Mercurial > hg > orthanc
annotate OrthancServer/Sources/OrthancRestApi/OrthancRestApi.cpp @ 4959:29bcc3f47f2a
typos
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 23 Mar 2022 12:19:59 +0100 |
parents | 6eff25f70121 |
children | 8422e4f99a18 |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "../PrecompiledHeadersServer.h" |
230 | 24 #include "OrthancRestApi.h" |
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25 |
4045 | 26 #include "../../../OrthancFramework/Sources/Compression/GzipCompressor.h" |
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27 #include "../../../OrthancFramework/Sources/Compression/ZipReader.h" |
4045 | 28 #include "../../../OrthancFramework/Sources/Logging.h" |
29 #include "../../../OrthancFramework/Sources/MetricsRegistry.h" | |
30 #include "../../../OrthancFramework/Sources/SerializationToolbox.h" | |
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31 #include "../OrthancConfiguration.h" |
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32 #include "../ServerContext.h" |
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33 |
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34 #include <boost/algorithm/string/predicate.hpp> |
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35 |
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36 namespace Orthanc |
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37 { |
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38 static void SetupResourceAnswer(Json::Value& result, |
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39 const std::string& publicId, |
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40 ResourceType resourceType, |
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41 StoreStatus status) |
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42 { |
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43 result = Json::objectValue; |
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44 |
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45 if (status != StoreStatus_Failure) |
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46 { |
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47 result["ID"] = publicId; |
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48 result["Path"] = GetBasePath(resourceType, publicId); |
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49 } |
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50 |
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51 result["Status"] = EnumerationToString(status); |
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52 } |
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53 |
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54 |
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55 static void SetupResourceAnswer(Json::Value& result, |
4519 | 56 const DicomInstanceToStore& instance, |
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57 StoreStatus status, |
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58 const std::string& instanceId) |
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59 { |
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60 SetupResourceAnswer(result, instanceId, ResourceType_Instance, status); |
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61 |
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62 DicomMap summary; |
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63 instance.GetSummary(summary); |
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64 |
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65 DicomInstanceHasher hasher(summary); |
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66 result["ParentPatient"] = hasher.HashPatient(); |
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67 result["ParentStudy"] = hasher.HashStudy(); |
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68 result["ParentSeries"] = hasher.HashSeries(); |
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69 } |
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70 |
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71 |
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72 void OrthancRestApi::AnswerStoredInstance(RestApiPostCall& call, |
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73 DicomInstanceToStore& instance, |
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74 StoreStatus status, |
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75 const std::string& instanceId) const |
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76 { |
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77 Json::Value result; |
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78 SetupResourceAnswer(result, instance, status, instanceId); |
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79 call.GetOutput().AnswerJson(result); |
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80 } |
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81 |
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82 |
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83 void OrthancRestApi::AnswerStoredResource(RestApiPostCall& call, |
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84 const std::string& publicId, |
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85 ResourceType resourceType, |
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86 StoreStatus status) const |
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87 { |
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88 Json::Value result; |
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89 SetupResourceAnswer(result, publicId, resourceType, status); |
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90 call.GetOutput().AnswerJson(result); |
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91 } |
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92 |
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93 |
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94 void OrthancRestApi::ResetOrthanc(RestApiPostCall& call) |
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95 { |
4403 | 96 if (call.IsDocumentation()) |
97 { | |
98 call.GetDocumentation() | |
99 .SetTag("System") | |
100 .SetSummary("Restart Orthanc"); | |
101 return; | |
102 } | |
103 | |
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104 OrthancRestApi::GetApi(call).leaveBarrier_ = true; |
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105 OrthancRestApi::GetApi(call).resetRequestReceived_ = true; |
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106 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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107 } |
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108 |
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109 |
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110 void OrthancRestApi::ShutdownOrthanc(RestApiPostCall& call) |
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111 { |
4403 | 112 if (call.IsDocumentation()) |
113 { | |
114 call.GetDocumentation() | |
115 .SetTag("System") | |
116 .SetSummary("Shutdown Orthanc"); | |
117 return; | |
118 } | |
119 | |
