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
416 clearings_.insert(tag);
2323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2321
diff changeset
417 CancelReplacement(tag);
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 916
diff changeset
418 privateTagsToKeep_.erase(tag);
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
419
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
420 MarkNotOrthancAnonymization();
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
421 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
422
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
423 bool DicomModification::IsRemoved(const DicomTag& tag) const
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
424 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
425 return removals_.find(tag) != removals_.end();
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
426 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
427
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
428 bool DicomModification::IsCleared(const DicomTag& tag) const
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
429 {
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
430 return clearings_.find(tag) != clearings_.end();
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
431 }
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
432
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
433 void DicomModification::Replace(const DicomTag& tag,
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
434 const Json::Value& value,
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
435 bool safeForAnonymization)
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
436 {
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
437 clearings_.erase(tag);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
438 removals_.erase(tag);
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 916
diff changeset
439 privateTagsToKeep_.erase(tag);
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
440 ReplaceInternal(tag, value);
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
441
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
442 if (!safeForAnonymization)
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
443 {
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
444 MarkNotOrthancAnonymization();
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
445 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
446 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
447
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
448
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
449 bool DicomModification::IsReplaced(const DicomTag& tag) const
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 return replacements_.find(tag) != replacements_.end();
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
452 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
453
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
454 const Json::Value& DicomModification::GetReplacement(const DicomTag& tag) const
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
455 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
456 Replacements::const_iterator it = replacements_.find(tag);
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
457
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458 if (it == replacements_.end())
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
460 throw OrthancException(ErrorCode_InexistentItem);
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
462 else
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
463 {
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
464 return *it->second;
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
465 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
466 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
467
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
468
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
469 std::string DicomModification::GetReplacementAsString(const DicomTag& tag) const
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
470 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
471 const Json::Value& json = GetReplacement(tag);
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
472
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
473 if (json.type() != Json::stringValue)
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
474 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
475 throw OrthancException(ErrorCode_BadParameterType);
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
476 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
477 else
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
478 {
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
479 return json.asString();
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
480 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
481 }
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
482
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
483
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
484 void DicomModification::SetRemovePrivateTags(bool removed)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
485 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
486 removePrivateTags_ = removed;
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
487
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
488 if (!removed)
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
489 {
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
490 MarkNotOrthancAnonymization();
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
491 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
492 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
493
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
494 bool DicomModification::ArePrivateTagsRemoved() const
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
495 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
496 return removePrivateTags_;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
497 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
498
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
499 void DicomModification::SetLevel(ResourceType level)
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
500 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
501 uidMap_.clear();
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
502 level_ = level;
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
503
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
504 if (level != ResourceType_Patient)
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
505 {
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
506 MarkNotOrthancAnonymization();
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
507 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
508 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
509
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
510 ResourceType DicomModification::GetLevel() const
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
511 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
512 return level_;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
513 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
514
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
515
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
516 void DicomModification::SetupAnonymization2008()
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
517 {
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
518 // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
519 // https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
520
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
521 removals_.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
522 //removals_.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set in Apply()
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
523 removals_.insert(DicomTag(0x0008, 0x0050)); // Accession Number
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
524 removals_.insert(DicomTag(0x0008, 0x0080)); // Institution Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
525 removals_.insert(DicomTag(0x0008, 0x0081)); // Institution Address
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
526 removals_.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
527 removals_.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
528 removals_.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
529 removals_.insert(DicomTag(0x0008, 0x1010)); // Station Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
530 removals_.insert(DicomTag(0x0008, 0x1030)); // Study Description
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
531 removals_.insert(DicomTag(0x0008, 0x103e)); // Series Description
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
532 removals_.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
533 removals_.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
534 removals_.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
535 removals_.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
536 removals_.insert(DicomTag(0x0008, 0x1070)); // Operators' Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
537 removals_.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
538 //removals_.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID => RelationshipsVisitor
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
539 removals_.insert(DicomTag(0x0008, 0x2111)); // Derivation Description
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
540 //removals_.insert(DicomTag(0x0010, 0x0010)); // Patient's Name => cf. below (*)
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
541 //removals_.insert(DicomTag(0x0010, 0x0020)); // Patient ID => cf. below (*)
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
542 removals_.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
543 removals_.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
544 removals_.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
545 removals_.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
546 removals_.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
547 removals_.insert(DicomTag(0x0010, 0x1010)); // Patient's Age
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
548 removals_.insert(DicomTag(0x0010, 0x1020)); // Patient's Size
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
