Mercurial > hg > orthanc
annotate OrthancServer/Sources/Database/Compatibility/GenericFind.cpp @ 5616:1e92fb051fd7 find-refactoring
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 09 May 2024 13:02:51 +0200 |
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children | 8905ffa45fc2 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2024 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU General Public License as |
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10 * published by the Free Software Foundation, either version 3 of the |
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11 * License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU General Public License |
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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20 **/ |
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21 |
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22 |
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23 #include "GenericFind.h" |
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24 |
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25 #include "../../../../OrthancFramework/Sources/DicomFormat/DicomArray.h" |
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26 #include "../../../../OrthancFramework/Sources/OrthancException.h" |
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27 |
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28 #include <stack> |
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29 |
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30 |
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31 namespace Orthanc |
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32 { |
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33 namespace Compatibility |
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34 { |
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35 static bool IsRequestWithoutContraint(const FindRequest& request) |
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36 { |
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37 return (request.GetDicomTagConstraintsCount() == 0 && |
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38 request.GetMetadataConstraintsCount() == 0 && |
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39 request.GetLabels().empty() && |
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40 request.GetOrdering().empty()); |
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41 } |
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42 |
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43 void GenericFind::ExecuteFind(std::list<std::string>& identifiers, |
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44 const FindRequest& request) |
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45 { |
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46 if (IsRequestWithoutContraint(request) && |
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47 !request.GetOrthancIdentifiers().HasPatientId() && |
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48 !request.GetOrthancIdentifiers().HasStudyId() && |
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49 !request.GetOrthancIdentifiers().HasSeriesId() && |
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50 !request.GetOrthancIdentifiers().HasInstanceId()) |
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51 { |
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52 if (request.HasLimits()) |
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53 { |
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54 transaction_.GetAllPublicIds(identifiers, request.GetLevel(), request.GetLimitsSince(), request.GetLimitsCount()); |
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55 } |
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56 else |
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57 { |
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58 transaction_.GetAllPublicIds(identifiers, request.GetLevel()); |
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59 } |
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60 } |
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61 else if (IsRequestWithoutContraint(request) && |
5616 | 62 request.GetLevel() == ResourceType_Patient && |
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63 request.GetOrthancIdentifiers().HasPatientId() && |
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64 !request.GetOrthancIdentifiers().HasStudyId() && |
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65 !request.GetOrthancIdentifiers().HasSeriesId() && |
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66 !request.GetOrthancIdentifiers().HasInstanceId()) |
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67 { |
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68 identifiers.push_back(request.GetOrthancIdentifiers().GetPatientId()); |
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69 } |
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70 else if (IsRequestWithoutContraint(request) && |
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72 !request.GetOrthancIdentifiers().HasPatientId() && |
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73 request.GetOrthancIdentifiers().HasStudyId() && |
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74 !request.GetOrthancIdentifiers().HasSeriesId() && |
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75 !request.GetOrthancIdentifiers().HasInstanceId()) |
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76 { |
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77 identifiers.push_back(request.GetOrthancIdentifiers().GetStudyId()); |
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78 } |
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79 else if (IsRequestWithoutContraint(request) && |
5616 | 80 request.GetLevel() == ResourceType_Series && |
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81 !request.GetOrthancIdentifiers().HasPatientId() && |
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82 !request.GetOrthancIdentifiers().HasStudyId() && |
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83 request.GetOrthancIdentifiers().HasSeriesId() && |
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84 !request.GetOrthancIdentifiers().HasInstanceId()) |
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85 { |
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86 identifiers.push_back(request.GetOrthancIdentifiers().GetSeriesId()); |
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87 } |
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88 else if (IsRequestWithoutContraint(request) && |
5616 | 89 request.GetLevel() == ResourceType_Instance && |
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90 !request.GetOrthancIdentifiers().HasPatientId() && |
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91 !request.GetOrthancIdentifiers().HasStudyId() && |
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92 !request.GetOrthancIdentifiers().HasSeriesId() && |
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93 request.GetOrthancIdentifiers().HasInstanceId()) |
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94 { |
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95 identifiers.push_back(request.GetOrthancIdentifiers().GetInstanceId()); |
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96 } |
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97 else |
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98 { |
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99 throw OrthancException(ErrorCode_NotImplemented); // Not supported |
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100 } |
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101 } |
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102 |
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103 |
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104 void GenericFind::RetrieveMainDicomTags(FindResponse::Resource& target, |
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105 ResourceType level, |
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106 int64_t internalId) |
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107 { |
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108 DicomMap m; |
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109 transaction_.GetMainDicomTags(m, internalId); |
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110 |
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111 DicomArray a(m); |
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112 for (size_t i = 0; i < a.GetSize(); i++) |
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113 { |
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114 const DicomElement& element = a.GetElement(i); |
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115 if (element.GetValue().IsString()) |
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116 { |
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117 target.AddStringDicomTag(level, element.GetTag().GetGroup(), |
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118 element.GetTag().GetElement(), element.GetValue().GetContent()); |
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119 } |
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120 else |
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121 { |
