Mercurial > hg > orthanc
annotate OrthancServer/OrthancInitialization.cpp @ 847:03ea55da7429 jpeg
fully functional JPEG-LS conversion
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 05 Jun 2014 18:14:16 +0200 |
parents | 84513f2ee1f3 |
children | b3f6fb1130cd |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
689 | 3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, |
0 | 4 * Belgium |
5 * | |
6 * This program is free software: you can redistribute it and/or | |
7 * modify it under the terms of the GNU General Public License as | |
8 * published by the Free Software Foundation, either version 3 of the | |
9 * License, or (at your option) any later version. | |
136 | 10 * |
11 * In addition, as a special exception, the copyright holders of this | |
12 * program give permission to link the code of its release with the | |
13 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
14 * that use the same license as the "OpenSSL" library), and distribute | |
15 * the linked executables. You must obey the GNU General Public License | |
16 * in all respects for all of the code used other than "OpenSSL". If you | |
17 * modify file(s) with this exception, you may extend this exception to | |
18 * your version of the file(s), but you are not obligated to do so. If | |
19 * you do not wish to do so, delete this exception statement from your | |
20 * version. If you delete this exception statement from all source files | |
21 * in the program, then also delete it here. | |
0 | 22 * |
23 * This program is distributed in the hope that it will be useful, but | |
24 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
26 * General Public License for more details. | |
27 * | |
28 * You should have received a copy of the GNU General Public License | |
29 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
30 **/ | |
31 | |
32 | |
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33 #include "PrecompiledHeadersServer.h" |
62 | 34 #include "OrthancInitialization.h" |
0 | 35 |
476 | 36 #include "../Core/HttpClient.h" |
62 | 37 #include "../Core/OrthancException.h" |
0 | 38 #include "../Core/Toolbox.h" |
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39 #include "DicomProtocol/DicomServer.h" |
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40 #include "ServerEnumerations.h" |
0 | 41 |
42 #include <boost/lexical_cast.hpp> | |
43 #include <boost/filesystem.hpp> | |
44 #include <curl/curl.h> | |
45 #include <boost/thread.hpp> | |
108 | 46 #include <glog/logging.h> |
0 | 47 |
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48 |
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49 #if ORTHANC_JPEG_ENABLED == 1 |
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50 #include <dcmtk/dcmjpeg/djdecode.h> |
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51 #endif |
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52 |
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53 |
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54 #if ORTHANC_JPEG_LOSSLESS_ENABLED == 1 |
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55 #include <dcmtk/dcmjpls/djdecode.h> |
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56 #endif |
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57 |
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58 |
62 | 59 namespace Orthanc |
0 | 60 { |
61 static boost::mutex globalMutex_; | |
62 static std::auto_ptr<Json::Value> configuration_; | |
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63 static boost::filesystem::path defaultDirectory_; |
0 | 64 |
806 | 65 |
0 | 66 static void ReadGlobalConfiguration(const char* configurationFile) |
67 { | |
68 configuration_.reset(new Json::Value); | |
69 | |
70 std::string content; | |
71 | |
72 if (configurationFile) | |
73 { | |
74 Toolbox::ReadFile(content, configurationFile); | |
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75 defaultDirectory_ = boost::filesystem::path(configurationFile).parent_path(); |
660 | 76 LOG(WARNING) << "Using the configuration from: " << configurationFile; |
0 | 77 } |
78 else | |
79 { | |
660 | 80 #if ORTHANC_STANDALONE == 1 |
81 // No default path for the standalone configuration | |
82 LOG(WARNING) << "Using the default Orthanc configuration"; | |
83 return; | |
84 | |
85 #else | |
86 // In a non-standalone build, we use the | |
87 // "Resources/Configuration.json" from the Orthanc source code | |
88 | |
19 | 89 try |
90 { | |
660 | 91 boost::filesystem::path p = ORTHANC_PATH; |
92 p /= "Resources"; | |
93 p /= "Configuration.json"; | |
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94 Toolbox::ReadFile(content, p.string()); |
660 | 95 LOG(WARNING) << "Using the configuration from: " << p.string(); |
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96 } |
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97 catch (OrthancException&) |
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98 { |
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99 // No configuration file found, give up with empty configuration |
660 | 100 LOG(WARNING) << "Using the default Orthanc configuration"; |
19 | 101 return; |
102 } | |
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103 #endif |
0 | 104 } |
105 | |
106 Json::Reader reader; | |
107 if (!reader.parse(content, *configuration_)) | |
108 { | |
62 | 109 throw OrthancException("Unable to read the configuration file"); |
0 | 110 } |
111 } | |
112 | |
113 | |
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114 static void RegisterUserMetadata() |
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115 { |
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116 if (configuration_->isMember("UserMetadata")) |
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117 { |
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118 const Json::Value& parameter = (*configuration_) ["UserMetadata"]; |
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119 |
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120 Json::Value::Members members = parameter.getMemberNames(); |
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121 for (size_t i = 0; i < members.size(); i++) |
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122 { |
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123 std::string info = "\"" + members[i] + "\" = " + parameter[members[i]].toStyledString(); |
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124 LOG(INFO) << "Registering user-defined metadata: " << info; |
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125 |
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126 if (!parameter[members[i]].asBool()) |
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127 { |
439 | 128 LOG(ERROR) << "Not a number in this user-defined metadata: " << info; |
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129 throw OrthancException(ErrorCode_BadParameterType); |
