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annotate OrthancCppClient/Series.h @ 993:501880d76474 plugins

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improvements to GDCM plugin
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 02 Jul 2014 14:41:57 +0200
parents de18e90d5507
children 6e7e5ed91c2d
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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32
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33 #pragma once
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34
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35 #include "Instance.h"
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37 #include "../Core/MultiThreading/ArrayFilledByThreads.h"
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38 #include "../Core/MultiThreading/ThreadedCommandProcessor.h"
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39
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40 namespace OrthancClient
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41 {
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42 /**
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43 * {summary}{Connection to a series stored in %Orthanc.}
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44 * {description}{This class encapsulates a connection to a series
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45 * from a remote instance of %Orthanc.}
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46 **/
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47 class LAAW_API Series :
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48 public Orthanc::IDynamicObject,
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49 private Orthanc::ArrayFilledByThreads::IFiller
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50 {
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51 private:
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52 enum Status3DImage
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53 {
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54 Status3DImage_NotTested,
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55 Status3DImage_True,
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56 Status3DImage_False
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57 };
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58
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59 const OrthancConnection& connection_;
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60 std::string id_, url_;
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61 Json::Value series_;
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62 Orthanc::ArrayFilledByThreads instances_;
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63 Status3DImage status_;
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64
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65 float voxelSizeX_;
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66 float voxelSizeY_;
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67 float voxelSizeZ_;
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68 float sliceThickness_;
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69
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70 void Check3DImage();
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71
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72 bool Is3DImageInternal();
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73
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74 void ReadSeries();
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75
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76 virtual size_t GetFillerSize()
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77 {
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78 return series_["Instances"].size();
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79 }
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81 virtual Orthanc::IDynamicObject* GetFillerItem(size_t index);
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82
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83 void Load3DImageInternal(void* target,
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84 Orthanc::PixelFormat format,
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85 size_t lineStride,
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86 size_t stackStride,
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87 Orthanc::ThreadedCommandProcessor::IListener* listener);
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88
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89 public:
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90 /**
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91 * {summary}{Create a connection to some series.}
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92 * {param}{connection The remote instance of %Orthanc.}
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93 * {param}{id The %Orthanc identifier of the series.}
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94 **/
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95 Series(const OrthancConnection& connection,
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96 const char* id);
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97
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98 /**
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99 * {summary}{Reload the instances of this series.}
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100 * {description}{This method will reload the list of the instances of this series. Pay attention to the fact that the instances that have been previously returned by GetInstance() will be invalidated.}
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101 **/
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102 void Reload()
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103 {
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104 instances_.Reload();
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105 }
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106
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107 /**
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108 * {summary}{Return the number of instances for this series.}
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109 * {returns}{The number of instances.}
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110 **/
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111 uint32_t GetInstanceCount();
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112
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113 /**
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114 * {summary}{Get some instance of this series.}
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115 * {description}{This method will return an object that contains information about some instance. The instances are indexed by a number between 0 (inclusive) and the result of GetInstanceCount() (exclusive).}
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116 * {param}{index The index of the instance of interest.}
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117 * {returns}{The instance.}
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118 **/
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119 Instance& GetInstance(uint32_t index);
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120
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121 /**
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122 * {summary}{Get the %Orthanc identifier of this series.}
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123 * {returns}{The identifier.}
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124 **/
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125 const char* GetId() const
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126 {
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127 return id_.c_str();
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128 }
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129
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130 /**
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131 * {summary}{Returns the URL to this series.}
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132 * {returns}{The URL.}
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133 **/
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134 const char* GetUrl() const
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135 {
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136 return url_.c_str();
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137 }
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139
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140 /**
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141 * {summary}{Get the value of one of the main DICOM tags for this series.}
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142 * {param}{tag The name of the tag of interest ("Modality", "Manufacturer", "SeriesDate", "SeriesDescription", "SeriesInstanceUID"...).}
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143 * {param}{defaultValue The default value to be returned if this tag does not exist.}