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120 OrthancRestApi::GetApi(call).leaveBarrier_ = true; |
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121 call.GetOutput().AnswerBuffer("{}", MimeType_Json); |
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122 LOG(WARNING) << "Shutdown request received"; |
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123 } |
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124 |
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125 |
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126 |
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127 |
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128 |
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129 // Upload of DICOM files through HTTP --------------------------------------- |
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130 |
974 | 131 static void UploadDicomFile(RestApiPostCall& call) |
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132 { |
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133 if (call.GetRequestOrigin() == RequestOrigin_Documentation) |
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134 { |
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135 Json::Value sample = Json::objectValue; |
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136 sample["ID"] = "19816330-cb02e1cf-df3a8fe8-bf510623-ccefe9f5"; |
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137 sample["ParentPatient"] = "ef9d77db-eb3b2bef-9b31fd3e-bf42ae46-dbdb0cc3"; |
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138 sample["ParentSeries"] = "3774320f-ccda46d8-69ee8641-9e791cbf-3ecbbcc6"; |
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139 sample["ParentStudy"] = "66c8e41e-ac3a9029-0b85e42a-8195ee0a-92c2e62e"; |
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140 sample["Path"] = "/instances/19816330-cb02e1cf-df3a8fe8-bf510623-ccefe9f5"; |
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141 sample["Status"] = "Success"; |
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142 |
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143 call.GetDocumentation() |
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144 .SetTag("Instances") |
4403 | 145 .SetSummary("Upload DICOM instances") |
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146 .AddRequestType(MimeType_Dicom, "DICOM file to be uploaded") |
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147 .AddRequestType(MimeType_Zip, "ZIP archive containing DICOM files (new in Orthanc 1.8.2)") |
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148 .AddAnswerType(MimeType_Json, "Information about the uploaded instance, " |
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149 "or list of information for each uploaded instance in the case of ZIP archive") |
4404 | 150 .SetAnswerField("ID", RestApiCallDocumentation::Type_String, "Orthanc identifier of the new instance") |
151 .SetAnswerField("Path", RestApiCallDocumentation::Type_String, "Path to the new instance in the REST API") | |
152 .SetAnswerField("Status", RestApiCallDocumentation::Type_String, "Can be `Success`, `AlreadyStored`, `Failure`, or `FilteredOut` (removed by some `NewInstanceFilter`)") | |
4413 | 153 .SetAnswerField("ParentPatient", RestApiCallDocumentation::Type_String, "Orthanc identifier of the parent patient") |
154 .SetAnswerField("ParentStudy", RestApiCallDocumentation::Type_String, "Orthanc identifier of the parent study") | |
155 .SetAnswerField("ParentSeries", RestApiCallDocumentation::Type_String, "Orthanc identifier of the parent series") | |
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156 .SetSample(sample); |
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157 return; |
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158 } |
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159 |
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160 ServerContext& context = OrthancRestApi::GetContext(call); |
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161 |
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162 CLOG(INFO, HTTP) << "Receiving a DICOM file of " << call.GetBodySize() << " bytes through HTTP"; |
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163 |
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164 if (call.GetBodySize() == 0) |
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165 { |
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166 throw OrthancException(ErrorCode_BadFileFormat, |
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167 "Received an empty DICOM file"); |
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168 } |
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169 |
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170 if (ZipReader::IsZipMemoryBuffer(call.GetBodyData(), call.GetBodySize())) |
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171 { |
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172 // New in Orthanc 1.8.2 |
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173 std::unique_ptr<ZipReader> reader(ZipReader::CreateFromMemory(call.GetBodyData(), call.GetBodySize())); |
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174 |
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175 Json::Value answer = Json::arrayValue; |
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176 |
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177 std::string filename, content; |
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178 while (reader->ReadNextFile(filename, content)) |
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179 { |
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180 if (!content.empty()) |
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181 { |
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182 LOG(INFO) << "Uploading DICOM file from ZIP archive: " << filename; |
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183 |
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184 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromBuffer(content)); |
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185 toStore->SetOrigin(DicomInstanceOrigin::FromRest(call)); |
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186 |
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187 std::string publicId; |
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188 |
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189 try |
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190 { |
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191 ServerContext::StoreResult result = context.Store(publicId, *toStore, StoreInstanceMode_Default); |
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192 |
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193 Json::Value info; |
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194 SetupResourceAnswer(info, *toStore, result.GetStatus(), publicId); |
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195 answer.append(info); |
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196 } |
