Mercurial > hg > orthanc
annotate OrthancServer/Sources/Database/Compatibility/DatabaseLookup.cpp @ 5216:450ac804d3af db-protobuf
simplifying IDatabaseWrapper::LogChange()
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 03 Apr 2023 14:49:33 +0200 |
parents | 0ea402b4d901 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../../PrecompiledHeadersServer.h" |
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24 #include "DatabaseLookup.h" |
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25 |
4045 | 26 #include "../../../../OrthancFramework/Sources/OrthancException.h" |
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27 #include "../../Search/DicomTagConstraint.h" |
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28 #include "../../ServerToolbox.h" |
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29 #include "SetOfResources.h" |
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30 |
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31 namespace Orthanc |
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32 { |
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33 namespace Compatibility |
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34 { |
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35 namespace |
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36 { |
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37 // Anonymous namespace to avoid clashes between compiler modules |
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38 class MainTagsConstraints : boost::noncopyable |
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39 { |
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40 private: |
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41 std::vector<DicomTagConstraint*> constraints_; |
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42 |
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43 public: |
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44 ~MainTagsConstraints() |
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45 { |
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46 for (size_t i = 0; i < constraints_.size(); i++) |
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47 { |
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48 assert(constraints_[i] != NULL); |
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49 delete constraints_[i]; |
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50 } |
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51 } |
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52 |
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53 void Reserve(size_t n) |
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54 { |
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55 constraints_.reserve(n); |
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56 } |
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57 |
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58 size_t GetSize() const |
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59 { |
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60 return constraints_.size(); |
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61 } |
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62 |
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63 DicomTagConstraint& GetConstraint(size_t i) const |
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64 { |
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65 if (i >= constraints_.size()) |
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66 { |
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67 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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68 } |
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69 else |
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70 { |
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71 assert(constraints_[i] != NULL); |
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72 return *constraints_[i]; |
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73 } |
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74 } |
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75 |
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76 void Add(const DatabaseConstraint& constraint) |
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77 { |
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78 constraints_.push_back(new DicomTagConstraint(constraint)); |
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79 } |
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80 }; |
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81 } |
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82 |
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83 |
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84 static void ApplyIdentifierConstraint(SetOfResources& candidates, |
3085 | 85 ILookupResources& compatibility, |
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86 const DatabaseConstraint& constraint, |
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87 ResourceType level) |
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88 { |
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89 std::list<int64_t> matches; |
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90 |
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91 switch (constraint.GetConstraintType()) |
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92 { |
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93 case ConstraintType_Equal: |
3084 | 94 compatibility.LookupIdentifier(matches, level, constraint.GetTag(), |
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95 IdentifierConstraintType_Equal, constraint.GetSingleValue()); |
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96 break; |
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97 |
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98 case ConstraintType_SmallerOrEqual: |
3084 | 99 compatibility.LookupIdentifier(matches, level, constraint.GetTag(), |
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100 IdentifierConstraintType_SmallerOrEqual, constraint.GetSingleValue()); |
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101 break; |
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102 |
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103 case ConstraintType_GreaterOrEqual: |
3084 | 104 compatibility.LookupIdentifier(matches, level, constraint.GetTag(), |
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105 IdentifierConstraintType_GreaterOrEqual, constraint.GetSingleValue()); |
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106 |
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107 break; |
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108 |
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109 case ConstraintType_Wildcard: |
3084 | 110 compatibility.LookupIdentifier(matches, level, constraint.GetTag(), |
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111 IdentifierConstraintType_Wildcard, constraint.GetSingleValue()); |
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112 |
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113 break; |
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114 |
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115 case ConstraintType_List: |
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116 for (size_t i = 0; i < constraint.GetValuesCount(); i++) |
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117 { |
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118 std::list<int64_t> tmp; |
3084 | 119 compatibility.LookupIdentifier(tmp, level, constraint.GetTag(), |
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120 IdentifierConstraintType_Wildcard, constraint.GetValue(i)); |
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121 matches.splice(matches.end(), tmp); |
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122 } |
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123 |
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124 break; |
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125 |
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126 default: |
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127 throw OrthancException(ErrorCode_InternalError); |
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128 } |
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129 |
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130 candidates.Intersect(matches); |
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131 } |
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132 |
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133 |
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134 static void ApplyIdentifierRange(SetOfResources& candidates, |
3085 | 135 ILookupResources& compatibility, |
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136 const DatabaseConstraint& smaller, |
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137 const DatabaseConstraint& greater, |
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138 ResourceType level) |
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139 { |
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140 assert(smaller.GetConstraintType() == ConstraintType_SmallerOrEqual && |
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141 greater.GetConstraintType() == ConstraintType_GreaterOrEqual && |
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142 smaller.GetTag() == greater.GetTag() && |
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143 ServerToolbox::IsIdentifier(smaller.GetTag(), level)); |
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144 |
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145 std::list<int64_t> matches; |
3084 | 146 compatibility.LookupIdentifierRange(matches, level, smaller.GetTag(), |
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147 greater.GetSingleValue(), smaller.GetSingleValue()); |
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148 candidates.Intersect(matches); |
