Mercurial > hg > orthanc-wsi
annotate Framework/DicomizerParameters.cpp @ 247:ad51ab8e1b2f
stop forcing C++11 in CMake
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Tue, 07 Dec 2021 12:41:52 +0100 |
| parents | 793b8f9c9d52 |
| children | 20a730889ae2 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
|
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 0 | 7 * |
| 8 * This program is free software: you can redistribute it and/or | |
| 9 * modify it under the terms of the GNU Affero General Public License | |
| 10 * as published by the Free Software Foundation, either version 3 of | |
| 11 * the License, or (at your option) any later version. | |
| 12 * | |
| 13 * This program is distributed in the hope that it will be useful, but | |
| 14 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 16 * Affero General Public License for more details. | |
| 17 * | |
| 18 * You should have received a copy of the GNU Affero General Public License | |
| 19 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 20 **/ | |
| 21 | |
| 22 | |
|
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23 #include "PrecompiledHeadersWSI.h" |
| 0 | 24 #include "DicomizerParameters.h" |
| 25 | |
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26 #include "ImageToolbox.h" |
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27 #include "Targets/FolderTarget.h" |
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28 #include "Targets/OrthancTarget.h" |
| 0 | 29 |
| 192 | 30 #include <OrthancException.h> |
| 0 | 31 |
| 32 #include <boost/thread.hpp> | |
| 33 #include <boost/lexical_cast.hpp> | |
| 34 | |
| 35 namespace OrthancWSI | |
| 36 { | |
| 37 static unsigned int ChooseNumberOfThreads() | |
| 38 { | |
| 39 unsigned int nthreads = boost::thread::hardware_concurrency(); | |
| 40 | |
| 41 if (nthreads % 2 == 0) | |
| 42 { | |
| 43 nthreads = nthreads / 2; | |
| 44 } | |
| 45 else | |
| 46 { | |
| 47 nthreads = nthreads / 2 + 1; | |
| 48 } | |
| 49 | |
| 50 if (nthreads == 0) | |
| 51 { | |
| 52 nthreads = 1; | |
| 53 } | |
| 54 | |
| 55 return nthreads; | |
| 56 } | |
| 57 | |
| 58 | |
| 91 | 59 DicomizerParameters::DicomizerParameters() : |
| 60 safetyCheck_(false), | |
| 61 repaintBackground_(false), | |
| 62 targetCompression_(ImageCompression_Jpeg), | |
| 63 hasTargetTileSize_(false), | |
| 64 targetTileWidth_(512), | |
| 65 targetTileHeight_(512), | |
| 66 maxDicomFileSize_(10 * 1024 * 1024), // 10MB | |
| 67 reconstructPyramid_(false), | |
| 68 pyramidLevelsCount_(0), | |
| 69 pyramidLowerLevelsCount_(0), | |
| 70 smooth_(false), | |
| 71 jpegQuality_(90), | |
| 72 forceReencode_(false), | |
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73 opticalPath_(OpticalPath_Brightfield), |
| 246 | 74 isCytomineSource_(false), |
| 75 cytomineImageInstanceId_(-1), | |
| 76 cytomineCompression_(ImageCompression_Png) | |
| 0 | 77 { |
| 78 backgroundColor_[0] = 255; | |
| 79 backgroundColor_[1] = 255; | |
| 80 backgroundColor_[2] = 255; | |
| 81 threadsCount_ = ChooseNumberOfThreads(); | |
| 82 } | |
| 83 | |
| 84 | |
| 85 void DicomizerParameters::SetBackgroundColor(uint8_t red, | |
| 86 uint8_t green, | |
| 87 uint8_t blue) | |
| 88 { | |
| 89 repaintBackground_ = true; | |
| 90 backgroundColor_[0] = red; | |
| 91 backgroundColor_[1] = green; | |
| 92 backgroundColor_[2] = blue; | |
| 93 } | |
| 94 | |
| 95 | |
| 96 void DicomizerParameters::SetTargetTileSize(unsigned int width, | |
| 97 unsigned int height) | |
| 98 { | |
| 99 hasTargetTileSize_ = true; | |
| 100 targetTileWidth_ = width; | |
| 101 targetTileHeight_ = height; | |
| 102 } | |
| 103 | |
| 104 | |
| 105 unsigned int DicomizerParameters::GetTargetTileWidth(unsigned int defaultWidth) const | |
| 106 { | |
| 107 if (hasTargetTileSize_ && | |
| 108 targetTileWidth_ != 0) | |
| 109 { | |
| 110 return targetTileWidth_; | |
| 111 } | |
| 112 else | |
| 113 { | |
| 114 return defaultWidth; | |
| 115 } | |
| 116 } | |
| 117 | |
| 118 | |
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119 unsigned int DicomizerParameters::GetTargetTileWidth(const ITiledPyramid& source) const |
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120 { |
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121 ImageToolbox::CheckConstantTileSize(source); |
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122 return GetTargetTileWidth(source.GetTileWidth(0)); |
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123 } |
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124 |
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125 |
| 0 | 126 unsigned int DicomizerParameters::GetTargetTileHeight(unsigned int defaultHeight) const |
| 127 { | |
| 128 if (hasTargetTileSize_ && | |
| 129 targetTileHeight_ != 0) | |
| 130 { | |
| 131 return targetTileHeight_; | |
| 132 } | |
| 133 else | |
| 134 { | |
| 135 return defaultHeight; | |
| 136 } | |
| 137 } | |
| 138 | |
| 139 | |
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140 unsigned int DicomizerParameters::GetTargetTileHeight(const ITiledPyramid& source) const |
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141 { |
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142 ImageToolbox::CheckConstantTileSize(source); |
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143 return GetTargetTileHeight(source.GetTileHeight(0)); |
