Mercurial > hg > orthanc-wsi
annotate Applications/ApplicationToolbox.cpp @ 116:a18bfe1fdd62
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 04 Jan 2018 10:49:34 +0100 |
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0 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU Affero General Public License | |
9 * as published by the Free Software Foundation, either version 3 of | |
10 * the License, or (at your option) any later version. | |
11 * | |
12 * This program is distributed in the hope that it will be useful, but | |
13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
15 * Affero General Public License for more details. | |
16 * | |
17 * You should have received a copy of the GNU Affero General Public License | |
18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
19 **/ | |
20 | |
21 | |
22 #include "ApplicationToolbox.h" | |
23 | |
24 #include "../Framework/Inputs/OpenSlideLibrary.h" | |
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25 #include "../Resources/Orthanc/Core/HttpClient.h" |
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26 #include "../Resources/Orthanc/Core/Logging.h" |
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27 #include "../Resources/Orthanc/Core/MultiThreading/BagOfTasksProcessor.h" |
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28 #include "../Resources/Orthanc/Core/SystemToolbox.h" |
116 | 29 #include "../Resources/Orthanc/Core/DicomParsing/FromDcmtkBridge.h" |
0 | 30 |
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31 #include <boost/filesystem.hpp> |
0 | 32 #include <boost/lexical_cast.hpp> |
33 #include <boost/regex.hpp> | |
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34 #include <boost/date_time/posix_time/posix_time.hpp> |
87 | 35 #include <cassert> |
36 | |
37 | |
38 static bool DisplayPerformanceWarning() | |
39 { | |
40 (void) DisplayPerformanceWarning; // Disable warning about unused function | |
41 LOG(WARNING) << "Performance warning in whole-slide imaging: " | |
42 << "Non-release build, runtime debug assertions are turned on"; | |
43 return true; | |
44 } | |
45 | |
0 | 46 |
47 namespace OrthancWSI | |
48 { | |
49 namespace ApplicationToolbox | |
50 { | |
51 void GlobalInitialize() | |
52 { | |
53 Orthanc::Logging::Initialize(); | |
54 Orthanc::HttpClient::InitializeOpenSsl(); | |
55 Orthanc::HttpClient::GlobalInitialize(); | |
51 | 56 Orthanc::FromDcmtkBridge::InitializeDictionary(false /* don't load private dictionary */); |
87 | 57 assert(DisplayPerformanceWarning()); |
0 | 58 } |
59 | |
60 | |
61 void GlobalFinalize() | |
62 { | |
63 OrthancWSI::OpenSlideLibrary::Finalize(); | |
64 Orthanc::HttpClient::GlobalFinalize(); | |
65 Orthanc::HttpClient::FinalizeOpenSsl(); | |
66 } | |
67 | |
68 | |
69 static void PrintProgress(Orthanc::BagOfTasksProcessor::Handle* handle, | |
70 bool* done) | |
71 { | |
72 unsigned int previous = 0; | |
73 | |
74 while (!*done) | |
75 { | |
76 unsigned int progress = static_cast<unsigned int>(100.0f * handle->GetProgress()); | |
77 if (previous != progress) | |
78 { | |
79 LOG(WARNING) << "Progress: " << progress << "%"; | |
80 previous = progress; | |
81 } | |
82 | |
83 boost::this_thread::sleep(boost::posix_time::milliseconds(100)); | |
84 } | |
85 } | |
86 | |
87 | |
88 void Execute(Orthanc::BagOfTasks& tasks, | |
89 unsigned int threadsCount) | |
90 { | |
91 if (threadsCount > 1) | |
92 { | |
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93 // Submit the tasks to a newly-created processor |
0 | 94 LOG(WARNING) << "Running " << tasks.GetSize() << " tasks"; |
95 LOG(WARNING) << "Using " << threadsCount << " threads for the computation"; | |
96 Orthanc::BagOfTasksProcessor processor(threadsCount); | |
97 std::auto_ptr<Orthanc::BagOfTasksProcessor::Handle> handle(processor.Submit(tasks)); | |
98 | |
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99 // Start a thread to display the progress |
0 | 100 bool done = false; |
101 boost::thread progress(PrintProgress, handle.get(), &done); | |
102 | |
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103 // Wait for the completion of the tasks |
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104 bool success = handle->Join(); |
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105 |
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106 // Stop the progress-printing thread |
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107 done = true; |
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108 |
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109 if (progress.joinable()) |
0 | 110 { |
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111 progress.join(); |
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112 } |
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113 |
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114 if (success) |
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115 { |
0 | 116 LOG(WARNING) << "All tasks have finished"; |
117 } | |
118 else | |
119 { | |
120 LOG(ERROR) << "Error has occurred, aborting"; | |
121 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
122 } | |
123 } | |
124 else | |
125 { | |
126 LOG(WARNING) << "Running " << tasks.GetSize() << " tasks without multithreading"; | |
127 | |
128 unsigned int previous = 0; | |
129 unsigned int size = tasks.GetSize(); | |
130 | |