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122 throw OrthancException(ErrorCode_BadParameterType); |
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123 } |
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124 } |
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125 } |
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126 |
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127 |
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128 static ResourceType GetTopLevelOfInterest(const FindRequest& request) |
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129 { |
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130 switch (request.GetLevel()) |
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131 { |
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132 case ResourceType_Patient: |
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133 return ResourceType_Patient; |
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134 |
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135 case ResourceType_Study: |
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136 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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137 request.IsRetrieveMetadata(ResourceType_Patient)) |
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138 { |
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139 return ResourceType_Patient; |
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140 } |
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141 else |
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142 { |
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143 return ResourceType_Study; |
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144 } |
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145 |
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146 case ResourceType_Series: |
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147 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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148 request.IsRetrieveMetadata(ResourceType_Patient)) |
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149 { |
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150 return ResourceType_Patient; |
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151 } |
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152 else if (request.IsRetrieveMainDicomTags(ResourceType_Study) || |
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153 request.IsRetrieveMetadata(ResourceType_Study)) |
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154 { |
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155 return ResourceType_Study; |
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156 } |
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157 else |
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158 { |
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159 return ResourceType_Series; |
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160 } |
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161 |
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162 case ResourceType_Instance: |
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163 if (request.IsRetrieveMainDicomTags(ResourceType_Patient) || |
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164 request.IsRetrieveMetadata(ResourceType_Patient)) |
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165 { |
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166 return ResourceType_Patient; |
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167 } |
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168 else if (request.IsRetrieveMainDicomTags(ResourceType_Study) || |
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169 request.IsRetrieveMetadata(ResourceType_Study)) |
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170 { |
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171 return ResourceType_Study; |
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172 } |
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173 else if (request.IsRetrieveMainDicomTags(ResourceType_Series) || |
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174 request.IsRetrieveMetadata(ResourceType_Series)) |
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175 { |
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176 return ResourceType_Series; |
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177 } |
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178 else |
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179 { |
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180 return ResourceType_Instance; |
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181 } |
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182 |
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183 default: |
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184 throw OrthancException(ErrorCode_ParameterOutOfRange); |
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185 } |
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186 } |
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187 |
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188 |
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189 void GenericFind::ExecuteExpand(FindResponse& response, |
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190 const FindRequest& request, |
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191 const std::string& identifier) |
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192 { |
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193 int64_t internalId; |
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194 ResourceType level; |
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195 std::string parent; |
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196 |
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197 if (request.IsRetrieveParentIdentifier()) |
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198 { |
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199 if (!transaction_.LookupResourceAndParent(internalId, level, parent, identifier)) |
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200 { |
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201 return; // The resource is not available anymore |
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202 } |
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203 |
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204 if (level == ResourceType_Patient) |
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205 { |
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206 if (!parent.empty()) |
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207 { |
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208 throw OrthancException(ErrorCode_DatabasePlugin); |
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209 } |
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210 } |
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211 else |
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212 { |
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213 if (parent.empty()) |
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214 { |
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215 throw OrthancException(ErrorCode_DatabasePlugin); |
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216 } |
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217 } |
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218 } |
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219 else |
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220 { |
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221 if (!transaction_.LookupResource(internalId, level, identifier)) |
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222 { |
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223 return; // The resource is not available anymore |
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224 } |
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225 } |
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226 |
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227 if (level != request.GetLevel()) |
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228 { |
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229 throw OrthancException(ErrorCode_DatabasePlugin); |
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230 } |
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231 |
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232 std::unique_ptr<FindResponse::Resource> resource(new FindResponse::Resource(request.GetLevel(), internalId, identifier)); |
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233 |
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234 if (request.IsRetrieveParentIdentifier()) |
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235 { |
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236 assert(!parent.empty()); |
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237 resource->SetParentIdentifier(parent); |
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238 } |
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239 |
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240 { |
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241 int64_t currentId = internalId; |
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242 ResourceType currentLevel = level; |