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144 } |
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145 |
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146 |
| 0 | 147 void DicomizerParameters::SetThreadsCount(unsigned int threads) |
| 148 { | |
| 149 if (threads == 0) | |
| 150 { | |
| 151 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 152 } | |
| 153 | |
| 154 threadsCount_ = threads; | |
| 155 } | |
| 156 | |
| 157 | |
| 158 void DicomizerParameters::SetDicomMaxFileSize(unsigned int size) | |
| 159 { | |
| 160 maxDicomFileSize_ = size; | |
| 161 } | |
| 162 | |
| 163 | |
| 164 void DicomizerParameters::SetPyramidLevelsCount(unsigned int count) | |
| 165 { | |
| 91 | 166 if (count == 0) |
| 0 | 167 { |
| 168 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 169 } | |
| 170 | |
| 171 pyramidLevelsCount_ = count; | |
| 172 } | |
| 173 | |
| 174 | |
| 175 unsigned int DicomizerParameters::GetPyramidLevelsCount(const IPyramidWriter& target, | |
| 176 const ITiledPyramid& source) const | |
| 177 { | |
| 178 if (pyramidLevelsCount_ != 0) | |
| 179 { | |
| 180 return pyramidLevelsCount_; | |
| 181 } | |
| 182 | |
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183 ImageToolbox::CheckConstantTileSize(source); |
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184 |
| 0 | 185 // By default, the number of levels for the pyramid is taken so that |
| 186 // the upper level is reduced either to 1 column of tiles, or to 1 | |
| 187 // row of tiles. | |
| 188 unsigned int totalWidth = source.GetLevelWidth(0); | |
| 189 unsigned int totalHeight = source.GetLevelHeight(0); | |
| 190 | |
| 191 unsigned int countLevels = 1; | |
| 192 for (;;) | |
| 193 { | |
| 194 unsigned int zoom = 1 << (countLevels - 1); | |
| 195 | |
| 196 if (CeilingDivision(totalWidth, zoom) <= target.GetTileWidth() || | |
| 197 CeilingDivision(totalHeight, zoom) <= target.GetTileHeight()) | |
| 198 { | |
| 199 break; | |
| 200 } | |
| 201 | |
| 202 countLevels += 1; | |
| 203 } | |
| 204 | |
| 205 return countLevels; | |
| 206 } | |
| 207 | |
| 208 | |
| 209 void DicomizerParameters::SetPyramidLowerLevelsCount(unsigned int count) | |
| 210 { | |
| 91 | 211 if (count == 0) |
| 0 | 212 { |
| 213 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 214 } | |
| 215 | |
| 216 pyramidLowerLevelsCount_ = count; | |
| 217 } | |
| 218 | |
| 219 | |
| 220 unsigned int DicomizerParameters::GetPyramidLowerLevelsCount(const IPyramidWriter& target, | |
| 221 const ITiledPyramid& source) const | |
| 222 { | |
| 223 if (pyramidLowerLevelsCount_ != 0) | |
| 224 { | |
| 225 return pyramidLowerLevelsCount_; | |
| 226 } | |
| 227 | |
| 228 unsigned int fullNumberOfTiles = ( | |
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229 CeilingDivision(source.GetLevelWidth(0), source.GetTileWidth(0)) * |
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230 CeilingDivision(source.GetLevelHeight(0), source.GetTileHeight(0))); |
| 0 | 231 |
| 232 // By default, the number of lower levels in the pyramid is chosen | |
| 233 // as a compromise between the number of tasks (there should not be | |
| 234 // too few tasks, otherwise multithreading would not be efficient) | |
| 235 // and memory consumption (maximum 64MB of RAM due to the decoding | |
| 236 // of the tiles of the source image per thread: cf. PyramidReader). | |
| 237 unsigned int result = 1; | |
| 238 for (;;) | |
| 239 { | |
| 240 unsigned int zoom = 1 << (result - 1); | |
| 241 unsigned int numberOfTiles = CeilingDivision(fullNumberOfTiles, zoom * zoom); | |
| 242 | |
| 243 if (result + 1 > target.GetLevelCount() || | |
| 244 numberOfTiles < 4 * GetThreadsCount() || | |
| 245 zoom * target.GetTileWidth() > 4096 || | |
| 246 zoom * target.GetTileHeight() > 4096) | |
| 247 { | |
| 248 break; | |
| 249 } | |
| 250 | |
| 251 result += 1; | |
| 252 } | |
| 253 | |
| 254 return result - 1; | |
| 255 } | |
| 256 | |
| 257 | |
| 258 void DicomizerParameters::SetJpegQuality(int quality) | |
| 259 { | |
| 260 if (quality <= 0 || | |
| 261 quality > 100) | |
| 262 { | |
| 263 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 264 } | |
| 265 | |
| 266 jpegQuality_ = quality; | |
| 267 } | |
| 268 | |
| 269 | |
| 270 IFileTarget* DicomizerParameters::CreateTarget() const | |
| 271 { | |
| 272 if (folder_.empty() || | |
| 273 folderPattern_.empty()) | |
| 274 { | |
| 275 return new OrthancTarget(orthanc_); | |
| 276 } | |
| 277 else | |
| 278 { | |
| 279 return new FolderTarget(folder_ + "/" + folderPattern_); | |
| 280 } | |
| 281 } | |
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282 |
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283 |
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284 void DicomizerParameters::SetCytomineSource(const std::string& url, |
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285 const std::string& publicKey, |
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286 const std::string& privateKey, |
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287 int imageInstanceId, |
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288 ImageCompression cytomineCompression) |
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289 { |
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290 isCytomineSource_ = true; |
