Mercurial > hg > orthanc

annotate OrthancServer/Sources/ServerJobs/ResourceModificationJob.cpp @ 4583:42a846166fa3 db-changes

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removing link to ServerIndex in ReadWriteTransaction
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 09 Mar 2021 15:37:47 +0100
parents 8f9090b137f1
children 45bce660ce3a
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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32
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33
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34 #include "../PrecompiledHeadersServer.h"
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35 #include "ResourceModificationJob.h"
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36
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37 #include "../../../OrthancFramework/Sources/Logging.h"
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38 #include "../../../OrthancFramework/Sources/SerializationToolbox.h"
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39 #include "../ServerContext.h"
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40
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41 #include <dcmtk/dcmdata/dcfilefo.h>
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42 #include <dcmtk/dcmdata/dcdeftag.h>
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43 #include <cassert>
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44
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45 namespace Orthanc
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46 {
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47 class ResourceModificationJob::Output : public boost::noncopyable
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48 {
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49 private:
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50 ResourceType level_;
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51 bool isFirst_;
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52 std::string id_;
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53 std::string patientId_;
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54
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55 public:
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56 explicit Output(ResourceType level) :
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57 level_(level),
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58 isFirst_(true)
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59 {
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60 if (level_ != ResourceType_Patient &&
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61 level_ != ResourceType_Study &&
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62 level_ != ResourceType_Series)
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63 {
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64 throw OrthancException(ErrorCode_ParameterOutOfRange);
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65 }
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66 }
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67
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68 ResourceType GetLevel() const
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69 {
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70 return level_;
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71 }
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72
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73
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74 void Update(DicomInstanceHasher& hasher)
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75 {
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76 if (isFirst_)
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77 {
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78 switch (level_)
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79 {
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80 case ResourceType_Series:
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81 id_ = hasher.HashSeries();
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82 break;
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83
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84 case ResourceType_Study:
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85 id_ = hasher.HashStudy();
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86 break;
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87
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88 case ResourceType_Patient:
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89 id_ = hasher.HashPatient();
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90 break;
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91
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92 default:
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93 throw OrthancException(ErrorCode_InternalError);
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94 }
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95
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96 patientId_ = hasher.HashPatient();
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97 isFirst_ = false;
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98 }
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99 }
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100
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101
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102 bool Format(Json::Value& target)
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103 {
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104 if (isFirst_)
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105 {
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106 return false;
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107 }
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108 else
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109 {
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110 target = Json::objectValue;
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111 target["Type"] = EnumerationToString(level_);
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112 target["ID"] = id_;
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113 target["Path"] = GetBasePath(level_, id_);
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114 target["PatientID"] = patientId_;
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115 return true;
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116 }
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117 }
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118
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119
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120 bool GetIdentifier(std::string& id)
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121 {
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122 if (isFirst_)
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123 {
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124 return false;
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125 }
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126 else
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127 {
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128 id = id_;
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129 return true;
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130 }
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131 }
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132 };
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133
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134
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135
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136
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137 bool ResourceModificationJob::HandleInstance(const std::string& instance)
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138 {
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139 if (modification_.get() == NULL ||
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140 output_.get() == NULL)
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141 {
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142 throw OrthancException(ErrorCode_BadSequenceOfCalls,
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143 "No modification was provided for this job");
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144 }
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145
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146
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147 LOG(INFO) << "Modifying instance in a job: " << instance;
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148
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149
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150 /**
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151 * Retrieve the original instance from the DICOM cache.
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152 **/
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153
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154 std::unique_ptr<DicomInstanceHasher> originalHasher;
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155 std::unique_ptr<ParsedDicomFile> modified;
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156
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157 try
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158 {
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159 ServerContext::DicomCacheLocker locker(GetContext(), instance);
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160 ParsedDicomFile& original = locker.GetDicom();
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161
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162 originalHasher.reset(new DicomInstanceHasher(original.GetHasher()));
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163 modified.reset(original.Clone(true));
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164 }
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165 catch (OrthancException& e)
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166 {
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167 LOG(WARNING) << "An error occurred while executing a Modification job on instance " << instance << ": " << e.GetDetails();
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168 return false;
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169 }
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170
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171
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172 /**
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173 * Compute the resulting DICOM instance.