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197 catch (OrthancException& e) |
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198 { |
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199 if (e.GetErrorCode() == ErrorCode_BadFileFormat) |
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200 { |
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201 LOG(ERROR) << "Cannot import non-DICOM file from ZIP archive: " << filename; |
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202 } |
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203 else if (e.GetErrorCode() == ErrorCode_InexistentTag) |
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204 { |
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205 /** |
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206 * Allow upload of ZIP archives containing a DICOMDIR |
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207 * file (new in Orthanc 1.9.7): |
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208 * https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
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209 **/ |
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210 LOG(ERROR) << "Ignoring what is probably a DICOMDIR file within a ZIP archive: \"" << filename << "\""; |
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211 } |
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212 else |
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213 { |
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214 throw; |
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215 } |
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216 } |
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217 } |
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218 } |
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219 |
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220 call.GetOutput().AnswerJson(answer); |
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221 } |
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222 else |
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223 { |
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224 // The lifetime of "dicom" must be longer than "toStore", as the |
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225 // latter can possibly store a reference to the former (*) |
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226 std::string dicom; |
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227 |
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228 std::unique_ptr<DicomInstanceToStore> toStore; |
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229 |
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230 if (boost::iequals(call.GetHttpHeader("content-encoding", ""), "gzip")) |
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231 { |
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232 GzipCompressor compressor; |
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233 compressor.Uncompress(dicom, call.GetBodyData(), call.GetBodySize()); |
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234 toStore.reset(DicomInstanceToStore::CreateFromBuffer(dicom)); // (*) |
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235 } |
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236 else |
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237 { |
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238 toStore.reset(DicomInstanceToStore::CreateFromBuffer(call.GetBodyData(), call.GetBodySize())); |
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239 } |
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240 |
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241 toStore->SetOrigin(DicomInstanceOrigin::FromRest(call)); |
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242 |
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243 std::string publicId; |
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244 ServerContext::StoreResult result = context.Store(publicId, *toStore, StoreInstanceMode_Default); |
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245 |
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246 OrthancRestApi::GetApi(call).AnswerStoredInstance(call, *toStore, result.GetStatus(), publicId); |
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247 } |
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248 } |
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249 |
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250 |
304 | 251 |
213
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252 // Registration of the various REST handlers -------------------------------- |
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253 |
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254 OrthancRestApi::OrthancRestApi(ServerContext& context, |
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255 bool orthancExplorerEnabled) : |
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256 context_(context), |
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257 leaveBarrier_(false), |
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258 resetRequestReceived_(false), |
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259 activeRequests_(context.GetMetricsRegistry(), |
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260 "orthanc_rest_api_active_requests", |
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261 MetricsType_MaxOver10Seconds) |
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262 { |
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263 RegisterSystem(orthancExplorerEnabled); |
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264 |
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265 RegisterChanges(); |
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266 RegisterResources(); |
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267 RegisterModalities(); |
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268 RegisterAnonymizeModify(); |
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269 RegisterArchive(); |
211 | 270 |
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271 Register("/instances", UploadDicomFile); |
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272 |
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273 // Auto-generated directories |
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274 Register("/tools", RestApi::AutoListChildren); |
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275 Register("/tools/reset", ResetOrthanc); |
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276 Register("/tools/shutdown", ShutdownOrthanc); |
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277 } |
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278 |
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279 |
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280 bool OrthancRestApi::Handle(HttpOutput& output, |
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281 RequestOrigin origin, |
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282 const char* remoteIp, |
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283 const char* username, |
