Mercurial > hg > orthanc-wsi
view Applications/ApplicationToolbox.cpp @ 147:38d12348a153 OrthancWSI-0.5
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 23 Apr 2018 17:15:15 +0200 |
parents | a0f9a3df1110 |
children | fb8d4cd2f618 |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2018 Osimis S.A., Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Affero General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "ApplicationToolbox.h" #include "../Framework/Inputs/OpenSlideLibrary.h" #include <Core/DicomParsing/FromDcmtkBridge.h> #include <Core/HttpClient.h> #include <Core/Logging.h> #include <Core/MultiThreading/BagOfTasksProcessor.h> #include <Core/OrthancException.h> #include <Core/SystemToolbox.h> #include <boost/filesystem.hpp> #include <boost/lexical_cast.hpp> #include <boost/regex.hpp> #include <boost/date_time/posix_time/posix_time.hpp> #include <cassert> static const char* OPTION_CA_CERTIFICATES = "ca-certificates"; static const char* OPTION_PASSWORD = "password"; static const char* OPTION_PROXY = "proxy"; static const char* OPTION_TIMEOUT = "timeout"; static const char* OPTION_URL = "orthanc"; static const char* OPTION_USERNAME = "username"; static const char* OPTION_VERIFY_PEERS = "verify-peers"; static bool DisplayPerformanceWarning() { (void) DisplayPerformanceWarning; // Disable warning about unused function LOG(WARNING) << "Performance warning in whole-slide imaging: " << "Non-release build, runtime debug assertions are turned on"; return true; } namespace OrthancWSI { namespace ApplicationToolbox { void GlobalInitialize() { Orthanc::Logging::Initialize(); Orthanc::HttpClient::InitializeOpenSsl(); Orthanc::HttpClient::GlobalInitialize(); Orthanc::FromDcmtkBridge::InitializeDictionary(false /* don't load private dictionary */); assert(DisplayPerformanceWarning()); } void GlobalFinalize() { OrthancWSI::OpenSlideLibrary::Finalize(); Orthanc::HttpClient::GlobalFinalize(); Orthanc::HttpClient::FinalizeOpenSsl(); } static void PrintProgress(Orthanc::BagOfTasksProcessor::Handle* handle, bool* done) { unsigned int previous = 0; while (!*done) { unsigned int progress = static_cast<unsigned int>(100.0f * handle->GetProgress()); if (previous != progress) { LOG(WARNING) << "Progress: " << progress << "%"; previous = progress; } boost::this_thread::sleep(boost::posix_time::milliseconds(100)); } } void Execute(Orthanc::BagOfTasks& tasks, unsigned int threadsCount) { if (threadsCount > 1) { // Submit the tasks to a newly-created processor LOG(WARNING) << "Running " << tasks.GetSize() << " tasks"; LOG(WARNING) << "Using " << threadsCount << " threads for the computation"; Orthanc::BagOfTasksProcessor processor(threadsCount); std::auto_ptr<Orthanc::BagOfTasksProcessor::Handle> handle(processor.Submit(tasks)); // Start a thread to display the progress bool done = false; boost::thread progress(PrintProgress, handle.get(), &done); // Wait for the completion of the tasks bool success = handle->Join(); // Stop the progress-printing thread done = true; if (progress.joinable()) { progress.join(); } if (success) { LOG(WARNING) << "All tasks have finished"; } else { LOG(ERROR) << "Error has occurred, aborting"; throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); } } else { LOG(WARNING) << "Running " << tasks.GetSize() << " tasks without multithreading"; unsigned int previous = 0; unsigned int size = tasks.GetSize(); // No multithreading while (!tasks.IsEmpty()) { std::auto_ptr<Orthanc::ICommand> task(tasks.Pop()); if (task->Execute()) { unsigned int progress = static_cast<unsigned int>(100.0f * static_cast<float>((size - tasks.GetSize())) / static_cast<float>(size)); if (progress != previous) { LOG(WARNING) << "Progress: " << progress << "%"; previous = progress; } } else { LOG(ERROR) << "Error has occurred, aborting"; throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); } } } } void