Mercurial > hg > orthanc

annotate OrthancServer/ServerJobs/SplitStudyJob.cpp @ 3084:195ba4cbac3f db-changes

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
reorganization
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 04 Jan 2019 16:42:55 +0100
parents 4e43e67f8ecf
children beeeb6096f27
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
3060
4e43e67f8ecf preparing for 2019
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU General Public License as
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * published by the Free Software Foundation, either version 3 of the
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * License, or (at your option) any later version.
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * In addition, as a special exception, the copyright holders of this
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * program give permission to link the code of its release with the
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * that use the same license as the "OpenSSL" library), and distribute
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 * the linked executables. You must obey the GNU General Public License
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * in all respects for all of the code used other than "OpenSSL". If you
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * modify file(s) with this exception, you may extend this exception to
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 * your version of the file(s), but you are not obligated to do so. If
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 * you do not wish to do so, delete this exception statement from your
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 * version. If you delete this exception statement from all source files
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 * in the program, then also delete it here.
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 *
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 * This program is distributed in the hope that it will be useful, but
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * WITHOUT ANY WARRANTY; without even the implied warranty of
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * General Public License for more details.
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 *
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 * You should have received a copy of the GNU General Public License
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 **/
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 #include "SplitStudyJob.h"
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
36 #include "../../Core/DicomParsing/FromDcmtkBridge.h"
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37 #include "../../Core/Logging.h"
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
38 #include "../../Core/SerializationToolbox.h"
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 namespace Orthanc
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42 void SplitStudyJob::CheckAllowedTag(const DicomTag& tag) const
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44 if (allowedTags_.find(tag) == allowedTags_.end())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
46 throw OrthancException(ErrorCode_ParameterOutOfRange,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
47 "Cannot modify the following tag while splitting a study "
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
48 "(not in the patient/study modules): " +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
49 FromDcmtkBridge::GetTagName(tag, "") +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
50 " (" + tag.Format() + ")");
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
55 void SplitStudyJob::Setup()
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57 SetPermissive(false);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 DicomTag::AddTagsForModule(allowedTags_, DicomModule_Patient);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 DicomTag::AddTagsForModule(allowedTags_, DicomModule_Study);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 allowedTags_.erase(DICOM_TAG_STUDY_INSTANCE_UID);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62 allowedTags_.erase(DICOM_TAG_SERIES_INSTANCE_UID);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
64
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
65
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
66 bool SplitStudyJob::HandleInstance(const std::string& instance)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
68 /**
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
69 * Retrieve the DICOM instance to be modified
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
70 **/
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
71
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
72 std::auto_ptr<ParsedDicomFile> modified;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 try
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76 ServerContext::DicomCacheLocker locker(context_, instance);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77 modified.reset(locker.GetDicom().Clone(true));
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
79 catch (OrthancException&)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
80 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 LOG(WARNING) << "An instance was removed after the job was issued: " << instance;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82 return false;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
83 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
84
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 /**
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 * Chose the target UIDs
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88 **/
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
89
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
90 assert(modified->GetHasher().HashStudy() == sourceStudy_);
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
91
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
92 std::string series = modified->GetHasher().HashSeries();
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
93
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
94 SeriesUidMap::const_iterator targetSeriesUid = seriesUidMap_.find(series);
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
95
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
96 if (targetSeriesUid == seriesUidMap_.end())
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
97 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
98 throw OrthancException(ErrorCode_BadFileFormat); // Should never happen
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
99 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
100
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
101
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
102 /**
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
103 * Apply user-specified modifications
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
104 **/
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
105
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
106 for (std::set<DicomTag>::const_iterator it = removals_.begin();
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
107 it != removals_.end(); ++it)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
108 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
109 modified->Remove(*it);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
110 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
111
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
112 for (Replacements::const_iterator it = replacements_.begin();
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
113 it != replacements_.end(); ++it)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
114 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
115 modified->ReplacePlainString(it->first, it->second);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
116 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
117
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
118
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
119 /**
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
120 * Store the new instance into Orthanc
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
121 **/
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
122
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
123 modified->ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, targetStudyUid_);
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
124 modified->ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, targetSeriesUid->second);
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
125
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
126 if (targetStudy_.empty())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
127 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
128 targetStudy_ = modified->GetHasher().HashStudy();
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
129 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
130
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
