Mercurial > hg > orthanc

annotate OrthancServer/ServerJobs/MergeStudyJob.cpp @ 3072:1b05fd072c57 db-changes

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 02 Jan 2019 11:47:58 +0100
parents 4e43e67f8ecf
children beeeb6096f27
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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34 #include "MergeStudyJob.h"
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36 #include "../../Core/DicomParsing/FromDcmtkBridge.h"
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37 #include "../../Core/Logging.h"
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38 #include "../../Core/SerializationToolbox.h"
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41 namespace Orthanc
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42 {
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43 void MergeStudyJob::AddSourceSeriesInternal(const std::string& series)
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44 {
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45 // Generate a target SeriesInstanceUID for this series
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46 seriesUidMap_[series] = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Series);
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48 // Add all the instances of the series as to be processed
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49 std::list<std::string> instances;
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50 context_.GetIndex().GetChildren(instances, series);
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51
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52 for (std::list<std::string>::const_iterator
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53 it = instances.begin(); it != instances.end(); ++it)
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54 {
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55 AddInstance(*it);
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56 }
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57 }
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60 void MergeStudyJob::AddSourceStudyInternal(const std::string& study)
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61 {
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62 if (study == targetStudy_)
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63 {
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64 throw OrthancException(ErrorCode_UnknownResource,
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65 "Cannot merge a study into the same study: " + study);
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66 }
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67 else
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68 {
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69 std::list<std::string> series;
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70 context_.GetIndex().GetChildren(series, study);
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71
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72 for (std::list<std::string>::const_iterator
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73 it = series.begin(); it != series.end(); ++it)
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74 {
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75 AddSourceSeriesInternal(*it);
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76 }
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77 }
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78 }
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79
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81 bool MergeStudyJob::HandleInstance(const std::string& instance)
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82 {
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83 /**
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84 * Retrieve the DICOM instance to be modified
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85 **/
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86
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87 std::auto_ptr<ParsedDicomFile> modified;
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88
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89 try
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90 {
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91 ServerContext::DicomCacheLocker locker(context_, instance);
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92 modified.reset(locker.GetDicom().Clone(true));
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93 }
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94 catch (OrthancException&)
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95 {
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96 LOG(WARNING) << "An instance was removed after the job was issued: " << instance;
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97 return false;
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98 }
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99
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100
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101 /**
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102 * Chose the target UIDs
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103 **/
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104
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105 std::string series = modified->GetHasher().HashSeries();
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106
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107 SeriesUidMap::const_iterator targetSeriesUid = seriesUidMap_.find(series);
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108
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109 if (targetSeriesUid == seriesUidMap_.end())
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110 {
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111 throw OrthancException(ErrorCode_BadFileFormat); // Should never happen
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112 }
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113
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114
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115 /**
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116 * Copy the tags from the "Patient Module Attributes" and "General
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117 * Study Module Attributes" modules of the target study
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118 **/
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119
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120 for (std::set<DicomTag>::const_iterator it = removals_.begin();
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121 it != removals_.end(); ++it)
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122 {
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diff changeset
123 modified->Remove(*it);
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124 }
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parents:
diff changeset
125
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diff changeset
126 for (Replacements::const_iterator it = replacements_.begin();
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diff changeset
127 it != replacements_.end(); ++it)
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128 {
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diff changeset
129 modified->ReplacePlainString(it->first, it->second);
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130 }
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diff changeset
131
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diff changeset
132
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diff changeset
133 /**
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134 * Store the new instance into Orthanc
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diff changeset
135 **/
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diff changeset
136
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diff changeset
137 modified->ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, targetSeriesUid->second);
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138
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diff changeset
139 DicomInstanceToStore toStore;
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140 toStore.SetOrigin(origin_);
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141 toStore.SetParsedDicomFile(*modified);
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142
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diff changeset
143 std::string modifiedInstance;
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144 if (context_.Store(modifiedInstance, toStore) != StoreStatus_Success)
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145 {
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146 LOG(ERROR) << "Error while storing a modified instance " << instance;
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147 return false;
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148 }
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149
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150 return true;
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diff changeset
151 }
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152
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153
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154 bool MergeStudyJob::HandleTrailingStep()