ParseColor(uint8_t& red, uint8_t& green, uint8_t& blue, const std::string& color) { boost::regex pattern("([0-9]*),([0-9]*),([0-9]*)"); bool ok = false; boost::cmatch what; // Set white as the default color to avoid compiler warnings red = 255; green = 255; blue = 255; try { if (regex_match(color.c_str(), what, pattern)) { int r = boost::lexical_cast<int>(what[1]); int g = boost::lexical_cast<int>(what[2]); int b = boost::lexical_cast<int>(what[3]); if (r >= 0 && r <= 255 && g >= 0 && g <= 255 && b >= 0 && b <= 255) { red = static_cast<uint8_t>(r); green = static_cast<uint8_t>(g); blue = static_cast<uint8_t>(b); ok = true; } } } catch (boost::bad_lexical_cast&) { } if (!ok) { LOG(ERROR) << "Bad color specification: " << color; throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); } } void PrintVersion(const char* path) { std::cout << path << " " << ORTHANC_WSI_VERSION << std::endl << "Copyright (C) 2012-2016 Sebastien Jodogne, " << "Medical Physics Department, University Hospital of Liege (Belgium)" << std::endl << "Copyright (C) 2017-2018 Osimis S.A. (Belgium)" << std::endl << "Licensing AGPL: GNU AGPL version 3 or later <http://gnu.org/licenses/agpl.html>." << std::endl << "This is free software: you are free to change and redistribute it." << std::endl << "There is NO WARRANTY, to the extent permitted by law." << std::endl << std::endl << "Written by Sebastien Jodogne <s.jodogne@gmail.com>" << std::endl; } void ShowVersionInLog(const char* path) { std::string version(ORTHANC_WSI_VERSION); if (version == "mainline") { try { boost::filesystem::path exe(Orthanc::SystemToolbox::GetPathToExecutable()); std::time_t creation = boost::filesystem::last_write_time(exe); boost::posix_time::ptime converted(boost::posix_time::from_time_t(creation)); version += " (" + boost::posix_time::to_iso_string(converted) + ")"; } catch (...) { } } LOG(WARNING) << "Orthanc WSI version: " << version; } void AddRestApiOptions(boost::program_options::options_description& section) { section.add_options() (OPTION_USERNAME, boost::program_options::value<std::string>(), "Username for the target Orthanc server") (OPTION_PASSWORD, boost::program_options::value<std::string>(), "Password for the target Orthanc server") (OPTION_PROXY, boost::program_options::value<std::string>(), "HTTP proxy to be used") (OPTION_TIMEOUT, boost::program_options::value<int>()->default_value(0), "HTTP timeout (in seconds, 0 means no timeout)") (OPTION_VERIFY_PEERS, boost::program_options::value<bool>()->default_value(true), "Enable the verification of the peers during HTTPS requests") (OPTION_CA_CERTIFICATES, boost::program_options::value<std::string>()->default_value(""), "Path to the CA (certification authority) certificates to validate peers in HTTPS requests") ; } void SetupRestApi(Orthanc::WebServiceParameters& parameters, const boost::program_options::variables_map& options) { if (options.count(OPTION_URL)) { parameters.SetUrl(options[OPTION_URL].as<std::string>()); } if (options.count(OPTION_USERNAME) && options.count(OPTION_PASSWORD)) { parameters.SetUsername(options[OPTION_USERNAME].as<std::string>()); parameters.SetPassword(options[OPTION_PASSWORD].as<std::string>()); } if (options.count(OPTION_TIMEOUT)) { int timeout = options[OPTION_TIMEOUT].as<int>(); if (timeout < 0) { LOG(ERROR) << "Timeouts cannot be negative: " << timeout; throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); } else { Orthanc::HttpClient::SetDefaultTimeout(timeout); } if (options.count(OPTION_PROXY)) { Orthanc::HttpClient::SetDefaultProxy(options[OPTION_PROXY].as<std::string>()); } } #if ORTHANC_ENABLE_SSL == 1 if (options.count(OPTION_VERIFY_PEERS) || options.count(OPTION_CA_CERTIFICATES)) { Orthanc::HttpClient::ConfigureSsl(options[OPTION_VERIFY_PEERS].as<bool>(), options[OPTION_CA_CERTIFICATES].as<std::string>()); } #endif } } }