Mercurial > hg > orthanc
annotate OrthancFramework/UnitTestsSources/DicomMapTests.cpp @ 5765:247fc5368693 find-refactoring
un-sharing DatabaseConstraint and ISqlLookupFormatter with orthanc-databases
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 09 Sep 2024 16:14:22 +0200 |
parents | f7adfb22e20e |
children | a8055aebc6cb 3f10350b26da |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU Lesser General Public License |
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11 * as published by the Free Software Foundation, either version 3 of |
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12 * the License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * Lesser General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU Lesser General Public |
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20 * License along with this program. If not, see |
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21 * <http://www.gnu.org/licenses/>. |
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22 **/ |
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23 |
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24 |
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25 #if ORTHANC_UNIT_TESTS_LINK_FRAMEWORK == 1 |
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26 // Must be the first to be sure to use the Orthanc framework shared library |
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27 # include <OrthancFramework.h> |
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28 #endif |
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29 |
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30 #if !defined(DCMTK_VERSION_NUMBER) |
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31 # error DCMTK_VERSION_NUMBER is not defined |
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32 #endif |
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33 |
4062 | 34 #include <gtest/gtest.h> |
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36 #include "../Sources/Compatibility.h" |
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37 #include "../Sources/OrthancException.h" |
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38 #include "../Sources/DicomFormat/DicomMap.h" |
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39 #include "../Sources/DicomFormat/DicomStreamReader.h" |
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40 #include "../Sources/DicomParsing/FromDcmtkBridge.h" |
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41 #include "../Sources/DicomParsing/ToDcmtkBridge.h" |
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42 #include "../Sources/DicomParsing/ParsedDicomFile.h" |
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43 #include "../Sources/DicomParsing/DicomWebJsonVisitor.h" |
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4304 | 45 #include <boost/lexical_cast.hpp> |
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46 #include <boost/tuple/tuple.hpp> |
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48 using namespace Orthanc; | |
49 | |
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50 |
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51 namespace Orthanc |
711 | 52 { |
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53 // The namespace is necessary because of FRIEND_TEST |
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54 // http://code.google.com/p/googletest/wiki/AdvancedGuide#Private_Class_Members |
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55 |
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56 class DicomMapMainTagsTests : public ::testing::Test |
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57 { |
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58 public: |
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59 DicomMapMainTagsTests() |
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60 { |
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61 } |
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62 |
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63 virtual void SetUp() ORTHANC_OVERRIDE |
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64 { |
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65 DicomMap::ResetDefaultMainDicomTags(); |
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66 } |
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68 virtual void TearDown() ORTHANC_OVERRIDE |
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69 { |
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70 DicomMap::ResetDefaultMainDicomTags(); |
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71 } |
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72 }; |
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73 |
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74 TEST_F(DicomMapMainTagsTests, MainTags) |
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75 { |
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76 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID)); |
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77 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Patient)); |
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78 ASSERT_FALSE(DicomMap::IsMainDicomTag(DICOM_TAG_PATIENT_ID, ResourceType_Study)); |
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80 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_STUDY_INSTANCE_UID)); |
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81 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_ACCESSION_NUMBER)); |
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82 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SERIES_INSTANCE_UID)); |
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83 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_SOP_INSTANCE_UID)); |
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84 |
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85 { |
5176 | 86 std::set<DicomTag> s; |
87 DicomMap::GetAllMainDicomTags(s); | |
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88 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID)); |
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89 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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90 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER)); |
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91 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID)); |
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92 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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93 } |
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95 { |
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96 std::set<DicomTag> s; |
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97 DicomMap::GetMainDicomTags(s, ResourceType_Patient); |
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98 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_PATIENT_ID)); |
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99 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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100 } |
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102 { |
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103 std::set<DicomTag> s; |
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104 DicomMap::GetMainDicomTags(s, ResourceType_Study); |
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105 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_STUDY_INSTANCE_UID)); |
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106 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_ACCESSION_NUMBER)); |
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107 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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108 } |
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109 |
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110 { |
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111 std::set<DicomTag> s; |
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112 DicomMap::GetMainDicomTags(s, ResourceType_Series); |
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113 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SERIES_INSTANCE_UID)); |
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114 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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115 } |
711 | 116 |
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117 { |
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118 std::set<DicomTag> s; |
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119 DicomMap::GetMainDicomTags(s, ResourceType_Instance); |
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120 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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121 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_PATIENT_ID)); |
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122 } |
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123 } |
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124 |
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125 TEST_F(DicomMapMainTagsTests, AddMainTags) |
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126 { |
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127 DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance); |
711 | 128 |
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129 { |
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130 std::set<DicomTag> s; |
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131 DicomMap::GetMainDicomTags(s, ResourceType_Instance); |
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132 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_BITS_ALLOCATED)); |
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133 ASSERT_TRUE(s.end() != s.find(DICOM_TAG_SOP_INSTANCE_UID)); |
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134 } |
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135 { |
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136 std::set<DicomTag> s; |
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137 DicomMap::GetMainDicomTags(s, ResourceType_Series); |
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138 ASSERT_TRUE(s.end() == s.find(DICOM_TAG_BITS_ALLOCATED)); |
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139 } |
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140 |
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141 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_BITS_ALLOCATED)); |
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142 ASSERT_TRUE(DicomMap::IsMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance)); |
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143 |
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144 // adding the same tag should throw |
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145 ASSERT_THROW(DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance), OrthancException); |
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146 |
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147 } |
4933 | 148 |
149 TEST_F(DicomMapMainTagsTests, Signatures) | |
150 { | |
151 std::string defaultPatientSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Patient); | |
152 std::string defaultStudySignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Study); | |
153 std::string defaultSeriesSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Series); | |
154 std::string defaultInstanceSignature = DicomMap::GetDefaultMainDicomTagsSignature(ResourceType_Instance); | |
155 | |
156 ASSERT_NE(defaultInstanceSignature, defaultPatientSignature); | |
157 ASSERT_NE(defaultSeriesSignature, defaultStudySignature); | |
158 ASSERT_NE(defaultSeriesSignature, defaultPatientSignature); | |
159 | |
160 std::string patientSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Patient); | |
161 std::string studySignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Study); | |
162 std::string seriesSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Series); | |
163 std::string instanceSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Instance); | |
164 | |
165 // at start, default and current signature should be equal | |
166 ASSERT_EQ(defaultPatientSignature, patientSignature); | |
167 ASSERT_EQ(defaultStudySignature, studySignature); | |
168 ASSERT_EQ(defaultSeriesSignature, seriesSignature); | |
169 ASSERT_EQ(defaultInstanceSignature, instanceSignature); | |
170 | |
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171 DicomMap::AddMainDicomTag(DICOM_TAG_BITS_ALLOCATED, ResourceType_Instance); |
4933 | 172 instanceSignature = DicomMap::GetMainDicomTagsSignature(ResourceType_Instance); |
173 | |
174 ASSERT_NE(defaultInstanceSignature, instanceSignature); | |
175 } | |
176 | |
711 | 177 } |
178 | |
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179 |
711 | 180 TEST(DicomMap, Tags) |
181 { | |
1360 | 182 std::set<DicomTag> s; |
183 | |
711 | 184 DicomMap m; |
1360 | 185 m.GetTags(s); |
1492 | 186 ASSERT_EQ(0u, s.size()); |
1360 | 187 |
711 | 188 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_NAME)); |
189 ASSERT_FALSE(m.HasTag(0x0010, 0x0010)); | |
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190 m.SetValue(0x0010, 0x0010, "PatientName", false); |
711 | 191 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_NAME)); |
192 ASSERT_TRUE(m.HasTag(0x0010, 0x0010)); | |
193 | |
1360 | 194 m.GetTags(s); |
1492 | 195 ASSERT_EQ(1u, s.size()); |
1360 | 196 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin()); |
197 | |
711 | 198 ASSERT_FALSE(m.HasTag(DICOM_TAG_PATIENT_ID)); |
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199 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID", false); |
711 | 200 ASSERT_TRUE(m.HasTag(0x0010, 0x0020)); |
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201 m.SetValue(DICOM_TAG_PATIENT_ID, "PatientID2", false); |
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202 ASSERT_EQ("PatientID2", m.GetValue(0x0010, 0x0020).GetContent()); |
711 | 203 |
1360 | 204 m.GetTags(s); |
1492 | 205 ASSERT_EQ(2u, s.size()); |
1360 | 206 |
711 | 207 m.Remove(DICOM_TAG_PATIENT_ID); |
208 ASSERT_THROW(m.GetValue(0x0010, 0x0020), OrthancException); | |
209 | |
1360 | 210 m.GetTags(s); |
1492 | 211 ASSERT_EQ(1u, s.size()); |
1360 | 212 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, *s.begin()); |
213 | |
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214 std::unique_ptr<DicomMap> mm(m.Clone()); |
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215 ASSERT_EQ("PatientName", mm->GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
711 | 216 |
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217 m.SetValue(DICOM_TAG_PATIENT_ID, "Hello", false); |
711 | 218 ASSERT_THROW(mm->GetValue(DICOM_TAG_PATIENT_ID), OrthancException); |
219 mm->CopyTagIfExists(m, DICOM_TAG_PATIENT_ID); | |
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220 ASSERT_EQ("Hello", mm->GetValue(DICOM_TAG_PATIENT_ID).GetContent()); |
711 | 221 |
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222 DicomValue v; |
711 | 223 ASSERT_TRUE(v.IsNull()); |
224 } | |
225 | |
226 | |
227 TEST(DicomMap, FindTemplates) | |
228 { | |
229 DicomMap m; | |
230 | |
231 DicomMap::SetupFindPatientTemplate(m); | |
232 ASSERT_TRUE(m.HasTag(DICOM_TAG_PATIENT_ID)); | |
233 | |
234 DicomMap::SetupFindStudyTemplate(m); | |
235 ASSERT_TRUE(m.HasTag(DICOM_TAG_STUDY_INSTANCE_UID)); | |
236 ASSERT_TRUE(m.HasTag(DICOM_TAG_ACCESSION_NUMBER)); | |
237 | |
238 DicomMap::SetupFindSeriesTemplate(m); | |
239 ASSERT_TRUE(m.HasTag(DICOM_TAG_SERIES_INSTANCE_UID)); | |
240 | |
241 DicomMap::SetupFindInstanceTemplate(m); | |
242 ASSERT_TRUE(m.HasTag(DICOM_TAG_SOP_INSTANCE_UID)); | |
243 } | |
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244 |
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245 |
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246 |
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247 |
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248 static void TestModule(ResourceType level, |
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249 DicomModule module) |
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250 { |
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251 // REFERENCE: DICOM PS3.3 2015c - Information Object Definitions |
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252 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html |
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253 |
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254 std::set<DicomTag> main; |
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255 DicomMap::GetMainDicomTags(main, level); |
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256 |
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257 std::set<DicomTag> moduleTags; |
1368 | 258 DicomTag::AddTagsForModule(moduleTags, module); |
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259 |
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260 // The main dicom tags are a subset of the module |
1304 | 261 for (std::set<DicomTag>::const_iterator it = main.begin(); it != main.end(); ++it) |