549 removals_.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
550 removals_.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
551 removals_.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
552 removals_.insert(DicomTag(0x0010, 0x2180)); // Occupation
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
553 removals_.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
554 removals_.insert(DicomTag(0x0010, 0x4000)); // Patient Comments
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
555 removals_.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
556 removals_.insert(DicomTag(0x0018, 0x1030)); // Protocol Name
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
557 //removals_.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => set in Apply()
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
558 //removals_.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => set in Apply()
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
559 removals_.insert(DicomTag(0x0020, 0x0010)); // Study ID
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
560 //removals_.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID => cf. RelationshipsVisitor
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
561 removals_.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
562 removals_.insert(DicomTag(0x0020, 0x4000)); // Image Comments
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
563 removals_.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
564 removals_.insert(DicomTag(0x0040, 0xa124)); // UID
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
565 removals_.insert(DicomTag(0x0040, 0xa730)); // Content Sequence
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
566 removals_.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
567 //removals_.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID => RelationshipsVisitor
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
568 //removals_.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID => RelationshipsVisitor
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
569
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
570 // Some more removals (from the experience of DICOM files at the CHU of Liege)
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
571 removals_.insert(DicomTag(0x0010, 0x1040)); // Patient's Address
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
572 removals_.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
573 removals_.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
574 removals_.insert(DicomTag(0x0010, 0x2000)); // Medical Alerts
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
575
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
576 // Set the DeidentificationMethod tag
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
577 ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2008);
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
578 }
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
579
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
580
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
581 void DicomModification::SetupAnonymization2017c()
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
582 {
2313
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
583 /**
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
584 * This is Table E.1-1 from PS 3.15-2017c (DICOM Part 15: Security
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
585 * and System Management Profiles), "basic profile" column. It was
4675
7e4d1f2b3a8f GenerateAnonymizationProfile.py can read from URL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
586 * generated automatically by calling:
7e4d1f2b3a8f GenerateAnonymizationProfile.py can read from URL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
587 * "../../../OrthancServer/Resources/GenerateAnonymizationProfile.py
7e4d1f2b3a8f GenerateAnonymizationProfile.py can read from URL
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
588 * https://raw.githubusercontent.com/jodogne/dicom-specification/master/2017c/part15.xml"
2313
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
589 **/
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
590
4676
caf963ee3de9 DicomModification_Anonymization2017c.impl.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4675
diff changeset
591 #include "DicomModification_Anonymization2017c.impl.h"
2313
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
592
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
593 // Set the DeidentificationMethod tag
d19e716b79fa switch to anonymization according to DICOM 2017c
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2311
diff changeset
594 ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2017c);
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
595 }
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
596
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
597
4677
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
598 void DicomModification::SetupAnonymization2021b()
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
599 {
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
600 /**
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
601 * This is Table E.1-1 from PS 3.15-2021b (DICOM Part 15: Security
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
602 * and System Management Profiles), "basic profile" column. It was
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
603 * generated automatically by calling:
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
604 * "../../../OrthancServer/Resources/GenerateAnonymizationProfile.py
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
605 * https://raw.githubusercontent.com/jodogne/dicom-specification/master/2021b/part15.xml"
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
606 *
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
607 * http://dicom.nema.org/medical/dicom/2021b/output/chtml/part15/chapter_E.html#table_E.1-1a
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
608 * http://dicom.nema.org/medical/dicom/2021b/output/chtml/part15/chapter_E.html#table_E.1-1
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
609 **/
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
610
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
611 #include "DicomModification_Anonymization2021b.impl.h"
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
612
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
613 // Set the DeidentificationMethod tag
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
614 ReplaceInternal(DICOM_TAG_DEIDENTIFICATION_METHOD, ORTHANC_DEIDENTIFICATION_METHOD_2021b);
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
615 }
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
616
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
617
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
618 void DicomModification::SetupAnonymization(DicomVersion version)
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
619 {
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
620 isAnonymization_ = true;
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
621
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
622 removals_.clear();
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
623 clearings_.clear();
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
624 ClearReplacements();
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
625 removePrivateTags_ = true;
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
626 level_ = ResourceType_Patient;
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
627 uidMap_.clear();
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
628 privateTagsToKeep_.clear();
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
629
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
630 switch (version)
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
631 {
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
632 case DicomVersion_2008:
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
633 SetupAnonymization2008();
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
634 break;
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
635
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
636 case DicomVersion_2017c:
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
637 SetupAnonymization2017c();
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
638 break;
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
639
4677
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
640 case DicomVersion_2021b:
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
641 SetupAnonymization2021b();
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
642 break;
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
643
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
644 default:
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
645 throw OrthancException(ErrorCode_ParameterOutOfRange);
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2277
diff changeset
646 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
647
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
648 // Set the PatientIdentityRemoved tag
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
649 ReplaceInternal(DicomTag(0x0012, 0x0062), "YES");
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
650
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
651 // (*) Choose a random patient name and ID
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
652 std::string patientId = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Patient);
1698
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
653 ReplaceInternal(DICOM_TAG_PATIENT_ID, patientId);
d78b87f93bcf DicomModification use Json::Value
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
654 ReplaceInternal(DICOM_TAG_PATIENT_NAME, patientId);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
655 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
656
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
657 void DicomModification::Apply(ParsedDicomFile& toModify)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
658 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
659 // Check the request
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
660 assert(ResourceType_Patient + 1 == ResourceType_Study &&
