Mercurial > hg > orthanc
annotate Core/DicomParsing/DicomWebJsonVisitor.cpp @ 4013:1e9f6d706237
cleanup
| author | Alain Mazy <alain@mazy.be> |
|---|---|
| date | Mon, 08 Jun 2020 16:10:09 +0200 |
| parents | 94f4a18a79cc |
| children |
| rev | line source |
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| 3202 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 3202 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU General Public License as | |
| 9 * published by the Free Software Foundation, either version 3 of the | |
| 10 * License, or (at your option) any later version. | |
| 11 * | |
| 12 * In addition, as a special exception, the copyright holders of this | |
| 13 * program give permission to link the code of its release with the | |
| 14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
| 15 * that use the same license as the "OpenSSL" library), and distribute | |
| 16 * the linked executables. You must obey the GNU General Public License | |
| 17 * in all respects for all of the code used other than "OpenSSL". If you | |
| 18 * modify file(s) with this exception, you may extend this exception to | |
| 19 * your version of the file(s), but you are not obligated to do so. If | |
| 20 * you do not wish to do so, delete this exception statement from your | |
| 21 * version. If you delete this exception statement from all source files | |
| 22 * in the program, then also delete it here. | |
| 23 * | |
| 24 * This program is distributed in the hope that it will be useful, but | |
| 25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 27 * General Public License for more details. | |
| 28 * | |
| 29 * You should have received a copy of the GNU General Public License | |
| 30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 31 **/ | |
| 32 | |
| 33 | |
| 34 #include "../PrecompiledHeaders.h" | |
| 35 #include "DicomWebJsonVisitor.h" | |
| 36 | |
| 37 #include "../OrthancException.h" | |
| 38 #include "../Toolbox.h" | |
| 39 #include "FromDcmtkBridge.h" | |
| 40 | |
| 41 #include <boost/math/special_functions/round.hpp> | |
| 42 #include <boost/lexical_cast.hpp> | |
| 43 | |
| 44 | |
| 45 static const char* const KEY_ALPHABETIC = "Alphabetic"; | |
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46 static const char* const KEY_IDEOGRAPHIC = "Ideographic"; |
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47 static const char* const KEY_PHONETIC = "Phonetic"; |
| 3202 | 48 static const char* const KEY_BULK_DATA_URI = "BulkDataURI"; |
| 49 static const char* const KEY_INLINE_BINARY = "InlineBinary"; | |
| 50 static const char* const KEY_SQ = "SQ"; | |
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51 static const char* const KEY_TAG = "tag"; |
| 3202 | 52 static const char* const KEY_VALUE = "Value"; |
| 53 static const char* const KEY_VR = "vr"; | |
| 54 | |
| 55 | |
| 56 namespace Orthanc | |
| 57 { | |
| 58 #if ORTHANC_ENABLE_PUGIXML == 1 | |
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59 static void DecomposeXmlPersonName(pugi::xml_node& target, |
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60 const std::string& source) |
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61 { |
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62 std::vector<std::string> tokens; |
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63 Toolbox::TokenizeString(tokens, source, '^'); |
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64 |
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65 if (tokens.size() >= 1) |
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66 { |
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67 target.append_child("FamilyName").text() = tokens[0].c_str(); |
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68 } |
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69 |
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70 if (tokens.size() >= 2) |
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71 { |
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72 target.append_child("GivenName").text() = tokens[1].c_str(); |