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262 { |
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263 bool ok = moduleTags.find(*it) != moduleTags.end(); |
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264 |
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265 // Exceptions for the Study level |
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266 if (level == ResourceType_Study && |
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267 (*it == DicomTag(0x0008, 0x0080) || /* InstitutionName, from Visit identification module, related to Visit */ |
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268 *it == DicomTag(0x0032, 0x1032) || /* RequestingPhysician, from Imaging Service Request module, related to Study */ |
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269 *it == DicomTag(0x0032, 0x1060))) /* RequestedProcedureDescription, from Requested Procedure module, related to Study */ |
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270 { |
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271 ok = true; |
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272 } |
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273 |
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274 // Exceptions for the Series level |
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275 if (level == ResourceType_Series && |
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276 (*it == DicomTag(0x0008, 0x0070) || /* Manufacturer, from General Equipment Module */ |
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277 *it == DicomTag(0x0008, 0x1010) || /* StationName, from General Equipment Module */ |
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278 *it == DicomTag(0x0018, 0x0024) || /* SequenceName, from MR Image Module (SIMPLIFICATION => Series) */ |
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279 *it == DicomTag(0x0018, 0x1090) || /* CardiacNumberOfImages, from MR Image Module (SIMPLIFICATION => Series) */ |
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280 *it == DicomTag(0x0020, 0x0037) || /* ImageOrientationPatient, from Image Plane Module (SIMPLIFICATION => Series) */ |
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281 *it == DicomTag(0x0020, 0x0105) || /* NumberOfTemporalPositions, from MR Image Module (SIMPLIFICATION => Series) */ |
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282 *it == DicomTag(0x0020, 0x1002) || /* ImagesInAcquisition, from General Image Module (SIMPLIFICATION => Series) */ |
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283 *it == DicomTag(0x0054, 0x0081) || /* NumberOfSlices, from PET Series module */ |
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284 *it == DicomTag(0x0054, 0x0101) || /* NumberOfTimeSlices, from PET Series module */ |
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285 *it == DicomTag(0x0054, 0x1000) || /* SeriesType, from PET Series module */ |
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286 *it == DicomTag(0x0018, 0x1400) || /* AcquisitionDeviceProcessingDescription, from CR/X-Ray/DX/WholeSlideMicro Image (SIMPLIFICATION => Series) */ |
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287 *it == DicomTag(0x0018, 0x0010))) /* ContrastBolusAgent, from Contrast/Bolus module (SIMPLIFICATION => Series) */ |
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288 { |
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289 ok = true; |
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290 } |
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291 |
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292 // Exceptions for the Instance level |
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294 (*it == DicomTag(0x0020, 0x0012) || /* AccessionNumber, from General Image module */ |
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295 *it == DicomTag(0x0054, 0x1330) || /* ImageIndex, from PET Image module */ |
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296 *it == DicomTag(0x0020, 0x0100) || /* TemporalPositionIdentifier, from MR Image module */ |
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297 *it == DicomTag(0x0028, 0x0008) || /* NumberOfFrames, from Multi-frame module attributes, related to Image */ |
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298 *it == DicomTag(0x0020, 0x0032) || /* ImagePositionPatient, from Image Plan module, related to Image */ |
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299 *it == DicomTag(0x0020, 0x0037) || /* ImageOrientationPatient, from Image Plane Module (Orthanc 1.4.2) */ |
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300 *it == DicomTag(0x0020, 0x4000))) /* ImageComments, from General Image module */ |
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301 { |
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302 ok = true; |
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303 } |
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304 |
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305 if (!ok) |
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306 { |
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307 std::cout << it->Format() << ": " << FromDcmtkBridge::GetTagName(*it, "") |
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308 << " not expected at level " << EnumerationToString(level) << std::endl; |
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309 } |
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310 |
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311 EXPECT_TRUE(ok); |
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312 } |
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313 } |
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314 |
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315 |
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316 TEST(DicomMap, Modules) |
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317 { |
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318 TestModule(ResourceType_Patient, DicomModule_Patient); |
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319 TestModule(ResourceType_Study, DicomModule_Study); |
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320 TestModule(ResourceType_Series, DicomModule_Series); // TODO |
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321 TestModule(ResourceType_Instance, DicomModule_Instance); |
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322 } |
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323 |
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324 |
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325 TEST(DicomMap, Parse) |
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326 { |
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327 DicomMap m; |
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328 float f; |
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329 double d; |
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330 int32_t i; |
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331 int64_t j; |
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332 uint32_t k; |
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333 uint64_t l; |
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334 unsigned int ui; |
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335 std::string s; |
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336 |
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337 m.SetValue(DICOM_TAG_PATIENT_NAME, " ", false); // Empty value |
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338 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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339 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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340 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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341 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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342 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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343 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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344 |
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345 m.SetValue(DICOM_TAG_PATIENT_NAME, "0", true); // Binary value |
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346 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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347 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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348 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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349 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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350 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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351 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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352 |
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353 ASSERT_FALSE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
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354 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, true)); |
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355 ASSERT_EQ("0", s); |
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356 |
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357 |
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358 // 2**31-1 |
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359 m.SetValue(DICOM_TAG_PATIENT_NAME, "2147483647", false); |
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360 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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361 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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362 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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363 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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364 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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365 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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366 ASSERT_FLOAT_EQ(2147483647.0f, f); |
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367 ASSERT_DOUBLE_EQ(2147483647.0, d); |
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368 ASSERT_EQ(2147483647, i); |
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369 ASSERT_EQ(2147483647ll, j); |
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370 ASSERT_EQ(2147483647u, k); |
2418 | 371 ASSERT_EQ(2147483647ull, l); |
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372 |
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373 // Test shortcuts |
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374 m.SetValue(DICOM_TAG_PATIENT_NAME, "42", false); |
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375 ASSERT_TRUE(m.ParseFloat(f, DICOM_TAG_PATIENT_NAME)); |
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376 ASSERT_TRUE(m.ParseDouble(d, DICOM_TAG_PATIENT_NAME)); |
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377 ASSERT_TRUE(m.ParseInteger32(i, DICOM_TAG_PATIENT_NAME)); |
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378 ASSERT_TRUE(m.ParseInteger64(j, DICOM_TAG_PATIENT_NAME)); |
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379 ASSERT_TRUE(m.ParseUnsignedInteger32(k, DICOM_TAG_PATIENT_NAME)); |
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380 ASSERT_TRUE(m.ParseUnsignedInteger64(l, DICOM_TAG_PATIENT_NAME)); |
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381 ASSERT_FLOAT_EQ(42.0f, f); |
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382 ASSERT_DOUBLE_EQ(42.0, d); |
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383 ASSERT_EQ(42, i); |
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384 ASSERT_EQ(42ll, j); |
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385 ASSERT_EQ(42u, k); |
2418 | 386 ASSERT_EQ(42ull, l); |
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387 |
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388 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
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389 ASSERT_EQ("42", s); |
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390 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, true)); |
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391 ASSERT_EQ("42", s); |
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392 |
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393 |
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394 // 2**31 |
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395 m.SetValue(DICOM_TAG_PATIENT_NAME, "2147483648", false); |
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396 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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397 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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398 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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399 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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400 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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401 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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402 ASSERT_FLOAT_EQ(2147483648.0f, f); |
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403 ASSERT_DOUBLE_EQ(2147483648.0, d); |
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404 ASSERT_EQ(2147483648ll, j); |
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405 ASSERT_EQ(2147483648u, k); |
2418 | 406 ASSERT_EQ(2147483648ull, l); |
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407 |
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408 // 2**32-1 |
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409 m.SetValue(DICOM_TAG_PATIENT_NAME, "4294967295", false); |
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410 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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411 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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412 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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413 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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414 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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415 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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416 ASSERT_FLOAT_EQ(4294967295.0f, f); |
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417 ASSERT_DOUBLE_EQ(4294967295.0, d); |
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418 ASSERT_EQ(4294967295ll, j); |
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419 ASSERT_EQ(4294967295u, k); |
2418 | 420 ASSERT_EQ(4294967295ull, l); |
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421 |
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422 // 2**32 |
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423 m.SetValue(DICOM_TAG_PATIENT_NAME, "4294967296", false); |
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424 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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425 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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426 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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427 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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428 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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429 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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430 ASSERT_FLOAT_EQ(4294967296.0f, f); |
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431 ASSERT_DOUBLE_EQ(4294967296.0, d); |
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432 ASSERT_EQ(4294967296ll, j); |
2418 | 433 ASSERT_EQ(4294967296ull, l); |
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434 |
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435 m.SetValue(DICOM_TAG_PATIENT_NAME, "-1", false); |
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436 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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437 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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438 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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439 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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440 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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441 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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442 ASSERT_FLOAT_EQ(-1.0f, f); |