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
661 ResourceType_Study + 1 == ResourceType_Series &&
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
662 ResourceType_Series + 1 == ResourceType_Instance);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
663
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
664 if (IsRemoved(DICOM_TAG_PATIENT_ID) ||
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
665 IsRemoved(DICOM_TAG_STUDY_INSTANCE_UID) ||
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
666 IsRemoved(DICOM_TAG_SERIES_INSTANCE_UID) ||
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
667 IsRemoved(DICOM_TAG_SOP_INSTANCE_UID))
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
668 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
669 throw OrthancException(ErrorCode_BadRequest);
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
670 }
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
671
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
672
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
673 // Sanity checks at the patient level
788
7ebe4bf87196 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 787
diff changeset
674 if (level_ == ResourceType_Patient && !IsReplaced(DICOM_TAG_PATIENT_ID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
675 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
676 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
677 "When modifying a patient, her PatientID is required to be modified");
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
678 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
679
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
680 if (!allowManualIdentifiers_)
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
681 {
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
682 if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
683 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
684 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
685 "When modifying a patient, the StudyInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
686 }
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
687
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
688 if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
689 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
690 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
691 "When modifying a patient, the SeriesInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
692 }
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
693
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
694 if (level_ == ResourceType_Patient && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
695 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
696 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
697 "When modifying a patient, the SopInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
698 }
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
699 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
700
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
701
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
702 // Sanity checks at the study level
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
703 if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_PATIENT_ID))
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
704 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
705 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
706 "When modifying a study, the parent PatientID cannot be manually modified");
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
707 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
708
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
709 if (!allowManualIdentifiers_)
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
710 {
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
711 if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
712 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
713 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
714 "When modifying a study, the SeriesInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
715 }
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
716
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
717 if (level_ == ResourceType_Study && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
718 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
719 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
720 "When modifying a study, the SopInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
721 }
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
722 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
723
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
724
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
725 // Sanity checks at the series level
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
726 if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_PATIENT_ID))
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
727 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
728 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
729 "When modifying a series, the parent PatientID cannot be manually modified");
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
730 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
731
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
732 if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
733 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
734 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
735 "When modifying a series, the parent StudyInstanceUID cannot be manually modified");
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
736 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
737
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
738 if (!allowManualIdentifiers_)
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
739 {
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
740 if (level_ == ResourceType_Series && IsReplaced(DICOM_TAG_SOP_INSTANCE_UID))
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
741 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
742 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
743 "When modifying a series, the SopInstanceUID cannot be manually modified");
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
744 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
745 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
746
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
747
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
748 // Sanity checks at the instance level
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
749 if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_PATIENT_ID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
750 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
751 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
752 "When modifying an instance, the parent PatientID cannot be manually modified");
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
753 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
754
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
755 if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
756 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
757 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
758 "When modifying an instance, the parent StudyInstanceUID cannot be manually modified");
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
759 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
760
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
761 if (level_ == ResourceType_Instance && IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
762 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
763 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
764 "When modifying an instance, the parent SeriesInstanceUID cannot be manually modified");
1160
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
765 }
80671157d051 generalization of create-dicom
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 991
diff changeset
766
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
767 // (0) Create a summary of the source file, if a custom generator
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
768 // is provided
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
769 if (identifierGenerator_ != NULL)
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
770 {
4139
a4f28efdfccf "maxTagLength" must be explicitly given to ParsedDicomFile::ExtractDicomSummary()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
771 toModify.ExtractDicomSummary(currentSource_, ORTHANC_MAXIMUM_TAG_LENGTH);
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
772 }
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
773
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
774 // (1) Make sure the relationships are updated with the ids that we force too
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
775 // i.e: an RT-STRUCT is referencing its own StudyInstanceUID
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
776 if (isAnonymization_ && updateReferencedRelationships_)
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
777 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
778 if (IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
779 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
780 std::string original;
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
781 std::string replacement = GetReplacementAsString(DICOM_TAG_STUDY_INSTANCE_UID);
4273
0034f855c023 tuning log categories from command-line, and binary compat with orthanc framework 1.7.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
782 const_cast<const ParsedDicomFile&>(toModify).GetTagValue(original, DICOM_TAG_STUDY_INSTANCE_UID);
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
783 RegisterMappedDicomIdentifier(original, replacement, ResourceType_Study);
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
784 }
2535
d3476d90dcb7 DicomModification::SetDicomIdentifierGenerator()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
785
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
786 if (IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
787 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
788 std::string original;
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
789 std::string replacement = GetReplacementAsString(DICOM_TAG_SERIES_INSTANCE_UID);