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149 } |
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150 |
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151 |
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152 static void ApplyLevel(SetOfResources& candidates, |
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153 IDatabaseWrapper::ITransaction& transaction, |
3085 | 154 ILookupResources& compatibility, |
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155 const std::vector<DatabaseConstraint>& lookup, |
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156 ResourceType level) |
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157 { |
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158 typedef std::set<const DatabaseConstraint*> SetOfConstraints; |
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159 typedef std::map<DicomTag, SetOfConstraints> Identifiers; |
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160 |
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161 // (1) Select which constraints apply to this level, and split |
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162 // them between "identifier tags" constraints and "main DICOM |
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163 // tags" constraints |
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164 |
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165 Identifiers identifiers; |
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166 SetOfConstraints mainTags; |
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167 |
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168 for (size_t i = 0; i < lookup.size(); i++) |
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169 { |
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170 if (lookup[i].GetLevel() == level) |
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171 { |
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172 if (lookup[i].IsIdentifier()) |
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173 { |
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174 identifiers[lookup[i].GetTag()].insert(&lookup[i]); |
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175 } |
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176 else |
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177 { |
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178 mainTags.insert(&lookup[i]); |
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179 } |
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180 } |
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181 } |
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182 |
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183 |
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184 // (2) Apply the constraints over the identifiers |
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185 |
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186 for (Identifiers::const_iterator it = identifiers.begin(); |
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187 it != identifiers.end(); ++it) |
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188 { |
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189 // Check whether some range constraint over identifiers is |
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190 // present at this level |
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191 const DatabaseConstraint* smaller = NULL; |
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192 const DatabaseConstraint* greater = NULL; |
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193 |
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194 for (SetOfConstraints::const_iterator it2 = it->second.begin(); |
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195 it2 != it->second.end(); ++it2) |
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196 { |
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197 assert(*it2 != NULL); |
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198 |
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199 if ((*it2)->GetConstraintType() == ConstraintType_SmallerOrEqual) |
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200 { |
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201 smaller = *it2; |
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202 } |
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203 |
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204 if ((*it2)->GetConstraintType() == ConstraintType_GreaterOrEqual) |
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205 { |
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206 greater = *it2; |
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207 } |
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208 } |
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209 |
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210 if (smaller != NULL && |
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211 greater != NULL) |
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212 { |
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213 // There is a range constraint: Apply it, as it is more efficient |
3084 | 214 ApplyIdentifierRange(candidates, compatibility, *smaller, *greater, level); |
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215 } |
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216 else |
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217 { |
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218 smaller = NULL; |
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219 greater = NULL; |
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220 } |
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221 |
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222 for (SetOfConstraints::const_iterator it2 = it->second.begin(); |
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223 it2 != it->second.end(); ++it2) |
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224 { |
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225 // Check to avoid applying twice the range constraint |
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226 if (*it2 != smaller && |
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227 *it2 != greater) |
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228 { |
3084 | 229 ApplyIdentifierConstraint(candidates, compatibility, **it2, level); |
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230 } |
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231 } |
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232 } |
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233 |
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234 |
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235 // (3) Apply the constraints over the main DICOM tags (no index |
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236 // here, so this is less efficient than filtering over the |
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237 // identifiers) |
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238 if (!mainTags.empty()) |
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239 { |
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240 MainTagsConstraints c; |
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241 c.Reserve(mainTags.size()); |
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242 |
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243 for (SetOfConstraints::const_iterator it = mainTags.begin(); |
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244 it != mainTags.end(); ++it) |
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245 { |
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246 assert(*it != NULL); |
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247 c.Add(**it); |
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248 } |
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249 |
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250 std::list<int64_t> source; |
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252 candidates.Clear(); |
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253 |
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254 std::list<int64_t> filtered; |
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255 for (std::list<int64_t>::const_iterator candidate = source.begin(); |
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256 candidate != source.end(); ++candidate) |
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257 { |
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258 DicomMap tags; |
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259 transaction.GetMainDicomTags(tags, *candidate); |
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260 |
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261 bool match = true; |
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262 |
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263 for (size_t i = 0; i < c.GetSize(); i++) |
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264 { |
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265 if (!c.GetConstraint(i).IsMatch(tags)) |
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266 { |
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267 match = false; |
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268 break; |
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269 } |
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270 } |
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271 |
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272 if (match) |
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273 { |
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274 filtered.push_back(*candidate); |
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275 } |
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276 } |
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277 |
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278 candidates.Intersect(filtered); |
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279 } |