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284 HttpMethod method, |
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285 const UriComponents& uri, |
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286 const HttpToolbox::Arguments& headers, |
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287 const HttpToolbox::GetArguments& getArguments, |
3401 | 288 const void* bodyData, |
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289 size_t bodySize) |
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290 { |
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291 MetricsRegistry::Timer timer(context_.GetMetricsRegistry(), "orthanc_rest_api_duration_ms"); |
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292 MetricsRegistry::ActiveCounter counter(activeRequests_); |
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293 |
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294 return RestApi::Handle(output, origin, remoteIp, username, method, |
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295 uri, headers, getArguments, bodyData, bodySize); |
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296 } |
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297 |
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298 |
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299 ServerContext& OrthancRestApi::GetContext(RestApiCall& call) |
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300 { |
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301 return GetApi(call).context_; |
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302 } |
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303 |
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304 |
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305 ServerIndex& OrthancRestApi::GetIndex(RestApiCall& call) |
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306 { |
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307 return GetContext(call).GetIndex(); |
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308 } |
2867 | 309 |
310 | |
311 | |
312 static const char* KEY_PERMISSIVE = "Permissive"; | |
313 static const char* KEY_PRIORITY = "Priority"; | |
314 static const char* KEY_SYNCHRONOUS = "Synchronous"; | |
315 static const char* KEY_ASYNCHRONOUS = "Asynchronous"; | |
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316 |
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317 |
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318 bool OrthancRestApi::IsSynchronousJobRequest(bool isDefaultSynchronous, |
2966 | 319 const Json::Value& body) |
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320 { |
2966 | 321 if (body.type() != Json::objectValue) |
322 { | |
323 return isDefaultSynchronous; | |
324 } | |
325 else if (body.isMember(KEY_SYNCHRONOUS)) | |
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326 { |
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327 return SerializationToolbox::ReadBoolean(body, KEY_SYNCHRONOUS); |
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328 } |
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329 else if (body.isMember(KEY_ASYNCHRONOUS)) |
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330 { |
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331 return !SerializationToolbox::ReadBoolean(body, KEY_ASYNCHRONOUS); |
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332 } |
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333 else |
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334 { |
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335 return isDefaultSynchronous; |
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336 } |
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337 } |
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338 |
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339 |
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340 unsigned int OrthancRestApi::GetJobRequestPriority(const Json::Value& body) |
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341 { |
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342 if (body.type() != Json::objectValue || |
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343 !body.isMember(KEY_PRIORITY)) |
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344 { |
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345 return 0; // Default priority |
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346 } |
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347 else |
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348 { |
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349 return SerializationToolbox::ReadInteger(body, KEY_PRIORITY); |
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350 } |
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351 } |
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352 |
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353 |
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354 void OrthancRestApi::SubmitGenericJob(RestApiOutput& output, |
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355 ServerContext& context, |
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356 IJob* job, |
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357 bool synchronous, |
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358 int priority) |
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359 { |
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360 std::unique_ptr<IJob> raii(job); |
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361 |
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362 if (job == NULL) |
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363 { |
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364 throw OrthancException(ErrorCode_NullPointer); |
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365 } |
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366 |
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367 if (synchronous) |
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368 { |
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369 Json::Value successContent; |
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370 context.GetJobsEngine().GetRegistry().SubmitAndWait |
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371 (successContent, raii.release(), priority); |
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372 |
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373 // Success in synchronous execution |
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374 output.AnswerJson(successContent); |
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375 } |
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376 else |
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377 { |
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378 // Asynchronous mode: Submit the job, but don't wait for its completion |
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379 std::string id; |
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380 context.GetJobsEngine().GetRegistry().Submit |