4273
0034f855c023 tuning log categories from command-line, and binary compat with orthanc framework 1.7.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
790 const_cast<const ParsedDicomFile&>(toModify).GetTagValue(original, DICOM_TAG_SERIES_INSTANCE_UID);
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
791 RegisterMappedDicomIdentifier(original, replacement, ResourceType_Series);
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
792 }
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
793
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
794 if (IsReplaced(DICOM_TAG_SOP_INSTANCE_UID))
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
795 {
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
796 std::string original;
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
797 std::string replacement = GetReplacementAsString(DICOM_TAG_SOP_INSTANCE_UID);
4273
0034f855c023 tuning log categories from command-line, and binary compat with orthanc framework 1.7.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
798 const_cast<const ParsedDicomFile&>(toModify).GetTagValue(original, DICOM_TAG_SOP_INSTANCE_UID);
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
799 RegisterMappedDicomIdentifier(original, replacement, ResourceType_Instance);
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
800 }
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
801 }
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
802
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
803
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
804 // (2) Remove the private tags, if need be
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
805 if (removePrivateTags_)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
806 {
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 916
diff changeset
807 toModify.RemovePrivateTags(privateTagsToKeep_);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
808 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
809
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
810 // (3) Clear the tags specified by the user
2310
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
811 for (SetOfTags::const_iterator it = clearings_.begin();
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
812 it != clearings_.end(); ++it)
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
813 {
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
814 toModify.Clear(*it, true /* only clear if the tag exists in the original file */);
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
815 }
b7fba68747f6 DicomModification::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2309
diff changeset
816
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
817 // (4) Remove the tags specified by the user
991
2f76b92addd4 keep private tags during anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 916
diff changeset
818 for (SetOfTags::const_iterator it = removals_.begin();
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
819 it != removals_.end(); ++it)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
820 {
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
821 toModify.Remove(*it);
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
822 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
823
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
824 // (5) Replace the tags
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
825 for (Replacements::const_iterator it = replacements_.begin();
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
826 it != replacements_.end(); ++it)
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
827 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
828 toModify.Replace(it->first, *it->second, true /* decode data URI scheme */,
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
829 DicomReplaceMode_InsertIfAbsent, privateCreator_);
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
830 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
831
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
832 // (6) Update the DICOM identifiers
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
833 if (level_ <= ResourceType_Study &&
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
834 !IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
835 {
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
836 if (keepStudyInstanceUid_)
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
837 {
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
838 LOG(WARNING) << "Modifying a study while keeping its original StudyInstanceUID: This should be avoided!";
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
839 }
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
840 else
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
841 {
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
842 MapDicomTags(toModify, ResourceType_Study);
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
843 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
844 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
845
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
846 if (level_ <= ResourceType_Series &&
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
847 !IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
848 {
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
849 if (keepSeriesInstanceUid_)
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
850 {
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
851 LOG(WARNING) << "Modifying a series while keeping its original SeriesInstanceUID: This should be avoided!";
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
852 }
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
853 else
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
854 {
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
855 MapDicomTags(toModify, ResourceType_Series);
2194
3b40ca7470cc "Keep" option for modifications to keep original DICOM identifiers (advanced feature)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1982
diff changeset
856 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
857 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
858
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
859 if (level_ <= ResourceType_Instance && // Always true
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
860 !IsReplaced(DICOM_TAG_SOP_INSTANCE_UID))
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
861 {
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
862 if (keepSopInstanceUid_)
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
863 {
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
864 LOG(WARNING) << "Modifying an instance while keeping its original SOPInstanceUID: This should be avoided!";
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
865 }
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
866 else
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
867 {
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
868 MapDicomTags(toModify, ResourceType_Instance);
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
869 }
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
870 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
871
3513
7db879b014ff Fix lost relationships between CT and RT-STRUCT during anonymization
amazy
parents: 3344
diff changeset
872 // (7) Update the "referenced" relationships in the case of an anonymization
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
873 if (isAnonymization_)
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
874 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
875 RelationshipsVisitor visitor(*this);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
876
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
877 if (updateReferencedRelationships_)
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
878 {
4273
0034f855c023 tuning log categories from command-line, and binary compat with orthanc framework 1.7.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4268
diff changeset
879 const_cast<const ParsedDicomFile&>(toModify).Apply(visitor);
2506
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
880 }
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
881 else
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
882 {
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
883 visitor.RemoveRelationships(toModify);
51b91ead6c38 Preservation of UID relationships while anonymizing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
884 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
885 }
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
886 }
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
887
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
888 void DicomModification::SetAllowManualIdentifiers(bool check)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
889 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
890 allowManualIdentifiers_ = check;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
891 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
892
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
893 bool DicomModification::AreAllowManualIdentifiers() const
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
894 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
895 return allowManualIdentifiers_;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
896 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
897
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
898
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
899 static bool IsDatabaseKey(const DicomTag& tag)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
900 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
901 return (tag == DICOM_TAG_PATIENT_ID ||
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
902 tag == DICOM_TAG_STUDY_INSTANCE_UID ||
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
903 tag == DICOM_TAG_SERIES_INSTANCE_UID ||
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
904 tag == DICOM_TAG_SOP_INSTANCE_UID);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
905 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
906
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
907
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
908 static void ParseListOfTags(DicomModification& target,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
