Mercurial > hg > orthanc
annotate OrthancServer/Sources/Database/PrepareDatabase.sql @ 5464:38f1d06875ad pg-transactions
delete attachment in case of same instance being uploaded multiple times at the same time
| author | Alain Mazy <am@osimis.io> |
|---|---|
| date | Tue, 12 Dec 2023 17:20:10 +0100 |
| parents | 261ce0ed85e6 |
| children | 48b8dae6dc77 |
| rev | line source |
|---|---|
|
4124
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
1 -- Orthanc - A Lightweight, RESTful DICOM Store |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
2 -- Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
3 -- Department, University Hospital of Liege, Belgium |
|
5185
0ea402b4d901
upgrade to year 2023
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
4 -- Copyright (C) 2017-2023 Osimis S.A., Belgium |
|
0ea402b4d901
upgrade to year 2023
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4892
diff
changeset
|
5 -- Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
|
4124
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
6 -- |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
7 -- This program is free software: you can redistribute it and/or |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
8 -- modify it under the terms of the GNU General Public License as |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
9 -- published by the Free Software Foundation, either version 3 of the |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
10 -- License, or (at your option) any later version. |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
11 -- |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
12 -- This program is distributed in the hope that it will be useful, but |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
13 -- WITHOUT ANY WARRANTY; without even the implied warranty of |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
14 -- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
15 -- General Public License for more details. |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
16 -- |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
17 -- You should have received a copy of the GNU General Public License |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
18 -- along with this program. If not, see <http://www.gnu.org/licenses/>. |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
19 |
|
28944db5318b
adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4044
diff
changeset
|
20 |
| 181 | 21 CREATE TABLE GlobalProperties( |
|
206
4453a010d0db
flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
203
diff
changeset
|
22 property INTEGER PRIMARY KEY, |
| 181 | 23 value TEXT |
| 24 ); | |
| 25 | |
| 26 CREATE TABLE Resources( | |
| 27 internalId INTEGER PRIMARY KEY AUTOINCREMENT, | |
| 28 resourceType INTEGER, | |
| 29 publicId TEXT, | |
| 30 parentId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE | |
| 31 ); | |
| 32 | |
|
1159
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
33 CREATE TABLE MainDicomTags( |
| 1158 | 34 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, |
| 35 tagGroup INTEGER, | |
| 36 tagElement INTEGER, | |
| 37 value TEXT, | |
| 38 PRIMARY KEY(id, tagGroup, tagElement) | |
| 39 ); | |
| 40 | |
| 1176 | 41 -- The following table was added in Orthanc 0.8.5 (database v5) |
|
1159
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
42 CREATE TABLE DicomIdentifiers( |
| 181 | 43 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, |
| 44 tagGroup INTEGER, | |
| 45 tagElement INTEGER, | |
| 46 value TEXT, | |
| 47 PRIMARY KEY(id, tagGroup, tagElement) | |
| 48 ); | |
| 49 | |
| 50 CREATE TABLE Metadata( | |
| 51 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, | |
| 52 type INTEGER, | |
| 53 value TEXT, | |
| 54 PRIMARY KEY(id, type) | |
| 55 ); | |
| 56 | |
| 57 CREATE TABLE AttachedFiles( | |
| 58 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, | |
|
197
530a25320461
removal of text as ids in sqlite db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
59 fileType INTEGER, |
| 181 | 60 uuid TEXT, |
| 183 | 61 compressedSize INTEGER, |
| 181 | 62 uncompressedSize INTEGER, |
| 63 compressionType INTEGER, | |
|
693
01d8611c4a60
md5 for attached files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
616
diff
changeset
|
64 uncompressedMD5 TEXT, -- New in Orthanc 0.7.3 (database v4) |
|
01d8611c4a60
md5 for attached files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
616
diff
changeset
|
65 compressedMD5 TEXT, -- New in Orthanc 0.7.3 (database v4) |
|
197
530a25320461
removal of text as ids in sqlite db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
192
diff
changeset
|
66 PRIMARY KEY(id, fileType) |
| 181 | 67 ); |
| 68 | |
| 183 | 69 CREATE TABLE Changes( |
| 70 seq INTEGER PRIMARY KEY AUTOINCREMENT, | |
| 71 changeType INTEGER, | |
|
189
ccbc2cf64a0d
record main dicom tags and changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
72 internalId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, |
| 183 | 73 resourceType INTEGER, |
| 74 date TEXT | |
| 75 ); | |
| 76 | |
| 231 | 77 CREATE TABLE ExportedResources( |
| 183 | 78 seq INTEGER PRIMARY KEY AUTOINCREMENT, |
| 231 | 79 resourceType INTEGER, |
| 80 publicId TEXT, | |
| 183 | 81 remoteModality TEXT, |
| 82 patientId TEXT, | |
| 83 studyInstanceUid TEXT, | |
| 84 seriesInstanceUid TEXT, | |
| 85 sopInstanceUid TEXT, | |
| 86 date TEXT | |
| 87 ); | |
| 88 | |
|
262
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