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73 } |
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74 |
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75 if (tokens.size() >= 3) |
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76 { |
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77 target.append_child("MiddleName").text() = tokens[2].c_str(); |
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78 } |
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79 |
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80 if (tokens.size() >= 4) |
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81 { |
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82 target.append_child("NamePrefix").text() = tokens[3].c_str(); |
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83 } |
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84 |
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85 if (tokens.size() >= 5) |
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86 { |
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87 target.append_child("NameSuffix").text() = tokens[4].c_str(); |
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88 } |
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89 } |
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90 |
| 3202 | 91 static void ExploreXmlDataset(pugi::xml_node& target, |
| 92 const Json::Value& source) | |
| 93 { | |
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94 // http://dicom.nema.org/medical/dicom/current/output/chtml/part18/sect_F.3.html#table_F.3.1-1 |
| 3202 | 95 assert(source.type() == Json::objectValue); |
| 96 | |
| 97 Json::Value::Members members = source.getMemberNames(); | |
| 98 for (size_t i = 0; i < members.size(); i++) | |
| 99 { | |
| 100 const DicomTag tag = FromDcmtkBridge::ParseTag(members[i]); | |
| 101 const Json::Value& content = source[members[i]]; | |
| 102 | |
| 103 assert(content.type() == Json::objectValue && | |
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104 content.isMember(KEY_VR) && |
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105 content[KEY_VR].type() == Json::stringValue); |
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106 const std::string vr = content[KEY_VR].asString(); |
| 3202 | 107 |
| 108 const std::string keyword = FromDcmtkBridge::GetTagName(tag, ""); | |
| 109 | |
| 110 pugi::xml_node node = target.append_child("DicomAttribute"); | |
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111 node.append_attribute(KEY_TAG).set_value(members[i].c_str()); |
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112 node.append_attribute(KEY_VR).set_value(vr.c_str()); |
| 3202 | 113 |
| 114 if (keyword != std::string(DcmTag_ERROR_TagName)) | |
| 115 { | |
| 116 node.append_attribute("keyword").set_value(keyword.c_str()); | |
| 117 } | |
| 118 | |
| 119 if (content.isMember(KEY_VALUE)) | |
| 120 { | |
| 121 assert(content[KEY_VALUE].type() == Json::arrayValue); | |
| 122 | |
| 123 for (Json::Value::ArrayIndex j = 0; j < content[KEY_VALUE].size(); j++) | |
| 124 { | |
| 125 std::string number = boost::lexical_cast<std::string>(j + 1); | |
| 126 | |
| 127 if (vr == "SQ") | |
| 128 { | |
| 129 if (content[KEY_VALUE][j].type() == Json::objectValue) | |
| 130 { | |
| 131 pugi::xml_node child = node.append_child("Item"); | |
| 132 child.append_attribute("number").set_value(number.c_str()); | |
| 133 ExploreXmlDataset(child, content[KEY_VALUE][j]); | |
| 134 } | |
| 135 } | |
| 136 if (vr == "PN") | |
| 137 { | |
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138 bool hasAlphabetic = (content[KEY_VALUE][j].isMember(KEY_ALPHABETIC) && |
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139 content[KEY_VALUE][j][KEY_ALPHABETIC].type() == Json::stringValue); |
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140 |
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141 bool hasIdeographic = (content[KEY_VALUE][j].isMember(KEY_IDEOGRAPHIC) && |