909 const Json::Value& query,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
910 DicomModification::TagOperation operation,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
911 bool force)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
912 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
913 if (!query.isArray())
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
914 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
915 throw OrthancException(ErrorCode_BadRequest);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
916 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
917
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
918 for (Json::Value::ArrayIndex i = 0; i < query.size(); i++)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
919 {
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2721
diff changeset
920 if (query[i].type() != Json::stringValue)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2721
diff changeset
921 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2721
diff changeset
922 throw OrthancException(ErrorCode_BadRequest);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2721
diff changeset
923 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2721
diff changeset
924
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
925 std::string name = query[i].asString();
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
926
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
927 DicomTag tag = FromDcmtkBridge::ParseTag(name);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
928
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
929 if (!force && IsDatabaseKey(tag))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
930 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
931 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
932 "Marking tag \"" + name + "\" as to be " +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
933 (operation == DicomModification::TagOperation_Keep ? "kept" : "removed") +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
934 " requires the \"Force\" option to be set to true");
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
935 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
936
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
937 switch (operation)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
938 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
939 case DicomModification::TagOperation_Keep:
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
940 target.Keep(tag);
4313
91554aecff9a removed a friend method for better abi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4297
diff changeset
941 LOG(TRACE) << "Keep: " << name << " (" << tag.Format() << ")";
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
942 break;
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
943
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
944 case DicomModification::TagOperation_Remove:
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
945 target.Remove(tag);
4313
91554aecff9a removed a friend method for better abi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4297
diff changeset
946 LOG(TRACE) << "Remove: " << name << " (" << tag.Format() << ")";
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
947 break;
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
948
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
949 default:
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
950 throw OrthancException(ErrorCode_InternalError);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
951 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
952 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
953 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
954
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
955
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
956 static void ParseReplacements(DicomModification& target,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
957 const Json::Value& replacements,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
958 bool force)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
959 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
960 if (!replacements.isObject())
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
961 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
962 throw OrthancException(ErrorCode_BadRequest);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
963 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
964
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
965 Json::Value::Members members = replacements.getMemberNames();
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
966 for (size_t i = 0; i < members.size(); i++)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
967 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
968 const std::string& name = members[i];
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
969 const Json::Value& value = replacements[name];
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
970
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
971 DicomTag tag = FromDcmtkBridge::ParseTag(name);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
972
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
973 if (!force && IsDatabaseKey(tag))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
974 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
975 throw OrthancException(ErrorCode_BadRequest,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
976 "Marking tag \"" + name + "\" as to be replaced " +
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
977 "requires the \"Force\" option to be set to true");
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
978 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
979
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
980 target.Replace(tag, value, false);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
981
4313
91554aecff9a removed a friend method for better abi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4297
diff changeset
982 LOG(TRACE) << "Replace: " << name << " (" << tag.Format()
91554aecff9a removed a friend method for better abi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4297
diff changeset
983 << ") == " << value.toStyledString();
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
984 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
985 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
986
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
987
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
988 static bool GetBooleanValue(const std::string& member,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
989 const Json::Value& json,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
990 bool defaultValue)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
991 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
992 if (!json.isMember(member))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
993 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
994 return defaultValue;
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
995 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
996 else if (json[member].type() == Json::booleanValue)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
997 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
998 return json[member].asBool();
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
999 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1000 else
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1001 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1002 throw OrthancException(ErrorCode_BadFileFormat,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1003 "Member \"" + member + "\" should be a Boolean value");
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1004 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1005 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1006
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1007
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1008 void DicomModification::ParseModifyRequest(const Json::Value& request)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1009 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1010 if (!request.isObject())
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1011 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1012 throw OrthancException(ErrorCode_BadFileFormat);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1013 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1014
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1015 bool force = GetBooleanValue("Force", request, false);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1016
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1017 if (GetBooleanValue("RemovePrivateTags", request, false))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1018 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1019 SetRemovePrivateTags(true);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1020 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1021
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1022 if (request.isMember("Remove"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1023 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1024 ParseListOfTags(*this, request["Remove"], TagOperation_Remove, force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1025 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1026
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1027 if (request.isMember("Replace"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1028 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1029 ParseReplacements(*this, request["Replace"], force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1030 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1031
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1032 // The "Keep" operation only makes sense for the tags
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1033 // StudyInstanceUID, SeriesInstanceUID and SOPInstanceUID. Avoid
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1034 // this feature as much as possible, as this breaks the DICOM
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1035 // model of the real world, except if you know exactly what
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1036 // you're doing!
