Mercurial > hg > orthanc
annotate TODO @ 5403:05cb668c5f3f
fix to keep backward behaviour when exporting a series archive
| author | Alain Mazy <am@osimis.io> |
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| date | Tue, 17 Oct 2023 06:46:32 +0200 |
| parents | 54bed7c93d6a |
| children | 7bae5f7ebe6a |
| rev | line source |
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| 2163 | 1 ======================= |
| 2 === Orthanc Roadmap === | |
| 3 ======================= | |
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4 |
| 4707 | 5 For higher-level ideas in the roadmap, please first read the |
| 6 "Contributing to Orthanc" section of the Orthanc Book: | |
| 7 https://book.orthanc-server.com/contributing.html | |
| 8 | |
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9 |
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10 Some features are being funded by an OpenCollective one-time donations. |
| 4927 | 11 selected features are marked with priorities ((1) - higher, (2) - medium, (3) - nice to have) |
| 12 | |
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13 ======= |
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14 General |
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15 ======= |
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16 |
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17 * Configure an user-defined site UID root if generating DICOM UIDs |
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18 ("FromDcmtkBridge::GenerateUuid()") |
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19 * Improve handling of errors in the command queue: |
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20 https://groups.google.com/d/msg/orthanc-users/--njEbqcDDI/rBu8XL-Mm-cJ |
| 2178 | 21 * Support partial file retrieval in Orthanc::HttpClient |
| 22 * Support retry counter in Orthanc::HttpClient | |
| 4662 | 23 * Option to enable DNS lookups in DICOM: |
| 24 https://hg.orthanc-server.com/orthanc/file/Orthanc-1.9.3/OrthancFramework/Sources/OrthancFramework.cpp#l88 | |
| 4643 | 25 * Toolbox::ComputeMD5() fails on files larger than 4GB |
| 4841 | 26 * Add an option to run Orthanc in read-only mode both for DICOM and for Rest API. |
| 5166 | 27 * Logging: add some information like Thread-Id/job-id to contextualize the logs. |
| 28 For a DICOM Transfer, that would be nice to include the modality in the context + a study identifier or a job id. | |
| 4927 | 29 * (1) Accept extra DICOM tags dictionaries in the DCMTK format '.dic' (easier to use than declare |
| 4885 | 30 them in the Orthanc configuration file). Even the standard dictionaries could be |
| 31 overriden by these custom dictionaries. | |
| 4931 | 32 * Provide more flexibility wrt Dicom TLS ciphers and TLS version: |
| 4926 | 33 https://groups.google.com/g/orthanc-users/c/X4IhmXCSr7I/m/EirawAFcBwAJ |
| 5010 | 34 Can maybe be achieved by adding a configuration to select the TLS Security Profile: |
| 35 https://github.com/DCMTK/dcmtk/blob/master/dcmtls/include/dcmtk/dcmtls/tlsciphr.h#L83 | |
| 36 (e.g: TSP_Profile_BCP195_ND instead of TSP_Profile_BCP195) | |
| 5013 | 37 * Add configurations to enable/disable warnings: |
| 38 - Modifying an instance while keeping its original SOPInstanceUID: This should be avoided! | |
| 5034 | 39 - Modifying a study while keeping its original StudyInstanceUID: This should be avoided! |
| 5391 | 40 * Store the job registry in a dedicatd table in DB ? |
| 41 https://discourse.orthanc-server.org/t/performance-issue-when-adding-a-lot-of-jobs-in-the-queue/3915/2 | |
| 42 Note: that might also be the right time to have a central jobs registry when working | |
| 43 with multiple Orthanc instances on the same DB. | |
| 5400 | 44 * Right now, some Stable events never occurs (e.g. when Orthanc is restarted before the event is triggered). |
| 45 Since these events are used to e.g. generate dicom-web cache (or update it !), we should try | |
| 46 to make sure these events always happen. | |
| 47 - Generate the events when setting IsStable=true when starting an Orthanc (ok for SQLite) ? | |
| 48 - Also consider the use case of an Orthanc cluster that is being scaled-down just after one Orthanc instance | |
| 49 has received a few instances -> we can not only check for missing stable events at startup since no Orthanc will start. | |