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443 ASSERT_DOUBLE_EQ(-1.0, d); |
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444 ASSERT_EQ(-1, i); |
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445 ASSERT_EQ(-1ll, j); |
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446 |
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447 // -2**31 |
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448 m.SetValue(DICOM_TAG_PATIENT_NAME, "-2147483648", false); |
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449 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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450 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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451 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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452 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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453 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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454 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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455 ASSERT_FLOAT_EQ(-2147483648.0f, f); |
2829 | 456 ASSERT_DOUBLE_EQ(-2147483648.0, d); |
457 ASSERT_EQ(static_cast<int32_t>(-2147483648ll), i); | |
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458 ASSERT_EQ(-2147483648ll, j); |
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459 |
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460 // -2**31 - 1 |
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461 m.SetValue(DICOM_TAG_PATIENT_NAME, "-2147483649", false); |
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462 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseFloat(f)); |
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463 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseDouble(d)); |
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464 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger32(i)); |
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465 ASSERT_TRUE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseInteger64(j)); |
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466 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger32(k)); |
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467 ASSERT_FALSE(m.GetValue(DICOM_TAG_PATIENT_NAME).ParseUnsignedInteger64(l)); |
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468 ASSERT_FLOAT_EQ(-2147483649.0f, f); |
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469 ASSERT_DOUBLE_EQ(-2147483649.0, d); |
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470 ASSERT_EQ(-2147483649ll, j); |
3519
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471 |
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472 |
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473 // "800\0" in US COLMUNS tag |
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474 m.SetValue(DICOM_TAG_COLUMNS, "800\0", false); |
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475 ASSERT_TRUE(m.GetValue(DICOM_TAG_COLUMNS).ParseFirstUnsignedInteger(ui)); |
3541 | 476 ASSERT_EQ(800u, ui); |
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477 m.SetValue(DICOM_TAG_COLUMNS, "800", false); |
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478 ASSERT_TRUE(m.GetValue(DICOM_TAG_COLUMNS).ParseFirstUnsignedInteger(ui)); |
3541 | 479 ASSERT_EQ(800u, ui); |
2410
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480 } |
2863
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481 |
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482 |
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483 TEST(DicomMap, Serialize) |
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484 { |
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485 Json::Value s; |
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486 |
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487 { |
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488 DicomMap m; |
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489 m.SetValue(DICOM_TAG_PATIENT_NAME, "Hello", false); |
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490 m.SetValue(DICOM_TAG_STUDY_DESCRIPTION, "Binary", true); |
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491 m.SetNullValue(DICOM_TAG_SERIES_DESCRIPTION); |
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492 m.Serialize(s); |
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493 } |
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494 |
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495 { |
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496 DicomMap m; |
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497 m.Unserialize(s); |
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498 |
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499 const DicomValue* v = m.TestAndGetValue(DICOM_TAG_ACCESSION_NUMBER); |
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500 ASSERT_TRUE(v == NULL); |
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501 |
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502 v = m.TestAndGetValue(DICOM_TAG_PATIENT_NAME); |
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503 ASSERT_TRUE(v != NULL); |
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504 ASSERT_FALSE(v->IsNull()); |
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505 ASSERT_FALSE(v->IsBinary()); |
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506 ASSERT_EQ("Hello", v->GetContent()); |
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507 |
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508 v = m.TestAndGetValue(DICOM_TAG_STUDY_DESCRIPTION); |
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509 ASSERT_TRUE(v != NULL); |
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510 ASSERT_FALSE(v->IsNull()); |
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511 ASSERT_TRUE(v->IsBinary()); |
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512 ASSERT_EQ("Binary", v->GetContent()); |
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513 |
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514 v = m.TestAndGetValue(DICOM_TAG_SERIES_DESCRIPTION); |
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515 ASSERT_TRUE(v != NULL); |
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516 ASSERT_TRUE(v->IsNull()); |
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517 ASSERT_FALSE(v->IsBinary()); |
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518 ASSERT_THROW(v->GetContent(), OrthancException); |
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519 } |
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520 } |
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DicomMap::FromDicomAsJson
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521 |
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DicomMap::FromDicomAsJson
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522 |
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DicomMap::FromDicomAsJson
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523 |
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DicomMap::ExtractMainDicomTags()
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524 TEST(DicomMap, ExtractMainDicomTags) |
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525 { |
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526 DicomMap b; |
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527 b.SetValue(DICOM_TAG_PATIENT_NAME, "E", false); |
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528 ASSERT_TRUE(b.HasOnlyMainDicomTags()); |
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529 |
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530 { |
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531 DicomMap a; |
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532 a.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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533 a.SetValue(DICOM_TAG_STUDY_DESCRIPTION, "B", false); |
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534 a.SetValue(DICOM_TAG_SERIES_DESCRIPTION, "C", false); |
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535 a.SetValue(DICOM_TAG_NUMBER_OF_FRAMES, "D", false); |
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536 a.SetValue(DICOM_TAG_SLICE_THICKNESS, "F", false); |
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537 ASSERT_FALSE(a.HasOnlyMainDicomTags()); |
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538 b.ExtractMainDicomTags(a); |
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539 } |
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540 |
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541 ASSERT_EQ(4u, b.GetSize()); |
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542 ASSERT_EQ("A", b.GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
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543 ASSERT_EQ("B", b.GetValue(DICOM_TAG_STUDY_DESCRIPTION).GetContent()); |
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544 ASSERT_EQ("C", b.GetValue(DICOM_TAG_SERIES_DESCRIPTION).GetContent()); |
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545 ASSERT_EQ("D", b.GetValue(DICOM_TAG_NUMBER_OF_FRAMES).GetContent()); |
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546 ASSERT_FALSE(b.HasTag(DICOM_TAG_SLICE_THICKNESS)); |
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547 ASSERT_TRUE(b.HasOnlyMainDicomTags()); |
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548 |
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549 b.SetValue(DICOM_TAG_PATIENT_NAME, "G", false); |
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550 |
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551 { |
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552 DicomMap a; |
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553 a.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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554 a.SetValue(DICOM_TAG_SLICE_THICKNESS, "F", false); |
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555 ASSERT_FALSE(a.HasOnlyMainDicomTags()); |
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556 b.Merge(a); |
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557 } |
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558 |
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559 ASSERT_EQ(5u, b.GetSize()); |
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560 ASSERT_EQ("G", b.GetValue(DICOM_TAG_PATIENT_NAME).GetContent()); |
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561 ASSERT_EQ("B", b.GetValue(DICOM_TAG_STUDY_DESCRIPTION).GetContent()); |
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562 ASSERT_EQ("C", b.GetValue(DICOM_TAG_SERIES_DESCRIPTION).GetContent()); |
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563 ASSERT_EQ("D", b.GetValue(DICOM_TAG_NUMBER_OF_FRAMES).GetContent()); |
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564 ASSERT_EQ("F", b.GetValue(DICOM_TAG_SLICE_THICKNESS).GetContent()); |
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565 ASSERT_FALSE(b.HasOnlyMainDicomTags()); |
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566 } |
3187
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567 |
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568 |
4940
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569 TEST(DicomMap, ComputedTags) |
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570 { |
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571 { |
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572 std::set<DicomTag> tags; |
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573 |
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574 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
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575 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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576 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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577 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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578 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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579 } |
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580 |
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581 { |
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582 std::set<DicomTag> tags; |
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583 tags.insert(DICOM_TAG_ACCESSION_NUMBER); |
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584 |
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585 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
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586 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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587 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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588 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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589 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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590 } |
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changeset
|
591 |
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|
592 { |
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593 std::set<DicomTag> tags; |
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594 tags.insert(DICOM_TAG_MODALITIES_IN_STUDY); |
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595 tags.insert(DICOM_TAG_RETRIEVE_URL); |
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596 |
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597 ASSERT_TRUE(DicomMap::HasOnlyComputedTags(tags)); |
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598 ASSERT_TRUE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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599 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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600 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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601 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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602 } |
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603 |
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604 { |
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605 std::set<DicomTag> tags; |
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606 tags.insert(DICOM_TAG_ACCESSION_NUMBER); |
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607 tags.insert(DICOM_TAG_MODALITIES_IN_STUDY); |
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608 |
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609 ASSERT_FALSE(DicomMap::HasOnlyComputedTags(tags)); |
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610 ASSERT_TRUE(DicomMap::HasComputedTags(tags, ResourceType_Study)); |
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611 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Patient)); |
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612 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Series)); |
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613 ASSERT_FALSE(DicomMap::HasComputedTags(tags, ResourceType_Instance)); |
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614 } |
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615 |
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616 } |
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617 |
3551
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618 TEST(DicomMap, RemoveBinary) |
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619 { |
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620 DicomMap b; |
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621 b.SetValue(DICOM_TAG_PATIENT_NAME, "A", false); |
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622 b.SetValue(DICOM_TAG_PATIENT_ID, "B", true); |
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623 b.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, DicomValue()); // NULL |
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624 b.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, DicomValue("C", false)); |
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625 b.SetValue(DICOM_TAG_SOP_INSTANCE_UID, DicomValue("D", true)); |
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626 |
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627 b.RemoveBinaryTags(); |
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628 |
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629 std::string s; |
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630 ASSERT_EQ(2u, b.GetSize()); |
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631 ASSERT_TRUE(b.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); ASSERT_EQ("A", s); |
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632 ASSERT_TRUE(b.LookupStringValue(s, DICOM_TAG_SERIES_INSTANCE_UID, false)); ASSERT_EQ("C", s); |