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174 **/
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175
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176 modification_->Apply(*modified);
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177
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178 const std::string modifiedUid = IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject());
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179
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180 if (transcode_)
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181 {
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182 std::set<DicomTransferSyntax> syntaxes;
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183 syntaxes.insert(transferSyntax_);
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184
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185 IDicomTranscoder::DicomImage source;
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186 source.AcquireParsed(*modified); // "modified" is invalid below this point
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187
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188 IDicomTranscoder::DicomImage transcoded;
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189 if (GetContext().Transcode(transcoded, source, syntaxes, true))
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190 {
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191 modified.reset(transcoded.ReleaseAsParsedDicomFile());
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192
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193 // Fix the SOP instance UID in order the preserve the
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194 // references between instance UIDs in the DICOM hierarchy
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195 // (the UID might have changed in the case of lossy transcoding)
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196 if (modified.get() == NULL ||
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197 modified->GetDcmtkObject().getDataset() == NULL ||
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198 !modified->GetDcmtkObject().getDataset()->putAndInsertString(
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199 DCM_SOPInstanceUID, modifiedUid.c_str(), OFTrue /* replace */).good())
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200 {
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201 throw OrthancException(ErrorCode_InternalError);
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202 }
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203 }
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204 else
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205 {
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206 LOG(WARNING) << "Cannot transcode instance, keeping original transfer syntax: " << instance;
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207 modified.reset(source.ReleaseAsParsedDicomFile());
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208 }
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209 }
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210
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211 assert(modifiedUid == IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject()));
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212
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213 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(*modified));
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214 toStore->SetOrigin(origin_);
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215
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216
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217 /**
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218 * Prepare the metadata information to associate with the
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219 * resulting DICOM instance (AnonymizedFrom/ModifiedFrom).
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220 **/
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221
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222 DicomInstanceHasher modifiedHasher = modified->GetHasher();
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223
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224 MetadataType metadataType = (isAnonymization_ ?
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225 MetadataType_AnonymizedFrom :
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226 MetadataType_ModifiedFrom);
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227
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228 if (originalHasher->HashSeries() != modifiedHasher.HashSeries())
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229 {
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230 toStore->AddMetadata(ResourceType_Series, metadataType, originalHasher->HashSeries());
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231 }
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232
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233 if (originalHasher->HashStudy() != modifiedHasher.HashStudy())
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234 {
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235 toStore->AddMetadata(ResourceType_Study, metadataType, originalHasher->HashStudy());
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236 }
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237
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238 if (originalHasher->HashPatient() != modifiedHasher.HashPatient())
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239 {
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240 toStore->AddMetadata(ResourceType_Patient, metadataType, originalHasher->HashPatient());
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241 }
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242
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243 assert(instance == originalHasher->HashInstance());
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244 toStore->AddMetadata(ResourceType_Instance, metadataType, instance);
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245
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246
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247 /**
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248 * Store the resulting DICOM instance into the Orthanc store.
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249 **/
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250
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251 std::string modifiedInstance;
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diff changeset
252 if (GetContext().Store(modifiedInstance, *toStore,
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diff changeset
253 StoreInstanceMode_Default) != StoreStatus_Success)
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diff changeset
254 {
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diff changeset
255 throw OrthancException(ErrorCode_CannotStoreInstance,
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256 "Error while storing a modified instance " + instance);
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257 }
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258
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259 /**
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260 * The assertion below will fail if automated transcoding to a
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261 * lossy transfer syntax is enabled in the Orthanc core, and if
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262 * the source instance is not in this transfer syntax.
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263 **/
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264 // assert(modifiedInstance == modifiedHasher.HashInstance());
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265
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266 output_->Update(modifiedHasher);
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267
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268 return true;
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269 }
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270
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271
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diff changeset
272 ResourceModificationJob::ResourceModificationJob(ServerContext& context) :
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273 CleaningInstancesJob(context, true /* by default, keep source */),
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diff changeset
274 modification_(new DicomModification),
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diff changeset
275 isAnonymization_(false),
4206
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diff changeset
276 transcode_(false),
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277 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
3943
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Sebastien Jodogne <s.jodogne@gmail.com>
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278 {
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diff changeset
279 }
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280
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281
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282 void ResourceModificationJob::SetModification(DicomModification* modification,
2868
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
283 ResourceType level,
2642
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diff changeset
284 bool isAnonymization)
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parents:
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285 {
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286 if (modification == NULL)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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287 {
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288 throw OrthancException(ErrorCode_NullPointer);
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parents:
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289 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
290 else if (IsStarted())
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parents:
diff changeset
291 {
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292 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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Sebastien Jodogne <s.jodogne@gmail.com>
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293 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
294 else
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parents:
diff changeset
295 {
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diff changeset
296 modification_.reset(modification);
2868
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diff changeset
297 output_.reset(new Output(level));
2642
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298 isAnonymization_ = isAnonymization;
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299 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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300 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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301
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parents:
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302
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diff changeset
303 void ResourceModificationJob::SetOrigin(const DicomInstanceOrigin& origin)
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Sebastien Jodogne <s.jodogne@gmail.com>
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304 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
305 if (IsStarted())
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 {
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diff changeset