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155 {
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diff changeset
156 if (!keepSource_)
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157 {
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158 const size_t n = GetInstancesCount();
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159
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diff changeset
160 for (size_t i = 0; i < n; i++)
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161 {
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diff changeset
162 Json::Value tmp;
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diff changeset
163 context_.DeleteResource(tmp, GetInstance(i), ResourceType_Instance);
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164 }
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165 }
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diff changeset
166
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167 return true;
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diff changeset
168 }
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diff changeset
169
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170
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diff changeset
171 MergeStudyJob::MergeStudyJob(ServerContext& context,
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172 const std::string& targetStudy) :
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173 context_(context),
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174 keepSource_(false),
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175 targetStudy_(targetStudy)
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176 {
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177 /**
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178 * Check the validity of the input ID
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179 **/
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diff changeset
180
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181 ResourceType type;
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182
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diff changeset
183 if (!context_.GetIndex().LookupResourceType(type, targetStudy) ||
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184 type != ResourceType_Study)
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185 {
2955
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diff changeset
186 throw OrthancException(ErrorCode_UnknownResource,
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187 "Cannot merge into an unknown study: " + targetStudy);
2853
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188 }
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parents:
diff changeset
189
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parents:
diff changeset
190
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diff changeset
191 /**
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parents:
diff changeset
192 * Detect the tags to be removed/replaced by parsing one child
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193 * instance of the study
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diff changeset
194 **/
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diff changeset
195
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diff changeset
196 DicomTag::AddTagsForModule(removals_, DicomModule_Patient);
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197 DicomTag::AddTagsForModule(removals_, DicomModule_Study);
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198
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diff changeset
199 std::list<std::string> instances;
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diff changeset
200 context_.GetIndex().GetChildInstances(instances, targetStudy);
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diff changeset
201
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diff changeset
202 if (instances.empty())
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diff changeset
203 {
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diff changeset
204 throw OrthancException(ErrorCode_UnknownResource);
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diff changeset
205 }
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parents:
diff changeset
206
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diff changeset
207 DicomMap dicom;
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diff changeset
208
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parents:
diff changeset
209 {
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parents:
diff changeset
210 ServerContext::DicomCacheLocker locker(context_, instances.front());
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parents:
diff changeset
211 locker.GetDicom().ExtractDicomSummary(dicom);
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parents:
diff changeset
212 }
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parents:
diff changeset
213
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diff changeset
214 const std::set<DicomTag> moduleTags = removals_;
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diff changeset
215 for (std::set<DicomTag>::const_iterator it = moduleTags.begin();
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parents:
diff changeset
216 it != moduleTags.end(); ++it)
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diff changeset
217 {
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diff changeset
218 const DicomValue* value = dicom.TestAndGetValue(*it);
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diff changeset
219 std::string str;
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diff changeset
220
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parents:
diff changeset
221 if (value != NULL &&
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parents:
diff changeset
222 value->CopyToString(str, false))
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diff changeset
223 {
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diff changeset
224 removals_.erase(*it);
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parents:
diff changeset
225 replacements_.insert(std::make_pair(*it, str));
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parents:
diff changeset
226 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
227 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
228 }
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parents:
diff changeset
229
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parents:
diff changeset
230
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parents:
diff changeset
231 void MergeStudyJob::SetOrigin(const DicomInstanceOrigin& origin)
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diff changeset
232 {
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parents:
diff changeset
233 if (IsStarted())
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parents:
diff changeset
234 {
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parents:
diff changeset
235 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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parents:
diff changeset
236 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
237 else
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parents:
diff changeset
238 {
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parents:
diff changeset
239 origin_ = origin;
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parents:
diff changeset
240 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
241 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
242
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
243
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parents:
diff changeset
244 void MergeStudyJob::SetOrigin(const RestApiCall& call)
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diff changeset
245 {
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parents:
diff changeset
246 SetOrigin(DicomInstanceOrigin::FromRest(call));
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parents:
diff changeset
247 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
248
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 void MergeStudyJob::AddSource(const std::string& studyOrSeries)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 ResourceType level;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
254 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
255 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
258 else if (!context_.GetIndex().LookupResourceType(level, studyOrSeries))
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
259 {
2955
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parents: 2860
diff changeset
260 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
261 "Cannot find this resource: " + studyOrSeries);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
263 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
265 switch (level)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267 case ResourceType_Study:
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
268 AddSourceStudyInternal(studyOrSeries);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271 case ResourceType_Series:
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272 AddSourceSeries(studyOrSeries);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