89 CREATE TABLE PatientRecyclingOrder( |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
90 seq INTEGER PRIMARY KEY AUTOINCREMENT, |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
91 patientId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
92 ); |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
93 |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5185
diff
changeset
|
94 -- New in Orthanc 1.12.0 |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5185
diff
changeset
|
95 CREATE TABLE Labels( |
| 5256 | 96 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE, |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
97 label TEXT NOT NULL, |
| 5256 | 98 PRIMARY KEY(id, label) -- Prevents duplicates |
|
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5185
diff
changeset
|
99 ); |
|
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5185
diff
changeset
|
100 |
| 181 | 101 CREATE INDEX ChildrenIndex ON Resources(parentId); |
| 102 CREATE INDEX PublicIndex ON Resources(publicId); | |
| 190 | 103 CREATE INDEX ResourceTypeIndex ON Resources(resourceType); |
|
262
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
104 CREATE INDEX PatientRecyclingIndex ON PatientRecyclingOrder(patientId); |
| 181 | 105 |
|
1159
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
106 CREATE INDEX MainDicomTagsIndex1 ON MainDicomTags(id); |
| 1176 | 107 -- The 2 following indexes were removed in Orthanc 0.8.5 (database v5), to speed up |
|
1159
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
108 -- CREATE INDEX MainDicomTagsIndex2 ON MainDicomTags(tagGroup, tagElement); |
|
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
109 -- CREATE INDEX MainDicomTagsIndexValues ON MainDicomTags(value COLLATE BINARY); |
|
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
110 |
| 1176 | 111 -- The 3 following indexes were added in Orthanc 0.8.5 (database v5) |
|
1159
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
112 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id); |
|
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
113 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement); |
|
8f9d49192815
speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1158
diff
changeset
|
114 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY); |
| 183 | 115 |
|
189
ccbc2cf64a0d
record main dicom tags and changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
183
diff
changeset
|
116 CREATE INDEX ChangesIndex ON Changes(internalId); |
| 181 | 117 |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
118 -- New in Orthanc 1.12.0 |
| 5256 | 119 CREATE INDEX LabelsIndex1 ON Labels(id); |
|
5227
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
120 CREATE INDEX LabelsIndex2 ON Labels(label); -- This index allows efficient lookups |
|
988dab8deb1c
"/tools/find" accepts the "WithLabels" and "WithoutLabels" arguments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5221
diff
changeset
|
121 |
| 181 | 122 CREATE TRIGGER AttachedFileDeleted |
| 123 AFTER DELETE ON AttachedFiles | |
| 124 BEGIN | |
|
273
d384af918264
more detailed signal about deleted file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
125 SELECT SignalFileDeleted(old.uuid, old.fileType, old.uncompressedSize, |
|
693
01d8611c4a60
md5 for attached files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
616
diff
changeset
|
126 old.compressionType, old.compressedSize, |
|
694
72dc919a028c
upgrade database from v3 to v4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
693
diff
changeset
|
127 -- These 2 arguments are new in Orthanc 0.7.3 (database v4) |
|
693
01d8611c4a60
md5 for attached files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
616
diff
changeset
|
128 old.uncompressedMD5, old.compressedMD5); |
| 181 | 129 END; |
| 130 | |
| 131 CREATE TRIGGER ResourceDeleted | |
| 132 AFTER DELETE ON Resources | |
| 133 BEGIN | |
| 1176 | 134 SELECT SignalResourceDeleted(old.publicId, old.resourceType); -- New in Orthanc 0.8.5 (db v5) |
| 183 | 135 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType) |
| 136 FROM Resources AS parent WHERE internalId = old.parentId; | |
| 181 | 137 END; |
| 138 | |
| 183 | 139 -- Delete a parent resource when its unique child is deleted |
| 140 CREATE TRIGGER ResourceDeletedParentCleaning | |
| 141 AFTER DELETE ON Resources | |
| 142 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0 | |
| 143 BEGIN | |
| 144 DELETE FROM Resources WHERE internalId = old.parentId; | |
| 145 END; | |
| 252 | 146 |
|
262
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
147 CREATE TRIGGER PatientAdded |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
148 AFTER INSERT ON Resources |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
149 FOR EACH ROW WHEN new.resourceType = 1 -- "1" corresponds to "ResourceType_Patient" in C++ |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
150 BEGIN |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
151 INSERT INTO PatientRecyclingOrder VALUES (NULL, new.internalId); |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
152 END; |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
153 |
|
2354560daf2f
primitives for recycling patients
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
252
diff
changeset
|
154 |
| 252 | 155 -- Set the version of the database schema |
| 156 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration | |
|
1668
de1413733c97
reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1176
diff
changeset
|
157 INSERT INTO GlobalProperties VALUES (1, "6"); |