| 50 We would need to maintain the list of "unstable" resources in DB instead of memory only. | |
| 51 * In prometheus metrics, implement Histograms or Exponential Histograms to measure durations. Right now, we only provide | |
| 52 "average" durations that are not very relevant | |
| 53 (https://opentelemetry.io/docs/specs/otel/metrics/data-model/#histogram) | |
| 54 - for job durations (+ have one histogram for each job) | |
| 55 - for HTTP request handling | |
| 56 - ... | |
| 4643 | 57 |
| 58 ============================ | |
| 59 Documentation (Orthanc Book) | |
| 60 ============================ | |
| 61 | |
| 4928 | 62 * Write a getting started guide (step by step) for each platform to replace |
| 63 https://book.orthanc-server.com/users/cookbook.html : | |
| 64 - Ubuntu/Debian | |
| 65 - Windows | |
| 66 - OSX | |
| 67 - Docker on Linux | |
| 68 Each step by step guide should contain: | |
| 69 - get binaries | |
| 70 - launch | |
| 71 - open explorer | |
| 72 - edit configuration file | |
| 73 - restart and observe changes | |
| 74 | |
| 4645 | 75 * Explain how log rotation can be achieved (no built-in support in Orthanc) |
| 76 * Explain how to interface with Mirth/NextGen Connect | |
| 77 https://en.wikipedia.org/wiki/NextGen_Connect | |
| 78 * How to reproduce issues by replacing Orthanc with storescp or wlmscpfs | |
| 79 * How to capture TCP traffic of DICOM protocol using tcpdump and Wireshark | |
| 80 * Add more configurations of viewers (Weasis, Slicer...): | |
| 81 https://book.orthanc-server.com/integrations.html | |
| 4648 | 82 * Discuss HL7 in a dedicated page: |
| 83 https://groups.google.com/d/msg/orthanc-users/4dt4992O0lQ/opTjTFU2BgAJ | |
| 4728 | 84 https://groups.google.com/g/orthanc-users/c/Spjtcj9vSPo/m/ktUArWxUDQAJ |
| 4812 | 85 |
| 86 | |
| 87 ================ | |
| 88 Orthanc Explorer | |
| 89 ================ | |
| 90 | |
| 91 * Option to tune the number of results for a local lookup: | |
| 92 https://groups.google.com/g/orthanc-users/c/LF39musq02Y/ | |
| 93 | |
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94 |
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95 ======== |
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96 REST API |
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97 ======== |
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98 |
| 5014 | 99 ---------- |
| 100 Short-term | |
| 101 ---------- | |
| 102 | |
| 103 | |
| 3967 | 104 -------- |
| 105 Mid-term | |
| 106 -------- | |
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107 |
| 4927 | 108 * (1) Archive jobs: Resume downloads using "range requests": |
| 4478 | 109 https://developer.mozilla.org/en-US/docs/Web/HTTP/Range_requests |
| 4927 | 110 * (3) Create DICOM from DICOMweb JSON ("application/dicom+json") |
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111 with "/tools/create-dicom" |
| 4927 | 112 * (2) Create multi-frame images with /tools/create-dicom (by adding a |
| 4644 | 113 "MultiFrame" flag to avoid creating a series), or modify PixelData |
| 114 of a multi-frame image: | |
| 115 https://groups.google.com/g/orthanc-users/c/y3-xa_GcdLM/m/m0Kr5G5UPAAJ | |
| 4927 | 116 * (1) Specify the transfer syntax in /tools/create-dicom |
| 5055 | 117 https://groups.google.com/g/orthanc-users/c/o15Dekecgds/m/xmPE2y3bAwAJ |
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118 * Support Palette PNG in /tools/create-dicom: |
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119 https://discourse.orthanc-server.org/t/404-on-tools-create-dicom-endpoint-with-specific-png/3562 |
| 4927 | 120 * (1) In the /studies/{id}/anonymize route, add an option to remove |
| 4478 | 121 secondary captures. They usually contains Patient info in the |
| 122 image. The SOPClassUID might be used to identify such secondary | |
| 123 captures. | |
| 124 * Support "/preview" and "/matlab" for LUT color images | |
| 4803 | 125 * Try to transcode files if a simple decoding fails: |
| 126 https://groups.google.com/g/orthanc-users/c/b8168-NkAhA/m/Df3j-CO9CgAJ | |
| 4927 | 127 * (2) Ranges of DICOM tags for "Keep" and "Remove" in ".../modify" and ".../anonymize": |
| 4644 | 128 https://groups.google.com/g/orthanc-users/c/6dETktKo9v8/m/b0LUvSfwAgAJ |
| 5006 | 129 * return error code/reason in HTTP response if resubmit/cancel/pause fails ... |