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144 * {returns}{The value of the tag.}
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145 **/
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146 const char* GetMainDicomTag(const char* tag,
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147 const char* defaultValue) const;
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148
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149 /**
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150 * {summary}{Test whether this series encodes a 3D image that can be downloaded from %Orthanc.}
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151 * {returns}{"true" if and only if this is a 3D image.}
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152 **/
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153 bool Is3DImage();
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154
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155 /**
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156 * {summary}{Get the width of the 3D image.}
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157 * {description}{Get the width of the 3D image (i.e. along the X-axis). This call is only valid if this series corresponds to a 3D image.}
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158 * {returns}{The width.}
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159 **/
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160 uint32_t GetWidth();
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161
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162 /**
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163 * {summary}{Get the height of the 3D image.}
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164 * {description}{Get the height of the 3D image (i.e. along the Y-axis). This call is only valid if this series corresponds to a 3D image.}
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165 * {returns}{The height.}
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166 **/
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167 uint32_t GetHeight();
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168
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169 /**
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170 * {summary}{Get the physical size of a voxel along the X-axis.}
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171 * {description}{Get the physical size of a voxel along the X-axis. This call is only valid if this series corresponds to a 3D image.}
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172 * {returns}{The voxel size.}
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173 **/
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174 float GetVoxelSizeX();
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175
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176 /**
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177 * {summary}{Get the physical size of a voxel along the Y-axis.}
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178 * {description}{Get the physical size of a voxel along the Y-axis. This call is only valid if this series corresponds to a 3D image.}
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179 * {returns}{The voxel size.}
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180 **/
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181 float GetVoxelSizeY();
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182
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183 /**
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184 * {summary}{Get the physical size of a voxel along the Z-axis.}
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185 * {description}{Get the physical size of a voxel along the Z-axis. This call is only valid if this series corresponds to a 3D image.}
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186 * {returns}{The voxel size.}
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187 **/
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188 float GetVoxelSizeZ();
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189
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190 /**
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191 * {summary}{Get the slice thickness.}
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192 * {description}{Get the slice thickness. This call is only valid if this series corresponds to a 3D image.}
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193 * {returns}{The slice thickness.}
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194 **/
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195 float GetSliceThickness();
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196
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197 LAAW_API_INTERNAL void Load3DImage(void* target,
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198 Orthanc::PixelFormat format,
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199 int64_t lineStride,
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200 int64_t stackStride,
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201 Orthanc::ThreadedCommandProcessor::IListener& listener)
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202 {
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203 Load3DImageInternal(target, format, static_cast<size_t>(lineStride),
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204 static_cast<size_t>(stackStride), &listener);
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205 }
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206
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207 /**
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208 * {summary}{Load the 3D image into a memory buffer.}
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209 * {description}{Load the 3D image into a memory buffer. This call is only valid if this series corresponds to a 3D image. The "target" buffer must be wide enough to store all the voxels of the image.}
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210 * {param}{target The target memory buffer.}
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211 * {param}{format The memory layout of the voxels.}
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212 * {param}{lineStride The number of bytes between two lines in the target memory buffer.}
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213 * {param}{stackStride The number of bytes between two 2D slices in the target memory buffer.}
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214 **/
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215 void Load3DImage(void* target,
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216 Orthanc::PixelFormat format,
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217 int64_t lineStride,
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218 int64_t stackStride)
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219 {
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220 Load3DImageInternal(target, format, static_cast<size_t>(lineStride),
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221 static_cast<size_t>(stackStride), NULL);
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222 }
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223
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224 /**
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225 * {summary}{Load the 3D image into a memory buffer.}
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226 * {description}{Load the 3D image into a memory buffer. This call is only valid if this series corresponds to a 3D image. The "target" buffer must be wide enough to store all the voxels of the image. This method will also update a progress indicator to monitor the loading of the image.}
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227 * {param}{target The target memory buffer.}
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228 * {param}{format The memory layout of the voxels.}
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229 * {param}{lineStride The number of bytes between two lines in the target memory buffer.}
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230 * {param}{stackStride The number of bytes between two 2D slices in the target memory buffer.}
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231 * {param}{progress A pointer to a floating-point number that is continuously updated by the download threads to reflect the percentage of completion (between 0 and 1). This value can be read from a separate thread.}
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232 **/
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233 void Load3DImage(void* target,
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234 Orthanc::PixelFormat format,
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235 int64_t lineStride,
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236 int64_t stackStride,
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237 float* progress);
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238 };
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239 }