Mercurial > hg > orthanc-tests
annotate Tests/Tests.py @ 687:edf6ce075823
fix
| author | Alain Mazy <am@orthanc.team> |
|---|---|
| date | Tue, 10 Sep 2024 14:33:04 +0200 |
| parents | 992f0e405c4f |
| children | b58f639aee60 |
| rev | line source |
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| 22 | 1 #!/usr/bin/env python |
| 2 # -*- coding: utf-8 -*- | |
| 3 | |
| 4 | |
| 3 | 5 # Orthanc - A Lightweight, RESTful DICOM Store |
| 73 | 6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
| 3 | 7 # Department, University Hospital of Liege, Belgium |
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8 # Copyright (C) 2017-2023 Osimis S.A., Belgium |
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9 # Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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10 # Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
| 3 | 11 # |
| 12 # This program is free software: you can redistribute it and/or | |
| 13 # modify it under the terms of the GNU General Public License as | |
| 14 # published by the Free Software Foundation, either version 3 of the | |
| 15 # License, or (at your option) any later version. | |
| 16 # | |
| 17 # This program is distributed in the hope that it will be useful, but | |
| 18 # WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 19 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 20 # General Public License for more details. | |
| 21 # | |
| 22 # You should have received a copy of the GNU General Public License | |
| 23 # along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 24 | |
| 25 | |
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26 import base64 |
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27 import bz2 |
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28 import copy |
| 440 | 29 import io |
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30 import numpy |
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31 import pprint |
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32 import shutil |
| 14 | 33 import tempfile |
| 3 | 34 import unittest |
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35 import time |
| 529 | 36 import os |
| 3 | 37 |
| 11 | 38 from PIL import ImageChops |
| 3 | 39 from Toolbox import * |
| 13 | 40 from xml.dom import minidom |
| 312 | 41 from datetime import datetime |
| 3 | 42 |
| 43 _LOCAL = None | |
| 44 _REMOTE = None | |
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45 _DOCKER = False |
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46 |
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47 |
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48 def SetOrthancParameters(local, remote, withinDocker): |
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49 global _LOCAL, _REMOTE, _DOCKER |
| 3 | 50 _LOCAL = local |
| 51 _REMOTE = remote | |
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52 _DOCKER = withinDocker |
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53 |
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54 |
| 14 | 55 def ExtractDicomTags(rawDicom, tags): |
| 56 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 57 f.write(rawDicom) | |
| 58 f.flush() | |
| 45 | 59 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 14 | 60 |
| 61 result = [] | |
| 62 for tag in tags: | |
| 63 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data) | |
| 64 if match == None: | |
| 65 result.append('') | |
| 66 else: | |
| 67 result.append(match.group(1)) | |
| 68 | |
| 69 return result | |
| 70 | |
| 71 | |
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72 def CompareLists(a, b): |
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73 if len(a) != len(b): |
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74 return False |
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75 |
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76 for i in range(len(a)): |
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77 d = a[i] - b[i] |
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78 if abs(d) >= 0.51: # Add some tolerance for rounding errors |
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79 return False |
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80 |
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81 return True |
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82 |
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83 |
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84 def CompareTags(a, b, tagsToIgnore): |
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85 for i in tagsToIgnore: |
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86 if i in a: |
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87 del a[i] |
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88 if i in b: |
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89 del b[i] |
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90 |
| 123 | 91 if a.keys() == b.keys(): |
| 92 return True | |
| 93 else: | |
| 94 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys()))) | |
| 95 return False | |
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96 |
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97 |
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98 def CallFindScu(args): |
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99 p = subprocess.Popen([ FindExecutable('findscu'), |
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100 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'], |
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101 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args, |
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102 stderr=subprocess.PIPE) |
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103 return p.communicate()[1] |
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104 |
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105 |
| 142 | 106 def GetMoveScuCommand(): |
| 107 return [ | |
| 108 FindExecutable('movescu'), | |
| 109 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp) | |
| 110 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc) | |
| 111 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp) | |
| 112 _REMOTE['Server'], | |
| 113 str(_REMOTE['DicomPort']) | |
| 114 ] | |
| 115 | |
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116 |
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117 def IsDicomUntilPixelDataStored(orthanc): |
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118 # This function detects whether the "StorageCompression" option is |
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119 # "true", OR the storage area does not support read-range |
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120 |
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121 if IsOrthancVersionAbove(orthanc, 1, 9, 1): |
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122 i = UploadInstance(orthanc, 'ColorTestMalaterre.dcm') ['ID'] |
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123 a = DoGet(orthanc, '/instances/%s/metadata/PixelDataOffset' % i) |
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124 if a != 0x03a0: |
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125 raise Exception('Internal error') |
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126 |
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127 a = DoGet(orthanc, '/instances/%s/attachments' % i) |
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128 if len(a) != 1 and len(a) != 2 or not 'dicom' in a: |
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129 raise Exception('Internal error') |
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130 |
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131 DoDelete(orthanc, '/instances/%s' % i) |
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132 |
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133 if len(a) == 1: |
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134 return False |