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130 } |
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131 |
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132 int metadata = parameter[members[i]].asInt(); |
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133 |
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134 try |
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135 { |
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136 RegisterUserMetadata(metadata, members[i]); |
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137 } |
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138 catch (OrthancException&) |
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139 { |
439 | 140 LOG(ERROR) << "Cannot register this user-defined metadata: " << info; |
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141 throw; |
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142 } |
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143 } |
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144 } |
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145 } |
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146 |
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147 |
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148 static void RegisterUserContentType() |
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149 { |
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150 if (configuration_->isMember("UserContentType")) |
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151 { |
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152 const Json::Value& parameter = (*configuration_) ["UserContentType"]; |
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153 |
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154 Json::Value::Members members = parameter.getMemberNames(); |
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155 for (size_t i = 0; i < members.size(); i++) |
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156 { |
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157 std::string info = "\"" + members[i] + "\" = " + parameter[members[i]].toStyledString(); |
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158 LOG(INFO) << "Registering user-defined attachment type: " << info; |
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159 |
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160 if (!parameter[members[i]].asBool()) |
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161 { |
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162 LOG(ERROR) << "Not a number in this user-defined attachment type: " << info; |
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163 throw OrthancException(ErrorCode_BadParameterType); |
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164 } |
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165 |
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166 int contentType = parameter[members[i]].asInt(); |
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167 |
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168 try |
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169 { |
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170 RegisterUserContentType(contentType, members[i]); |
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171 } |
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172 catch (OrthancException&) |
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173 { |
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174 LOG(ERROR) << "Cannot register this user-defined attachment type: " << info; |
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175 throw; |
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176 } |
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177 } |
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178 } |
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179 } |
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180 |
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181 |
62 | 182 void OrthancInitialize(const char* configurationFile) |
0 | 183 { |
184 boost::mutex::scoped_lock lock(globalMutex_); | |
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185 |
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186 InitializeServerEnumerations(); |
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187 defaultDirectory_ = boost::filesystem::current_path(); |
0 | 188 ReadGlobalConfiguration(configurationFile); |
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189 |
457 | 190 HttpClient::GlobalInitialize(); |
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191 |
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192 RegisterUserMetadata(); |
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193 RegisterUserContentType(); |
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195 DicomServer::InitializeDictionary(); |
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196 |
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197 #if ORTHANC_JPEG_LOSSLESS_ENABLED == 1 |
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198 LOG(WARNING) << "Registering JPEG Lossless codecs"; |
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199 DJLSDecoderRegistration::registerCodecs(); |
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200 #endif |
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201 |
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202 #if ORTHANC_JPEG_ENABLED == 1 |
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203 LOG(WARNING) << "Registering JPEG codecs"; |
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204 DJDecoderRegistration::registerCodecs(); |
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205 #endif |
0 | 206 } |
207 | |
208 | |
209 | |
62 | 210 void OrthancFinalize() |
0 | 211 { |
212 boost::mutex::scoped_lock lock(globalMutex_); | |
457 | 213 HttpClient::GlobalFinalize(); |
0 | 214 configuration_.reset(NULL); |
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215 |
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216 #if ORTHANC_JPEG_LOSSLESS_ENABLED == 1 |
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217 // Unregister JPEG-LS codecs |
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218 DJLSDecoderRegistration::cleanup(); |
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219 #endif |
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220 |
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221 #if ORTHANC_JPEG_ENABLED == 1 |
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222 // Unregister JPEG codecs |
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223 DJDecoderRegistration::cleanup(); |
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224 #endif |
0 | 225 } |
226 | |
227 | |
228 | |