131 // No multithreading | |
132 while (!tasks.IsEmpty()) | |
133 { | |
134 std::auto_ptr<Orthanc::ICommand> task(tasks.Pop()); | |
135 if (task->Execute()) | |
136 { | |
137 unsigned int progress = static_cast<unsigned int>(100.0f * | |
138 static_cast<float>((size - tasks.GetSize())) / | |
139 static_cast<float>(size)); | |
140 if (progress != previous) | |
141 { | |
142 LOG(WARNING) << "Progress: " << progress << "%"; | |
143 previous = progress; | |
144 } | |
145 } | |
146 else | |
147 { | |
148 LOG(ERROR) << "Error has occurred, aborting"; | |
149 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
150 } | |
151 } | |
152 } | |
153 } | |
154 | |
155 | |
156 void ParseColor(uint8_t& red, | |
157 uint8_t& green, | |
158 uint8_t& blue, | |
159 const std::string& color) | |
160 { | |
161 boost::regex pattern("([0-9]*),([0-9]*),([0-9]*)"); | |
162 | |
163 bool ok = false; | |
164 boost::cmatch what; | |
165 | |
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166 // Set white as the default color to avoid compiler warnings |
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167 red = 255; |
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168 green = 255; |
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169 blue = 255; |
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170 |
0 | 171 try |
172 { | |
173 if (regex_match(color.c_str(), what, pattern)) | |
174 { | |
175 int r = boost::lexical_cast<int>(what[1]); | |
176 int g = boost::lexical_cast<int>(what[2]); | |
177 int b = boost::lexical_cast<int>(what[3]); | |
178 | |
179 if (r >= 0 && r <= 255 && | |
180 g >= 0 && g <= 255 && | |
181 b >= 0 && b <= 255) | |
182 { | |
183 red = static_cast<uint8_t>(r); | |
184 green = static_cast<uint8_t>(g); | |
185 blue = static_cast<uint8_t>(b); | |
186 ok = true; | |
187 } | |
188 } | |
189 } | |
190 catch (boost::bad_lexical_cast&) | |
191 { | |
192 } | |
193 | |
194 if (!ok) | |
195 { | |
196 LOG(ERROR) << "Bad color specification: " << color; | |
197 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
198 } | |
199 } | |
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200 |
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201 |
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202 void PrintVersion(const char* path) |
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203 { |
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204 std::cout |
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205 << path << " " << ORTHANC_WSI_VERSION << std::endl |
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206 << "Copyright (C) 2012-2016 Sebastien Jodogne, " |
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207 << "Medical Physics Department, University Hospital of Liege (Belgium)" << std::endl |
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208 << "Copyright (C) 2017-2018 Osimis S.A. (Belgium)" << std::endl |
31 | 209 << "Licensing AGPL: GNU AGPL version 3 or later <http://gnu.org/licenses/agpl.html>." << std::endl |
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210 << "This is free software: you are free to change and redistribute it." << std::endl |
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211 << "There is NO WARRANTY, to the extent permitted by law." << std::endl |
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212 << std::endl |
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213 << "Written by Sebastien Jodogne <s.jodogne@gmail.com>" << std::endl; |
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214 } |
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215 |
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216 |
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217 void ShowVersionInLog(const char* path) |
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218 { |
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219 std::string version(ORTHANC_WSI_VERSION); |
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220 |
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221 if (version == "mainline") |
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222 { |
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223 try |
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224 { |
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225 boost::filesystem::path exe(Orthanc::SystemToolbox::GetPathToExecutable()); |
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226 std::time_t creation = boost::filesystem::last_write_time(exe); |
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227 boost::posix_time::ptime converted(boost::posix_time::from_time_t(creation)); |
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228 version += " (" + boost::posix_time::to_iso_string(converted) + ")"; |
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229 } |
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230 catch (...) |
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231 { |
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232 } |
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233 } |
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234 |
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235 LOG(WARNING) << "Orthanc WSI version: " << version; |
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236 } |
0 | 237 } |
238 } |