Mercurial > hg > orthanc

annotate OrthancServer/ServerContext.cpp @ 997:1b1d51e9f1a2 lua-scripting

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return Json from Lua
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 03 Jul 2014 18:12:50 +0200
parents cf52f3bcb2b3
children 4136fab6a639
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "PrecompiledHeadersServer.h"
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34 #include "ServerContext.h"
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35
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36 #include "../Core/HttpServer/FilesystemHttpSender.h"
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37 #include "../Core/Lua/LuaFunctionCall.h"
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38 #include "FromDcmtkBridge.h"
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39 #include "ServerToolbox.h"
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40 #include "OrthancInitialization.h"
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41
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42 #include <glog/logging.h>
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43 #include <EmbeddedResources.h>
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44 #include <dcmtk/dcmdata/dcfilefo.h>
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45
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46 #define ENABLE_DICOM_CACHE 1
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47
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48 static const char* RECEIVED_INSTANCE_FILTER = "ReceivedInstanceFilter";
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49 static const char* ON_STORED_INSTANCE = "OnStoredInstance";
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50
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51 static const size_t DICOM_CACHE_SIZE = 2;
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52
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53 /**
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54 * IMPORTANT: We make the assumption that the same instance of
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55 * FileStorage can be accessed from multiple threads. This seems OK
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56 * since the filesystem implements the required locking mechanisms,
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57 * but maybe a read-writer lock on the "FileStorage" could be
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58 * useful. Conversely, "ServerIndex" already implements mutex-based
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59 * locking.
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60 **/
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61
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62 namespace Orthanc
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63 {
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64 ServerContext::ServerContext(const boost::filesystem::path& storagePath,
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65 const boost::filesystem::path& indexPath) :
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66 storage_(storagePath.string()),
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67 index_(*this, indexPath.string()),
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68 accessor_(storage_),
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69 compressionEnabled_(false),
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70 provider_(*this),
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71 dicomCache_(provider_, DICOM_CACHE_SIZE),
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72 scheduler_(Configuration::GetGlobalIntegerParameter("LimitJobs", 10))
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73 {
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74 scu_.SetLocalApplicationEntityTitle(Configuration::GetGlobalStringParameter("DicomAet", "ORTHANC"));
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75 //scu_.SetMillisecondsBeforeClose(1); // The connection is always released
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76
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77 lua_.Execute(Orthanc::EmbeddedResources::LUA_TOOLBOX);
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78 }
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79
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80 void ServerContext::SetCompressionEnabled(bool enabled)
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81 {
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82 if (enabled)
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83 LOG(WARNING) << "Disk compression is enabled";
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84 else
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85 LOG(WARNING) << "Disk compression is disabled";
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86
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87 compressionEnabled_ = enabled;
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88 }
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89
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90 void ServerContext::RemoveFile(const std::string& fileUuid)
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91 {
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92 storage_.Remove(fileUuid);
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93 }
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96 bool ServerContext::ApplyReceivedInstanceFilter(const Json::Value& dicomJson,
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97 const std::string& remoteAet)
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98 {
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99 LuaContextLocker locker(*this);
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100
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101 if (locker.GetLua().IsExistingFunction(RECEIVED_INSTANCE_FILTER))
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102 {
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103 Json::Value simplified;
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104 SimplifyTags(simplified, dicomJson);
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105
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106 LuaFunctionCall call(locker.GetLua(), RECEIVED_INSTANCE_FILTER);
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107 call.PushJson(simplified);
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108 call.PushString(remoteAet);
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109
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110 if (!call.ExecutePredicate())
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111 {
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112 return false;
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113 }
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114 }
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115
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116 return true;
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117 }
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119
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120 StoreStatus ServerContext::Store(const char* dicomInstance,
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121 size_t dicomSize,
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122 const DicomMap& dicomSummary,
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123 const Json::Value& dicomJson,
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124 const std::string& remoteAet)
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125 {
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126 // Test if the instance must be filtered out
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127 if (!ApplyReceivedInstanceFilter(dicomJson, remoteAet))
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128 {
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129 LOG(INFO) << "An incoming instance has been discarded by the filter";
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130 return StoreStatus_FilteredOut;
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131 }
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132
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diff changeset
133 if (compressionEnabled_)
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134 {
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135 accessor_.SetCompressionForNextOperations(CompressionType_Zlib);
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136 }
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137 else
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138 {
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139 accessor_.SetCompressionForNextOperations(CompressionType_None);
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140 }
232
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141
304
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142 FileInfo dicomInfo = accessor_.Write(dicomInstance, dicomSize, FileContentType_Dicom);
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143 FileInfo jsonInfo = accessor_.Write(dicomJson.toStyledString(), FileContentType_DicomAsJson);
232
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144
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145 ServerIndex::Attachments attachments;
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146 attachments.push_back(dicomInfo);
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147 attachments.push_back(jsonInfo);
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148
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149 StoreStatus status = index_.Store(dicomSummary, attachments, remoteAet);
224
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150
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151 if (status != StoreStatus_Success)
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152 {
232
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153 storage_.Remove(dicomInfo.GetUuid());