307 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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Sebastien Jodogne <s.jodogne@gmail.com>
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308 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 else
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parents:
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310 {
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diff changeset
311 origin_ = origin;
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312 }
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313 }
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parents:
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314
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315
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diff changeset
316 void ResourceModificationJob::SetOrigin(const RestApiCall& call)
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diff changeset
317 {
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
318 SetOrigin(DicomInstanceOrigin::FromRest(call));
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
319 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
320
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
321
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
322 const DicomModification& ResourceModificationJob::GetModification() const
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
323 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
324 if (modification_.get() == NULL)
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
325 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
326 throw OrthancException(ErrorCode_BadSequenceOfCalls);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
327 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
328 else
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
329 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
330 return *modification_;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
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diff changeset
331 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334
3943
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
335 DicomTransferSyntax ResourceModificationJob::GetTransferSyntax() const
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
336 {
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parents: 3942
diff changeset
337 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
338 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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diff changeset
339 return transferSyntax_;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
340 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
341 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
342 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
343 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
344 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
345 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
346
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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diff changeset
347
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diff changeset
348 void ResourceModificationJob::SetTranscode(DicomTransferSyntax syntax)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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diff changeset
349 {
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parents: 3942
diff changeset
350 if (IsStarted())
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parents: 3942
diff changeset
351 {
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parents: 3942
diff changeset
352 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
353 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
354 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
355 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
356 transcode_ = true;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
357 transferSyntax_ = syntax;
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parents: 3942
diff changeset
358 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
359 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
360
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
361
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
362 void ResourceModificationJob::SetTranscode(const std::string& transferSyntaxUid)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
363 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
364 DicomTransferSyntax s;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
365 if (LookupTransferSyntax(s, transferSyntaxUid))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
366 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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parents: 3942
diff changeset
367 SetTranscode(s);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
368 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
369 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
370 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
371 throw OrthancException(ErrorCode_BadFileFormat,
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
372 "Unknown transfer syntax UID: " + transferSyntaxUid);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
373 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
374 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
375
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
376
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
377 void ResourceModificationJob::ClearTranscode()
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
378 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
379 if (IsStarted())
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
380 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
381 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
382 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
383 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
384 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
385 transcode_ = false;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
386 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
387 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
388
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
389
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
390 void ResourceModificationJob::GetPublicContent(Json::Value& value)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
391 {
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3938
diff changeset
392 CleaningInstancesJob::GetPublicContent(value);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
393
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
394 value["IsAnonymization"] = isAnonymization_;
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
395
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
396 if (output_.get() != NULL)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
397 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
398 output_->Format(value);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
399 }
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
400
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
401 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
402 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
403 value["Transcode"] = GetTransferSyntaxUid(transferSyntax_);
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404 }
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405 }
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406
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407
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408 static const char* MODIFICATION = "Modification";
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409 static const char* ORIGIN = "Origin";
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410 static const char* IS_ANONYMIZATION = "IsAnonymization";
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411 static const char* TRANSCODE = "Transcode";
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412
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413
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414 ResourceModificationJob::ResourceModificationJob(ServerContext& context,
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415 const Json::Value& serialized) :
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416 CleaningInstancesJob(context, serialized, true /* by default, keep source */),
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417 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
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418 {
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419 assert(serialized.type() == Json::objectValue);
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420
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421 isAnonymization_ = SerializationToolbox::ReadBoolean(serialized, IS_ANONYMIZATION);
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422 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
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423 modification_.reset(new DicomModification(serialized[MODIFICATION]));
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424
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425 if (serialized.isMember(TRANSCODE))
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426 {
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427 SetTranscode(SerializationToolbox::ReadString(serialized, TRANSCODE));
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428 }
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429 else
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430 {
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431 transcode_ = false;
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432 }
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433 }
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434
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435 bool ResourceModificationJob::Serialize(Json::Value& value)
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436 {
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437 if (!CleaningInstancesJob::Serialize(value))
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438 {
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439 return false;
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440 }
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441 else
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442 {
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443 assert(value.type() == Json::objectValue);
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444
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445 value[IS_ANONYMIZATION] = isAnonymization_;
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446
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447 if (transcode_)
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448 {
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449 value[TRANSCODE] = GetTransferSyntaxUid(transferSyntax_);
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450 }
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diff changeset
451
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diff changeset
452 origin_.Serialize(value[ORIGIN]);
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453
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diff changeset
454 Json::Value tmp;
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diff changeset
455 modification_->Serialize(tmp);
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456 value[MODIFICATION] = tmp;
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457
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458 return true;
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diff changeset
459 }
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460 }
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461 }