Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomNetworking/DicomFindAnswers.cpp @ 4224:38d446c9ee1d
fix
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Wed, 30 Sep 2020 17:59:09 +0200 |
| parents | 318c16cfccab |
| children | 0034f855c023 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
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8 * modify it under the terms of the GNU Lesser General Public License |
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9 * as published by the Free Software Foundation, either version 3 of |
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10 * the License, or (at your option) any later version. |
| 136 | 11 * |
| 0 | 12 * This program is distributed in the hope that it will be useful, but |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
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15 * Lesser General Public License for more details. |
| 0 | 16 * |
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17 * You should have received a copy of the GNU Lesser General Public |
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18 * License along with this program. If not, see |
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19 * <http://www.gnu.org/licenses/>. |
| 0 | 20 **/ |
| 21 | |
| 22 | |
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23 #include "../PrecompiledHeaders.h" |
| 0 | 24 #include "DicomFindAnswers.h" |
| 25 | |
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26 #include "../DicomParsing/FromDcmtkBridge.h" |
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27 #include "../OrthancException.h" |
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28 |
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29 #include <memory> |
| 1789 | 30 #include <dcmtk/dcmdata/dcfilefo.h> |
| 1847 | 31 #include <boost/noncopyable.hpp> |
| 1789 | 32 |
| 0 | 33 |
| 62 | 34 namespace Orthanc |
| 0 | 35 { |
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36 void DicomFindAnswers::AddAnswerInternal(ParsedDicomFile* answer) |
| 1789 | 37 { |
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38 std::unique_ptr<ParsedDicomFile> protection(answer); |
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39 |
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40 if (isWorklist_) |
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41 { |
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42 // These lines are necessary when serving worklists, otherwise |
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43 // Orthanc does not behave as "wlmscpfs" |
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44 protection->Remove(DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID); |
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45 protection->Remove(DICOM_TAG_SOP_INSTANCE_UID); |
| 1789 | 46 } |
| 47 | |
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48 protection->ChangeEncoding(encoding_); |
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49 |
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50 answers_.push_back(protection.release()); |
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51 } |
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52 |
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53 |
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54 DicomFindAnswers::DicomFindAnswers(bool isWorklist) : |
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55 encoding_(GetDefaultDicomEncoding()), |
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56 isWorklist_(isWorklist), |
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57 complete_(true) |
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58 { |
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59 } |
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60 |
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61 |
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62 void DicomFindAnswers::SetEncoding(Encoding encoding) |
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63 { |
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64 for (size_t i = 0; i < answers_.size(); i++) |
| 1789 | 65 { |
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66 assert(answers_[i] != NULL); |
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67 answers_[i]->ChangeEncoding(encoding); |
| 1789 | 68 } |
| 69 | |
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70 encoding_ = encoding; |
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71 } |
| 1789 | 72 |
| 73 | |
| 2059 | 74 void DicomFindAnswers::SetWorklist(bool isWorklist) |
| 75 { | |
| 76 if (answers_.empty()) | |
| 77 { | |
| 78 isWorklist_ = isWorklist; | |
| 79 } | |
| 80 else | |
| 81 { | |
| 82 // This set of answers is not empty anymore, cannot change its type | |
| 83 throw OrthancException(ErrorCode_BadSequenceOfCalls); | |
| 84 } | |
| 85 } | |
| 86 | |
| 87 | |
| 0 | 88 void DicomFindAnswers::Clear() |
| 89 { | |
| 1789 | 90 for (size_t i = 0; i < answers_.size(); i++) |
| 0 | 91 { |
| 1789 | 92 assert(answers_[i] != NULL); |
| 93 delete answers_[i]; | |
| 0 | 94 } |
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95 |
| 1789 | 96 answers_.clear(); |
| 0 | 97 } |
| 98 | |
| 1789 | 99 |
| 0 | 100 void DicomFindAnswers::Reserve(size_t size) |
| 101 { | |
| 1789 | 102 if (size > answers_.size()) |
| 0 | 103 { |
| 1789 | 104 answers_.reserve(size); |
| 0 | 105 } |
| 106 } | |
| 107 | |
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108 |
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109 void DicomFindAnswers::Add(const DicomMap& map) |
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110 { |
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111 // We use the permissive mode to be tolerant wrt. invalid DICOM |
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112 // files that contain some tags with out-of-range values (such |