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154 storage_.Remove(jsonInfo.GetUuid());
224
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155 }
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156
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157 switch (status)
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158 {
397
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159 case StoreStatus_Success:
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160 LOG(INFO) << "New instance stored";
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161 break;
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162
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163 case StoreStatus_AlreadyStored:
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164 LOG(INFO) << "Already stored";
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165 break;
224
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166
397
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167 case StoreStatus_Failure:
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168 LOG(ERROR) << "Store failure";
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169 break;
224
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170
397
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171 default:
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172 // This should never happen
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173 break;
224
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174 }
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175
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176 return status;
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177 }
226
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178
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179
697
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180 void ServerContext::AnswerDicomFile(RestApiOutput& output,
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181 const std::string& instancePublicId,
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182 FileContentType content)
226
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183 {
232
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184 FileInfo attachment;
236
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185 if (!index_.LookupAttachment(attachment, instancePublicId, content))
232
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diff changeset
186 {
236
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187 throw OrthancException(ErrorCode_InternalError);
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188 }
226
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diff changeset
189
236
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diff changeset
190 accessor_.SetCompressionForNextOperations(attachment.GetCompressionType());
320
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diff changeset
191
236
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diff changeset
192 std::auto_ptr<HttpFileSender> sender(accessor_.ConstructHttpFileSender(attachment.GetUuid()));
320
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193 sender->SetContentType("application/dicom");
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194 sender->SetDownloadFilename(instancePublicId + ".dcm");
236
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diff changeset
195 output.AnswerFile(*sender);
226
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diff changeset
196 }
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diff changeset
197
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198
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diff changeset
199 void ServerContext::ReadJson(Json::Value& result,
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200 const std::string& instancePublicId)
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201 {
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diff changeset
202 std::string s;
697
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203 ReadFile(s, instancePublicId, FileContentType_DicomAsJson);
226
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diff changeset
204
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diff changeset
205 Json::Reader reader;
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206 if (!reader.parse(s, result))
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207 {
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208 throw OrthancException("Corrupted JSON file");
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209 }
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diff changeset
210 }
227
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diff changeset
211
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diff changeset
212
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213 void ServerContext::ReadFile(std::string& result,
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diff changeset
214 const std::string& instancePublicId,
697
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diff changeset
215 FileContentType content,
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diff changeset
216 bool uncompressIfNeeded)
227
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diff changeset
217 {
232
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diff changeset
218 FileInfo attachment;
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diff changeset
219 if (!index_.LookupAttachment(attachment, instancePublicId, content))
227
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diff changeset
220 {
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diff changeset
221 throw OrthancException(ErrorCode_InternalError);
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diff changeset
222 }
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diff changeset
223
697
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diff changeset
224 if (uncompressIfNeeded)
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diff changeset
225 {
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diff changeset
226 accessor_.SetCompressionForNextOperations(attachment.GetCompressionType());
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diff changeset
227 }
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diff changeset
228 else
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diff changeset
229 {
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diff changeset
230 accessor_.SetCompressionForNextOperations(CompressionType_None);
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diff changeset
231 }
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diff changeset
232
232
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diff changeset
233 accessor_.Read(result, attachment.GetUuid());
227
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diff changeset
234 }
285
4031f73fe0e4 access to the raw dicom tags
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parents: 269
diff changeset
235
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parents: 269
diff changeset
236
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diff changeset
237 IDynamicObject* ServerContext::DicomCacheProvider::Provide(const std::string& instancePublicId)
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diff changeset
238 {
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diff changeset
239 std::string content;
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diff changeset
240 context_.ReadFile(content, instancePublicId, FileContentType_Dicom);
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diff changeset
241 return new ParsedDicomFile(content);
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diff changeset
242 }
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diff changeset
243
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diff changeset
244
778
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
245 ServerContext::DicomCacheLocker::DicomCacheLocker(ServerContext& that,
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diff changeset
246 const std::string& instancePublicId) :
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diff changeset
247 that_(that)
285
4031f73fe0e4 access to the raw dicom tags
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diff changeset
248 {
291
4d7469f72a0b embedding of dicom dictionaries
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diff changeset
249 #if ENABLE_DICOM_CACHE == 0
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diff changeset
250 static std::auto_ptr<IDynamicObject> p;
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diff changeset
251 p.reset(provider_.Provide(instancePublicId));
778
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
252 dicom_ = dynamic_cast<ParsedDicomFile*>(p.get());
291
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diff changeset
253 #else
778
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
254 that_.dicomCacheMutex_.lock();
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diff changeset
255 dicom_ = &dynamic_cast<ParsedDicomFile&>(that_.dicomCache_.Access(instancePublicId));
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diff changeset
256 #endif
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
257 }
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
258
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
259
aebf0071020e refactoring of the mutex for the dicom cache
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diff changeset
260 ServerContext::DicomCacheLocker::~DicomCacheLocker()
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diff changeset
261 {
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diff changeset
262 #if ENABLE_DICOM_CACHE == 0
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diff changeset
263 #else
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diff changeset
264 that_.dicomCacheMutex_.unlock();
291
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diff changeset
265 #endif
285
4031f73fe0e4 access to the raw dicom tags
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diff changeset
266 }