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142 content[KEY_VALUE][j][KEY_IDEOGRAPHIC].type() == Json::stringValue); |
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143 |
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144 bool hasPhonetic = (content[KEY_VALUE][j].isMember(KEY_PHONETIC) && |
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145 content[KEY_VALUE][j][KEY_PHONETIC].type() == Json::stringValue); |
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146 |
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147 if (hasAlphabetic || |
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148 hasIdeographic || |
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149 hasPhonetic) |
| 3202 | 150 { |
| 151 pugi::xml_node child = node.append_child("PersonName"); | |
| 152 child.append_attribute("number").set_value(number.c_str()); | |
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153 |
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154 if (hasAlphabetic) |
| 3202 | 155 { |
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156 pugi::xml_node name = child.append_child(KEY_ALPHABETIC); |
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157 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_ALPHABETIC].asString()); |
| 3202 | 158 } |
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159 |
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160 if (hasIdeographic) |
| 3202 | 161 { |
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162 pugi::xml_node name = child.append_child(KEY_IDEOGRAPHIC); |
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163 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_IDEOGRAPHIC].asString()); |
| 3202 | 164 } |
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165 |
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166 if (hasPhonetic) |
| 3202 | 167 { |
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168 pugi::xml_node name = child.append_child(KEY_PHONETIC); |
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169 DecomposeXmlPersonName(name, content[KEY_VALUE][j][KEY_PHONETIC].asString()); |
| 3202 | 170 } |
| 171 } | |
| 172 } | |
| 173 else | |
| 174 { | |
| 175 pugi::xml_node child = node.append_child("Value"); | |
| 176 child.append_attribute("number").set_value(number.c_str()); | |
| 177 | |
| 178 switch (content[KEY_VALUE][j].type()) | |
| 179 { | |
| 180 case Json::stringValue: | |
| 181 child.text() = content[KEY_VALUE][j].asCString(); | |
| 182 break; | |
| 183 | |
| 184 case Json::realValue: | |
| 185 child.text() = content[KEY_VALUE][j].asFloat(); | |
| 186 break; | |
| 187 | |
| 188 case Json::intValue: | |
| 189 child.text() = content[KEY_VALUE][j].asInt(); | |
| 190 break; | |
| 191 | |
| 192 case Json::uintValue: | |
| 193 child.text() = content[KEY_VALUE][j].asUInt(); | |
| 194 break; | |
| 195 | |
| 196 default: | |
| 197 break; | |
| 198 } | |
| 199 } | |
| 200 } | |
| 201 } | |
| 202 else if (content.isMember(KEY_BULK_DATA_URI) && | |
| 203 content[KEY_BULK_DATA_URI].type() == Json::stringValue) | |
| 204 { | |
| 205 pugi::xml_node child = node.append_child("BulkData"); | |
| 206 child.append_attribute("URI").set_value(content[KEY_BULK_DATA_URI].asCString()); | |
| 207 } | |
| 208 else if (content.isMember(KEY_INLINE_BINARY) && | |
| 209 content[KEY_INLINE_BINARY].type() == Json::stringValue) | |
| 210 { | |
| 211 pugi::xml_node child = node.append_child("InlineBinary"); | |
| 212 child.text() = content[KEY_INLINE_BINARY].asCString(); | |
| 213 } | |
| 214 } | |
| 215 } | |
| 216 #endif | |
| 217 | |
| 218 | |
| 219 #if ORTHANC_ENABLE_PUGIXML == 1 | |
| 220 static void DicomWebJsonToXml(pugi::xml_document& target, | |
| 221 const Json::Value& source) | |
| 222 { | |
| 223 pugi::xml_node root = target.append_child("NativeDicomModel"); | |
| 224 root.append_attribute("xmlns").set_value("http://dicom.nema.org/PS3.19/models/NativeDICOM"); | |
| 225 root.append_attribute("xsi:schemaLocation").set_value("http://dicom.nema.org/PS3.19/models/NativeDICOM"); | |
| 226 root.append_attribute("xmlns:xsi").set_value("http://www.w3.org/2001/XMLSchema-instance"); | |
