Mercurial > hg > orthanc

annotate OrthancServer/OrthancInitialization.cpp @ 3703:2eeaa076c8f6 storage-commitment

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integration mainline->storage-commitment
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 26 Feb 2020 14:36:58 +0100
parents 94f4a18a79cc
children 914b15dedae3
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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33
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34 #include "PrecompiledHeadersServer.h"
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36 #if defined(_WIN32)
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37 // "Please include winsock2.h before windows.h"
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38 # include <winsock2.h>
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39 #endif
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40
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41 #include "OrthancInitialization.h"
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42
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43 #include "../Core/DicomParsing/FromDcmtkBridge.h"
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44 #include "../Core/FileStorage/FilesystemStorage.h"
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45 #include "../Core/Logging.h"
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46 #include "../Core/OrthancException.h"
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47
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48 #include "Database/SQLiteDatabaseWrapper.h"
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49 #include "OrthancConfiguration.h"
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50
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51 #include <dcmtk/dcmnet/dul.h> // For dcmDisableGethostbyaddr()
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54
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55 namespace Orthanc
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56 {
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57 static void RegisterUserMetadata(const Json::Value& config)
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58 {
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59 if (config.isMember("UserMetadata"))
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60 {
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61 const Json::Value& parameter = config["UserMetadata"];
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63 Json::Value::Members members = parameter.getMemberNames();
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64 for (size_t i = 0; i < members.size(); i++)
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65 {
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66 const std::string& name = members[i];
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67
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68 if (!parameter[name].isInt())
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69 {
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70 throw OrthancException(ErrorCode_BadParameterType,
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71 "Not a number in this user-defined metadata: " + name);
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72 }
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73
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74 int metadata = parameter[name].asInt();
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76 LOG(INFO) << "Registering user-defined metadata: " << name << " (index "
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77 << metadata << ")";
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79 try
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80 {
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81 RegisterUserMetadata(metadata, name);
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82 }
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83 catch (OrthancException&)
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84 {
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85 LOG(ERROR) << "Cannot register this user-defined metadata: " << name;
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86 throw;
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87 }
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88 }
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89 }
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90 }
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93 static void RegisterUserContentType(const Json::Value& config)
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94 {
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95 if (config.isMember("UserContentType"))
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96 {
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97 const Json::Value& parameter = config["UserContentType"];
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98
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99 Json::Value::Members members = parameter.getMemberNames();
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100 for (size_t i = 0; i < members.size(); i++)
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101 {
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102 const std::string& name = members[i];
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103 std::string mime = MIME_BINARY;
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104
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105 const Json::Value& value = parameter[name];
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106 int contentType;
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107
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108 if (value.isArray() &&
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109 value.size() == 2 &&
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110 value[0].isInt() &&
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111 value[1].isString())
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112 {
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113 contentType = value[0].asInt();
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114 mime = value[1].asString();
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115 }
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116 else if (value.isInt())
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117 {
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118 contentType = value.asInt();
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119 }
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120 else
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121 {
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122 throw OrthancException(ErrorCode_BadParameterType,
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123 "Not a number in this user-defined attachment type: " + name);
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124 }
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125
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126 LOG(INFO) << "Registering user-defined attachment type: " << name << " (index "
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127 << contentType << ") with MIME type \"" << mime << "\"";
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129 try
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130 {
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131 RegisterUserContentType(contentType, name, mime);
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132 }
4c1860179cc5 dictionary of user-defined content types
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diff changeset
133 catch (OrthancException&)
4c1860179cc5 dictionary of user-defined content types
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diff changeset
134 {
4c1860179cc5 dictionary of user-defined content types
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diff changeset
135 throw;
4c1860179cc5 dictionary of user-defined content types
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diff changeset
136 }
4c1860179cc5 dictionary of user-defined content types