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1037 if (request.isMember("Keep"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1038 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1039 ParseListOfTags(*this, request["Keep"], TagOperation_Keep, force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1040 }
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1041
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1042 // New in Orthanc 1.6.0
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1043 if (request.isMember("PrivateCreator"))
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1044 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1045 privateCreator_ = SerializationToolbox::ReadString(request, "PrivateCreator");
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1046 }
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1047 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1048
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1049
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1050 void DicomModification::ParseAnonymizationRequest(bool& patientNameReplaced,
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1051 const Json::Value& request)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1052 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1053 if (!request.isObject())
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1054 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1055 throw OrthancException(ErrorCode_BadFileFormat);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1056 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1057
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1058 bool force = GetBooleanValue("Force", request, false);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1059
4677
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
1060 // DicomVersion version = DicomVersion_2008; // For Orthanc <= 1.2.0
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
1061 // DicomVersion version = DicomVersion_2017c; // For Orthanc between 1.3.0 and 1.9.3
521e39b3f2c0 Fix issue #146 (Update Anonyization to 2019c) - was actually updated to 2021b
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4676
diff changeset
1062 DicomVersion version = DicomVersion_2021b; // For Orthanc >= 1.9.4
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1063 if (request.isMember("DicomVersion"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1064 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1065 if (request["DicomVersion"].type() != Json::stringValue)
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1066 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1067 throw OrthancException(ErrorCode_BadFileFormat);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1068 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1069 else
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1070 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1071 version = StringToDicomVersion(request["DicomVersion"].asString());
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1072 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1073 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1074
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1075 SetupAnonymization(version);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1076
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1077 std::string patientName = GetReplacementAsString(DICOM_TAG_PATIENT_NAME);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1078
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1079 if (GetBooleanValue("KeepPrivateTags", request, false))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1080 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1081 SetRemovePrivateTags(false);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1082 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1083
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1084 if (request.isMember("Remove"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1085 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1086 ParseListOfTags(*this, request["Remove"], TagOperation_Remove, force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1087 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1088
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1089 if (request.isMember("Replace"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1090 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1091 ParseReplacements(*this, request["Replace"], force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1092 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1093
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1094 if (request.isMember("Keep"))
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1095 {
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1096 ParseListOfTags(*this, request["Keep"], TagOperation_Keep, force);
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1097 }
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1098
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1099 patientNameReplaced = (IsReplaced(DICOM_TAG_PATIENT_NAME) &&
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1100 GetReplacement(DICOM_TAG_PATIENT_NAME) == patientName);
3709
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1101
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1102 // New in Orthanc 1.6.0
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1103 if (request.isMember("PrivateCreator"))
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1104 {
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1105 privateCreator_ = SerializationToolbox::ReadString(request, "PrivateCreator");
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
1106 }
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2506
diff changeset
1107 }
2616
2f3007bf0708 event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2535
diff changeset
1108
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1109 void DicomModification::SetDicomIdentifierGenerator(DicomModification::IDicomIdentifierGenerator &generator)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1110 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1111 identifierGenerator_ = &generator;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1112 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1113
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1114
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1115
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1116
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1117 static const char* REMOVE_PRIVATE_TAGS = "RemovePrivateTags";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1118 static const char* LEVEL = "Level";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1119 static const char* ALLOW_MANUAL_IDENTIFIERS = "AllowManualIdentifiers";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1120 static const char* KEEP_STUDY_INSTANCE_UID = "KeepStudyInstanceUID";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1121 static const char* KEEP_SERIES_INSTANCE_UID = "KeepSeriesInstanceUID";
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
1122 static const char* KEEP_SOP_INSTANCE_UID = "KeepSOPInstanceUID";
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1123 static const char* UPDATE_REFERENCED_RELATIONSHIPS = "UpdateReferencedRelationships";
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
1124 static const char* IS_ANONYMIZATION = "IsAnonymization";