| 5008 | 130 * filter /changes by type e.g: /changes?filter=StablePatient |
| 131 https://groups.google.com/g/orthanc-users/c/r20kDb0axms/m/2tzbQzYJAgAJ | |
| 132 * save more details in jobs e.g: the resources being sent/exported ... | |
| 133 https://groups.google.com/g/orthanc-users/c/rDDusFG5Lco/m/TzTUjWXLAQAJ | |
| 5386 | 134 https://discourse.orthanc-server.org/t/some-confusion-about-jobs-function/3887 |
| 5133 | 135 * allow filtering/ordering on the /jobs route: |
| 136 https://groups.google.com/g/orthanc-users/c/hsZ1jng5rIg/m/8xZL2C1VBgAJ | |
| 5367 | 137 * add an "AutoDeleteIfSuccessful": false option when creating jobs |
| 138 https://discourse.orthanc-server.org/t/job-history-combined-with-auto-forwarding/3729/10 | |
| 5208 | 139 * Also implement a GET variant of /tools/create-archive + sibling routes |
| 140 in which resources & transcode options are provided as get arguments. | |
| 141 https://groups.google.com/g/orthanc-users/c/PmaRZ609ztA/m/JdwXvIBKAQAJ | |
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142 * Allow skiping automatic conversion of color-space in transcoding/decoding. |
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143 The patch that was initialy provided was breaking the IngestTranscoding. |
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144 https://discourse.orthanc-server.org/t/orthanc-convert-ybr-to-rgb-but-does-not-change-metadata/3533/9 |
| 5382 | 145 * Implement a 'commit' route to force the Stable status earlier. |
| 146 https://discourse.orthanc-server.org/t/expediting-stability-of-a-dicom-study-new-api-endpoint/1684 | |
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147 |
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148 --------- |
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149 Long-term |
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150 --------- |
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151 |
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152 * Stick to the JSONapi or JAREST guidelines for a "v2" of the API: |
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153 https://groups.google.com/forum/#!msg/orthanc-users/Bag-SwEE9ZI/-w7QXI6p7-oJ |
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154 http://www.admiraalit.nl/jarest/ |
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155 |
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156 |
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157 ===== |
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158 DICOM |
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159 ===== |
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160 |
| 3383 | 161 -------- |
| 162 Mid-term | |
| 163 -------- | |
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164 |
| 4452 | 165 * Support C-GET SCU (note that C-GET SCP was introduced in Orthanc 1.7.0) |
| 3335 | 166 * Support "Retrieve AE Title" (0008,0054) in C-FIND: |
| 4144 | 167 - On SCP side: done by https://hg.orthanc-server.com/orthanc/rev/1ec3e1e18f50 |
| 3472 | 168 - On SCU side: |
| 169 https://groups.google.com/d/msg/orthanc-users/wPl0g5mqZco/5X1Z8tEzBgAJ | |
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170 * Check Big Endian transfer syntax in ParsedDicomFile::EmbedImage and |
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171 DicomImageDecoder |
| 3384 | 172 * Strict hierarchical C-FIND: |
| 173 https://groups.google.com/d/msg/orthanc-users/VBHpeGVSNKM/tkaVvjWFBwAJ | |
| 4986 | 174 * report DIMSE error codes in Rest API and job status for /store /query /move /retrieve |
| 5114 | 175 * report progress report of C-Move operation in jop progress. There are |
| 176 progress callbacks available in DIMSE_moveUser | |
| 177 https://groups.google.com/g/orthanc-users/c/c8cGnA7FzsE/m/BSs66D8wBwAJ | |
| 4986 | 178 * Log outgoing C-Find queries |
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179 |
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180 --------- |
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181 Long-term |
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182 --------- |
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183 |
| 4885 | 184 * Support extended association (e.g. for C-Find relational queries): |