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229 std::string Configuration::GetGlobalStringParameter(const std::string& parameter, |
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230 const std::string& defaultValue) |
0 | 231 { |
232 boost::mutex::scoped_lock lock(globalMutex_); | |
233 | |
234 if (configuration_->isMember(parameter)) | |
235 { | |
236 return (*configuration_) [parameter].asString(); | |
237 } | |
238 else | |
239 { | |
240 return defaultValue; | |
241 } | |
242 } | |
243 | |
244 | |
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245 int Configuration::GetGlobalIntegerParameter(const std::string& parameter, |
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246 int defaultValue) |
0 | 247 { |
248 boost::mutex::scoped_lock lock(globalMutex_); | |
249 | |
250 if (configuration_->isMember(parameter)) | |
251 { | |
252 return (*configuration_) [parameter].asInt(); | |
253 } | |
254 else | |
255 { | |
256 return defaultValue; | |
257 } | |
258 } | |
259 | |
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260 |
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261 bool Configuration::GetGlobalBoolParameter(const std::string& parameter, |
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262 bool defaultValue) |
23 | 263 { |
264 boost::mutex::scoped_lock lock(globalMutex_); | |
265 | |
266 if (configuration_->isMember(parameter)) | |
267 { | |
268 return (*configuration_) [parameter].asBool(); | |
269 } | |
270 else | |
271 { | |
272 return defaultValue; | |
273 } | |
274 } | |
275 | |
276 | |
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277 void Configuration::GetDicomModalityUsingSymbolicName(RemoteModalityParameters& modality, |
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278 const std::string& name) |
0 | 279 { |
280 boost::mutex::scoped_lock lock(globalMutex_); | |
281 | |
282 if (!configuration_->isMember("DicomModalities")) | |
283 { | |
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284 throw OrthancException(ErrorCode_BadFileFormat); |
0 | 285 } |
286 | |
287 const Json::Value& modalities = (*configuration_) ["DicomModalities"]; | |
288 if (modalities.type() != Json::objectValue || | |
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289 !modalities.isMember(name)) |
0 | 290 { |
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291 throw OrthancException(ErrorCode_BadFileFormat); |
0 | 292 } |
293 | |
294 try | |
295 { | |
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296 modality.FromJson(modalities[name]); |
0 | 297 } |
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298 catch (OrthancException& e) |
0 | 299 { |
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300 LOG(ERROR) << "Syntax error in the definition of modality \"" << name |
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301 << "\". Please check your configuration file."; |
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302 throw e; |
0 | 303 } |
304 } | |
305 | |
306 | |
307 | |
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308 void Configuration::GetOrthancPeer(OrthancPeerParameters& peer, |
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309 const std::string& name) |
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310 { |
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311 boost::mutex::scoped_lock lock(globalMutex_); |
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312 |
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313 if (!configuration_->isMember("OrthancPeers")) |
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314 { |
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315 throw OrthancException(ErrorCode_BadFileFormat); |
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316 } |
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317 |
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318 try |
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319 { |
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320 const Json::Value& modalities = (*configuration_) ["OrthancPeers"]; |
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321 if (modalities.type() != Json::objectValue || |
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322 !modalities.isMember(name)) |
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323 { |
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324 throw OrthancException(ErrorCode_BadFileFormat); |
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325 } |
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326 |
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327 peer.FromJson(modalities[name]); |
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328 } |
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329 catch (OrthancException& e) |
485
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330 { |
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331 LOG(ERROR) << "Syntax error in the definition of peer \"" << name |
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332 << "\". Please check your configuration file."; |
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333 throw e; |
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334 } |
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335 } |
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336 |
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337 |
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338 static bool ReadKeys(std::set<std::string>& target, |
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339 const char* parameter, |
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340 bool onlyAlphanumeric) |
0 | 341 { |
342 boost::mutex::scoped_lock lock(globalMutex_); | |
343 | |
344 target.clear(); | |
345 | |
484
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346 if (!configuration_->isMember(parameter)) |
0 | 347 { |
484
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348 return true; |
0 | 349 } |
350 | |
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351 const Json::Value& modalities = (*configuration_) [parameter]; |
0 | 352 if (modalities.type() != Json::objectValue) |
353 { | |
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354 throw OrthancException(ErrorCode_BadFileFormat); |
0 | 355 } |
356 | |
357 Json::Value::Members members = modalities.getMemberNames(); | |
358 for (size_t i = 0; i < members.size(); i++) | |
359 { | |
484
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360 if (onlyAlphanumeric) |
0 | 361 { |
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362 for (size_t j = 0; j < members[i].size(); j++) |
0 | 363 { |
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364 if (!isalnum(members[i][j]) && members[i][j] != '-') |
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365 { |
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366 return false; |
