Mercurial > hg > orthanc-wsi
annotate Framework/DicomToolbox.cpp @ 241:5ed8d1cee52d
update SyncOrthancFolder.py to use Python 3
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 06 Dec 2021 13:24:33 +0100 |
parents | c35a3a0627b9 |
children | 49f647ed1b4c |
rev | line source |
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0 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
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upgrade to year 2021
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU Affero General Public License | |
9 * as published by the Free Software Foundation, either version 3 of | |
10 * the License, or (at your option) any later version. | |
11 * | |
12 * This program is distributed in the hope that it will be useful, but | |
13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
15 * Affero General Public License for more details. | |
16 * | |
17 * You should have received a copy of the GNU Affero General Public License | |
18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
19 **/ | |
20 | |
21 | |
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preparing for precompiled headers
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22 #include "PrecompiledHeadersWSI.h" |
0 | 23 #include "DicomToolbox.h" |
24 | |
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25 #include <Compatibility.h> // For std::unique_ptr |
192 | 26 #include <Logging.h> |
27 #include <OrthancException.h> | |
28 #include <Toolbox.h> | |
0 | 29 |
30 #if ORTHANC_ENABLE_DCMTK == 1 | |
31 # include <dcmtk/dcmdata/dcelem.h> | |
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use of OrthancPluginsExports.cmake, link against system-wide orthanc framework
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32 # include <dcmtk/dcmdata/dcitem.h> |
0 | 33 # include <dcmtk/dcmdata/dcsequen.h> |
83 | 34 # include <dcmtk/dcmdata/dcvrat.h> |
0 | 35 #endif |
36 | |
37 namespace OrthancWSI | |
38 { | |
39 namespace DicomToolbox | |
40 { | |
41 #if ORTHANC_ENABLE_DCMTK == 1 | |
42 void SetStringTag(DcmItem& dataset, | |
43 const DcmTagKey& key, | |
44 const std::string& value) | |
45 { | |
46 if (!dataset.tagExists(key) && | |
47 !dataset.putAndInsertString(key, value.c_str()).good()) | |
48 { | |
49 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
50 } | |
51 } | |
52 | |
53 void SetUint16Tag(DcmItem& dataset, | |
54 const DcmTagKey& key, | |
55 uint16_t value) | |
56 { | |
57 if (!dataset.tagExists(key) && | |
58 !dataset.putAndInsertUint16(key, value).good()) | |
59 { | |
60 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
61 } | |
62 } | |
63 | |
64 | |
65 void SetUint32Tag(DcmItem& dataset, | |
66 const DcmTagKey& key, | |
67 uint32_t value) | |
68 { | |
69 if (!dataset.tagExists(key) && | |
70 !dataset.putAndInsertUint32(key, value).good()) | |
71 { | |
72 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
73 } | |
74 } | |
75 | |
76 | |
83 | 77 void SetAttributeTag(DcmItem& dataset, |
78 const DcmTagKey& key, | |
79 const DcmTagKey& value) | |
80 { | |
81 if (!dataset.tagExists(key)) | |
82 { | |
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83 std::unique_ptr<DcmAttributeTag> tag(new DcmAttributeTag(key)); |
83 | 84 |
85 if (!tag->putTagVal(value).good() || | |
86 !dataset.insert(tag.release()).good()) | |
87 { | |
88 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
89 } | |
90 } | |
91 } | |
92 | |
93 | |
0 | 94 DcmItem* ExtractSingleSequenceItem(DcmItem& dataset, |
95 const DcmTagKey& key) | |
96 { | |
97 DcmElement* element = NULL; | |
216 | 98 if (!dataset.findAndGetElement(key, element).good() || |
0 | 99 element == NULL) |
100 { | |
101 return NULL; | |
102 } | |
103 | |
104 if (element->getVR() != EVR_SQ) | |
105 { | |
106 DcmTag tag(key); | |
107 LOG(ERROR) << "The following element in the DICOM dataset is not a sequence as expected: " << tag.getTagName(); | |
108 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat); | |
109 } | |
110 | |
111 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element); | |
112 if (sequence.card() != 1) | |
113 { | |
114 LOG(ERROR) << "Bad number of elements in the sequence (it must contain exactly 1 element)"; | |
115 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat); | |
116 } | |
117 | |
118 return sequence.getItem(0); | |
119 } | |
120 | |
121 | |
122 uint16_t GetUint16Tag(DcmItem& dataset, | |
123 const DcmTagKey& key) | |
124 { | |
125 uint16_t value; | |
126 if (dataset.findAndGetUint16(key, value).good()) | |
127 { | |
128 return value; | |
129 } | |
130 else | |
131 { | |
132 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentTag); | |
133 } | |
134 } | |
135 | |
136 | |
137 uint32_t GetUint32Tag(DcmItem& dataset, | |
138 const DcmTagKey& key) | |
139 { | |
140 Uint32 value; | |
141 if (dataset.findAndGetUint32(key, value).good()) | |
142 { | |
143 return value; | |
144 } | |
145 else | |
146 { | |
147 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentTag); | |
148 } | |
149 } | |
150 | |
151 | |
152 int32_t GetInt32Tag(DcmItem& dataset, | |
153 const DcmTagKey& key) | |
154 { | |
155 Sint32 value; | |
156 if (dataset.findAndGetSint32(key, value).good()) | |
157 { | |
158 return value; | |
159 } | |
160 else | |
161 { | |
162 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentTag); | |
163 } | |
164 } | |
165 | |
166 | |
167 std::string GetStringTag(DcmItem& dataset, | |
168 const DcmTagKey& key) | |
169 { | |
170 const char* value = NULL; | |
171 if (dataset.findAndGetString(key, value).good() && | |
172 value != NULL) | |
173 { | |
174 return Orthanc::Toolbox::StripSpaces(value); | |
175 } | |
176 else | |
177 { | |
178 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentTag); | |
179 } | |
180 } | |
181 #endif | |
182 } | |
183 } |