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parents: 690
diff changeset
137 }
4c1860179cc5 dictionary of user-defined content types
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 690
diff changeset
138 }
4c1860179cc5 dictionary of user-defined content types
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diff changeset
139 }
4c1860179cc5 dictionary of user-defined content types
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diff changeset
140
4c1860179cc5 dictionary of user-defined content types
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diff changeset
141
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142 static void LoadCustomDictionary(const Json::Value& configuration)
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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143 {
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diff changeset
144 if (configuration.type() != Json::objectValue ||
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145 !configuration.isMember("Dictionary") ||
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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146 configuration["Dictionary"].type() != Json::objectValue)
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diff changeset
147 {
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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diff changeset
148 return;
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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149 }
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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150
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151 Json::Value::Members tags(configuration["Dictionary"].getMemberNames());
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152
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153 for (Json::Value::ArrayIndex i = 0; i < tags.size(); i++)
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154 {
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155 const Json::Value& content = configuration["Dictionary"][tags[i]];
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156 if (content.type() != Json::arrayValue ||
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157 content.size() < 2 ||
2115
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158 content.size() > 5 ||
1765
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159 content[0].type() != Json::stringValue ||
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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160 content[1].type() != Json::stringValue ||
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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161 (content.size() >= 3 && content[2].type() != Json::intValue) ||
2115
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162 (content.size() >= 4 && content[3].type() != Json::intValue) ||
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163 (content.size() >= 5 && content[4].type() != Json::stringValue))
1765
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164 {
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165 throw OrthancException(ErrorCode_BadFileFormat);
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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166 }
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167
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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168 DicomTag tag(FromDcmtkBridge::ParseTag(tags[i]));
2006
6301bbcbcaed more generic support of value representations
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169 ValueRepresentation vr = StringToValueRepresentation(content[0].asString(), true);
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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170 std::string name = content[1].asString();
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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171 unsigned int minMultiplicity = (content.size() >= 2) ? content[2].asUInt() : 1;
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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172 unsigned int maxMultiplicity = (content.size() >= 3) ? content[3].asUInt() : 1;
2115
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173 std::string privateCreator = (content.size() >= 4) ? content[4].asString() : "";
1765
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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diff changeset
174
2115
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diff changeset
175 FromDcmtkBridge::RegisterDictionaryTag(tag, vr, name, minMultiplicity, maxMultiplicity, privateCreator);
1765
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176 }
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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diff changeset
177 }
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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diff changeset
178
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags
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diff changeset
179
2022
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
180 static void ConfigurePkcs11(const Json::Value& config)
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
181 {
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
182 if (config.type() != Json::objectValue ||
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diff changeset
183 !config.isMember("Module") ||
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
184 config["Module"].type() != Json::stringValue)
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
185 {
2955
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186 throw OrthancException(ErrorCode_BadFileFormat,
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187 "No path to the PKCS#11 module (DLL or .so) is provided "
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188 "for HTTPS client authentication");
2022
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
189 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
190
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
191 std::string pin;
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
192 if (config.isMember("Pin"))
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
193 {
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
194 if (config["Pin"].type() == Json::stringValue)
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
195 {
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diff changeset
196 pin = config["Pin"].asString();
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
197 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
198 else
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
199 {
2955
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200 throw OrthancException(ErrorCode_BadFileFormat,
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diff changeset
201 "The PIN number in the PKCS#11 configuration must be a string");
2022
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
202 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
203 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
204
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
205 bool verbose = false;
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
206 if (config.isMember("Verbose"))
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
207 {
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
208 if (config["Verbose"].type() == Json::booleanValue)
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
209 {
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
210 verbose = config["Verbose"].asBool();
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
211 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
212 else
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
213 {
2955
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diff changeset
214 throw OrthancException(ErrorCode_BadFileFormat,
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diff changeset
215 "The Verbose option in the PKCS#11 configuration must be a Boolean");
2022
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
