Mercurial > hg > orthanc-tests
comparison Tests/Tests.py @ 441:21a45ddc9256
expanded test_numpy
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Sat, 27 Nov 2021 12:26:43 +0100 |
parents | 3a5222eb4c93 |
children | af57603438b3 |
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440:3a5222eb4c93 | 441:21a45ddc9256 |
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8235 def test_numpy(self): | 8235 def test_numpy(self): |
8236 # New in Orthanc 1.9.8 | 8236 # New in Orthanc 1.9.8 |
8237 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | 8237 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
8238 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | 8238 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') |
8239 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | 8239 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
8240 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] | |
8240 | 8241 |
8241 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | 8242 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) |
8242 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8243 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8243 self.assertEqual(numpy.float32, c.dtype) | 8244 self.assertEqual(numpy.float32, c.dtype) |
8244 self.assertEqual((288, 288, 1), c.shape) | 8245 self.assertEqual((288, 288, 1), c.shape) |
8246 self.assertAlmostEqual(0, c.min()) | |
8247 self.assertAlmostEqual(536, c.max()) | |
8245 | 8248 |
8246 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | 8249 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) |
8247 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8250 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8248 self.assertEqual(numpy.uint16, c.dtype) | 8251 self.assertEqual(numpy.uint16, c.dtype) |
8249 self.assertEqual((288, 288, 1), c.shape) | 8252 self.assertEqual((288, 288, 1), c.shape) |
8253 self.assertEqual(0, c.min()) | |
8254 self.assertEqual(536, c.max()) | |
8250 | 8255 |
8251 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | 8256 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) |
8252 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8257 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8253 self.assertEqual(numpy.float32, c.dtype) | 8258 self.assertEqual(numpy.float32, c.dtype) |
8254 self.assertEqual((1, 288, 288, 1), c.shape) | 8259 self.assertEqual((1, 288, 288, 1), c.shape) |
8273 | 8278 |
8274 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | 8279 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) |
8275 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8280 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8276 self.assertEqual(numpy.float32, c.dtype) | 8281 self.assertEqual(numpy.float32, c.dtype) |
8277 self.assertEqual((256, 256, 1), c.shape) | 8282 self.assertEqual((256, 256, 1), c.shape) |
8283 self.assertAlmostEqual(0, c.min()) | |
8284 self.assertAlmostEqual(0, c.max()) | |
8285 | |
8286 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) | |
8287 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8288 self.assertEqual(numpy.float32, c.dtype) | |
8289 self.assertEqual((256, 256, 1), c.shape) | |
8290 self.assertAlmostEqual(0, c.min()) | |
8291 self.assertAlmostEqual(255, c.max()) | |
8278 | 8292 |
8279 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | 8293 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) |
8280 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8294 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8281 self.assertEqual(numpy.float32, c.dtype) | 8295 self.assertEqual(numpy.float32, c.dtype) |
8282 self.assertEqual((96, 256, 256, 1), c.shape) | 8296 self.assertEqual((96, 256, 256, 1), c.shape) |
8284 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | 8298 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] |
8285 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | 8299 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) |
8286 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | 8300 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
8287 self.assertEqual(numpy.float32, c.dtype) | 8301 self.assertEqual(numpy.float32, c.dtype) |
8288 self.assertEqual((96, 256, 256, 1), c.shape) | 8302 self.assertEqual((96, 256, 256, 1), c.shape) |
8303 | |
8304 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) | |
8305 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8306 self.assertEqual(numpy.float32, c.dtype) | |
8307 self.assertEqual((512, 512, 1), c.shape) | |
8308 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image | |
8309 self.assertAlmostEqual(2374, c.max()) | |
8310 | |
8311 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) | |
8312 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
8313 self.assertEqual(numpy.int16, c.dtype) | |
8314 self.assertEqual((512, 512, 1), c.shape) | |
8315 self.assertEqual(-2000, c.min()) | |
8316 self.assertEqual(3398, c.max()) |