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367 } |
0 | 368 } |
369 } | |
370 | |
371 target.insert(members[i]); | |
372 } | |
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373 |
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374 return true; |
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375 } |
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376 |
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377 |
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378 void Configuration::GetListOfDicomModalities(std::set<std::string>& target) |
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379 { |
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380 if (!ReadKeys(target, "DicomModalities", true)) |
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381 { |
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382 throw OrthancException("Only alphanumeric and dash characters are allowed in the names of the modalities"); |
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383 } |
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384 } |
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385 |
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386 |
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387 void Configuration::GetListOfOrthancPeers(std::set<std::string>& target) |
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388 { |
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389 if (!ReadKeys(target, "OrthancPeers", true)) |
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390 { |
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391 throw OrthancException("Only alphanumeric and dash characters are allowed in the names of Orthanc peers"); |
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392 } |
0 | 393 } |
25
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394 |
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395 |
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396 |
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397 void Configuration::SetupRegisteredUsers(MongooseServer& httpServer) |
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398 { |
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399 boost::mutex::scoped_lock lock(globalMutex_); |
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400 |
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401 httpServer.ClearUsers(); |
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402 |
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403 if (!configuration_->isMember("RegisteredUsers")) |
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404 { |
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405 return; |
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406 } |
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407 |
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408 const Json::Value& users = (*configuration_) ["RegisteredUsers"]; |
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409 if (users.type() != Json::objectValue) |
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410 { |
62 | 411 throw OrthancException("Badly formatted list of users"); |
25
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412 } |
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413 |
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414 Json::Value::Members usernames = users.getMemberNames(); |
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415 for (size_t i = 0; i < usernames.size(); i++) |
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416 { |
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417 const std::string& username = usernames[i]; |
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418 std::string password = users[username].asString(); |
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419 httpServer.RegisterUser(username.c_str(), password.c_str()); |
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420 } |
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421 } |
394
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422 |
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423 |
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424 std::string Configuration::InterpretRelativePath(const std::string& baseDirectory, |
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425 const std::string& relativePath) |
394
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426 { |
429
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427 boost::filesystem::path base(baseDirectory); |
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428 boost::filesystem::path relative(relativePath); |
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429 |
428 | 430 /** |
431 The following lines should be equivalent to this one: | |
432 | |
429
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433 return (base / relative).string(); |
428 | 434 |
435 However, for some unknown reason, some versions of Boost do not | |
429
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436 make the proper path resolution when "baseDirectory" is an |
428 | 437 absolute path. So, a hack is used below. |
752
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438 **/ |
428 | 439 |
429
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440 if (relative.is_absolute()) |
427 | 441 { |
429
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442 return relative.string(); |
427 | 443 } |
444 else | |
445 { | |
429
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446 return (base / relative).string(); |
427 | 447 } |
394
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448 } |
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449 |
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450 std::string Configuration::InterpretStringParameterAsPath(const std::string& parameter) |
429
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451 { |
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452 boost::mutex::scoped_lock lock(globalMutex_); |
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453 return InterpretRelativePath(defaultDirectory_.string(), parameter); |
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454 } |
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455 |
394
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456 |
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457 void Configuration::GetGlobalListOfStringsParameter(std::list<std::string>& target, |
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458 const std::string& key) |
394
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459 { |
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460 boost::mutex::scoped_lock lock(globalMutex_); |
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461 |
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462 target.clear(); |