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633 } |
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634 |
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635 |
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636 TEST(DicomMap, FromDicomAsJsonAndSequences) |
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637 { |
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638 DicomMap m; |
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639 std::string jsonFullString = "{" |
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640 "\"0008,1090\" : " |
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641 "{" |
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642 "\"Name\" : \"ManufacturerModelName\"," |
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643 "\"Type\" : \"String\"," |
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644 "\"Value\" : \"MyModel\"" |
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645 "}," |
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646 "\"0008,1111\" : " |
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647 "{" |
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648 "\"Name\" : \"ReferencedPerformedProcedureStepSequence\"," |
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649 "\"Type\" : \"Sequence\"," |
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650 "\"Value\" : " |
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651 "[" |
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652 "{" |
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653 "\"0008,1150\" : " |
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654 "{" |
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655 "\"Name\" : \"ReferencedSOPClassUID\"," |
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656 "\"Type\" : \"String\"," |
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657 "\"Value\" : \"1.2.4\"" |
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658 "}," |
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659 "\"0008,1155\" : " |
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660 "{" |
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661 "\"Name\" : \"ReferencedSOPInstanceUID\"," |
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662 "\"Type\" : \"String\"," |
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663 "\"Value\" : \"1.2.3\"" |
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664 "}" |
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665 "}" |
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666 "]" |
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667 "}}"; |
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668 |
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669 Json::Value parsedJson; |
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670 bool ret = Toolbox::ReadJson(parsedJson, jsonFullString); |
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671 |
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672 m.FromDicomAsJson(parsedJson, false /* append */, true /* parseSequences*/); |
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673 ASSERT_TRUE(ret); |
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674 |
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675 ASSERT_TRUE(m.HasTag(DicomTag(0x0008, 0x1090))); |
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676 ASSERT_EQ("MyModel", m.GetValue(0x0008,0x1090).GetContent()); |
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677 |
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678 ASSERT_TRUE(m.HasTag(DicomTag(0x0008, 0x1111))); |
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679 const Json::Value& jsonSequence = m.GetValue(0x0008, 0x1111).GetSequenceContent(); |
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680 ASSERT_EQ("ReferencedSOPClassUID", jsonSequence[0]["0008,1150"]["Name"].asString()); |
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681 |
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682 {// serialize to human dicomAsJson |
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683 Json::Value dicomAsJson = Json::objectValue; |
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684 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Human); |
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685 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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686 |
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687 ASSERT_TRUE(dicomAsJson.isMember("ManufacturerModelName")); |
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688 ASSERT_TRUE(dicomAsJson.isMember("ReferencedPerformedProcedureStepSequence")); |
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689 ASSERT_TRUE(dicomAsJson["ReferencedPerformedProcedureStepSequence"][0].isMember("ReferencedSOPClassUID")); |
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690 ASSERT_EQ("1.2.4", dicomAsJson["ReferencedPerformedProcedureStepSequence"][0]["ReferencedSOPClassUID"].asString()); |
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691 } |
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692 |
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693 {// serialize to full dicomAsJson |
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694 Json::Value dicomAsJson = Json::objectValue; |
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695 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Full); |
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696 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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697 |
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698 ASSERT_TRUE(dicomAsJson.isMember("0008,1090")); |
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699 ASSERT_TRUE(dicomAsJson.isMember("0008,1111")); |
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700 ASSERT_TRUE(dicomAsJson["0008,1111"]["Value"][0].isMember("0008,1150")); |
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701 ASSERT_EQ("1.2.4", dicomAsJson["0008,1111"]["Value"][0]["0008,1150"]["Value"].asString()); |
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702 ASSERT_EQ("MyModel", dicomAsJson["0008,1090"]["Value"].asString()); |
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703 } |
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704 |
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705 {// serialize to short dicomAsJson |
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706 Json::Value dicomAsJson = Json::objectValue; |
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707 FromDcmtkBridge::ToJson(dicomAsJson, m, DicomToJsonFormat_Short); |
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708 // printf("%s", dicomAsJson.toStyledString().c_str()); |
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709 |
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710 ASSERT_TRUE(dicomAsJson.isMember("0008,1090")); |
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711 ASSERT_TRUE(dicomAsJson.isMember("0008,1111")); |
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712 ASSERT_TRUE(dicomAsJson["0008,1111"][0].isMember("0008,1150")); |
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713 ASSERT_EQ("1.2.4", dicomAsJson["0008,1111"][0]["0008,1150"].asString()); |
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714 ASSERT_EQ("MyModel", dicomAsJson["0008,1090"].asString()); |
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715 } |
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716 |
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717 {// extract sequence |
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718 DicomMap sequencesOnly; |
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719 m.ExtractSequences(sequencesOnly); |
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720 |
5230 | 721 ASSERT_EQ(1u, sequencesOnly.GetSize()); |
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722 ASSERT_TRUE(sequencesOnly.HasTag(0x0008, 0x1111)); |
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723 ASSERT_TRUE(sequencesOnly.GetValue(0x0008, 0x1111).GetSequenceContent()[0].isMember("0008,1150")); |
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724 |
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725 // copy sequence |
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726 DicomMap sequencesCopy; |
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727 sequencesCopy.SetValue(0x0008, 0x1111, sequencesOnly.GetValue(0x0008, 0x1111)); |
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728 |
5230 | 729 ASSERT_EQ(1u, sequencesCopy.GetSize()); |
5044
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730 ASSERT_TRUE(sequencesCopy.HasTag(0x0008, 0x1111)); |
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731 ASSERT_TRUE(sequencesCopy.GetValue(0x0008, 0x1111).GetSequenceContent()[0].isMember("0008,1150")); |
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732 } |
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733 } |
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734 |
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735 TEST(DicomMap, ExtractSummary) |
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736 { |
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737 Json::Value v = Json::objectValue; |
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738 v["PatientName"] = "Hello"; |
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739 v["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; |
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740 |
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741 { |
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742 Json::Value a = Json::arrayValue; |
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743 |
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744 { |
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745 Json::Value item = Json::objectValue; |
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746 item["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; |
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747 item["ReferencedSOPInstanceUID"] = "1.2.840.113619.2.176.2025.1499492.7040.1171286241.719"; |
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748 a.append(item); |
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749 } |
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|
750 |
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751 { |
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752 Json::Value item = Json::objectValue; |
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753 item["ReferencedSOPClassUID"] = "1.2.840.10008.5.1.4.1.1.4"; // ReferencedSOPClassUID |
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754 item["ReferencedSOPInstanceUID"] = "1.2.840.113619.2.176.2025.1499492.7040.1171286241.726"; |
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755 a.append(item); |
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756 } |
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757 |
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758 v["ReferencedImageSequence"] = a; |
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759 } |
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|
760 |
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761 { |
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762 Json::Value a = Json::arrayValue; |
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|
763 |
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764 { |
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765 Json::Value item = Json::objectValue; |
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766 item["StudyInstanceUID"] = "1.2.840.113704.1.111.7016.1342451220.40"; |
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767 |
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768 { |
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769 Json::Value b = Json::arrayValue; |
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|
770 |
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771 { |
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772 Json::Value c = Json::objectValue; |
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773 c["CodeValue"] = "122403"; |
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774 c["0008,103e"] = "WORLD"; // Series description |
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775 b.append(c); |
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776 } |
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777 |
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778 item["PurposeOfReferenceCodeSequence"] = b; |
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779 } |
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780 |
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781 a.append(item); |
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|
782 } |
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|
783 |
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|
784 v["RelatedSeriesSequence"] = a; |
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785 } |
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|
786 |
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787 std::unique_ptr<ParsedDicomFile> dicom(ParsedDicomFile::CreateFromJson(v, DicomFromJsonFlags_None, "")); |
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788 |
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|
789 DicomMap summary; |
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790 std::set<DicomTag> ignoreTagLength; |
5045 | 791 dicom->ExtractDicomSummary(summary, 256, ignoreTagLength); |
5044
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792 |
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793 ASSERT_TRUE(summary.HasTag(0x0008, 0x1140)); |
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794 ASSERT_EQ("1.2.840.10008.5.1.4.1.1.4", summary.GetValue(0x0008, 0x1140).GetSequenceContent()[0]["0008,1150"]["Value"].asString()); |
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795 } |
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|
796 |
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|
797 |
3187
4bbadcd03966
refactoring retrieval of metadata from database
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3060
diff
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|
798 |
3198
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|
799 TEST(DicomWebJson, Multiplicity) |
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800 { |
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|
801 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.2.4.html |
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802 |
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|
803 ParsedDicomFile dicom(false); |
3201
b69fe409cb4d
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804 dicom.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "SB1^SB2^SB3^SB4^SB5"); |
3198
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805 dicom.ReplacePlainString(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "1\\2.3\\4"); |
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806 dicom.ReplacePlainString(DICOM_TAG_IMAGE_POSITION_PATIENT, ""); |
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|
807 |
3581
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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3551
diff
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|
808 DicomWebJsonVisitor visitor; |
3198
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809 dicom.Apply(visitor); |
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|
810 |
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811 { |
3496
109631ed3564
DicomMap::FromDicomWeb()
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|
812 const Json::Value& tag = visitor.GetResult() ["00200037"]; // ImageOrientationPatient |
3198
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813 const Json::Value& value = tag["Value"]; |
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814 |
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815 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
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816 ASSERT_EQ(2u, tag.getMemberNames().size()); |
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817 ASSERT_EQ(3u, value.size()); |
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818 ASSERT_EQ(Json::realValue, value[1].type()); |
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819 ASSERT_FLOAT_EQ(1.0f, value[0].asFloat()); |
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unit testing dicomweb conversion
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820 ASSERT_FLOAT_EQ(2.3f, value[1].asFloat()); |
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unit testing dicomweb conversion
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changeset
|
821 ASSERT_FLOAT_EQ(4.0f, value[2].asFloat()); |
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unit testing dicomweb conversion
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822 } |
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unit testing dicomweb conversion
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|