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1125 static const char* REMOVALS = "Removals";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1126 static const char* CLEARINGS = "Clearings";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1127 static const char* PRIVATE_TAGS_TO_KEEP = "PrivateTagsToKeep";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1128 static const char* REPLACEMENTS = "Replacements";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1129 static const char* MAP_PATIENTS = "MapPatients";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1130 static const char* MAP_STUDIES = "MapStudies";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1131 static const char* MAP_SERIES = "MapSeries";
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1132 static const char* MAP_INSTANCES = "MapInstances";
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1133 static const char* PRIVATE_CREATOR = "PrivateCreator"; // New in Orthanc 1.6.0
2616
2f3007bf0708 event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2535
diff changeset
1134
2f3007bf0708 event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2535
diff changeset
1135 void DicomModification::Serialize(Json::Value& value) const
2f3007bf0708 event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2535
diff changeset
1136 {
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1137 if (identifierGenerator_ != NULL)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1138 {
2954
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1139 throw OrthancException(ErrorCode_InternalError,
d924f9bb61cc taking advantage of details in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1140 "Cannot serialize a DicomModification with a custom identifier generator");
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1141 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1142
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1143 value = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1144 value[REMOVE_PRIVATE_TAGS] = removePrivateTags_;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1145 value[LEVEL] = EnumerationToString(level_);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1146 value[ALLOW_MANUAL_IDENTIFIERS] = allowManualIdentifiers_;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1147 value[KEEP_STUDY_INSTANCE_UID] = keepStudyInstanceUid_;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1148 value[KEEP_SERIES_INSTANCE_UID] = keepSeriesInstanceUid_;
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
1149 value[KEEP_SOP_INSTANCE_UID] = keepSopInstanceUid_;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1150 value[UPDATE_REFERENCED_RELATIONSHIPS] = updateReferencedRelationships_;
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
1151 value[IS_ANONYMIZATION] = isAnonymization_;
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1152 value[PRIVATE_CREATOR] = privateCreator_;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1153
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1154 SerializationToolbox::WriteSetOfTags(value, removals_, REMOVALS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1155 SerializationToolbox::WriteSetOfTags(value, clearings_, CLEARINGS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1156 SerializationToolbox::WriteSetOfTags(value, privateTagsToKeep_, PRIVATE_TAGS_TO_KEEP);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1157
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1158 Json::Value& tmp = value[REPLACEMENTS];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1159
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1160 tmp = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1161
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1162 for (Replacements::const_iterator it = replacements_.begin();
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1163 it != replacements_.end(); ++it)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1164 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1165 assert(it->second != NULL);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1166 tmp[it->first.Format()] = *it->second;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1167 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1168
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1169 Json::Value& mapPatients = value[MAP_PATIENTS];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1170 Json::Value& mapStudies = value[MAP_STUDIES];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1171 Json::Value& mapSeries = value[MAP_SERIES];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1172 Json::Value& mapInstances = value[MAP_INSTANCES];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1173
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1174 mapPatients = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1175 mapStudies = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1176 mapSeries = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1177 mapInstances = Json::objectValue;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1178
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1179 for (UidMap::const_iterator it = uidMap_.begin(); it != uidMap_.end(); ++it)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1180 {
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1181 Json::Value* tmp2 = NULL;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1182
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1183 switch (it->first.first)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1184 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1185 case ResourceType_Patient:
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1186 tmp2 = &mapPatients;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1187 break;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1188
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1189 case ResourceType_Study:
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1190 tmp2 = &mapStudies;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1191 break;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1192
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1193 case ResourceType_Series:
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1194 tmp2 = &mapSeries;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1195 break;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1196
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1197 case ResourceType_Instance:
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1198 tmp2 = &mapInstances;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1199 break;
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1200
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1201 default:
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1202 throw OrthancException(ErrorCode_InternalError);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1203 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1204
4200
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1205 assert(tmp2 != NULL);
7112a8af0b63 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4139
diff changeset
1206 (*tmp2) [it->first.second] = it->second;
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1207 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1208 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1209
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1210 void DicomModification::UnserializeUidMap(ResourceType level,
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1211 const Json::Value& serialized,
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1212 const char* field)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1213 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1214 if (!serialized.isMember(field) ||
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1215 serialized[field].type() != Json::objectValue)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1216 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1217 throw OrthancException(ErrorCode_BadFileFormat);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1218 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1219