216 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
217 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
218
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
219 HttpClient::InitializePkcs11(config["Module"].asString(), pin, verbose);
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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diff changeset
220 }
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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parents: 2020
diff changeset
221
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
222
1656
d3ba98d6b6e9 refactoring
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parents: 1610
diff changeset
223
62
a70bb32802ae renaming Server
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parents: 58
diff changeset
224 void OrthancInitialize(const char* configurationFile)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
225 {
2940
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diff changeset
226 OrthancConfiguration::WriterLock lock;
435
28ba73274919 registration of user-defined metadata
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parents: 430
diff changeset
227
2677
0196d07a900f migrate OpenSSL initialization to Toolbox
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diff changeset
228 Toolbox::InitializeOpenSsl();
1526
096a8af528c9 fix streams, initialization/finalization of libcurl and openssl
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parents: 1485
diff changeset
229
435
28ba73274919 registration of user-defined metadata
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parents: 430
diff changeset
230 InitializeServerEnumerations();
1423
7b7d597a190c The configuration can be splitted into several files stored inside the same folder
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parents: 1422
diff changeset
231
7b7d597a190c The configuration can be splitted into several files stored inside the same folder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1422
diff changeset
232 // Read the user-provided configuration
2940
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
233 lock.GetConfiguration().Read(configurationFile);
435
28ba73274919 registration of user-defined metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 430
diff changeset
234
2940
4767d36679ed refactoring access to Orthanc configuration
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parents: 2933
diff changeset
235 if (lock.GetJson().isMember("Locale"))
2330
9c7a80c87ae9 "Locale" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2326
diff changeset
236 {
2940
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
237 std::string locale = lock.GetConfiguration().GetStringParameter("Locale", "");
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2933
diff changeset
238 Toolbox::InitializeGlobalLocale(lock.GetJson()["Locale"].asCString());
2330
9c7a80c87ae9 "Locale" configuration option
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parents: 2326
diff changeset
239 }
9c7a80c87ae9 "Locale" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2326
diff changeset
240 else
9c7a80c87ae9 "Locale" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2326
diff changeset
241 {
9c7a80c87ae9 "Locale" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2326
diff changeset
242 Toolbox::InitializeGlobalLocale(NULL);
9c7a80c87ae9 "Locale" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2326
diff changeset
243 }
9c7a80c87ae9 "Locale" configuration option
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parents: 2326
diff changeset
244
2940
4767d36679ed refactoring access to Orthanc configuration
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parents: 2933
diff changeset
245 if (lock.GetJson().isMember("DefaultEncoding"))
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
246 {
2940
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
247 std::string encoding = lock.GetConfiguration().GetStringParameter("DefaultEncoding", "");
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
248 SetDefaultDicomEncoding(StringToEncoding(encoding.c_str()));
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
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parents: 2380
diff changeset
249 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
250 else
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
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parents: 2380
diff changeset
251 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
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parents: 2380
diff changeset
252 SetDefaultDicomEncoding(ORTHANC_DEFAULT_DICOM_ENCODING);
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
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parents: 2380
diff changeset
253 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
254
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2933
diff changeset
255 if (lock.GetJson().isMember("Pkcs11"))
2022
fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2020
diff changeset
256 {
2940
4767d36679ed refactoring access to Orthanc configuration
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parents: 2933
diff changeset
257 ConfigurePkcs11(lock.GetJson()["Pkcs11"]);
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fefbe71c2272 Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers
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258 }
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259
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260 HttpClient::GlobalInitialize();
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261
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262 RegisterUserMetadata(lock.GetJson());
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263 RegisterUserContentType(lock.GetJson());
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264
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265 bool loadPrivate = lock.GetConfiguration().GetBooleanParameter("LoadPrivateDictionary", true);
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266 FromDcmtkBridge::InitializeDictionary(loadPrivate);
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267 LoadCustomDictionary(lock.GetJson());
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268
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269 FromDcmtkBridge::InitializeCodecs();
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270
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271 lock.GetConfiguration().RegisterFont(EmbeddedResources::FONT_UBUNTU_MONO_BOLD_16);
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272
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273 /* Disable "gethostbyaddr" (which results in memory leaks) and use raw IP addresses */
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274 dcmDisableGethostbyaddr.set(OFTrue);
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275 }
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276
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277
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278
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279 void OrthancFinalize()
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280 {
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281 OrthancConfiguration::WriterLock lock;
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282
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283 HttpClient::GlobalFinalize();
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284 FromDcmtkBridge::FinalizeCodecs();
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285 Toolbox::FinalizeOpenSsl();
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286 Toolbox::FinalizeGlobalLocale();
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287 }
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288
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289
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290 static IDatabaseWrapper* CreateSQLiteWrapper()
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291 {
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292 OrthancConfiguration::ReaderLock lock;
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293