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381 (id, raii.release(), priority); |
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382 |
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383 Json::Value v; |
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384 v["ID"] = id; |
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385 v["Path"] = "/jobs/" + id; |
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386 output.AnswerJson(v); |
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387 } |
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388 } |
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389 |
2867 | 390 |
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391 void OrthancRestApi::SubmitGenericJob(RestApiPostCall& call, |
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392 IJob* job, |
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393 bool isDefaultSynchronous, |
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394 const Json::Value& body) const |
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395 { |
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396 std::unique_ptr<IJob> raii(job); |
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397 |
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398 if (body.type() != Json::objectValue) |
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399 { |
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400 throw OrthancException(ErrorCode_BadFileFormat); |
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401 } |
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402 |
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403 bool synchronous = IsSynchronousJobRequest(isDefaultSynchronous, body); |
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404 int priority = GetJobRequestPriority(body); |
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405 |
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406 SubmitGenericJob(call.GetOutput(), context_, raii.release(), synchronous, priority); |
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407 } |
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408 |
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409 |
2867 | 410 void OrthancRestApi::SubmitCommandsJob(RestApiPostCall& call, |
411 SetOfCommandsJob* job, | |
412 bool isDefaultSynchronous, | |
413 const Json::Value& body) const | |
414 { | |
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415 std::unique_ptr<SetOfCommandsJob> raii(job); |
2867 | 416 |
417 if (body.type() != Json::objectValue) | |
418 { | |
419 throw OrthancException(ErrorCode_BadFileFormat); | |
420 } | |
421 | |
422 job->SetDescription("REST API"); | |
423 | |
424 if (body.isMember(KEY_PERMISSIVE)) | |
425 { | |
426 job->SetPermissive(SerializationToolbox::ReadBoolean(body, KEY_PERMISSIVE)); | |
427 } | |
428 else | |
429 { | |
430 job->SetPermissive(false); | |
431 } | |
432 | |
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433 SubmitGenericJob(call, raii.release(), isDefaultSynchronous, body); |
2867 | 434 } |
4419 | 435 |
436 | |
437 void OrthancRestApi::DocumentSubmitGenericJob(RestApiPostCall& call) | |
438 { | |
439 call.GetDocumentation() | |
440 .SetRequestField(KEY_SYNCHRONOUS, RestApiCallDocumentation::Type_Boolean, | |
441 "If `true`, run the job in synchronous mode, which means that the HTTP answer will directly " | |
442 "contain the result of the job. This is the default, easy behavior, but it is *not* desirable for " | |
443 "long jobs, as it might lead to network timeouts.", false) | |
444 .SetRequestField(KEY_ASYNCHRONOUS, RestApiCallDocumentation::Type_Boolean, | |
445 "If `true`, run the job in asynchronous mode, which means that the REST API call will immediately " | |
446 "return, reporting the identifier of a job. Prefer this flavor wherever possible.", false) | |
447 .SetRequestField(KEY_PRIORITY, RestApiCallDocumentation::Type_Number, | |
448 "In asynchronous mode, the priority of the job. The lower the value, the higher the priority.", false) | |
449 .SetAnswerField("ID", RestApiCallDocumentation::Type_String, "In asynchronous mode, identifier of the job") | |
450 .SetAnswerField("Path", RestApiCallDocumentation::Type_String, "In asynchronous mode, path to access the job in the REST API"); | |
451 } | |
452 | |
453 | |
454 void OrthancRestApi::DocumentSubmitCommandsJob(RestApiPostCall& call) | |
455 { | |
456 DocumentSubmitGenericJob(call); | |
457 call.GetDocumentation() | |
458 .SetRequestField(KEY_PERMISSIVE, RestApiCallDocumentation::Type_Boolean, | |
459 "If `true`, ignore errors during the individual steps of the job.", false); | |
460 } | |
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461 |
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462 |
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463 static const std::string GET_SIMPLIFY = "simplify"; |
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464 static const std::string GET_FULL = "full"; |
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465 static const std::string GET_SHORT = "short"; |
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466 |
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467 static const std::string POST_SIMPLIFY = "Simplify"; |
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468 static const std::string POST_FULL = "Full"; |
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469 static const std::string POST_SHORT = "Short"; |
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470 |
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471 static const std::string DOCUMENT_SIMPLIFY = |
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472 "report the DICOM tags in human-readable format (using the symbolic name of the tags)"; |
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473 |
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474 static const std::string DOCUMENT_SHORT = |
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475 "report the DICOM tags in hexadecimal format"; |
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476 |
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477 static const std::string DOCUMENT_FULL = |
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478 "report the DICOM tags in full format (tags indexed by their hexadecimal " |
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479 "format, associated with their symbolic name and their value)"; |
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480 |
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481 |
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482 DicomToJsonFormat OrthancRestApi::GetDicomFormat(const RestApiGetCall& call, |
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483 DicomToJsonFormat defaultFormat) |
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484 { |
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485 if (call.HasArgument(GET_SIMPLIFY)) |
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486 { |
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487 return DicomToJsonFormat_Human; |
