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annotate UnitTestsSources/DicomMapTests.cpp @ 2194:3b40ca7470cc

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"Keep" option for modifications to keep original DICOM identifiers (advanced feature)
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 02 Dec 2016 16:58:35 +0100
parents 5a8840920121
children a3a65de1840f
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "PrecompiledHeadersUnitTests.h"
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34 #include "gtest/gtest.h"
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35
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36 #include "../Core/OrthancException.h"
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37 #include "../Core/DicomFormat/DicomMap.h"
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38 #include "../OrthancServer/FromDcmtkBridge.h"
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39
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40 #include <memory>
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41
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42 using namespace Orthanc;
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43
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44 TEST(DicomMap, MainTags)
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45 {
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46 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID));
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47 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Patient));
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48 ASSERT_FALSE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Study));
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49
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50 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
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51 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_ACCESSION_NUMBER));
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52 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
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53 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SOP_INSTANCE_UID));
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54
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55 std::set<DicomTag> s;
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56 DicomMap::GetMainDicomTags(s);
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57 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID));
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58 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID));
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59 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER));
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60 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID));
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61 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID));
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62
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63 DicomMap::GetMainDicomTags(s, ResourceType_Patient);
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64 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID));
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65 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_STUDY_INSTANCE_UID));
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66
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67 DicomMap::GetMainDicomTags(s, ResourceType_Study);
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68 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID));
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69 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER));
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70 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID));
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71
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72 DicomMap::GetMainDicomTags(s, ResourceType_Series);
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73 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID));
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74 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID));
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75
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76 DicomMap::GetMainDicomTags(s, ResourceType_Instance);
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77 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID));
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78 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID));
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79 }
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80
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81
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82 TEST(DicomMap, Tags)
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83 {
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84 std::set<DicomTag> s;
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85
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86 DicomMap m;
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87 m.GetTags(s);
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88 ASSERT_EQ(0u, s.size());
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89
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90 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_NAME));
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91 ASSERT_FALSE(m.HasTag(0x0010, 0x0010));
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92 m.SetValue(0x0010, 0x0010, "PatientName", false);
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93 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_NAME));
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94 ASSERT_TRUE(m.HasTag(0x0010, 0x0010));
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95
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96 m.GetTags(s);
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97 ASSERT_EQ(1u, s.size());
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98 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin());
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99
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100 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_ID));
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101 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID", false);
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102 ASSERT_TRUE(m.HasTag(0x0010, 0x0020));
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103 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID2", false);
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104 ASSERT_EQ("PatientID2", m.GetValue(0x0010, 0x0020).GetContent());
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105
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106 m.GetTags(s);
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107 ASSERT_EQ(2u, s.size());
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108
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109 m.Remove(DICOM_TAG_PATIENT_ID);
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110 ASSERT_THROW(m.GetValue(0x0010, 0x0020), OrthancException);
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111
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112 m.GetTags(s);
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113 ASSERT_EQ(1u, s.size());
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114 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin());
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115
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116 std::auto_ptr<DicomMap> mm(m.Clone());
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117 ASSERT_EQ("PatientName", mm->GetValue(DICOM_TAG_PATIENT_NAME).GetContent());
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118
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119 m.SetValue(DICOM_TAG_PATIENT_ID, "Hello", false);
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120 ASSERT_THROW(mm->GetValue(DICOM_TAG_PATIENT_ID), OrthancException);
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121 mm->CopyTagIfExists(m, DICOM_TAG_PATIENT_ID);
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122 ASSERT_EQ("Hello", mm->GetValue(DICOM_TAG_PATIENT_ID).GetContent());
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123
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124 DicomValue v;
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125 ASSERT_TRUE(v.IsNull());
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126 }
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127
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128
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129 TEST(DicomMap, FindTemplates)