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185 https://groups.google.com/d/msg/orthanc-users/xD4d3mpc6ms/srF7E2goAAAJ |
| 3465 | 186 * Support C-MOVE-CANCEL: |
| 187 https://groups.google.com/d/msg/orthanc-users/KnduYBFd06A/o86cl5SeCAAJ | |
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188 |
| 3967 | 189 -------------------- |
| 190 Internationalization | |
| 191 -------------------- | |
| 3218 | 192 |
| 193 * Support multiple specific character sets (cf. "SCSH32" in orthanc-tests) | |
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194 - http://dicom.nema.org/medical/dicom/current/output/chtml/part03/sect_C.12.html#sect_C.12.1.1.2 |
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195 - Japanese test: http://dicom.nema.org/MEDICAL/dicom/2017c/output/chtml/part05/sect_H.3.2.html |
| 5385 | 196 https://discourse.orthanc-server.org/t/garbled-characters-when-i-uploaded-japanese-patient-name/3204/5 |
| 3218 | 197 * Support Supplementary Kanji set (ISO 2022 IR 159) |
| 3261 | 198 * Create DICOM files with multibyte encodings (Korean, JapaneseKanji, SimplifiedChinese) |
| 3218 | 199 |
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200 |
| 4467 | 201 =========== |
| 202 Performance | |
| 203 =========== | |
| 204 | |
| 4927 | 205 * (3) ServerContext::DicomCacheLocker => give access to the raw buffer, |
| 4467 | 206 useful in ServerContext::DecodeDicomInstance() |
| 4927 | 207 * (2) DicomMap: create a cache to the main DICOM tags index |
| 208 * (3) Check out rapidjson: https://github.com/miloyip/nativejson-benchmark | |
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209 * For C-Find results: we could store the computed tags |
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210 in metadata on some events like NewSeries + DeletedSeries (same for other computer tags). |
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211 OtherTags that could be saved in Metadata as well: |
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212 - ModalitiesInStudy |
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213 - all computed counters at series/study/patient level |
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214 - RequestAttributesSequence (sequence that must be included in all DicomWeb QIDO-RS for series) |
| 4467 | 215 |
| 4986 | 216 * Long-shot & not sure it is even feasible at all: try to reduce memory usage by implementing streaming |
| 217 when receiving DICOM instances from the Rest API or from DICOM and store files directly to disk as they | |
| 218 are received. Note that this would likely require rewriting large parts of Orthanc. Note sure that | |
| 219 would be compatible with Transcoding. | |
| 220 Use case: receiving 10 1GB instances in parallel can consume up to 20 GB | |
| 221 Alternative option 1: write an "external application/plugin" that would take care of these receptions, write the | |
| 5096 | 222 file at the right place and send a signal to Orthanc to "adopt" the file. |
| 4986 | 223 Alternative option 2: declare a memory resource (X GB) that is available for reception. Every time |
| 5096 | 224 Orthanc starts receiving a file, it reserves the memory or twice the memory (through a Semaphore) |
| 225 if no memory is available, it waits and possibly timeouts returning a 503 or DIMSE A700 (out of resources). | |
| 226 This would at least protect from "out of memory" crashes. | |
| 227 Alternative option 3: Configure DCMTK to "stream" DICOM files on a temporary file on disk. Pass the file handle | |
| 228 to Orthanc and/or the Storage plugin (instead of passing a memory buffer) -> the object-storage plugin could | |
| 229 "stream" the file to the storage. The HTTP server could also "stream" its response from file handles. | |
| 230 Transcoding should be "file based" too. | |
| 4986 | 231 |
| 232 | |
| 4624 | 233 ======== |
| 234 Database | |
| 235 ======== | |
| 236 | |
| 237 * Integration test searching for "\" and "%" in PatientName, PatientID... | |
| 238 | |
| 239 | |
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240 ======= |
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241 Plugins |
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242 ======= |
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243 |
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244 --- |
