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annotate OrthancFramework/Sources/FileStorage/StorageAccessor.cpp @ 4731:283d246fafdb

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fix broken "Do lookup" button in Orthanc Explorer
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 27 Jun 2021 12:48:26 +0200
parents cff7fdfc83a4
children 434843934307
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Lesser General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Lesser General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Lesser General Public
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18 * License along with this program. If not, see
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19 * <http://www.gnu.org/licenses/>.
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20 **/
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21
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22
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23 #include "../PrecompiledHeaders.h"
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24 #include "StorageAccessor.h"
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25
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26 #include "../Compatibility.h"
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27 #include "../Compression/ZlibCompressor.h"
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28 #include "../MetricsRegistry.h"
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29 #include "../OrthancException.h"
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30 #include "../Toolbox.h"
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31
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32 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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33 # include "../HttpServer/HttpStreamTranscoder.h"
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34 #endif
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35
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37 static const std::string METRICS_CREATE = "orthanc_storage_create_duration_ms";
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38 static const std::string METRICS_READ = "orthanc_storage_read_duration_ms";
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39 static const std::string METRICS_REMOVE = "orthanc_storage_remove_duration_ms";
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41
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42 namespace Orthanc
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43 {
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44 class StorageAccessor::MetricsTimer : public boost::noncopyable
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45 {
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46 private:
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47 std::unique_ptr<MetricsRegistry::Timer> timer_;
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49 public:
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50 MetricsTimer(StorageAccessor& that,
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51 const std::string& name)
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52 {
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53 if (that.metrics_ != NULL)
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54 {
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55 timer_.reset(new MetricsRegistry::Timer(*that.metrics_, name));
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56 }
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57 }
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58 };
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59
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60
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61 StorageAccessor::StorageAccessor(IStorageArea &area) :
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62 area_(area),
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63 metrics_(NULL)
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64 {
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65 }
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66
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67 StorageAccessor::StorageAccessor(IStorageArea &area, MetricsRegistry &metrics) :
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68 area_(area),
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69 metrics_(&metrics)
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70 {
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71 }
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72
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73
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74 FileInfo StorageAccessor::Write(const void* data,
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75 size_t size,
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76 FileContentType type,
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77 CompressionType compression,
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78 bool storeMd5)
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79 {
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80 std::string uuid = Toolbox::GenerateUuid();
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81
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82 std::string md5;
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83
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84 if (storeMd5)
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85 {
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86 Toolbox::ComputeMD5(md5, data, size);
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87 }
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88
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89 switch (compression)
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90 {
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91 case CompressionType_None:
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92 {
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93 MetricsTimer timer(*this, METRICS_CREATE);
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94
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95 area_.Create(uuid, data, size, type);
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96 return FileInfo(uuid, type, size, md5);
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97 }
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98
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99 case CompressionType_ZlibWithSize:
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100 {
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101 ZlibCompressor zlib;
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102
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103 std::string compressed;
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104 zlib.Compress(compressed, data, size);
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105
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106 std::string compressedMD5;
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107
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108 if (storeMd5)
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109 {
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110 Toolbox::ComputeMD5(compressedMD5, compressed);
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111 }
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112
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113 {
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114 MetricsTimer timer(*this, METRICS_CREATE);
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115
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116 if (compressed.size() > 0)
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117 {
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118 area_.Create(uuid, &compressed[0], compressed.size(), type);
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119 }
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120 else
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121 {
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122 area_.Create(uuid, NULL, 0, type);
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123 }
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124 }
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125
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126 return FileInfo(uuid, type, size, md5,
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127 CompressionType_ZlibWithSize, compressed.size(), compressedMD5);
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128 }
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129
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130 default:
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131 throw OrthancException(ErrorCode_NotImplemented);
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132 }
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133 }
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134
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135 FileInfo StorageAccessor::Write(const std::string &data,
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136 FileContentType type,
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137 CompressionType compression,
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138 bool storeMd5)
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139 {
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140 return Write((data.size() == 0 ? NULL : data.c_str()),
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141 data.size(), type, compression, storeMd5);
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142 }
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143
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144
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145 void StorageAccessor::Read(std::string& content,
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146 const FileInfo& info)
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147 {
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148 switch (info.GetCompressionType())
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149 {
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150 case CompressionType_None:
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151 {
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152 MetricsTimer timer(*this, METRICS_READ);
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153
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154 std::unique_ptr<IMemoryBuffer> buffer(area_.Read(info.GetUuid(), info.GetContentType()));
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155 buffer->MoveToString(content);
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156 break;
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157 }
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158
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159 case CompressionType_ZlibWithSize:
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160 {
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161 ZlibCompressor zlib;
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162
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163 std::unique_ptr<IMemoryBuffer> compressed;
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164
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165 {
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166 MetricsTimer timer(*this, METRICS_READ);
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167 compressed.reset(area_.Read(info.GetUuid(), info.GetContentType()));
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168 }
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169
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170 zlib.Uncompress(content, compressed->GetData(), compressed->GetSize());
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171 break;
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172 }
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173
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174 default:
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175 {
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176 throw OrthancException(ErrorCode_NotImplemented);
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177 }
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178 }
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179
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180 // TODO Check the validity of the uncompressed MD5?