131 DicomInstanceToStore toStore;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
132 toStore.SetOrigin(origin_);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
133 toStore.SetParsedDicomFile(*modified);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
134
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
135 std::string modifiedInstance;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
136 if (context_.Store(modifiedInstance, toStore) != StoreStatus_Success)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
137 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
138 LOG(ERROR) << "Error while storing a modified instance " << instance;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
139 return false;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
140 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
141
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
142 return true;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
143 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
144
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
145
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
146 bool SplitStudyJob::HandleTrailingStep()
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
147 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
148 if (!keepSource_)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
149 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
150 const size_t n = GetInstancesCount();
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
151
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
152 for (size_t i = 0; i < n; i++)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
153 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
154 Json::Value tmp;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
155 context_.DeleteResource(tmp, GetInstance(i), ResourceType_Instance);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
156 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
157 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
158
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
159 return true;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
160 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
161
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
162
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
163 SplitStudyJob::SplitStudyJob(ServerContext& context,
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
164 const std::string& sourceStudy) :
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
165 context_(context),
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
166 keepSource_(false),
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
167 sourceStudy_(sourceStudy),
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
168 targetStudyUid_(FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Study))
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
169 {
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
170 Setup();
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
171
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
172 ResourceType type;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
173
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
174 if (!context_.GetIndex().LookupResourceType(type, sourceStudy) ||
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
175 type != ResourceType_Study)
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
176 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
177 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
178 "Cannot split unknown study " + sourceStudy);
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
179 }
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
180 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
181
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
182
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
183 void SplitStudyJob::SetOrigin(const DicomInstanceOrigin& origin)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
184 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
185 if (IsStarted())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
186 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
187 throw OrthancException(ErrorCode_BadSequenceOfCalls);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
188 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
189 else
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
190 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
191 origin_ = origin;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
192 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
193 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
194
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
195
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
196 void SplitStudyJob::SetOrigin(const RestApiCall& call)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
197 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
198 SetOrigin(DicomInstanceOrigin::FromRest(call));
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
199 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
200
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
201
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
202 void SplitStudyJob::AddSourceSeries(const std::string& series)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
203 {
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
204 std::string parent;
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
205
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
206 if (IsStarted())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
207 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
208 throw OrthancException(ErrorCode_BadSequenceOfCalls);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
209 }
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
210 else if (!context_.GetIndex().LookupParent(parent, series, ResourceType_Study) ||
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
211 parent != sourceStudy_)
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
212 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
213 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
214 "This series does not belong to the study to be split: " + series);
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
215 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
216 else
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
217 {
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
218 // Generate a target SeriesInstanceUID for this series
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
219 seriesUidMap_[series] = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Series);
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
220
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
221 // Add all the instances of the series as to be processed
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
222 std::list<std::string> instances;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
223 context_.GetIndex().GetChildren(instances, series);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
224
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
225 for (std::list<std::string>::const_iterator
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
226 it = instances.begin(); it != instances.end(); ++it)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
227 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
228 AddInstance(*it);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
229 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
230 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
231 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
232
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
233
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
234 void SplitStudyJob::SetKeepSource(bool keep)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
235 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
236 if (IsStarted())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
237 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
238 throw OrthancException(ErrorCode_BadSequenceOfCalls);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
239 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
240
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
241 keepSource_ = keep;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
242 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
243
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
244
2847
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
245 bool SplitStudyJob::LookupTargetSeriesUid(std::string& uid,
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
246 const std::string& series) const
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
247 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
248 SeriesUidMap::const_iterator found = seriesUidMap_.find(series);
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
249
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
250 if (found == seriesUidMap_.end())
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