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280 } |
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281 |
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282 |
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283 static std::string GetOneInstance(IDatabaseWrapper::ITransaction& compatibility, |
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284 int64_t resource, |
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285 ResourceType level) |
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286 { |
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287 for (int i = level; i < ResourceType_Instance; i++) |
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288 { |
3084 | 289 assert(compatibility.GetResourceType(resource) == static_cast<ResourceType>(i)); |
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290 |
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291 std::list<int64_t> children; |
3084 | 292 compatibility.GetChildrenInternalId(children, resource); |
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293 |
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294 if (children.empty()) |
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295 { |
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296 throw OrthancException(ErrorCode_Database); |
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297 } |
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298 |
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299 resource = children.front(); |
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300 } |
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301 |
3084 | 302 return compatibility.GetPublicId(resource); |
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303 } |
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304 |
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305 |
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306 void DatabaseLookup::ApplyLookupResources(std::list<std::string>& resourcesId, |
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307 std::list<std::string>* instancesId, |
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308 const std::vector<DatabaseConstraint>& lookup, |
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309 ResourceType queryLevel, |
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310 size_t limit) |
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311 { |
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312 // This is a re-implementation of |
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313 // "../../../Resources/Graveyard/DatabaseOptimizations/LookupResource.cpp" |
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314 |
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315 assert(ResourceType_Patient < ResourceType_Study && |
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316 ResourceType_Study < ResourceType_Series && |
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317 ResourceType_Series < ResourceType_Instance); |
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318 |
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319 ResourceType upperLevel = queryLevel; |
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320 ResourceType lowerLevel = queryLevel; |
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321 |
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322 for (size_t i = 0; i < lookup.size(); i++) |
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323 { |
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324 ResourceType level = lookup[i].GetLevel(); |
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325 |
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326 if (level < upperLevel) |
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327 { |
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328 upperLevel = level; |
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329 } |
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330 |
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331 if (level > lowerLevel) |
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332 { |
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333 lowerLevel = level; |
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334 } |
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335 } |
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336 |
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337 assert(upperLevel <= queryLevel && |
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338 queryLevel <= lowerLevel); |
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339 |
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340 SetOfResources candidates(transaction_, upperLevel); |
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341 |
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342 for (int level = upperLevel; level <= lowerLevel; level++) |
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343 { |
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344 ApplyLevel(candidates, transaction_, compatibility_, lookup, static_cast<ResourceType>(level)); |
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345 |
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346 if (level != lowerLevel) |
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347 { |
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348 candidates.GoDown(); |
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349 } |
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350 } |
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351 |
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352 std::list<int64_t> resources; |
3084 | 353 candidates.Flatten(compatibility_, resources); |
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354 |
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355 // Climb up, up to queryLevel |
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356 |
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357 for (int level = lowerLevel; level > queryLevel; level--) |
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358 { |
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359 std::list<int64_t> parents; |
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360 for (std::list<int64_t>::const_iterator |
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361 it = resources.begin(); it != resources.end(); ++it) |
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362 { |
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363 int64_t parent; |
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364 if (transaction_.LookupParent(parent, *it)) |
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365 { |
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366 parents.push_back(parent); |
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367 } |
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368 } |
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369 |
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370 resources.swap(parents); |
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371 } |
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372 |
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373 // Apply the limit, if given |
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374 |
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375 if (limit != 0 && |
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376 resources.size() > limit) |
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377 { |
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378 resources.resize(limit); |
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379 } |
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380 |
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381 // Get the public ID of all the selected resources |
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382 |
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383 size_t pos = 0; |
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384 |
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385 for (std::list<int64_t>::const_iterator |
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386 it = resources.begin(); it != resources.end(); ++it, pos++) |
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387 { |
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388 assert(transaction_.GetResourceType(*it) == queryLevel); |
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389 |
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390 const std::string resource = transaction_.GetPublicId(*it); |
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391 resourcesId.push_back(resource); |
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392 |
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393 if (instancesId != NULL) |
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394 { |
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395 if (queryLevel == ResourceType_Instance) |
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396 { |
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397 // The resource is itself the instance |
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398 instancesId->push_back(resource); |
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399 } |
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400 else |
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401 { |
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402 // Collect one child instance for each of the selected resources |
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403 instancesId->push_back(GetOneInstance(transaction_, *it, queryLevel)); |
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404 } |
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405 } |
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406 } |
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407 } |
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408 } |
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409 } |