823 |
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unit testing dicomweb conversion
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824 { |
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DicomMap::FromDicomWeb()
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825 const Json::Value& tag = visitor.GetResult() ["00200032"]; // ImagePositionPatient |
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|
826 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
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unit testing dicomweb conversion
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changeset
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827 ASSERT_EQ(1u, tag.getMemberNames().size()); |
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unit testing dicomweb conversion
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changeset
|
828 } |
3201
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829 |
3203
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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changeset
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830 std::string xml; |
3201
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dicomweb json to xml
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changeset
|
831 visitor.FormatXml(xml); |
3496
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DicomMap::FromDicomWeb()
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diff
changeset
|
832 |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
833 { |
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DicomMap::FromDicomWeb()
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changeset
|
834 DicomMap m; |
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DicomMap::FromDicomWeb()
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|
835 m.FromDicomWeb(visitor.GetResult()); |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
836 ASSERT_EQ(3u, m.GetSize()); |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
837 |
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DicomMap::FromDicomWeb()
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changeset
|
838 std::string s; |
3518
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DicomMap::GetStringValue()
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diff
changeset
|
839 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_PATIENT_NAME, false)); |
3496
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DicomMap::FromDicomWeb()
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840 ASSERT_EQ("SB1^SB2^SB3^SB4^SB5", s); |
3518
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DicomMap::GetStringValue()
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changeset
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841 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_POSITION_PATIENT, false)); |
3496
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DicomMap::FromDicomWeb()
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|
842 ASSERT_TRUE(s.empty()); |
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DicomMap::FromDicomWeb()
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diff
changeset
|
843 |
3518
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DicomMap::GetStringValue()
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diff
changeset
|
844 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_ORIENTATION_PATIENT, false)); |
3496
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DicomMap::FromDicomWeb()
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changeset
|
845 |
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DicomMap::FromDicomWeb()
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changeset
|
846 std::vector<std::string> v; |
3581
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changeset
|
847 Toolbox::TokenizeString(v, s, '\\'); |
3496
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DicomMap::FromDicomWeb()
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diff
changeset
|
848 ASSERT_FLOAT_EQ(1.0f, boost::lexical_cast<float>(v[0])); |
109631ed3564
DicomMap::FromDicomWeb()
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diff
changeset
|
849 ASSERT_FLOAT_EQ(2.3f, boost::lexical_cast<float>(v[1])); |
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DicomMap::FromDicomWeb()
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850 ASSERT_FLOAT_EQ(4.0f, boost::lexical_cast<float>(v[2])); |
109631ed3564
DicomMap::FromDicomWeb()
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|
851 } |
3187
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852 } |
4bbadcd03966
refactoring retrieval of metadata from database
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|
853 |
3198
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|
854 |
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unit testing dicomweb conversion
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changeset
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855 TEST(DicomWebJson, NullValue) |
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unit testing dicomweb conversion
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856 { |
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unit testing dicomweb conversion
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changeset
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857 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.2.5.html |
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unit testing dicomweb conversion
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changeset
|
858 |
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unit testing dicomweb conversion
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changeset
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859 ParsedDicomFile dicom(false); |
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unit testing dicomweb conversion
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changeset
|
860 dicom.ReplacePlainString(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "1.5\\\\\\2.5"); |
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unit testing dicomweb conversion
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changeset
|
861 |
3581
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unit test DicomWebJson.PixelSpacing
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changeset
|
862 DicomWebJsonVisitor visitor; |
3198
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863 dicom.Apply(visitor); |
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unit testing dicomweb conversion
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changeset
|
864 |
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unit testing dicomweb conversion
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changeset
|
865 { |
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unit testing dicomweb conversion
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changeset
|
866 const Json::Value& tag = visitor.GetResult() ["00200037"]; |
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unit testing dicomweb conversion
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diff
changeset
|
867 const Json::Value& value = tag["Value"]; |
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unit testing dicomweb conversion
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changeset
|
868 |
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unit testing dicomweb conversion
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changeset
|
869 ASSERT_EQ(EnumerationToString(ValueRepresentation_DecimalString), tag["vr"].asString()); |
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unit testing dicomweb conversion
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changeset
|
870 ASSERT_EQ(2u, tag.getMemberNames().size()); |
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unit testing dicomweb conversion
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changeset
|
871 ASSERT_EQ(4u, value.size()); |
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changeset
|
872 ASSERT_EQ(Json::realValue, value[0].type()); |
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unit testing dicomweb conversion
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changeset
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873 ASSERT_EQ(Json::nullValue, value[1].type()); |
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unit testing dicomweb conversion
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changeset
|
874 ASSERT_EQ(Json::nullValue, value[2].type()); |
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unit testing dicomweb conversion
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changeset
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875 ASSERT_EQ(Json::realValue, value[3].type()); |
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changeset
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876 ASSERT_FLOAT_EQ(1.5f, value[0].asFloat()); |
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unit testing dicomweb conversion
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changeset
|
877 ASSERT_FLOAT_EQ(2.5f, value[3].asFloat()); |
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unit testing dicomweb conversion
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diff
changeset
|
878 } |
3201
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dicomweb json to xml
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changeset
|
879 |
3203
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URI "/instances/.../file" can return DICOMweb JSON or XML, depending on Accept header
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diff
changeset
|
880 std::string xml; |
3201
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changeset
|
881 visitor.FormatXml(xml); |
3496
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DicomMap::FromDicomWeb()
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changeset
|
882 |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
883 { |
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DicomMap::FromDicomWeb()
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changeset
|
884 DicomMap m; |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
885 m.FromDicomWeb(visitor.GetResult()); |
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DicomMap::FromDicomWeb()
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changeset
|
886 ASSERT_EQ(1u, m.GetSize()); |
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DicomMap::FromDicomWeb()
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diff
changeset
|
887 |
109631ed3564
DicomMap::FromDicomWeb()
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changeset
|
888 std::string s; |
3518
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DicomMap::GetStringValue()
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diff
changeset
|
889 ASSERT_TRUE(m.LookupStringValue(s, DICOM_TAG_IMAGE_ORIENTATION_PATIENT, false)); |
3496
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DicomMap::FromDicomWeb()
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changeset
|
890 |
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DicomMap::FromDicomWeb()
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diff
changeset
|
891 std::vector<std::string> v; |
3581
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changeset
|
892 Toolbox::TokenizeString(v, s, '\\'); |
3496
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DicomMap::FromDicomWeb()
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|
893 ASSERT_FLOAT_EQ(1.5f, boost::lexical_cast<float>(v[0])); |
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DicomMap::FromDicomWeb()
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changeset
|
894 ASSERT_TRUE(v[1].empty()); |
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DicomMap::FromDicomWeb()
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changeset
|
895 ASSERT_TRUE(v[2].empty()); |
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DicomMap::FromDicomWeb()
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diff
changeset
|
896 ASSERT_FLOAT_EQ(2.5f, boost::lexical_cast<float>(v[3])); |
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DicomMap::FromDicomWeb()
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changeset
|
897 } |
3198
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changeset
|
898 } |
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unit testing dicomweb conversion
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changeset
|
899 |
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unit testing dicomweb conversion
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changeset
|
900 |
3581
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unit test DicomWebJson.PixelSpacing
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changeset
|
901 TEST(DicomWebJson, PixelSpacing) |
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unit test DicomWebJson.PixelSpacing
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changeset
|
902 { |
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unit test DicomWebJson.PixelSpacing
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changeset
|
903 // Test related to locales: Make sure that decimal separator is |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
904 // correctly handled (dot "." vs comma ",") |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
905 ParsedDicomFile source(false); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
906 source.ReplacePlainString(DICOM_TAG_PIXEL_SPACING, "1.5\\1.3"); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
907 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
908 DicomWebJsonVisitor visitor; |
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unit test DicomWebJson.PixelSpacing
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changeset
|
909 source.Apply(visitor); |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
910 |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
911 DicomMap target; |
4de1b019ca71
unit test DicomWebJson.PixelSpacing
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diff
changeset
|
912 target.FromDicomWeb(visitor.GetResult()); |
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unit test DicomWebJson.PixelSpacing
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changeset
|
913 |
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unit test DicomWebJson.PixelSpacing
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changeset
|
914 ASSERT_EQ("DS", visitor.GetResult() ["00280030"]["vr"].asString()); |
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unit test DicomWebJson.PixelSpacing
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changeset
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915 ASSERT_FLOAT_EQ(1.5f, visitor.GetResult() ["00280030"]["Value"][0].asFloat()); |
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unit test DicomWebJson.PixelSpacing
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changeset
|
916 ASSERT_FLOAT_EQ(1.3f, visitor.GetResult() ["00280030"]["Value"][1].asFloat()); |
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unit test DicomWebJson.PixelSpacing
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changeset
|
917 |
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unit test DicomWebJson.PixelSpacing
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changeset
|
918 std::string s; |
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unit test DicomWebJson.PixelSpacing
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diff
changeset
|
919 ASSERT_TRUE(target.LookupStringValue(s, DICOM_TAG_PIXEL_SPACING, false)); |
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unit test DicomWebJson.PixelSpacing
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changeset
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920 ASSERT_EQ(s, "1.5\\1.3"); |
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unit test DicomWebJson.PixelSpacing
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921 } |
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DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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changeset
|
922 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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changeset
|
923 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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changeset
|
924 TEST(DicomMap, MainTagNames) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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changeset
|
925 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff
changeset
|
926 ASSERT_EQ(3, ResourceType_Instance - ResourceType_Patient); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
927 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
928 for (int i = ResourceType_Patient; i <= ResourceType_Instance; i++) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
929 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
930 ResourceType level = static_cast<ResourceType>(i); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
931 |