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488 } |
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489 else if (call.HasArgument(GET_SHORT)) |
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490 { |
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491 return DicomToJsonFormat_Short; |
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492 } |
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493 else if (call.HasArgument(GET_FULL)) |
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494 { |
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495 return DicomToJsonFormat_Full; |
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496 } |
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497 else |
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498 { |
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499 return defaultFormat; |
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500 } |
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501 } |
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502 |
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503 |
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504 DicomToJsonFormat OrthancRestApi::GetDicomFormat(const Json::Value& body, |
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505 DicomToJsonFormat defaultFormat) |
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506 { |
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507 if (body.isMember(POST_SIMPLIFY) && |
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508 SerializationToolbox::ReadBoolean(body, POST_SIMPLIFY)) |
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509 { |
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510 return DicomToJsonFormat_Human; |
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511 } |
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512 else if (body.isMember(POST_SHORT) && |
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513 SerializationToolbox::ReadBoolean(body, POST_SHORT)) |
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514 { |
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515 return DicomToJsonFormat_Short; |
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516 } |
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517 else if (body.isMember(POST_FULL) && |
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518 SerializationToolbox::ReadBoolean(body, POST_FULL)) |
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519 { |
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520 return DicomToJsonFormat_Full; |
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521 } |
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522 else |
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523 { |
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524 return defaultFormat; |
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525 } |
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526 } |
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527 |
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528 |
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529 void OrthancRestApi::DocumentDicomFormat(RestApiGetCall& call, |
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530 DicomToJsonFormat defaultFormat) |
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531 { |
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532 if (defaultFormat != DicomToJsonFormat_Human) |
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533 { |
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534 call.GetDocumentation().SetHttpGetArgument( |
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535 GET_SIMPLIFY, RestApiCallDocumentation::Type_Boolean, "If present, " + DOCUMENT_SIMPLIFY, false); |
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536 } |
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537 |
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538 if (defaultFormat != DicomToJsonFormat_Short) |
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539 { |
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540 call.GetDocumentation().SetHttpGetArgument( |
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541 GET_SHORT, RestApiCallDocumentation::Type_Boolean, "If present, " + DOCUMENT_SHORT, false); |
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542 } |
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543 |
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544 if (defaultFormat != DicomToJsonFormat_Full) |
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545 { |
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546 call.GetDocumentation().SetHttpGetArgument( |
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547 GET_FULL, RestApiCallDocumentation::Type_Boolean, "If present, " + DOCUMENT_FULL, false); |
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548 } |
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549 } |
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550 |
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551 |
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552 void OrthancRestApi::DocumentDicomFormat(RestApiPostCall& call, |
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553 DicomToJsonFormat defaultFormat) |
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554 { |
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555 if (defaultFormat != DicomToJsonFormat_Human) |
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556 { |
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557 call.GetDocumentation().SetRequestField(POST_SIMPLIFY, RestApiCallDocumentation::Type_Boolean, |
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558 "If set to `true`, " + DOCUMENT_SIMPLIFY, false); |
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559 } |
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560 |
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561 if (defaultFormat != DicomToJsonFormat_Short) |
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562 { |
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563 call.GetDocumentation().SetRequestField(POST_SHORT, RestApiCallDocumentation::Type_Boolean, |
4698
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564 "If set to `true`, " + DOCUMENT_SHORT, false); |
4697
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565 } |
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566 |
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567 if (defaultFormat != DicomToJsonFormat_Full) |
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568 { |
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569 call.GetDocumentation().SetRequestField(POST_FULL, RestApiCallDocumentation::Type_Boolean, |
4698
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570 "If set to `true`, " + DOCUMENT_FULL, false); |
4697
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571 } |
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572 } |
210
96b7918a6a18
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573 } |