| 227 | |
| 228 ExploreXmlDataset(root, source); | |
| 229 | |
| 230 pugi::xml_node decl = target.prepend_child(pugi::node_declaration); | |
| 231 decl.append_attribute("version").set_value("1.0"); | |
| 232 decl.append_attribute("encoding").set_value("utf-8"); | |
| 233 } | |
| 234 #endif | |
| 235 | |
| 236 | |
| 237 std::string DicomWebJsonVisitor::FormatTag(const DicomTag& tag) | |
| 238 { | |
| 239 char buf[16]; | |
| 240 sprintf(buf, "%04X%04X", tag.GetGroup(), tag.GetElement()); | |
| 241 return std::string(buf); | |
| 242 } | |
| 243 | |
| 244 | |
| 245 Json::Value& DicomWebJsonVisitor::CreateNode(const std::vector<DicomTag>& parentTags, | |
| 246 const std::vector<size_t>& parentIndexes, | |
| 247 const DicomTag& tag) | |
| 248 { | |
| 249 assert(parentTags.size() == parentIndexes.size()); | |
| 250 | |
| 251 Json::Value* node = &result_; | |
| 252 | |
| 253 for (size_t i = 0; i < parentTags.size(); i++) | |
| 254 { | |
| 255 std::string t = FormatTag(parentTags[i]); | |
| 256 | |
| 257 if (!node->isMember(t)) | |
| 258 { | |
| 259 Json::Value item = Json::objectValue; | |
| 260 item[KEY_VR] = KEY_SQ; | |
| 261 item[KEY_VALUE] = Json::arrayValue; | |
| 262 item[KEY_VALUE].append(Json::objectValue); | |
| 263 (*node) [t] = item; | |
| 264 | |
| 265 node = &(*node)[t][KEY_VALUE][0]; | |
| 266 } | |
| 267 else if ((*node) [t].type() != Json::objectValue || | |
| 268 !(*node) [t].isMember(KEY_VR) || | |
| 269 (*node) [t][KEY_VR].type() != Json::stringValue || | |
| 270 (*node) [t][KEY_VR].asString() != KEY_SQ || | |
| 271 !(*node) [t].isMember(KEY_VALUE) || | |
| 272 (*node) [t][KEY_VALUE].type() != Json::arrayValue) | |
| 273 { | |
| 274 throw OrthancException(ErrorCode_InternalError); | |
| 275 } | |
| 276 else | |
| 277 { | |
| 278 size_t currentSize = (*node) [t][KEY_VALUE].size(); | |
| 279 | |
| 280 if (parentIndexes[i] < currentSize) | |
| 281 { | |
| 282 // The node already exists | |
| 283 } | |
| 284 else if (parentIndexes[i] == currentSize) | |
| 285 { | |
| 286 (*node) [t][KEY_VALUE].append(Json::objectValue); | |
| 287 } | |
| 288 else | |
| 289 { | |
| 290 throw OrthancException(ErrorCode_InternalError); | |
| 291 } | |
| 292 | |
| 293 node = &(*node) [t][KEY_VALUE][Json::ArrayIndex(parentIndexes[i])]; | |
| 294 } | |
| 295 } | |
| 296 | |
| 297 assert(node->type() == Json::objectValue); | |
| 298 | |
| 299 std::string t = FormatTag(tag); | |
| 300 if (node->isMember(t)) | |
| 301 { | |
| 302 throw OrthancException(ErrorCode_InternalError); | |
| 303 } | |
| 304 else | |
| 305 { | |
| 306 (*node) [t] = Json::objectValue; | |
| 307 return (*node) [t]; | |
| 308 } | |
| 309 } | |
| 310 | |
| 311 | |
| 312 Json::Value DicomWebJsonVisitor::FormatInteger(int64_t value) | |
| 313 { | |
| 314 if (value < 0) | |
| 315 { | |
| 316 return Json::Value(static_cast<int32_t>(value)); | |
| 317 } | |
| 318 else | |
| 319 { | |
| 320 return Json::Value(static_cast<uint32_t>(value)); | |
| 321 } | |
| 322 } | |
| 323 | |
| 324 | |
| 325 Json::Value DicomWebJsonVisitor::FormatDouble(double value) | |
| 326 { | |
| 3312 | 327 try |
| 328 { | |
| 329 long long a = boost::math::llround<double>(value); | |
| 3202 | 330 |
| 3312 | 331 double d = fabs(value - static_cast<double>(a)); |
| 3202 | 332 |
| 3312 | 333 if (d <= std::numeric_limits<double>::epsilon() * 100.0) |
| 334 { | |
| 335 return FormatInteger(a); | |
| 336 } | |
| 337 else | |
| 338 { | |
| 339 return Json::Value(value); | |
| 340 } | |
| 341 } | |
| 342 catch (boost::math::rounding_error&) | |
| 3202 | 343 { |
| 3312 | 344 // Can occur if "long long" is too small to receive this value |
| 345 // (e.g. infinity) | |
| 3202 | 346 return Json::Value(value); |
| 347 } | |
| 348 } | |
| 349 | |
| 350 | |
| 351 #if ORTHANC_ENABLE_PUGIXML == 1 | |
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352 void DicomWebJsonVisitor::FormatXml(std::string& target) const |
| 3202 | 353 { |
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354 pugi::xml_document doc; |