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245 SDK |
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246 --- |
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247 |
| 4212 | 248 * Implement PluginsJob::GetOutput() to allow user-defined jobs to provide output: |
| 249 https://groups.google.com/g/orthanc-users/c/GZ7u0bTTVoo/m/Z7iTNTi2BgAJ | |
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250 * Add plugins for normalized operations (notably so as to support |
| 4645 | 251 Print SCU/SCP, cf. "dcmprscp"): |
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252 https://web.archive.org/web/20170923150432/https://www.medicalconnections.co.uk/kb/DICOM_Print_Service |
| 3153 | 253 * Provide access to the Orthanc::DicomUserConnection class in plugins: |
| 254 https://groups.google.com/d/msg/orthanc-users/ycDA1xPuTRY/nsT2_GOtEgAJ | |
| 3390 | 255 * Provide a C++ callback similar to "ReceivedInstanceFilter()" in Lua |
| 256 https://book.orthanc-server.com/users/lua.html#filtering-incoming-dicom-instances | |
| 257 https://groups.google.com/d/msg/orthanc-users/BtvLTE5Ni8A/vIMhmMgfBAAJ | |
| 4645 | 258 * In "OrthancPluginLog[Error|Warning|Info]()", prefix the log line with |
| 259 the name of the plugin, as retrieved by "OrthancPluginGetName()" | |
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260 * Update the SDK to handle buffer sizes > 4GB (all sizes are currently coded in uint32_t) |
| 5106 | 261 * Add a C-Get SCP handler: OrthancPluginRegisterGetCallback |
| 5107 | 262 https://groups.google.com/g/orthanc-users/c/NRhPkYX9IXQ/m/mWS11g0jBwAJ |
| 5165 | 263 * Add a primitive for user authentication (to generate 401 HTTP status, whereas |
| 264 the "RegisterIncomingHttpRequestFilter()" can only generate 403 HTTP status) | |
| 265 https://groups.google.com/g/orthanc-users/c/ymtaAmgSs6Q/m/PqVBactQAQAJ | |
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266 |
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267 ---------------- |
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268 Ideas of plugins |
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269 ---------------- |
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270 |
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271 * DICOM-RT primitives (RT-STRUCT, RT-PLAN, RT-DOSE) |
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272 * Converter to/from NIfTI |
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273 * Decode JPEG2k with grok: https://github.com/GrokImageCompression/grok |
| 2251 | 274 * Generate dynamic HTTP content using Lua: |
| 2199 | 275 https://groups.google.com/d/msg/orthanc-users/KompazkxRSs/5Rh03mzgDAAJ |
| 2251 | 276 * More generally, expose more callbacks of the plugin SDK in Lua: |
| 277 https://groups.google.com/d/msg/orthanc-users/_FbiRHuXPGM/J-OAv7zaCAAJ | |
| 3300 | 278 * Configuration interface plugin |
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279 |
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280 |
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281 === |
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282 Lua |
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283 === |
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284 |
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285 * Configure HTTP headers from Lua (in RestApiPost(), RestApiPut() |
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286 and RestApiDelete(). |
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287 https://groups.google.com/forum/#!msg/orthanc-users/WNnW187OILM/6XX_bm96BwAJ |
| 5387 | 288 * Retrieve HTTP status from calls to HttpGet, HttpPost, ... |
| 289 https://discourse.orthanc-server.org/t/how-to-get-http-status-code-from-httppost/1263/4 | |
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290 |
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291 |
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292 ================ |
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293 Code refactoring |
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294 ================ |
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295 |
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296 * Avoid direct calls to FromDcmtkBridge (make most of its |