5175
48005e522bd6
start fixing thread safety issues with DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5045
diff
changeset
|
932 std::set<DicomTag> tags; |
48005e522bd6
start fixing thread safety issues with DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5045
diff
changeset
|
933 DicomMap::GetMainDicomTags(tags, level); |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
934 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
935 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
936 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
937 DicomMap a; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
938 a.SetValue(*it, "TEST", false); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
939 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
940 Json::Value json; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
941 a.DumpMainDicomTags(json, level); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
942 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
943 ASSERT_EQ(Json::objectValue, json.type()); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
944 ASSERT_EQ(1u, json.getMemberNames().size()); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
945 |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
946 std::string name = json.getMemberNames() [0]; |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
947 EXPECT_EQ(name, FromDcmtkBridge::GetTagName(*it, "")); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
948 |
4696
dd6274412ff4
new configuration option "ExternalDictionaries" to load external DICOM dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4494
diff
changeset
|
949 std::string main = FromDcmtkBridge::GetTagName(*it, ""); |
3651
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
950 if (!main.empty()) |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
951 { |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
952 ASSERT_EQ(main, name); |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
953 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
954 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
955 } |
46cb00e4adbb
DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
956 } |
4213
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
957 |
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
958 |
be2eca8b02e1
testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4119
diff
changeset
|
959 |
4218
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
960 TEST(DicomTag, Comparisons) |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
961 { |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
962 DicomTag a(0x0000, 0x0000); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
963 DicomTag b(0x0010, 0x0010); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
964 DicomTag c(0x0010, 0x0020); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
965 DicomTag d(0x0020, 0x0000); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
966 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
967 // operator==() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
968 ASSERT_TRUE(a == a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
969 ASSERT_FALSE(a == b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
970 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
971 // operator!=() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
972 ASSERT_FALSE(a != a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
973 ASSERT_TRUE(a != b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
974 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
975 // operator<=() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
976 ASSERT_TRUE(a <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
977 ASSERT_TRUE(a <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
978 ASSERT_TRUE(a <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
979 ASSERT_TRUE(a <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
980 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
981 ASSERT_FALSE(b <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
982 ASSERT_TRUE(b <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
983 ASSERT_TRUE(b <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
984 ASSERT_TRUE(b <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
985 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
986 ASSERT_FALSE(c <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
987 ASSERT_FALSE(c <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
988 ASSERT_TRUE(c <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
989 ASSERT_TRUE(c <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
990 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
991 ASSERT_FALSE(d <= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
992 ASSERT_FALSE(d <= b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
993 ASSERT_FALSE(d <= c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
994 ASSERT_TRUE(d <= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
995 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
996 // operator<() |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
997 ASSERT_FALSE(a < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
998 ASSERT_TRUE(a < b); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
999 ASSERT_TRUE(a < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1000 ASSERT_TRUE(a < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1001 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1002 ASSERT_FALSE(b < a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1003 ASSERT_FALSE(b < b); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1004 ASSERT_TRUE(b < c); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1005 ASSERT_TRUE(b < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1006 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1007 ASSERT_FALSE(c < a); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1008 ASSERT_FALSE(c < b); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1009 ASSERT_FALSE(c < c); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1010 ASSERT_TRUE(c < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1011 |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1012 ASSERT_FALSE(d < a); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1013 ASSERT_FALSE(d < b); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1014 ASSERT_FALSE(d < c); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1015 ASSERT_FALSE(d < d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1016 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1017 // operator>=() |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1018 ASSERT_TRUE(a >= a); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1019 ASSERT_FALSE(a >= b); |
8e069a7e1c11
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parents:
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diff
changeset
|
1020 ASSERT_FALSE(a >= c); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1021 ASSERT_FALSE(a >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1022 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1023 ASSERT_TRUE(b >= a); |
8e069a7e1c11
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4217
diff
changeset
|
1024 ASSERT_TRUE(b >= b); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1025 ASSERT_FALSE(b >= c); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1026 ASSERT_FALSE(b >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1027 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1028 ASSERT_TRUE(c >= a); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1029 ASSERT_TRUE(c >= b); |
8e069a7e1c11
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1030 ASSERT_TRUE(c >= c); |
8e069a7e1c11
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parents:
4217
diff
changeset
|
1031 ASSERT_FALSE(c >= d); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1032 |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1033 ASSERT_TRUE(d >= a); |
8e069a7e1c11
validation against orthanc-tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4217
diff
changeset
|
1034 ASSERT_TRUE(d >= b); |
8e069a7e1c11
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1035 ASSERT_TRUE(d >= c); |
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1036 ASSERT_TRUE(d >= d); |
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1037 |
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1038 // operator>() |
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1039 ASSERT_FALSE(a > a); |
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1040 ASSERT_FALSE(a > b); |
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1041 ASSERT_FALSE(a > c); |
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1042 ASSERT_FALSE(a > d); |
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|
1043 |
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1044 ASSERT_TRUE(b > a); |
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1045 ASSERT_FALSE(b > b); |
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1046 ASSERT_FALSE(b > c); |
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1047 ASSERT_FALSE(b > d); |
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1048 |
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1049 ASSERT_TRUE(c > a); |
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1050 ASSERT_TRUE(c > b); |
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1051 ASSERT_FALSE(c > c); |
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1052 ASSERT_FALSE(c > d); |
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1053 |
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1054 ASSERT_TRUE(d > a); |
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1055 ASSERT_TRUE(d > b); |
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1056 ASSERT_TRUE(d > c); |
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1057 ASSERT_FALSE(d > d); |
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1058 } |
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1059 |
4845
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1060 TEST(ParsedDicomFile, canIncludeXsVrTags) |
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1061 { |
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1062 Json::Value tags; |
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1063 tags["0028,0034"] = "1\\1"; // PixelAspectRatio |
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1064 tags["0028,1101"] = "256\\0\\16"; // RedPaletteColorLookupTableDescriptor which is declared as xs VR in dicom.dic |
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1065 |
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1066 std::unique_ptr<ParsedDicomFile> dicom(ParsedDicomFile::CreateFromJson(tags, DicomFromJsonFlags_DecodeDataUriScheme, "")); |
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1067 // simply make sure it does not throw ! |
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1068 } |
4218
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1069 |
4213
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1070 |
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1071 TEST(DicomMap, SetupFindTemplates) |
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1072 { |
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1073 /** |
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1074 * The templates for C-FIND must be common to all the Orthanc |
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1075 * servers, and must not be altered by the "ExtraMainDicomTags" |
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1076 * configuration option that was introduced in Orthanc 1.11.0. |
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1077 **/ |
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1078 |
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1079 { |
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1080 DicomMap m; |
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1081 m.SetValue(DICOM_TAG_ENCAPSULATED_DOCUMENT, "nope", false); |
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1082 m.SetValue(DICOM_TAG_PATIENT_ID, "patient_id", false); |
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1083 |
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1084 DicomMap::SetupFindPatientTemplate(m); |
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1085 std::set<DicomTag> tags; |
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1086 m.GetTags(tags); |
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1087 |
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1088 // This corresponds to the values of DEFAULT_PATIENT_MAIN_DICOM_TAGS |
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1089 ASSERT_EQ(5u, tags.size()); |
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1090 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_ID, "nope", false)); |
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1091 |
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1092 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_OTHER_PATIENT_IDS, "nope", false)); |
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1093 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_BIRTH_DATE, "nope", false)); |
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1094 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_NAME, "nope", false)); |
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1095 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_SEX, "nope", false)); |
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1096 } |
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1097 |
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1098 { |
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1099 DicomMap m; |
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1100 m.SetValue(DICOM_TAG_ENCAPSULATED_DOCUMENT, "nope", false); |
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1101 m.SetValue(DICOM_TAG_PATIENT_ID, "patient_id", false); |
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1102 |
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1103 DicomMap::SetupFindStudyTemplate(m); |
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1104 std::set<DicomTag> tags; |
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1105 m.GetTags(tags); |
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1106 |
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1107 // This corresponds to the values of DEFAULT_STUDY_MAIN_DICOM_TAGS |
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1108 ASSERT_EQ(8u, tags.size()); |
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1109 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_ID, "nope", false)); |
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1110 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_ACCESSION_NUMBER, "nope", false)); |
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1111 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_INSTANCE_UID, "nope", false)); |
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1112 |
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1113 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_REFERRING_PHYSICIAN_NAME, "nope", false)); |
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1114 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_DATE, "nope", false)); |
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1115 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_DESCRIPTION, "nope", false)); |
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1116 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_ID, "nope", false)); |
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1117 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_TIME, "nope", false)); |
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1118 } |
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1119 |
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1120 { |
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1121 DicomMap m; |
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1122 m.SetValue(DICOM_TAG_ENCAPSULATED_DOCUMENT, "nope", false); |
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1123 m.SetValue(DICOM_TAG_PATIENT_ID, "patient_id", false); |
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1124 |
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1125 DicomMap::SetupFindSeriesTemplate(m); |
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1126 std::set<DicomTag> tags; |
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1127 m.GetTags(tags); |
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1128 |
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1129 // This corresponds to the values of DEFAULT_SERIES_MAIN_DICOM_TAGS |
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1130 ASSERT_EQ(13u, tags.size()); |
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1131 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_ID, "nope", false)); |
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1132 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_ACCESSION_NUMBER, "nope", false)); |
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1133 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_INSTANCE_UID, "nope", false)); |