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355 DicomWebJsonToXml(doc, result_); |
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356 Toolbox::XmlToString(target, doc); |
| 3202 | 357 } |
| 358 #endif | |
| 359 | |
| 360 | |
| 361 void DicomWebJsonVisitor::VisitEmptySequence(const std::vector<DicomTag>& parentTags, | |
| 362 const std::vector<size_t>& parentIndexes, | |
| 363 const DicomTag& tag) | |
| 364 { | |
| 365 if (tag.GetElement() != 0x0000) | |
| 366 { | |
| 367 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 368 node[KEY_VR] = EnumerationToString(ValueRepresentation_Sequence); | |
| 369 } | |
| 370 } | |
| 371 | |
| 372 | |
| 373 void DicomWebJsonVisitor::VisitBinary(const std::vector<DicomTag>& parentTags, | |
| 374 const std::vector<size_t>& parentIndexes, | |
| 375 const DicomTag& tag, | |
| 376 ValueRepresentation vr, | |
| 377 const void* data, | |
| 378 size_t size) | |
| 379 { | |
| 380 assert(vr == ValueRepresentation_OtherByte || | |
| 381 vr == ValueRepresentation_OtherDouble || | |
| 382 vr == ValueRepresentation_OtherFloat || | |
| 383 vr == ValueRepresentation_OtherLong || | |
| 384 vr == ValueRepresentation_OtherWord || | |
| 385 vr == ValueRepresentation_Unknown); | |
| 386 | |
| 387 if (tag.GetElement() != 0x0000) | |
| 388 { | |
| 389 BinaryMode mode; | |
| 390 std::string bulkDataUri; | |
| 391 | |
| 392 if (formatter_ == NULL) | |
| 393 { | |
| 394 mode = BinaryMode_InlineBinary; | |
| 395 } | |
| 396 else | |
| 397 { | |
| 398 mode = formatter_->Format(bulkDataUri, parentTags, parentIndexes, tag, vr); | |
| 399 } | |
| 400 | |
| 401 if (mode != BinaryMode_Ignore) | |
| 402 { | |
| 403 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 404 node[KEY_VR] = EnumerationToString(vr); | |
| 405 | |
| 406 switch (mode) | |
| 407 { | |
| 408 case BinaryMode_BulkDataUri: | |
| 409 node[KEY_BULK_DATA_URI] = bulkDataUri; | |
| 410 break; | |
| 411 | |
| 412 case BinaryMode_InlineBinary: | |
| 413 { | |
| 414 std::string tmp(static_cast<const char*>(data), size); | |
| 415 | |
| 416 std::string base64; | |
| 417 Toolbox::EncodeBase64(base64, tmp); | |
| 418 | |
| 419 node[KEY_INLINE_BINARY] = base64; | |
| 420 break; | |
| 421 } | |
| 422 | |
| 423 default: | |
| 424 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 425 } | |
| 426 } | |
| 427 } | |
| 428 } | |
| 429 | |
| 430 | |
| 431 void DicomWebJsonVisitor::VisitIntegers(const std::vector<DicomTag>& parentTags, | |
| 432 const std::vector<size_t>& parentIndexes, | |
| 433 const DicomTag& tag, | |
| 434 ValueRepresentation vr, | |
| 435 const std::vector<int64_t>& values) | |
| 436 { | |
| 437 if (tag.GetElement() != 0x0000 && | |
| 438 vr != ValueRepresentation_NotSupported) | |
| 439 { | |
| 440 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 441 node[KEY_VR] = EnumerationToString(vr); | |
| 442 | |
| 443 if (!values.empty()) | |
| 444 { | |
| 445 Json::Value content = Json::arrayValue; | |
| 446 for (size_t i = 0; i < values.size(); i++) | |
| 447 { | |
| 448 content.append(FormatInteger(values[i])); | |
| 449 } | |
| 450 | |
| 451 node[KEY_VALUE] = content; | |
| 452 } | |
| 453 } | |
| 454 } | |
| 455 | |
| 456 void DicomWebJsonVisitor::VisitDoubles(const std::vector<DicomTag>& parentTags, | |
| 457 const std::vector<size_t>& parentIndexes, | |
| 458 const DicomTag& tag, | |
| 459 ValueRepresentation vr, | |
| 460 const std::vector<double>& values) | |
| 461 { | |
| 462 if (tag.GetElement() != 0x0000 && | |
| 463 vr != ValueRepresentation_NotSupported) | |
| 464 { | |
| 465 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 466 node[KEY_VR] = EnumerationToString(vr); | |
| 467 | |
| 468 if (!values.empty()) | |
| 469 { | |
| 470 Json::Value content = Json::arrayValue; | |
| 471 for (size_t i = 0; i < values.size(); i++) | |
| 472 { | |
| 473 content.append(FormatDouble(values[i])); | |
| 474 } | |
| 475 | |
| 476 node[KEY_VALUE] = content; | |
| 477 } | |
| 478 } | |
| 479 } | |
| 480 | |
| 481 | |
| 482 void DicomWebJsonVisitor::VisitAttributes(const std::vector<DicomTag>& parentTags, | |
