Mercurial > hg > orthanc

annotate OrthancServer/Resources/Samples/Python/AnonymizeAllPatients.py @ 5485:48b8dae6dc77

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
upgrade to year 2024
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 04 Jan 2024 15:10:42 +0100
parents 0ea402b4d901
children f7adfb22e20e
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
352
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 #!/usr/bin/python
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 # -*- coding: utf-8 -*-
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3
747
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
4 # Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
5 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 747
diff changeset
6 # Department, University Hospital of Liege, Belgium
5485
48b8dae6dc77 upgrade to year 2024
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
7 # Copyright (C) 2017-2024 Osimis S.A., Belgium
48b8dae6dc77 upgrade to year 2024
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
8 # Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
747
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
9 #
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
10 # This program is free software: you can redistribute it and/or
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
11 # modify it under the terms of the GNU General Public License as
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
12 # published by the Free Software Foundation, either version 3 of the
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
13 # License, or (at your option) any later version.
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
14 #
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
15 # This program is distributed in the hope that it will be useful, but
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
16 # WITHOUT ANY WARRANTY; without even the implied warranty of
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
18 # General Public License for more details.
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
19 #
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
20 # You should have received a copy of the GNU General Public License
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
21 # along with this program. If not, see <http://www.gnu.org/licenses/>.
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
22
44382c8bcd15 added explicit licensing terms for samples
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 353
diff changeset
23
352
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24
2032
65b1ce7cb84f Replaced "localhost" by "127.0.0.1", as it might impact performance on Windows
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
25 URL = 'http://127.0.0.1:8042'
352
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 #
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 # This sample code will anonymize all the patients that are stored in
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 # Orthanc.
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 #
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 import sys
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33 import RestToolbox
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 # Loop over the patients
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 for patient in RestToolbox.DoGet('%s/patients' % URL):
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 # Ignore patients whose name starts with "Anonymized", as it is
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 # the result of a previous anonymization
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 infos = RestToolbox.DoGet('%s/patients/%s' % (URL, patient))
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 name = infos['MainDicomTags']['PatientName'].lower()
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42 if not name.startswith('anonymized'):
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43
cc9eddbf07d3 sample to anonymize patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44 # Trigger the anonymization
353
61e4c62b8c35 samples of anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 352
diff changeset
45 RestToolbox.DoPost('%s/patients/%s/anonymize' % (URL, patient),
61e4c62b8c35 samples of anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 352
diff changeset
46 { 'Keep' : [ 'SeriesDescription',
61e4c62b8c35 samples of anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 352
diff changeset
47 'StudyDescription' ] })