--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Database/Formats/Generate.sh	Mon Jun 22 14:14:37 2015 +0200
@@ -0,0 +1,37 @@
+#!/bin/bash
+
+set -e
+
+# http://gdcm.sourceforge.net/html/gdcmconv.html
+
+gdcmconv -i ../Brainix/Epi/IM-0001-0001.dcm -o JpegLossless.dcm -L
+gdcmconv -i ../Brainix/Epi/IM-0001-0001.dcm -o Jpeg.dcm -J
+gdcmconv -i ../Brainix/Epi/IM-0001-0001.dcm -o Rle.dcm -R
+
+# Generate study/series/sop instance UID++++
+dcmodify -e '(0008,0005)' -m '(0010,0020)=FromGDCM' -gin -gst -gse JpegLossless.dcm 
+dcmodify -e '(0008,0005)' -m '(0010,0020)=FromGDCM' -gin -gst -gse Jpeg.dcm 
+dcmodify -e '(0008,0005)' -m '(0010,0020)=FromGDCM' -gin -gst -gse Rle.dcm 
+
+rm -f JpegLossless.dcm.bak Jpeg.dcm.bak Rle.dcm.bak
+
+gdcmraw -t PixelData ../Brainix/Epi/IM-0001-0001.dcm PixelData.raw
+convert -define png:include-chunks=none -define png:compression-level=9 -size 256x256 -depth 16 gray:PixelData.raw Brainix.png
+
+gdcmraw -t PixelData ../KarstenHilbertRF.dcm PixelData.raw
+convert -define png:include-chunks=none -define png:compression-level=9 -size 512x464 -depth 8 gray:PixelData.raw KarstenHilbertRF.png
+
+# Decompress the multiframe image
+gdcmconv -w ../Multiframe.dcm tmp.dcm
+gdcmraw -t PixelData ./tmp.dcm PixelData.raw
+SIZE=$((512*512))
+dd if=PixelData.raw of=PixelData2.raw bs=$SIZE count=1 skip=0 &> /dev/null
+convert -define png:include-chunks=none -define png:compression-level=9 -size 512x512 -depth 8 gray:PixelData2.raw Multiframe0.png
+dd if=PixelData.raw of=PixelData2.raw bs=$SIZE count=1 skip=75 &> /dev/null
+convert -define png:include-chunks=none -define png:compression-level=9 -size 512x512 -depth 8 gray:PixelData2.raw Multiframe75.png
+
+# Decompress the signed CT image, ignoring the fact that the data is signed
+gdcmraw -t PixelData ../SignedCT.dcm PixelData.raw
+convert -define png:include-chunks=none -define png:compression-level=9 -size 512x512 -depth 16 gray:PixelData.raw SignedCT.png
+
+rm -f PixelData.raw PixelData2.raw tmp.dcm