| 483 const std::vector<size_t>& parentIndexes, | |
| 484 const DicomTag& tag, | |
| 485 const std::vector<DicomTag>& values) | |
| 486 { | |
| 487 if (tag.GetElement() != 0x0000) | |
| 488 { | |
| 489 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 490 node[KEY_VR] = EnumerationToString(ValueRepresentation_AttributeTag); | |
| 491 | |
| 492 if (!values.empty()) | |
| 493 { | |
| 494 Json::Value content = Json::arrayValue; | |
| 495 for (size_t i = 0; i < values.size(); i++) | |
| 496 { | |
| 497 content.append(FormatTag(values[i])); | |
| 498 } | |
| 499 | |
| 500 node[KEY_VALUE] = content; | |
| 501 } | |
| 502 } | |
| 503 } | |
| 504 | |
| 505 | |
| 506 ITagVisitor::Action | |
| 507 DicomWebJsonVisitor::VisitString(std::string& newValue, | |
| 508 const std::vector<DicomTag>& parentTags, | |
| 509 const std::vector<size_t>& parentIndexes, | |
| 510 const DicomTag& tag, | |
| 511 ValueRepresentation vr, | |
| 512 const std::string& value) | |
| 513 { | |
| 514 if (tag.GetElement() == 0x0000 || | |
| 515 vr == ValueRepresentation_NotSupported) | |
| 516 { | |
| 517 return Action_None; | |
| 518 } | |
| 519 else | |
| 520 { | |
| 521 Json::Value& node = CreateNode(parentTags, parentIndexes, tag); | |
| 522 node[KEY_VR] = EnumerationToString(vr); | |
| 523 | |
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524 #if 0 |
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525 /** |
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526 * TODO - The JSON file has an UTF-8 encoding, thus DCMTK |
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527 * replaces the specific character set with "ISO_IR 192" |
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528 * (UNICODE UTF-8). On Google Cloud Healthcare, however, the |
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529 * source encoding is reported, which seems more logical. We |
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530 * thus choose the Google convention. Enabling this block will |
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531 * mimic the DCMTK behavior. |
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532 **/ |
| 3202 | 533 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET) |
| 534 { | |
| 535 node[KEY_VALUE].append("ISO_IR 192"); | |
| 536 } | |
| 537 else | |
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538 #endif |
| 3202 | 539 { |
| 540 std::string truncated; | |
| 541 | |
| 542 if (!value.empty() && | |
| 543 value[value.size() - 1] == '\0') | |
| 544 { | |
| 545 truncated = value.substr(0, value.size() - 1); | |
| 546 } | |
| 547 else | |
| 548 { | |
| 549 truncated = value; | |
| 550 } | |
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551 |
| 3202 | 552 if (!truncated.empty()) |
| 553 { | |
| 554 std::vector<std::string> tokens; | |
| 555 Toolbox::TokenizeString(tokens, truncated, '\\'); | |
| 556 | |
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557 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET && |
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558 tokens.size() > 1 && |
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559 tokens[0].empty()) |
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560 { |
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561 // Specific character set with code extension: Remove the |
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562 // first element from the vector of encodings |
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563 tokens.erase(tokens.begin()); |
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564 } |
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565 |
| 3202 | 566 node[KEY_VALUE] = Json::arrayValue; |
| 567 for (size_t i = 0; i < tokens.size(); i++) | |
| 568 { | |
| 569 try | |
| 570 { | |
| 571 switch (vr) | |
| 572 { | |
| 573 case ValueRepresentation_PersonName: | |
| 574 { | |
| 575 Json::Value value = Json::objectValue; | |
| 576 if (!tokens[i].empty()) | |
| 577 { | |
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578 std::vector<std::string> components; |