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181 }
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182
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183
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184 void StorageAccessor::ReadRaw(std::string& content,
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185 const FileInfo& info)
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186 {
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187 MetricsTimer timer(*this, METRICS_READ);
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188
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189 std::unique_ptr<IMemoryBuffer> buffer(area_.Read(info.GetUuid(), info.GetContentType()));
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190 buffer->MoveToString(content);
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191 }
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192
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193
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194 void StorageAccessor::Remove(const std::string& fileUuid,
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195 FileContentType type)
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196 {
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197 MetricsTimer timer(*this, METRICS_REMOVE);
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198 area_.Remove(fileUuid, type);
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199 }
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200
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201 void StorageAccessor::Remove(const FileInfo &info)
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202 {
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203 Remove(info.GetUuid(), info.GetContentType());
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204 }
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205
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206 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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207 void StorageAccessor::SetupSender(BufferHttpSender& sender,
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208 const FileInfo& info,
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209 const std::string& mime)
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210 {
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211 {
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212 MetricsTimer timer(*this, METRICS_READ);
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213 std::unique_ptr<IMemoryBuffer> buffer(area_.Read(info.GetUuid(), info.GetContentType()));
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214 buffer->MoveToString(sender.GetBuffer());
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215 }
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216
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217 sender.SetContentType(mime);
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218
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219 const char* extension;
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220 switch (info.GetContentType())
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221 {
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222 case FileContentType_Dicom:
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223 case FileContentType_DicomUntilPixelData:
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224 extension = ".dcm";
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225 break;
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226
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227 case FileContentType_DicomAsJson:
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228 extension = ".json";
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229 break;
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230
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231 default:
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232 // Non-standard content type
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233 extension = "";
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234 }
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235
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236 sender.SetContentFilename(info.GetUuid() + std::string(extension));
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237 }
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238 #endif
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239
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240
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241 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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242 void StorageAccessor::AnswerFile(HttpOutput& output,
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243 const FileInfo& info,
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244 MimeType mime)
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245 {
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246 AnswerFile(output, info, EnumerationToString(mime));
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247 }
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248 #endif
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249
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250
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251 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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252 void StorageAccessor::AnswerFile(HttpOutput& output,
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253 const FileInfo& info,
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254 const std::string& mime)
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255 {
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256 BufferHttpSender sender;
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257 SetupSender(sender, info, mime);
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258
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259 HttpStreamTranscoder transcoder(sender, info.GetCompressionType());
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260 output.Answer(transcoder);
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261 }
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262 #endif
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263
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264
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265 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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266 void StorageAccessor::AnswerFile(RestApiOutput& output,
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267 const FileInfo& info,
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268 MimeType mime)
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269 {
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270 AnswerFile(output, info, EnumerationToString(mime));
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271 }
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272 #endif
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273
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274
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275 #if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1
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276 void StorageAccessor::AnswerFile(RestApiOutput& output,
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277 const FileInfo& info,
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278 const std::string& mime)
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279 {
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280 BufferHttpSender sender;
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281 SetupSender(sender, info, mime);
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282
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283 HttpStreamTranscoder transcoder(sender, info.GetCompressionType());
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284 output.AnswerStream(transcoder);
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285 }
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286 #endif
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287 }