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291 cytomineServer_.SetUrl(url); |
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292 cytominePublicKey_ = publicKey; |
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293 cytominePrivateKey_ = privateKey; |
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294 cytomineImageInstanceId_ = imageInstanceId; |
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295 cytomineCompression_ = cytomineCompression; |
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296 } |
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297 |
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298 |
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299 const Orthanc::WebServiceParameters& DicomizerParameters::GetCytomineServer() const |
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300 { |
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301 if (isCytomineSource_) |
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302 { |
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303 return cytomineServer_; |
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304 } |
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305 else |
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306 { |
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307 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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308 } |
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309 } |
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310 |
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311 |
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312 const std::string& DicomizerParameters::GetCytominePublicKey() const |
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313 { |
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314 if (isCytomineSource_) |
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315 { |
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316 return cytominePublicKey_; |
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317 } |
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318 else |
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319 { |
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320 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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321 } |
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322 } |
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323 |
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324 |
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325 const std::string& DicomizerParameters::GetCytominePrivateKey() const |
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326 { |
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327 if (isCytomineSource_) |
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328 { |
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329 return cytominePrivateKey_; |
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330 } |
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331 else |
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332 { |
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333 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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334 } |
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335 } |
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336 |
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337 |
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338 int DicomizerParameters::GetCytomineImageInstanceId() const |
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339 { |
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340 if (isCytomineSource_) |
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341 { |
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342 return cytomineImageInstanceId_; |
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343 } |
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344 else |
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345 { |
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346 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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347 } |
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348 } |
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349 |
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350 |
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351 ImageCompression DicomizerParameters::GetCytomineCompression() const |
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352 { |
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353 if (isCytomineSource_) |
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354 { |
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355 return cytomineCompression_; |
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356 } |
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357 else |
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358 { |
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359 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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360 } |
|
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361 } |
| 0 | 362 } |