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579 Toolbox::TokenizeString(components, tokens[i], '='); |
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580 |
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581 if (components.size() >= 1) |
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582 { |
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583 value[KEY_ALPHABETIC] = components[0]; |
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584 } |
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585 |
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586 if (components.size() >= 2) |
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587 { |
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588 value[KEY_IDEOGRAPHIC] = components[1]; |
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589 } |
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590 |
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591 if (components.size() >= 3) |
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592 { |
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593 value[KEY_PHONETIC] = components[2]; |
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594 } |
| 3202 | 595 } |
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596 |
| 3202 | 597 node[KEY_VALUE].append(value); |
| 598 break; | |
| 599 } | |
| 600 | |
| 601 case ValueRepresentation_IntegerString: | |
| 3391 | 602 { |
| 603 /** | |
| 604 * The calls to "StripSpaces()" below fix the | |
| 605 * issue reported by Rana Asim Wajid on 2019-06-05 | |
| 606 * ("Error Exception while invoking plugin service | |
| 607 * 32: Bad file format"): | |
| 608 * https://groups.google.com/d/msg/orthanc-users/T32FovWPcCE/-hKFbfRJBgAJ | |
| 609 **/ | |
| 610 | |
| 611 std::string t = Orthanc::Toolbox::StripSpaces(tokens[i]); | |
| 612 if (t.empty()) | |
| 3202 | 613 { |
| 614 node[KEY_VALUE].append(Json::nullValue); | |
| 615 } | |
| 616 else | |
| 617 { | |
| 3391 | 618 int64_t value = boost::lexical_cast<int64_t>(t); |
| 3202 | 619 node[KEY_VALUE].append(FormatInteger(value)); |
| 620 } | |
| 3391 | 621 |
| 3202 | 622 break; |
| 3391 | 623 } |
| 3202 | 624 |
| 625 case ValueRepresentation_DecimalString: | |
| 3391 | 626 { |
| 627 std::string t = Orthanc::Toolbox::StripSpaces(tokens[i]); | |
| 628 if (t.empty()) | |
| 3202 | 629 { |
| 630 node[KEY_VALUE].append(Json::nullValue); | |
| 631 } | |
| 632 else | |
| 633 { | |
| 3391 | 634 double value = boost::lexical_cast<double>(t); |
| 3202 | 635 node[KEY_VALUE].append(FormatDouble(value)); |
| 636 } | |
| 3391 | 637 |
| 3202 | 638 break; |
| 3391 | 639 } |
| 640 | |
| 3202 | 641 default: |
| 642 if (tokens[i].empty()) | |
| 643 { | |
| 644 node[KEY_VALUE].append(Json::nullValue); | |
| 645 } | |
| 646 else | |
| 647 { | |
| 648 node[KEY_VALUE].append(tokens[i]); | |
| 649 } | |
| 650 | |
| 651 break; | |
| 652 } | |
| 653 } | |
| 654 catch (boost::bad_lexical_cast&) | |
| 655 { | |
|
3464
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
656 std::string tmp; |
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418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
657 if (value.size() < 64 && |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
658 Toolbox::IsAsciiString(value)) |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
659 { |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
660 tmp = ": " + value; |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
661 } |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
662 |
|
418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
663 LOG(WARNING) << "Ignoring DICOM tag (" << tag.Format() |
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418a89acef3b
In DICOM-to-DICOMweb/JSON conversion, be more tolerant wrt. invalid DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3448
diff
changeset
|
664 << ") with invalid content for VR " << EnumerationToString(vr) << tmp; |
| 3202 | 665 } |
| 666 } | |
| 667 } | |
| 668 } | |
| 669 } | |
| 670 | |
| 671 return Action_None; | |
| 672 } | |
| 673 } |