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130 {
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131 DicomMap m;
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132
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133 DicomMap::SetupFindPatientTemplate(m);
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134 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_ID));
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135
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136 DicomMap::SetupFindStudyTemplate(m);
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137 ASSERT_TRUE(m.HasTag(DICOM_TAG_STUDY_INSTANCE_UID));
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138 ASSERT_TRUE(m.HasTag(DICOM_TAG_ACCESSION_NUMBER));
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139
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140 DicomMap::SetupFindSeriesTemplate(m);
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141 ASSERT_TRUE(m.HasTag(DICOM_TAG_SERIES_INSTANCE_UID));
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142
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143 DicomMap::SetupFindInstanceTemplate(m);
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144 ASSERT_TRUE(m.HasTag(DICOM_TAG_SOP_INSTANCE_UID));
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145 }
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146
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147
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148
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149
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150 static void TestModule(ResourceType level,
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151 DicomModule module)
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152 {
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153 // REFERENCE: DICOM PS3.3 2015c - Information Object Definitions
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154 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html
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155
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156 std::set<DicomTag> moduleTags, main;
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157 DicomTag::AddTagsForModule(moduleTags, module);
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158 DicomMap::GetMainDicomTags(main, level);
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159
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160 // The main dicom tags are a subset of the module
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161 for (std::set<DicomTag>::const_iterator it = main.begin(); it != main.end(); ++it)
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162 {
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163 bool ok = moduleTags.find(*it) != moduleTags.end();
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164
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165 // Exceptions for the Study level
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166 if (level == ResourceType_Study &&
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167 (*it == DicomTag(0x0008, 0x0080) || /* InstitutionName, from Visit identification module, related to Visit */
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168 *it == DicomTag(0x0032, 0x1032) || /* RequestingPhysician, from Imaging Service Request module, related to Study */
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169 *it == DicomTag(0x0032, 0x1060))) /* RequestedProcedureDescription, from Requested Procedure module, related to Study */
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170 {
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171 ok = true;
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172 }
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173
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174 // Exceptions for the Series level
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175 if (level == ResourceType_Series &&
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176 (*it == DicomTag(0x0008, 0x0070) || /* Manufacturer, from General Equipment Module */
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177 *it == DicomTag(0x0008, 0x1010) || /* StationName, from General Equipment Module */
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178 *it == DicomTag(0x0018, 0x0024) || /* SequenceName, from MR Image Module (SIMPLIFICATION => Series) */
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179 *it == DicomTag(0x0018, 0x1090) || /* CardiacNumberOfImages, from MR Image Module (SIMPLIFICATION => Series) */
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180 *it == DicomTag(0x0020, 0x0037) || /* ImageOrientationPatient, from Image Plane Module (SIMPLIFICATION => Series) */
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181 *it == DicomTag(0x0020, 0x0105) || /* NumberOfTemporalPositions, from MR Image Module (SIMPLIFICATION => Series) */
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182 *it == DicomTag(0x0020, 0x1002) || /* ImagesInAcquisition, from General Image Module (SIMPLIFICATION => Series) */
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183 *it == DicomTag(0x0054, 0x0081) || /* NumberOfSlices, from PET Series module */
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184 *it == DicomTag(0x0054, 0x0101) || /* NumberOfTimeSlices, from PET Series module */
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185 *it == DicomTag(0x0054, 0x1000) || /* SeriesType, from PET Series module */
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186 *it == DicomTag(0x0018, 0x1400) || /* AcquisitionDeviceProcessingDescription, from CR/X-Ray/DX/WholeSlideMicro Image (SIMPLIFICATION => Series) */
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187 *it == DicomTag(0x0018, 0x0010))) /* ContrastBolusAgent, from Contrast/Bolus module (SIMPLIFICATION => Series) */
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188 {
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189 ok = true;
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190 }
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191
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192 // Exceptions for the Instance level
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193 if (level == ResourceType_Instance &&
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194 (*it == DicomTag(0x0020, 0x0012) || /* AccessionNumber, from General Image module */
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195 *it == DicomTag(0x0054, 0x1330) || /* ImageIndex, from PET Image module */
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196 *it == DicomTag(0x0020, 0x0100) || /* TemporalPositionIdentifier, from MR Image module */
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197 *it == DicomTag(0x0028, 0x0008) || /* NumberOfFrames, from Multi-frame module attributes, related to Image */
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198 *it == DicomTag(0x0020, 0x0032) || /* ImagePositionPatient, from Image Plan module, related to Image */
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199 *it == DicomTag(0x0020, 0x4000))) /* ImageComments, from General Image module */
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200 {
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201 ok = true;
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202 }
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203
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204 if (!ok)
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205 {
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206 std::cout << it->Format() << ": " << FromDcmtkBridge::GetTagName(*it, "")
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207 << " not expected at level " << EnumerationToString(level) << std::endl;
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208 }
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209
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210 EXPECT_TRUE(ok);
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211 }
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212 }
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213
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214
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215 TEST(DicomMap, Modules)
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216 {
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217 TestModule(ResourceType_Patient, DicomModule_Patient);
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218 TestModule(ResourceType_Study, DicomModule_Study);
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219 TestModule(ResourceType_Series, DicomModule_Series); // TODO
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220 TestModule(ResourceType_Instance, DicomModule_Instance);
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221 }