251 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
252 return false;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
253 }
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
254 else
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
255 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
256 uid = found->second;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
257 return true;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
258 }
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
259 }
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
260
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
261
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262 void SplitStudyJob::Remove(const DicomTag& tag)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
263 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 if (IsStarted())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
265 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266 throw OrthancException(ErrorCode_BadSequenceOfCalls);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
268
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 CheckAllowedTag(tag);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270 removals_.insert(tag);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
273
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
274 void SplitStudyJob::Replace(const DicomTag& tag,
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275 const std::string& value)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277 if (IsStarted())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
279 throw OrthancException(ErrorCode_BadSequenceOfCalls);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
281
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
282 CheckAllowedTag(tag);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283 replacements_[tag] = value;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284 }
2847
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
285
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
286
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
287 bool SplitStudyJob::LookupReplacement(std::string& value,
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
288 const DicomTag& tag) const
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
289 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
290 Replacements::const_iterator found = replacements_.find(tag);
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
291
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
292 if (found == replacements_.end())
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
293 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
294 return false;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
295 }
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
296 else
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
297 {
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
298 value = found->second;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
299 return true;
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
300 }
2da68edacab6 unit testing of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2846
diff changeset
301 }
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
302
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
303
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304 void SplitStudyJob::GetPublicContent(Json::Value& value)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
305 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 SetOfInstancesJob::GetPublicContent(value);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
308 if (!targetStudy_.empty())
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
310 value["TargetStudy"] = targetStudy_;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
311 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
312
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
313 value["TargetStudyUID"] = targetStudyUid_;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314 }
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
315
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
316
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
317 static const char* KEEP_SOURCE = "KeepSource";
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
318 static const char* SOURCE_STUDY = "SourceStudy";
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
319 static const char* TARGET_STUDY = "TargetStudy";
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
320 static const char* TARGET_STUDY_UID = "TargetStudyUID";
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
321 static const char* SERIES_UID_MAP = "SeriesUIDMap";
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
322 static const char* ORIGIN = "Origin";
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
323 static const char* REPLACEMENTS = "Replacements";
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
324 static const char* REMOVALS = "Removals";
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
325
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
326
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
327 SplitStudyJob::SplitStudyJob(ServerContext& context,
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
328 const Json::Value& serialized) :
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
329 SetOfInstancesJob(serialized), // (*)
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
330 context_(context)
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
331 {
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
332 if (!HasTrailingStep())
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
333 {
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
334 // Should have been set by (*)
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
335 throw OrthancException(ErrorCode_InternalError);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
336 }
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
337
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
338 Setup();
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
339
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
340 keepSource_ = SerializationToolbox::ReadBoolean(serialized, KEEP_SOURCE);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
341 sourceStudy_ = SerializationToolbox::ReadString(serialized, SOURCE_STUDY);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
342 targetStudy_ = SerializationToolbox::ReadString(serialized, TARGET_STUDY);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
343 targetStudyUid_ = SerializationToolbox::ReadString(serialized, TARGET_STUDY_UID);
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
344 SerializationToolbox::ReadMapOfStrings(seriesUidMap_, serialized, SERIES_UID_MAP);
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
345 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
346 SerializationToolbox::ReadMapOfTags(replacements_, serialized, REPLACEMENTS);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
347 SerializationToolbox::ReadSetOfTags(removals_, serialized, REMOVALS);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
348 }
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
349
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
350
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
351 bool SplitStudyJob::Serialize(Json::Value& target)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 {
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
353 if (!SetOfInstancesJob::Serialize(target))
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
354 {
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
355 return false;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
356 }
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
357 else
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
358 {
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
359 target[KEEP_SOURCE] = keepSource_;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
360 target[SOURCE_STUDY] = sourceStudy_;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
361 target[TARGET_STUDY] = targetStudy_;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
362 target[TARGET_STUDY_UID] = targetStudyUid_;
2846
d386abc18133 simplification in SplitStudyJob, fix possible memory leak
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2845
diff changeset
363 SerializationToolbox::WriteMapOfStrings(target, seriesUidMap_, SERIES_UID_MAP);
2845
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
364 origin_.Serialize(target[ORIGIN]);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
365 SerializationToolbox::WriteMapOfTags(target, replacements_, REPLACEMENTS);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
366 SerializationToolbox::WriteSetOfTags(target, removals_, REMOVALS);
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
367
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
368 return true;
218e2c864d1d serialization of SplitStudyJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
369 }
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
370 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
371 }