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294 std::string storageDirectoryStr =
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295 lock.GetConfiguration().GetStringParameter("StorageDirectory", "OrthancStorage");
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296
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297 // Open the database
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298 boost::filesystem::path indexDirectory = lock.GetConfiguration().InterpretStringParameterAsPath(
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299 lock.GetConfiguration().GetStringParameter("IndexDirectory", storageDirectoryStr));
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300
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301 LOG(WARNING) << "SQLite index directory: " << indexDirectory;
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302
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303 try
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304 {
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305 boost::filesystem::create_directories(indexDirectory);
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306 }
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307 catch (boost::filesystem::filesystem_error&)
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308 {
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309 }
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310
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311 return new SQLiteDatabaseWrapper(indexDirectory.string() + "/index");
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312 }
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313
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314
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315 namespace
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316 {
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317 // Anonymous namespace to avoid clashes between compilation modules
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318
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319 class FilesystemStorageWithoutDicom : public IStorageArea
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320 {
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321 private:
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322 FilesystemStorage storage_;
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323
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324 public:
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325 FilesystemStorageWithoutDicom(const std::string& path) : storage_(path)
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326 {
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327 }
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328
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329 virtual void Create(const std::string& uuid,
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330 const void* content,
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331 size_t size,
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332 FileContentType type)
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333 {
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334 if (type != FileContentType_Dicom)
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335 {
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336 storage_.Create(uuid, content, size, type);
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337 }
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338 }
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339
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340 virtual void Read(std::string& content,
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341 const std::string& uuid,
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342 FileContentType type)
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343 {
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344 if (type != FileContentType_Dicom)
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345 {
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346 storage_.Read(content, uuid, type);
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347 }
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348 else
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349 {
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350 throw OrthancException(ErrorCode_UnknownResource);
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351 }
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352 }
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353
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354 virtual void Remove(const std::string& uuid,
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355 FileContentType type)
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356 {
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357 if (type != FileContentType_Dicom)
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358 {
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359 storage_.Remove(uuid, type);
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360 }
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361 }
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362 };
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363 }
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364
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365
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366 static IStorageArea* CreateFilesystemStorage()
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367 {
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368 OrthancConfiguration::ReaderLock lock;
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369
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370 std::string storageDirectoryStr =
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371 lock.GetConfiguration().GetStringParameter("StorageDirectory", "OrthancStorage");
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372
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373 boost::filesystem::path storageDirectory =
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374 lock.GetConfiguration().InterpretStringParameterAsPath(storageDirectoryStr);
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375
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376 LOG(WARNING) << "Storage directory: " << storageDirectory;
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377
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378 if (lock.GetConfiguration().GetBooleanParameter("StoreDicom", true))
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379 {
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380 return new FilesystemStorage(storageDirectory.string());
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381 }
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382 else
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383 {
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384 LOG(WARNING) << "The DICOM files will not be stored, Orthanc running in index-only mode";
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385 return new FilesystemStorageWithoutDicom(storageDirectory.string());
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386 }
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387 }
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388
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389
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390 IDatabaseWrapper* CreateDatabaseWrapper()
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391 {
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392 return CreateSQLiteWrapper();
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393 }
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394
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395
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396 IStorageArea* CreateStorageArea()
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397 {
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398 return CreateFilesystemStorage();
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399 }
0
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400 }