Mercurial > hg > orthanc-tests
view NewTests/Housekeeper/test_housekeeper2.py @ 718:e1b7654fb58d attach-custom-data
merged find-refactoring -> attach-custom-data
author | Alain Mazy <am@orthanc.team> |
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date | Wed, 09 Oct 2024 11:07:09 +0200 |
parents | 810390d3968a |
children |
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import unittest import time from helpers import OrthancTestCase, Helpers from orthanc_api_client import OrthancApiClient, generate_test_dicom_file import pathlib here = pathlib.Path(__file__).parent.resolve() class TestHousekeeper2(OrthancTestCase): @classmethod def prepare(cls): print('-------------- preparing TestHousekeeper2 tests') cls.clear_storage(storage_name="housekeeper2") cls.launch_orthanc_to_prepare_db( config_name="housekeeper2_preparation", storage_name="housekeeper2", config={ "Housekeeper": { "Enable": False } }, plugins=Helpers.plugins ) # upload a study and keep track of data before housekeeper runs cls.o.upload_folder(here / "../../Database/Knix/Loc") cls.instance_before, cls.series_before, cls.study_before, cls.patient_before, cls.instance_metadata_before = cls.get_infos() cls.kill_orthanc() time.sleep(3) # generate config for orthanc-under-tests (change StorageCompression and add ExtraMainDicomTags) config_path = cls.generate_configuration( config_name="housekeeper2_under_test", storage_name="housekeeper2", config={ "IngestTranscoding": "1.2.840.10008.1.2.4.80", "ExtraMainDicomTags": { "Patient" : ["PatientWeight", "PatientAge"], "Study": ["NameOfPhysiciansReadingStudy"], "Series": ["ScanOptions"], "Instance": ["Rows", "Columns", "DerivationCodeSequence"] }, "Housekeeper": { "Enable": True }, "KeepAliveTimeout": 2 }, plugins=Helpers.plugins ) print('-------------- prepared TestHousekeeper2 tests') if Helpers.break_after_preparation: print(f"++++ It is now time to start your Orthanc under tests with configuration file '{config_path}' +++++") input("Press Enter to continue") else: print('-------------- launching TestHousekeeper2 tests') cls.launch_orthanc_under_tests( config_path=config_path, config_name="housekeeper2_under_test", storage_name="housekeeper2", plugins=Helpers.plugins, enable_verbose=False ) print('-------------- waiting for orthanc-under-tests to be available') cls.o.wait_started() completed = False while not completed: print('-------------- waiting for housekeeper2 to finish processing') time.sleep(1) housekeeper_status = cls.o.get_json("plugins/housekeeper/status") completed = (housekeeper_status["LastProcessedConfiguration"]["IngestTranscoding"] == "1.2.840.10008.1.2.4.80") \ and (housekeeper_status["LastChangeToProcess"] == housekeeper_status["LastProcessedChange"]) @classmethod def get_infos(cls): instance_id = cls.o.lookup( needle="1.2.840.113619.2.176.2025.1499492.7040.1171286241.704", filter="Instance" )[0] instance_info = cls.o.get_json(endpoint=f"instances/{instance_id}") series_id = instance_info["ParentSeries"] series_info = cls.o.get_json(endpoint=f"series/{series_id}") study_id = series_info["ParentStudy"] study_info = cls.o.get_json(endpoint=f"studies/{study_id}") patient_id = study_info["ParentPatient"] patient_info = cls.o.get_json(endpoint=f"patients/{patient_id}") instance_metadata = cls.o.get_json(endpoint=f"instances/{instance_id}/metadata?expand") return instance_info, series_info, study_info, patient_info, instance_metadata def test_before_after_reconstruction(self): if self.o.is_orthanc_version_at_least(1, 12, 4): # make sure it has run once ! housekeeper_status = self.o.get_json("housekeeper/status") self.assertIsNotNone(housekeeper_status["LastTimeStarted"]) instance_after, series_after, study_after, patient_after, instance_metadata_after = self.get_infos() # extra tags were not in DB before reconstruction self.assertNotIn("Rows", self.instance_before["MainDicomTags"]) self.assertNotIn("DerivationCodeSequence", self.instance_before["MainDicomTags"]) self.assertNotIn("ScanOptions", self.series_before["MainDicomTags"]) self.assertNotIn("NameOfPhysiciansReadingStudy", self.study_before["MainDicomTags"]) self.assertNotIn("PatientWeight", self.patient_before["MainDicomTags"]) # extra tags are in DB after reconstruction self.assertIn("Rows", instance_after["MainDicomTags"]) self.assertIn("DerivationCodeSequence", instance_after["MainDicomTags"]) self.assertIn("ScanOptions", series_after["MainDicomTags"]) self.assertIn("NameOfPhysiciansReadingStudy", study_after["MainDicomTags"]) self.assertIn("PatientWeight", patient_after["MainDicomTags"]) # instance has been transcoded and we can still access the tags self.assertTrue(self.instance_metadata_before["TransferSyntax"] != instance_metadata_after["TransferSyntax"]) self.o.instances.get_tags(instance_after["ID"]) # the reception date and other metadata have not been updated self.assertEqual(self.instance_metadata_before["ReceptionDate"], instance_metadata_after["ReceptionDate"]) self.assertEqual(self.instance_metadata_before["Origin"], instance_metadata_after["Origin"]) self.assertNotEqual(self.instance_before["FileUuid"], instance_after["FileUuid"]) # files ID have changed