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1220 Json::Value::Members names = serialized[field].getMemberNames();
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1221
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1222 for (Json::Value::Members::const_iterator it = names.begin(); it != names.end(); ++it)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1223 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1224 const Json::Value& value = serialized[field][*it];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1225
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1226 if (value.type() != Json::stringValue)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1227 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1228 throw OrthancException(ErrorCode_BadFileFormat);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1229 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1230 else
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1231 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1232 uidMap_[std::make_pair(level, *it)] = value.asString();
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1233 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1234 }
2655
c196d76cb8fa serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2616
diff changeset
1235 }
c196d76cb8fa serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2616
diff changeset
1236
c196d76cb8fa serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2616
diff changeset
1237
2666
2540ac79ab6c SequenceOfOperationsJob serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
1238 DicomModification::DicomModification(const Json::Value& serialized) :
2540ac79ab6c SequenceOfOperationsJob serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2662
diff changeset
1239 identifierGenerator_(NULL)
2655
c196d76cb8fa serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2616
diff changeset
1240 {
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1241 removePrivateTags_ = SerializationToolbox::ReadBoolean(serialized, REMOVE_PRIVATE_TAGS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1242 level_ = StringToResourceType(SerializationToolbox::ReadString(serialized, LEVEL).c_str());
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1243 allowManualIdentifiers_ = SerializationToolbox::ReadBoolean(serialized, ALLOW_MANUAL_IDENTIFIERS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1244 keepStudyInstanceUid_ = SerializationToolbox::ReadBoolean(serialized, KEEP_STUDY_INSTANCE_UID);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1245 keepSeriesInstanceUid_ = SerializationToolbox::ReadBoolean(serialized, KEEP_SERIES_INSTANCE_UID);
3860
9ccbbd55bc23 allow Keeping the SOPInstanceUID in /instances/../modify
Alain Mazy <alain@mazy.be>
parents: 3712
diff changeset
1246 keepSopInstanceUid_ = SerializationToolbox::ReadBoolean(serialized, KEEP_SOP_INSTANCE_UID);
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1247 updateReferencedRelationships_ = SerializationToolbox::ReadBoolean
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1248 (serialized, UPDATE_REFERENCED_RELATIONSHIPS);
2721
062776ab4a21 fix issue #94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2666
diff changeset
1249 isAnonymization_ = SerializationToolbox::ReadBoolean(serialized, IS_ANONYMIZATION);
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1250
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1251 if (serialized.isMember(PRIVATE_CREATOR))
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1252 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1253 privateCreator_ = SerializationToolbox::ReadString(serialized, PRIVATE_CREATOR);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1254 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1255
2662
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1256 SerializationToolbox::ReadSetOfTags(removals_, serialized, REMOVALS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1257 SerializationToolbox::ReadSetOfTags(clearings_, serialized, CLEARINGS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1258 SerializationToolbox::ReadSetOfTags(privateTagsToKeep_, serialized, PRIVATE_TAGS_TO_KEEP);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1259
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1260 if (!serialized.isMember(REPLACEMENTS) ||
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1261 serialized[REPLACEMENTS].type() != Json::objectValue)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1262 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1263 throw OrthancException(ErrorCode_BadFileFormat);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1264 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1265
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1266 Json::Value::Members names = serialized[REPLACEMENTS].getMemberNames();
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1267
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1268 for (Json::Value::Members::const_iterator it = names.begin(); it != names.end(); ++it)
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1269 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1270 DicomTag tag(0, 0);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1271 if (!DicomTag::ParseHexadecimal(tag, it->c_str()))
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1272 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1273 throw OrthancException(ErrorCode_BadFileFormat);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1274 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1275 else
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1276 {
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1277 const Json::Value& value = serialized[REPLACEMENTS][*it];
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1278 replacements_.insert(std::make_pair(tag, new Json::Value(value)));
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1279 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1280 }
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1281
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1282 UnserializeUidMap(ResourceType_Patient, serialized, MAP_PATIENTS);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1283 UnserializeUidMap(ResourceType_Study, serialized, MAP_STUDIES);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1284 UnserializeUidMap(ResourceType_Series, serialized, MAP_SERIES);
47d812308d63 serialization of DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2655
diff changeset
1285 UnserializeUidMap(ResourceType_Instance, serialized, MAP_INSTANCES);
2616
2f3007bf0708 event queues in Lua, serialization of sequence of operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2535
diff changeset
1286 }
4297
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1287
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1288
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1289 void DicomModification::SetPrivateCreator(const std::string &privateCreator)
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1290 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1291 privateCreator_ = privateCreator;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1292 }
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1293
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1294 const std::string &DicomModification::GetPrivateCreator() const
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1295 {
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1296 return privateCreator_;
785a2713323e abi continued
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4273
diff changeset
1297 }
786
b6d6b65142e8 DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1298 }