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1134 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_INSTANCE_UID, "nope", false)); |
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1135 |
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1136 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_BODY_PART_EXAMINED, "nope", false)); |
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1137 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_MODALITY, "nope", false)); |
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1138 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_OPERATOR_NAME, "nope", false)); |
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1139 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PERFORMED_PROCEDURE_STEP_DESCRIPTION, "nope", false)); |
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1140 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PROTOCOL_NAME, "nope", false)); |
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1141 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_DATE, "nope", false)); |
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1142 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_DESCRIPTION, "nope", false)); |
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1143 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_NUMBER, "nope", false)); |
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1144 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_TIME, "nope", false)); |
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1145 } |
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1146 |
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|
1147 { |
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1148 DicomMap m; |
5180
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1149 m.SetValue(DICOM_TAG_ENCAPSULATED_DOCUMENT, "nope", false); |
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1150 m.SetValue(DICOM_TAG_PATIENT_ID, "patient_id", false); |
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1151 |
5179
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1152 DicomMap::SetupFindInstanceTemplate(m); |
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1153 std::set<DicomTag> tags; |
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1154 m.GetTags(tags); |
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1155 |
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1156 // This corresponds to the values of DEFAULT_INSTANCE_MAIN_DICOM_TAGS |
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1157 ASSERT_EQ(15u, tags.size()); |
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1158 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_PATIENT_ID, "nope", false)); |
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1159 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_ACCESSION_NUMBER, "nope", false)); |
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1160 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_STUDY_INSTANCE_UID, "nope", false)); |
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1161 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SERIES_INSTANCE_UID, "nope", false)); |
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1162 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_SOP_INSTANCE_UID, "nope", false)); |
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1163 |
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1164 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_ACQUISITION_NUMBER, "nope", false)); |
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1165 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_IMAGE_COMMENTS, "nope", false)); |
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1166 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_IMAGE_INDEX, "nope", false)); |
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1167 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "nope", false)); |
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1168 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_IMAGE_POSITION_PATIENT, "nope", false)); |
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1169 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_INSTANCE_CREATION_DATE, "nope", false)); |
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1170 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_INSTANCE_CREATION_TIME, "nope", false)); |
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1171 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_INSTANCE_NUMBER, "nope", false)); |
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1172 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_NUMBER_OF_FRAMES, "nope", false)); |
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1173 ASSERT_EQ("", m.GetStringValue(DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER, "nope", false)); |
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1174 } |
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1175 } |
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1176 |
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1177 |
4325
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1178 #if ORTHANC_SANDBOXED != 1 |
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1179 |
4213
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1180 #include "../Sources/SystemToolbox.h" |
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1181 |
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1182 TEST(DicomMap, DISABLED_ParseDicomMetaInformation) |
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1183 { |
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1184 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
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1185 |
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1186 std::map<std::string, DicomTransferSyntax> f; |
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1187 f.insert(std::make_pair(PATH + "../ColorTestMalaterre.dcm", DicomTransferSyntax_LittleEndianImplicit)); // 1.2.840.10008.1.2 |
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1188 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.1.dcm", DicomTransferSyntax_LittleEndianExplicit)); |
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1189 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.2.dcm", DicomTransferSyntax_BigEndianExplicit)); |
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1190 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.50.dcm", DicomTransferSyntax_JPEGProcess1)); |
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1191 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.51.dcm", DicomTransferSyntax_JPEGProcess2_4)); |
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1192 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.57.dcm", DicomTransferSyntax_JPEGProcess14)); |
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1193 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.70.dcm", DicomTransferSyntax_JPEGProcess14SV1)); |
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1194 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.80.dcm", DicomTransferSyntax_JPEGLSLossless)); |
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1195 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.81.dcm", DicomTransferSyntax_JPEGLSLossy)); |
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1196 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.90.dcm", DicomTransferSyntax_JPEG2000LosslessOnly)); |
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1197 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.4.91.dcm", DicomTransferSyntax_JPEG2000)); |
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1198 f.insert(std::make_pair(PATH + "1.2.840.10008.1.2.5.dcm", DicomTransferSyntax_RLELossless)); |
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1199 |
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1200 for (std::map<std::string, DicomTransferSyntax>::const_iterator it = f.begin(); it != f.end(); ++it) |
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1201 { |
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1202 printf("\n== %s ==\n\n", it->first.c_str()); |
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1203 |
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1204 std::string dicom; |
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1205 SystemToolbox::ReadFile(dicom, it->first, false); |
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1206 |
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1207 DicomMap d; |
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1208 ASSERT_TRUE(DicomMap::ParseDicomMetaInformation(d, dicom.c_str(), dicom.size())); |
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1209 d.Print(stdout); |
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1210 |
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1211 std::string s; |
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1212 ASSERT_TRUE(d.LookupStringValue(s, DICOM_TAG_TRANSFER_SYNTAX_UID, false)); |
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1213 |
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1214 DicomTransferSyntax ts; |
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1215 ASSERT_TRUE(LookupTransferSyntax(ts, s)); |
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1216 ASSERT_EQ(ts, it->second); |
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1217 } |
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1218 } |
4214
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1219 |
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1220 |
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1221 namespace |
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1222 { |
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1223 class V : public DicomStreamReader::IVisitor |
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1224 { |
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1225 private: |
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1226 DicomMap map_; |
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1227 uint64_t pixelDataOffset_; |
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1228 |
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1229 public: |
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1230 V() : |
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1231 pixelDataOffset_(0) |
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1232 { |
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1233 } |
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1234 |
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1235 const DicomMap& GetDicomMap() const |
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1236 { |
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1237 return map_; |
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1238 } |
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1239 |
4214
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1240 virtual void VisitMetaHeaderTag(const DicomTag& tag, |
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1241 const ValueRepresentation& vr, |
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1242 const std::string& value) ORTHANC_OVERRIDE |
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1243 { |
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1244 std::cout << "Header: " << tag.Format() << " [" << Toolbox::ConvertToAscii(value).c_str() << "] (" << value.size() << ")" << std::endl; |
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1245 } |
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1246 |
4220
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1247 virtual void VisitTransferSyntax(DicomTransferSyntax transferSyntax) ORTHANC_OVERRIDE |
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1248 { |
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1249 printf("TRANSFER SYNTAX: %s\n", GetTransferSyntaxUid(transferSyntax)); |
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1250 } |
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1251 |
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1252 virtual bool VisitDatasetTag(const DicomTag& tag, |
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1253 const ValueRepresentation& vr, |
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1254 const std::string& value, |
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1255 bool isLittleEndian, |
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1256 uint64_t fileOffset) ORTHANC_OVERRIDE |
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1257 { |
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1258 if (!isLittleEndian) |
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1259 printf("** "); |
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1260 |
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1261 if (tag == DICOM_TAG_PIXEL_DATA) |
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1262 { |
4216 | 1263 std::cout << "Dataset: " << tag.Format() << " " << EnumerationToString(vr) |
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1264 << " [PIXEL] (" << value.size() << "), offset: " << std::hex << fileOffset << std::dec << std::endl; |
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1265 pixelDataOffset_ = fileOffset; |
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1266 return false; |
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1267 } |
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|
1268 else |
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1269 { |
4216 | 1270 std::cout << "Dataset: " << tag.Format() << " " << EnumerationToString(vr) |
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1271 << " [" << Toolbox::ConvertToAscii(value).c_str() << "] (" << value.size() |
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1272 << "), offset: " << std::hex << fileOffset << std::dec << std::endl; |
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|
1273 } |
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|
1274 |
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1275 map_.SetValue(tag, value, Toolbox::IsAsciiString(value)); |
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|
1276 |
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1277 return true; |
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1278 } |
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1279 |
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|
1280 uint64_t GetPixelDataOffset() const |
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1281 { |
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1282 return pixelDataOffset_; |
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1283 } |
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1284 }; |
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1285 } |
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|
1286 |
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|
1287 |
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|
1288 |
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1289 TEST(DicomStreamReader, DISABLED_Tutu) |
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1290 { |
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1291 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
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|
1292 |
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1293 typedef boost::tuple<std::string, uint64_t, ValueRepresentation> Source; |
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1294 typedef std::list<Source> Sources; |
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1295 |
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1296 // $ ~/Subversion/orthanc-tests/Tests/GetPixelDataVR.py ~/Subversion/orthanc-tests/Database/ColorTestMalaterre.dcm ~/Subversion/orthanc-tests/Database/ColorTestImageJ.dcm ~/Subversion/orthanc-tests/Database/Knee/T1/IM-0001-0001.dcm ~/Subversion/orthanc-tests/Database/TransferSyntaxes/*.dcm |
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1297 |
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|
1298 Sources sources; |
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1299 sources.push_back(Source(PATH + "../ColorTestMalaterre.dcm", 0x03a0u, ValueRepresentation_Unknown)); // This file has strange VR |
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1300 sources.push_back(Source(PATH + "../ColorTestImageJ.dcm", 0x00924, ValueRepresentation_OtherByte)); |
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1301 sources.push_back(Source(PATH + "../Knee/T1/IM-0001-0001.dcm", 0x00c78, ValueRepresentation_OtherWord)); |
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1302 sources.push_back(Source(PATH + "1.2.840.10008.1.2.1.dcm", 0x037cu, ValueRepresentation_OtherByte)); |
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1303 sources.push_back(Source(PATH + "1.2.840.10008.1.2.2.dcm", 0x03e8u, ValueRepresentation_OtherByte)); // Big Endian |
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1304 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.50.dcm", 0x04acu, ValueRepresentation_OtherByte)); |
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1305 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.51.dcm", 0x072cu, ValueRepresentation_OtherByte)); |