273 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
274
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275 default:
2955
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diff changeset
276 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
277 "This resource is neither a study, nor a series: " +
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
278 studyOrSeries + " is a " +
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
279 std::string(EnumerationToString(level)));
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
281 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
282 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
285 void MergeStudyJob::AddSourceSeries(const std::string& series)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
286 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
287 std::string parent;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
289 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
290 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
291 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
292 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
293 else if (!context_.GetIndex().LookupParent(parent, series, ResourceType_Study))
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
294 {
2955
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parents: 2860
diff changeset
295 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
296 "This resource is not a series: " + series);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
297 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
298 else if (parent == targetStudy_)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
299 {
2955
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parents: 2860
diff changeset
300 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
301 "Cannot merge series " + series +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
302 " into its parent study " + targetStudy_);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
303 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
305 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 AddSourceSeriesInternal(series);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
308 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
310
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
311 void MergeStudyJob::AddSourceStudy(const std::string& study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
312 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
313 ResourceType actualLevel;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
316 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
317 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 else if (!context_.GetIndex().LookupResourceType(actualLevel, study) ||
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 actualLevel != ResourceType_Study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
322 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
323 "This resource is not a study: " + study);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
324 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
326 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
327 AddSourceStudyInternal(study);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
328 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
329 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
330
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
331
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332 void MergeStudyJob::SetKeepSource(bool keep)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
335 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
337 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
339 keepSource_ = keep;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
340 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
341
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
342
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
343 void MergeStudyJob::GetPublicContent(Json::Value& value)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
344 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
345 SetOfInstancesJob::GetPublicContent(value);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
346 value["TargetStudy"] = targetStudy_;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
347 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
348
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
349
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
350 static const char* KEEP_SOURCE = "KeepSource";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
351 static const char* TARGET_STUDY = "TargetStudy";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 static const char* REPLACEMENTS = "Replacements";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
353 static const char* REMOVALS = "Removals";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 static const char* SERIES_UID_MAP = "SeriesUIDMap";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 static const char* ORIGIN = "Origin";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
356
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 MergeStudyJob::MergeStudyJob(ServerContext& context,
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 const Json::Value& serialized) :
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 SetOfInstancesJob(serialized), // (*)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 context_(context)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 if (!HasTrailingStep())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 // Should have been set by (*)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 throw OrthancException(ErrorCode_InternalError);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
369 keepSource_ = SerializationToolbox::ReadBoolean(serialized, KEEP_SOURCE);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
370 targetStudy_ = SerializationToolbox::ReadString(serialized, TARGET_STUDY);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
371 SerializationToolbox::ReadMapOfTags(replacements_, serialized, REPLACEMENTS);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 SerializationToolbox::ReadSetOfTags(removals_, serialized, REMOVALS);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
373 SerializationToolbox::ReadMapOfStrings(seriesUidMap_, serialized, SERIES_UID_MAP);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
374 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
375 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
376
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
377
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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378 bool MergeStudyJob::Serialize(Json::Value& target)
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Sebastien Jodogne <s.jodogne@gmail.com>
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379 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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380 if (!SetOfInstancesJob::Serialize(target))
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Sebastien Jodogne <s.jodogne@gmail.com>
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381 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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382 return false;
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Sebastien Jodogne <s.jodogne@gmail.com>
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383 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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384 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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385 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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386 target[KEEP_SOURCE] = keepSource_;
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Sebastien Jodogne <s.jodogne@gmail.com>
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387 target[TARGET_STUDY] = targetStudy_;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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388 SerializationToolbox::WriteMapOfTags(target, replacements_, REPLACEMENTS);
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Sebastien Jodogne <s.jodogne@gmail.com>
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389 SerializationToolbox::WriteSetOfTags(target, removals_, REMOVALS);
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Sebastien Jodogne <s.jodogne@gmail.com>
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390 SerializationToolbox::WriteMapOfStrings(target, seriesUidMap_, SERIES_UID_MAP);
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Sebastien Jodogne <s.jodogne@gmail.com>
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391 origin_.Serialize(target[ORIGIN]);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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392
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Sebastien Jodogne <s.jodogne@gmail.com>
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393 return true;
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Sebastien Jodogne <s.jodogne@gmail.com>
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394 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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395 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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396 }