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463 |
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464 if (!configuration_->isMember(key)) |
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465 { |
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466 return; |
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467 } |
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468 |
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469 const Json::Value& lst = (*configuration_) [key]; |
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470 |
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471 if (lst.type() != Json::arrayValue) |
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472 { |
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473 throw OrthancException("Badly formatted list of strings"); |
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474 } |
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475 |
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476 for (Json::Value::ArrayIndex i = 0; i < lst.size(); i++) |
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477 { |
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478 target.push_back(lst[i].asString()); |
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479 } |
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480 } |
613 | 481 |
482 | |
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483 bool Configuration::IsSameAETitle(const std::string& aet1, |
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484 const std::string& aet2) |
690
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485 { |
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486 if (GetGlobalBoolParameter("StrictAetComparison", false)) |
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487 { |
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488 // Case-sensitive matching |
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489 return aet1 == aet2; |
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490 } |
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491 else |
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492 { |
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493 // Case-insensitive matching (default) |
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494 std::string tmp1, tmp2; |
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495 Toolbox::ToLowerCase(tmp1, aet1); |
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496 Toolbox::ToLowerCase(tmp2, aet2); |
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497 return tmp1 == tmp2; |
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498 } |
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499 } |
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500 |
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501 |
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502 bool Configuration::LookupDicomModalityUsingAETitle(RemoteModalityParameters& modality, |
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503 const std::string& aet) |
613 | 504 { |
505 std::set<std::string> modalities; | |
506 GetListOfDicomModalities(modalities); | |
507 | |
508 for (std::set<std::string>::const_iterator | |
656 | 509 it = modalities.begin(); it != modalities.end(); ++it) |
613 | 510 { |
511 try | |
512 { | |
806 | 513 GetDicomModalityUsingSymbolicName(modality, *it); |
725 | 514 |
806 | 515 if (IsSameAETitle(aet, modality.GetApplicationEntityTitle())) |
613 | 516 { |
617 | 517 return true; |
613 | 518 } |
519 } | |
520 catch (OrthancException&) | |
521 { | |
522 } | |
523 } | |
524 | |
617 | 525 return false; |
526 } | |
527 | |
528 | |
810
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529 bool Configuration::IsKnownAETitle(const std::string& aet) |
617 | 530 { |
806 | 531 RemoteModalityParameters modality; |
532 return LookupDicomModalityUsingAETitle(modality, aet); | |
617 | 533 } |
772
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534 |
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535 |
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536 RemoteModalityParameters Configuration::GetModalityUsingSymbolicName(const std::string& name) |
772
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537 { |
806 | 538 RemoteModalityParameters modality; |
539 GetDicomModalityUsingSymbolicName(modality, name); | |
772
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540 |
806 | 541 return modality; |
772
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542 } |
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543 |
773 | 544 |
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545 RemoteModalityParameters Configuration::GetModalityUsingAet(const std::string& aet) |
772
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546 { |
806 | 547 RemoteModalityParameters modality; |
772
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548 |
806 | 549 if (LookupDicomModalityUsingAETitle(modality, aet)) |
772
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550 { |
806 | 551 return modality; |
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552 } |
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553 else |
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554 { |
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555 throw OrthancException("Unknown modality for AET: " + aet); |
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556 } |
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557 } |
807
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558 |
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559 |
812 | 560 void Configuration::UpdateModality(const std::string& symbolicName, |
561 const RemoteModalityParameters& modality) | |
807
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562 { |
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563 boost::mutex::scoped_lock lock(globalMutex_); |
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564 |
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565 if (!configuration_->isMember("DicomModalities")) |
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566 { |
814 | 567 (*configuration_) ["DicomModalities"] = Json::objectValue; |
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568 } |
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569 |
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570 Json::Value& modalities = (*configuration_) ["DicomModalities"]; |
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571 if (modalities.type() != Json::objectValue) |
566a2fb3c1fb
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|
572 { |
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|
573 throw OrthancException(ErrorCode_BadFileFormat); |
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parents:
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574 } |
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575 |
812 | 576 modalities.removeMember(symbolicName); |
807
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577 |
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578 Json::Value v; |
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579 modality.ToJson(v); |
812 | 580 modalities[symbolicName] = v; |
807
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parents:
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581 } |
566a2fb3c1fb
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582 |
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diff
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|
583 |
810
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parents:
808
diff
changeset
|
584 void Configuration::RemoveModality(const std::string& symbolicName) |
807
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585 { |
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586 boost::mutex::scoped_lock lock(globalMutex_); |
566a2fb3c1fb
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587 |
566a2fb3c1fb
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|
588 if (!configuration_->isMember("DicomModalities")) |
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diff
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589 { |
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|
590 throw OrthancException(ErrorCode_BadFileFormat); |
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parents:
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diff
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591 } |
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parents:
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diff
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592 |
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parents:
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593 Json::Value& modalities = (*configuration_) ["DicomModalities"]; |
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594 if (modalities.type() != Json::objectValue) |
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|
595 { |
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|
596 throw OrthancException(ErrorCode_BadFileFormat); |
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parents:
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diff
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|
597 } |
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parents:
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diff
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|
598 |
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599 modalities.removeMember(symbolicName.c_str()); |
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600 } |
808
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parents:
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|
601 |
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|
602 |
812 | 603 void Configuration::UpdatePeer(const std::string& symbolicName, |
604 const OrthancPeerParameters& peer) | |
808
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parents:
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diff
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|
605 { |
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diff
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|
606 boost::mutex::scoped_lock lock(globalMutex_); |
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607 |
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608 if (!configuration_->isMember("OrthancPeers")) |
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|
609 { |
814 | 610 (*configuration_) ["OrthancPeers"] = Json::objectValue; |
808
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diff
changeset
|
611 } |
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diff
changeset
|
612 |
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diff
changeset
|
613 Json::Value& peers = (*configuration_) ["OrthancPeers"]; |
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614 if (peers.type() != Json::objectValue) |
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615 { |
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|
616 throw OrthancException(ErrorCode_BadFileFormat); |
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|
617 } |
2d9a000aa3a6
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|
618 |
812 | 619 peers.removeMember(symbolicName); |
808
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620 |
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621 Json::Value v; |
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622 peer.ToJson(v); |
812 | 623 peers[symbolicName] = v; |
808
2d9a000aa3a6
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|
624 } |
2d9a000aa3a6
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|
625 |
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|
626 |
810
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diff
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|
627 void Configuration::RemovePeer(const std::string& symbolicName) |
808
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diff
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628 { |
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diff
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|
629 boost::mutex::scoped_lock lock(globalMutex_); |
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630 |
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631 if (!configuration_->isMember("OrthancPeers")) |
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|
632 { |
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633 throw OrthancException(ErrorCode_BadFileFormat); |
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634 } |
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diff
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|
635 |
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changeset
|
636 Json::Value& peers = (*configuration_) ["OrthancPeers"]; |
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|
637 if (peers.type() != Json::objectValue) |
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|
638 { |
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|
639 throw OrthancException(ErrorCode_BadFileFormat); |
2d9a000aa3a6
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diff
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|
640 } |
2d9a000aa3a6
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diff
changeset
|
641 |
2d9a000aa3a6
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changeset
|
642 peers.removeMember(symbolicName.c_str()); |
2d9a000aa3a6
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diff
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|
643 } |
0 | 644 } |