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1306 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.57.dcm", 0x0620u, ValueRepresentation_OtherByte)); |
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1307 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.70.dcm", 0x065au, ValueRepresentation_OtherByte)); |
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1308 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.80.dcm", 0x0b46u, ValueRepresentation_OtherByte)); |
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1309 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.81.dcm", 0x073eu, ValueRepresentation_OtherByte)); |
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1310 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.90.dcm", 0x0b66u, ValueRepresentation_OtherByte)); |
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1311 sources.push_back(Source(PATH + "1.2.840.10008.1.2.4.91.dcm", 0x19b8u, ValueRepresentation_OtherByte)); |
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1312 sources.push_back(Source(PATH + "1.2.840.10008.1.2.5.dcm", 0x0b0au, ValueRepresentation_OtherByte)); |
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1313 |
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1314 { |
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1315 std::string dicom; |
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1316 |
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1317 uint64_t offset; |
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1318 ValueRepresentation vr; |
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1319 |
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1320 // Not a DICOM image |
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1321 SystemToolbox::ReadFile(dicom, PATH + "1.2.840.10008.1.2.4.50.png", false); |
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1322 ASSERT_FALSE(DicomStreamReader::LookupPixelDataOffset(offset, vr, dicom)); |
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1323 |
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1324 // Image without valid DICOM preamble |
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1325 SystemToolbox::ReadFile(dicom, PATH + "1.2.840.10008.1.2.dcm", false); |
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1326 ASSERT_FALSE(DicomStreamReader::LookupPixelDataOffset(offset, vr, dicom)); |
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1327 } |
4216 | 1328 |
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1329 for (Sources::const_iterator it = sources.begin(); it != sources.end(); ++it) |
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1330 { |
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1331 std::string dicom; |
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1332 SystemToolbox::ReadFile(dicom, it->get<0>(), false); |
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1333 |
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1334 { |
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1335 uint64_t offset; |
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1336 ValueRepresentation vr; |
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1337 ASSERT_TRUE(DicomStreamReader::LookupPixelDataOffset(offset, vr, dicom)); |
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1338 ASSERT_EQ(it->get<1>(), offset); |
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1339 ASSERT_EQ(it->get<2>(), vr); |
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1340 } |
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1341 |
4494
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1342 { |
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|
1343 uint64_t offset; |
5316
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1344 ValueRepresentation vr; |
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1345 ASSERT_TRUE(DicomStreamReader::LookupPixelDataOffset(offset, vr, dicom.c_str(), dicom.size())); |
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1346 ASSERT_EQ(it->get<1>(), offset); |
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|
1347 ASSERT_EQ(it->get<2>(), vr); |
4494
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1348 } |
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|
1349 |
4493
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|
1350 ParsedDicomFile a(dicom); |
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|
1351 Json::Value aa; |
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|
1352 a.DatasetToJson(aa, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0); |
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|
1353 |
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|
1354 std::stringstream stream; |
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DicomStreamReader::LookupPixelDataOffset()
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|
1355 size_t pos = 0; |
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1356 |
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1357 DicomStreamReader r(stream); |
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1358 V visitor; |
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|
1359 |
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|
1360 // Test reading byte per byte |
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1361 while (pos < dicom.size() && |
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|
1362 !r.IsDone()) |
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|
1363 { |
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|
1364 r.Consume(visitor); |
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1365 stream.clear(); |
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|
1366 stream.put(dicom[pos++]); |
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|
1367 } |
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|
1368 |
4214
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|
1369 r.Consume(visitor); |
4493
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|
1370 |
5316
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1371 ASSERT_EQ(it->get<1>(), visitor.GetPixelDataOffset()); |
4493
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|
1372 |
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|
1373 // Truncate the original DICOM up to pixel data |
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|
1374 dicom.resize(visitor.GetPixelDataOffset()); |
4214
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|
1375 |
4493
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|
1376 ParsedDicomFile b(dicom); |
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|
1377 Json::Value bb; |
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|
1378 b.DatasetToJson(bb, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0); |
4214
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|
1379 |
4493
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|
1380 aa.removeMember("7fe0,0010"); |
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|
1381 aa.removeMember("fffc,fffc"); // For "1.2.840.10008.1.2.5.dcm" |
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|
1382 ASSERT_EQ(aa.toStyledString(), bb.toStyledString()); |
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|
1383 } |
4214
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|
1384 } |
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|
1385 |
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|
1386 TEST(DicomStreamReader, DISABLED_Tutu2) |
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|
1387 { |
4223 | 1388 //static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/TransferSyntaxes/"; |
4214
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|
1389 |
4218
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|
1390 //const std::string path = PATH + "1.2.840.10008.1.2.4.50.dcm"; |
4217 | 1391 //const std::string path = PATH + "1.2.840.10008.1.2.2.dcm"; |
4218
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1392 const std::string path = "/home/jodogne/Subversion/orthanc-tests/Database/HierarchicalAnonymization/RTH/RT.dcm"; |
4217 | 1393 |
1394 std::ifstream stream(path.c_str()); | |
4214
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|
1395 |
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|
1396 DicomStreamReader r(stream); |
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|
1397 V visitor; |
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|
1398 |
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|
1399 r.Consume(visitor); |
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|
1400 |
4223 | 1401 printf(">> %d\n", static_cast<int>(r.GetProcessedBytes())); |
4214
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|
1402 } |
4218
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|
1403 |
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1404 |
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|
1405 #include <boost/filesystem.hpp> |
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|
1406 |
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|
1407 TEST(DicomStreamReader, DISABLED_Tutu3) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1408 { |
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|
1409 static const std::string PATH = "/home/jodogne/Subversion/orthanc-tests/Database/"; |
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|
1410 |
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|
1411 std::set<std::string> errors; |
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|
1412 unsigned int success = 0; |
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1413 |
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|
1414 for (boost::filesystem::recursive_directory_iterator current(PATH), end; |
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|
1415 current != end ; ++current) |
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diff
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|
1416 { |
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|
1417 if (SystemToolbox::IsRegularFile(current->path().string())) |
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|
1418 { |
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|
1419 try |
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|
1420 { |
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|
1421 if (current->path().extension() == ".dcm") |
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|
1422 { |
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|
1423 const std::string path = current->path().string(); |
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|
1424 printf("[%s]\n", path.c_str()); |
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|
1425 |
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|
1426 DicomMap m1; |
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|
1427 |
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1428 { |
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|
1429 std::ifstream stream(path.c_str()); |
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1430 |
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|
1431 DicomStreamReader r(stream); |
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|
1432 V visitor; |
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|
1433 |
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1434 try |
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|
1435 { |
4220
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1436 r.Consume(visitor, DICOM_TAG_PIXEL_DATA); |
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|
1437 //r.Consume(visitor); |
4218
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|
1438 success++; |
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1439 } |
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|
1440 catch (OrthancException& e) |
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1441 { |
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|
1442 errors.insert(path); |
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1443 continue; |
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1444 } |
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1445 |
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changeset
|
1446 m1.Assign(visitor.GetDicomMap()); |
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1447 } |
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|
1448 |
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|
1449 m1.SetValue(DICOM_TAG_PIXEL_DATA, "", true); |
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1450 |
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changeset
|
1451 |
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changeset
|
1452 DicomMap m2; |
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1453 |
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|
1454 { |
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1455 std::string dicom; |
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1456 SystemToolbox::ReadFile(dicom, path); |
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1457 |
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1458 ParsedDicomFile f(dicom); |
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1459 f.ExtractDicomSummary(m2, 256); |
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1460 } |
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1461 |
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1462 std::set<DicomTag> tags; |
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1463 m2.GetTags(tags); |
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1464 |
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1465 bool first = true; |
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1466 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it) |
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1467 { |
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1468 if (!m1.HasTag(*it)) |
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1469 { |
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1470 if (first) |
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1471 { |
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1472 fprintf(stderr, "[%s]\n", path.c_str()); |
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1473 first = false; |
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1474 } |
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1475 |
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1476 std::cerr << "ERROR: " << it->Format() << std::endl; |
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1477 } |
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1478 else if (!m2.GetValue(*it).IsNull() && |
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1479 !m2.GetValue(*it).IsBinary() && |
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1480 Toolbox::IsAsciiString(m1.GetValue(*it).GetContent())) |
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1481 { |
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1482 const std::string& v1 = m1.GetValue(*it).GetContent(); |
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1483 const std::string& v2 = m2.GetValue(*it).GetContent(); |
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1484 |
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1485 if (v1 != v2 && |
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1486 (v1.size() != v2.size() + 1 || |
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1487 v1.substr(0, v2.size()) != v2)) |
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1488 { |
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1489 std::cerr << "ERROR: [" << v1 << "] [" << v2 << "]" << std::endl; |
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1490 } |
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1491 } |
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1492 } |
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1493 } |
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1494 } |
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1495 catch (boost::filesystem::filesystem_error&) |
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1496 { |
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1497 } |
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1498 } |
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1499 } |
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1500 |
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1501 |
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1502 printf("\n== ERRORS ==\n"); |
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1503 for (std::set<std::string>::const_iterator |
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1504 it = errors.begin(); it != errors.end(); ++it) |
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1505 { |
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1506 printf("[%s]\n", it->c_str()); |
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1507 } |
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1508 |
4223 | 1509 printf("\n== SUCCESSES: %u ==\n\n", success); |
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1510 } |
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1511 |
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1512 #endif |