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113 // tags are removed from the answers) |
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114 AddAnswerInternal(new ParsedDicomFile(map, encoding_, true /* permissive */)); |
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115 //"" /* no private creator */)); |
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116 } |
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117 |
| 1789 | 118 |
| 4204 | 119 void DicomFindAnswers::Add(const ParsedDicomFile& dicom) |
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120 { |
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121 AddAnswerInternal(dicom.Clone(true)); |
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122 } |
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123 |
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124 void DicomFindAnswers::Add(const void* dicom, |
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125 size_t size) |
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126 { |
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127 AddAnswerInternal(new ParsedDicomFile(dicom, size)); |
| 1789 | 128 } |
| 129 | |
| 130 | |
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131 ParsedDicomFile& DicomFindAnswers::GetAnswer(size_t index) const |
| 1789 | 132 { |
| 133 if (index < answers_.size()) | |
| 134 { | |
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135 return *answers_[index]; |
| 1789 | 136 } |
| 137 else | |
| 138 { | |
| 139 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 140 } | |
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141 } |
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142 |
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143 |
| 1789 | 144 DcmDataset* DicomFindAnswers::ExtractDcmDataset(size_t index) const |
| 145 { | |
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146 // As "DicomFindAnswers" stores its content using class |
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147 // "ParsedDicomFile" (that internally uses "DcmFileFormat" from |
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148 // DCMTK), the dataset can contain tags that are reserved if |
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149 // storing the media on the disk, notably tag |
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150 // "MediaStorageSOPClassUID" (0002,0002). In this function, we |
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151 // remove all those tags whose group is below 0x0008. The |
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152 // resulting data set is clean for emission in the C-FIND SCP. |
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153 |
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154 // http://dicom.nema.org/medical/dicom/current/output/chtml/part04/sect_C.4.html#sect_C.4.1.1.3 |
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155 // https://groups.google.com/d/msg/orthanc-users/D3kpPuX8yV0/_zgHOzkMEQAJ |
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156 |
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157 DcmDataset& source = *GetAnswer(index).GetDcmtkObject().getDataset(); |
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158 |
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159 std::unique_ptr<DcmDataset> target(new DcmDataset); |
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160 |
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161 for (unsigned long i = 0; i < source.card(); i++) |
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162 { |
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163 const DcmElement* element = source.getElement(i); |
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164 assert(element != NULL); |
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165 |
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166 if (element != NULL && |
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167 element->getTag().getGroup() >= 0x0008 && |
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168 element->getTag().getElement() != 0x0000) |
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169 { |
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170 target->insert(dynamic_cast<DcmElement*>(element->clone())); |
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171 } |
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172 } |
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173 |
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174 return target.release(); |
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175 } |
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176 |
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177 |
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178 void DicomFindAnswers::ToJson(Json::Value& target, |
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179 size_t index, |
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180 bool simplify) const |
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181 { |
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182 DicomToJsonFormat format = (simplify ? DicomToJsonFormat_Human : DicomToJsonFormat_Full); |
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183 GetAnswer(index).DatasetToJson(target, format, DicomToJsonFlags_None, 0); |
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184 } |
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185 |
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186 |
| 1368 | 187 void DicomFindAnswers::ToJson(Json::Value& target, |
| 188 bool simplify) const | |
| 0 | 189 { |
| 190 target = Json::arrayValue; | |
| 191 | |
| 192 for (size_t i = 0; i < GetSize(); i++) | |
| 193 { | |
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194 Json::Value answer; |
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195 ToJson(answer, i, simplify); |
| 0 | 196 target.append(answer); |
| 197 } | |
| 198 } | |
| 199 } |