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297 methods private), go through ParsedDicomFile wherever possible |
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298 |
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299 |
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300 ================= |
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301 Platform-specific |
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302 ================= |
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303 |
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304 --------- |
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305 Packaging |
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306 --------- |
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307 |
| 4467 | 308 * RHEL through EPEL (as of 2021, CentOS seems to be over): |
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309 http://fedoraproject.org/wiki/EPEL_Package_Maintainers |
| 4643 | 310 * Fedora: Are DICOM dictionaries correctly located? |
| 311 https://groups.google.com/g/orthanc-users/c/YB_LTBuUQNA/m/3H1xsrZJDgAJ | |
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312 |
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313 ------------------------ |
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314 Big-endian architectures |
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315 ------------------------ |
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316 |
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317 * Check the generated 16bpp PNG images |
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318 |
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319 ----------------- |
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320 Microsoft Windows |
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321 ----------------- |
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322 |
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323 * Add compatibility with non-ASCII paths (Orthanc expresses its paths |
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324 as UTF-8 strings, but Windows expects them to be translated to the |
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325 system locale) |
| 5053 | 326 * Fix error message when stopping the service: |
| 327 https://groups.google.com/g/orthanc-users/c/NyrwUJ9N6Ec/m/sTZIcWvaAgAJ | |
| 328 | |
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329 |
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330 ==== |
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331 Misc |
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332 ==== |
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333 |
| 4643 | 334 ----------------- |
| 335 Maintenance tools | |
| 336 ----------------- | |
| 337 | |
| 338 * Standalone tool to detect corrupted files: | |
| 339 https://groups.google.com/g/orthanc-users/c/KASEJ9Gx3vQ/m/MIJFJdRhAwAJ | |
| 340 * Standalone tool to detect orphan files in OrthancStorage | |
| 341 | |
| 342 ---------------------------------- | |
| 343 Code quality and integration tests | |
| 344 ---------------------------------- | |
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345 |
| 4467 | 346 * Have a look at openQA (cf. GNU Health) |
| 4643 | 347 * Add integration tests for LUT |
| 4926 | 348 * Add more complex testing scenarios like data-migration, change of |
| 349 configuration files, multiple orthanc interacting togethers with various | |
| 350 config. This should probably look like the python toolbox tests ... | |
| 5304 | 351 - add a test to validate Modalities and Peers stored in DB are not lost |
| 352 while upgrading from one version to the other (Sylvain) | |
| 5349 | 353 * On Ubuntu 20.04, accesses to unitialized memory are sometimes |
| 354 reported in libgjpeg by valgrind, if running the following command | |
| 355 (this is probably unrelated to Orthanc): | |
| 356 $ ./Start.sh --force Orthanc.test_bitbucket_issue_141 Orthanc.test_create_pdf Orthanc.test_decode_brainix_as_jpeg | |
| 4926 | 357 |
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358 |
| 4467 | 359 --------------------- |
| 360 External applications | |
| 361 --------------------- | |
| 362 | |
| 363 * Create REST bindings with Slicer | |
| 364 * Create REST bindings with Horos/OsiriX |