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243 const ResourceType topLevel = GetTopLevelOfInterest(request); |
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244 |
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245 for (;;) |
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246 { |
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247 if (request.IsRetrieveMainDicomTags(currentLevel)) |
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248 { |
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249 RetrieveMainDicomTags(*resource, currentLevel, currentId); |
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250 } |
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251 |
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252 if (request.IsRetrieveMetadata(currentLevel)) |
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253 { |
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254 transaction_.GetAllMetadata(resource->GetMetadata(currentLevel), currentId); |
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255 } |
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256 |
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257 if (currentLevel == topLevel) |
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258 { |
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259 break; |
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260 } |
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261 else |
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262 { |
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263 int64_t parentId; |
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264 if (transaction_.LookupParent(parentId, currentId)) |
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265 { |
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266 currentId = parentId; |
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267 currentLevel = GetParentResourceType(currentLevel); |
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268 } |
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269 else |
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270 { |
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271 throw OrthancException(ErrorCode_DatabasePlugin); |
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272 } |
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273 } |
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274 } |
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275 } |
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276 |
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277 if (request.IsRetrieveLabels()) |
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278 { |
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279 transaction_.ListLabels(resource->GetLabels(), internalId); |
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280 } |
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281 |
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282 if (request.IsRetrieveAttachments()) |
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283 { |
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284 std::set<FileContentType> attachments; |
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285 transaction_.ListAvailableAttachments(attachments, internalId); |
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286 |
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287 for (std::set<FileContentType>::const_iterator it = attachments.begin(); it != attachments.end(); ++it) |
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288 { |
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289 FileInfo info; |
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290 int64_t revision; |
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291 if (transaction_.LookupAttachment(info, revision, internalId, *it) && |
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292 info.GetContentType() == *it) |
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293 { |
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294 resource->AddAttachment(info); |
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295 } |
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296 else |
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|
297 { |
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298 throw OrthancException(ErrorCode_DatabasePlugin); |
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299 } |
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|
300 } |
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301 } |
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302 |
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303 if (request.IsRetrieveChildrenIdentifiers()) |
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304 { |
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305 std::list<std::string> children; |
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306 transaction_.GetChildrenPublicId(children, internalId); |
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|
307 |
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308 for (std::list<std::string>::const_iterator it = children.begin(); it != children.end(); ++it) |
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309 { |
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|
310 resource->AddChildIdentifier(*it); |
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311 } |
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312 } |
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313 |
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314 for (std::set<MetadataType>::const_iterator it = request.GetRetrieveChildrenMetadata().begin(); |
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|
315 it != request.GetRetrieveChildrenMetadata().end(); ++it) |
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316 { |
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317 std::list<std::string> values; |
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318 transaction_.GetChildrenMetadata(values, internalId, *it); |
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319 resource->AddChildrenMetadata(*it, values); |
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320 } |
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321 |
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322 if (request.IsRetrieveOneInstanceIdentifier()) |
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323 { |
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324 int64_t currentId = internalId; |
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325 ResourceType currentLevel = level; |
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326 |
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327 while (currentLevel != ResourceType_Instance) |
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328 { |
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329 std::list<int64_t> children; |
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330 transaction_.GetChildrenInternalId(children, currentId); |
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331 if (children.empty()) |
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332 { |
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333 throw OrthancException(ErrorCode_DatabasePlugin); |
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334 } |
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335 else |
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336 { |
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preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5606
diff
changeset
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337 currentId = children.front(); |
4690a0d2b01e
preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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338 currentLevel = GetChildResourceType(currentLevel); |
5596
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5595
diff
changeset
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339 } |
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5595
diff
changeset
|
340 } |
5609
4690a0d2b01e
preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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341 |
4690a0d2b01e
preliminary support of requestedTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5606
diff
changeset
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342 resource->SetOneInstanceIdentifier(transaction_.GetPublicId(currentId)); |
5596
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5595
diff
changeset
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343 } |
81a29ad7fb4b
added possibility to retrieve main DICOM tags and metadata at any level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5595
diff
changeset
|
344 |
5593
862b54b4cfe2
implemented the default multi-stage find/expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5592
diff
changeset
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345 response.Add(resource.release()); |
5554
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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346 } |
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
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347 } |
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
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348 } |