304
4eea080e6e7a refactoring
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parents: 291
diff changeset
267
4eea080e6e7a refactoring
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diff changeset
268
792
111a1738e11e refactoring
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diff changeset
269 static DcmFileFormat& GetDicom(ParsedDicomFile& file)
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diff changeset
270 {
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diff changeset
271 return *reinterpret_cast<DcmFileFormat*>(file.GetDcmtkObject());
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diff changeset
272 }
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diff changeset
273
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274
304
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275 StoreStatus ServerContext::Store(std::string& resultPublicId,
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276 ParsedDicomFile& dicomInstance,
304
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277 const char* dicomBuffer,
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278 size_t dicomSize)
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279 {
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280 DicomMap dicomSummary;
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281 FromDcmtkBridge::Convert(dicomSummary, *GetDicom(dicomInstance).getDataset());
304
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282
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283 try
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284 {
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285 DicomInstanceHasher hasher(dicomSummary);
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286 resultPublicId = hasher.HashInstance();
304
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287
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288 Json::Value dicomJson;
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289 FromDcmtkBridge::ToJson(dicomJson, *GetDicom(dicomInstance).getDataset());
304
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290
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291 StoreStatus status = StoreStatus_Failure;
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292 if (dicomSize > 0)
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293 {
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294 status = Store(dicomBuffer, dicomSize, dicomSummary, dicomJson, "");
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295 }
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296
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297 return status;
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298 }
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299 catch (OrthancException& e)
304
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300 {
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301 if (e.GetErrorCode() == ErrorCode_InexistentTag)
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302 {
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303 LogMissingRequiredTag(dicomSummary);
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304 }
304
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305
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306 throw;
730
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307 }
304
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308 }
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309
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310
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311 StoreStatus ServerContext::Store(std::string& resultPublicId,
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312 ParsedDicomFile& dicomInstance)
304
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313 {
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314 std::string buffer;
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315 if (!FromDcmtkBridge::SaveToMemoryBuffer(buffer, GetDicom(dicomInstance).getDataset()))
304
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316 {
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317 throw OrthancException(ErrorCode_InternalError);
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318 }
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319
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320 if (buffer.size() == 0)
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321 return Store(resultPublicId, dicomInstance, NULL, 0);
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322 else
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323 return Store(resultPublicId, dicomInstance, &buffer[0], buffer.size());
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324 }
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325
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326
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327 StoreStatus ServerContext::Store(std::string& resultPublicId,
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328 const char* dicomBuffer,
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329 size_t dicomSize)
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330 {
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331 ParsedDicomFile dicom(dicomBuffer, dicomSize);
791
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332 return Store(resultPublicId, dicom, dicomBuffer, dicomSize);
304
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333 }
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334
791
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335
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336 StoreStatus ServerContext::Store(std::string& resultPublicId,
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337 const std::string& dicomContent)
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338 {
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339 if (dicomContent.size() == 0)
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340 {
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341 return Store(resultPublicId, NULL, 0);
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342 }
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343 else
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344 {
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345 return Store(resultPublicId, &dicomContent[0], dicomContent.size());
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346 }
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347 }
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348
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diff changeset
349
695
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diff changeset
350 void ServerContext::SetStoreMD5ForAttachments(bool storeMD5)
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351 {
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352 LOG(INFO) << "Storing MD5 for attachments: " << (storeMD5 ? "yes" : "no");
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353 accessor_.SetStoreMD5(storeMD5);
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354 }
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diff changeset
355
699
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diff changeset
356
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diff changeset
357 bool ServerContext::AddAttachment(const std::string& resourceId,
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diff changeset
358 FileContentType attachmentType,
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diff changeset
359 const void* data,
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diff changeset
360 size_t size)
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diff changeset
361 {
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diff changeset
362 LOG(INFO) << "Adding attachment " << EnumerationToString(attachmentType) << " to resource " << resourceId;
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parents: 697
diff changeset
363
2929e17f8447 add attachments to resources
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parents: 697
diff changeset
364 if (compressionEnabled_)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
365 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
366 accessor_.SetCompressionForNextOperations(CompressionType_Zlib);
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diff changeset
367 }
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parents: 697
diff changeset
368 else
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diff changeset
369 {
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diff changeset
370 accessor_.SetCompressionForNextOperations(CompressionType_None);
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diff changeset
371 }
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diff changeset
372
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diff changeset
373 FileInfo info = accessor_.Write(data, size, attachmentType);
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diff changeset
374 StoreStatus status = index_.AddAttachment(info, resourceId);
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diff changeset
375
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diff changeset
376 if (status != StoreStatus_Success)
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377 {
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diff changeset
378 storage_.Remove(info.GetUuid());
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diff changeset
379 return false;
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diff changeset
380 }
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diff changeset
381 else
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diff changeset
382 {
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diff changeset
383 return true;
2929e17f8447 add attachments to resources
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diff changeset
384 }
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diff changeset
385 }
224
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parents:
diff changeset
386 }