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135 elif 'dicom-until-pixel-data' in a: |
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136 return True |
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137 else: |
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138 raise Exception('Internal error') |
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139 |
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140 else: |
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141 return False |
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142 |
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143 |
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144 def CallMoveScu(args): |
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145 try: |
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146 subprocess.check_call(GetMoveScuCommand() + args, |
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147 stderr = subprocess.PIPE) |
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148 except subprocess.CalledProcessError as e: |
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149 # The error code "69" corresponds to "EXITCODE_CMOVE_ERROR", |
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150 # that has been introduced in DCMTK 3.6.2. This error code is |
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151 # expected by some tests that try and C-MOVE non-existing |
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152 # DICOM instances. |
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153 # https://groups.google.com/d/msg/orthanc-users/DCRc5NeSCbM/DG-pSWj-BwAJ |
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154 if e.returncode != 69: |
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155 raise e |
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156 |
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157 |
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158 def GenerateTestSequence(): |
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159 return [ |
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160 { |
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161 'StudyDescription': 'Hello^', |
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162 'ReferencedStudySequence' : [ |
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163 { |
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164 'StudyDescription': 'Toto', |
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165 }, |
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166 { |
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167 'StudyDescription': 'Tata', |
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168 }, |
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169 ] |
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170 }, |
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171 { |
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172 'StudyDescription': 'Sébastien^', |
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173 'StudyDate' : '19700202', |
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174 } |
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175 ] |
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176 |
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177 |
| 3 | 178 class Orthanc(unittest.TestCase): |
| 179 def setUp(self): | |
| 83 | 180 if (sys.version_info >= (3, 0)): |
| 181 # Remove annoying warnings about unclosed socket in Python 3 | |
| 182 import warnings | |
| 183 warnings.simplefilter("ignore", ResourceWarning) | |
| 184 | |
| 508 | 185 print('running : %s' % self.id()) |
| 186 | |
| 3 | 187 DropOrthanc(_LOCAL) |
| 188 DropOrthanc(_REMOTE) | |
| 174 | 189 UninstallLuaCallbacks(_REMOTE) |
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190 |
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191 # Reset stuff possibly set by some integration tests |
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192 DoPut(_REMOTE, '/tools/default-encoding', 'Latin1') |
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193 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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194 DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ '1.2.840.10008.1.*' ]) |
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195 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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196 |
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197 for i in [ 'toto', 'tata' ]: |
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198 if i in DoGet(_REMOTE, '/modalities'): |
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199 DoDelete(_REMOTE, '/modalities/%s' % i) |
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200 if i in DoGet(_REMOTE, '/peers'): |
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201 DoDelete(_REMOTE, '/peers/%s' % i) |
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202 |
| 312 | 203 #print("%s: In test %s" % (datetime.now(), self._testMethodName)) |
|
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204 |
|
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205 def AssertSameImages(self, truth, url): |
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206 im = GetImage(_REMOTE, url) |
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207 self.assertTrue(CompareLists(truth, im.getdata())) |
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208 |
| 3 | 209 |
| 210 def test_system(self): | |
| 177 | 211 self.assertTrue('Version' in DoGet(_REMOTE, '/system')) |
| 212 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 213 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 214 | |
| 512 | 215 systemInfo = DoGet(_REMOTE, '/system') |
| 216 | |
| 471 | 217 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 512 | 218 self.assertIn("MainDicomTags", systemInfo) |
| 219 self.assertIn("Patient", systemInfo["MainDicomTags"]) | |
| 220 self.assertIn("Study", systemInfo["MainDicomTags"]) | |
| 221 self.assertIn("Series", systemInfo["MainDicomTags"]) | |
| 222 self.assertIn("Instance", systemInfo["MainDicomTags"]) | |
| 223 | |
| 224 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 225 self.assertIn("UserMetadata", systemInfo) | |
| 226 self.assertEqual(1098, systemInfo['UserMetadata']['my-metadata'] ) | |
| 227 | |
| 177 | 228 if systemInfo["Version"] == "mainline": |
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229 print("Skipping version checks since you're currently in mainline") |
| 177 | 230 return |
| 231 | |
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232 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 7): |
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233 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6)) |
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234 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7)) |
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235 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6)) |
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236 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6)) |
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237 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6)) |
| 3 | 238 |
| 456 | 239 |
| 512 | 240 |
| 3 | 241 def test_upload(self): |
| 173 | 242 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
| 243 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 244 | |
| 245 sizeDummyCT = 2472 | |
| 246 sizeOverwrite = 2476 | |
| 247 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
| 248 | |
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249 # This file has *no* pixel data => "dicom-until-pixel-data" is not created |
| 3 | 250 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
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251 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % u['ID']) != 0) |
| 183 | 252 self.assertEqual(instance, u['ID']) |
| 3 | 253 self.assertEqual('Success', u['Status']) |
| 173 | 254 |
| 183 | 255 if True: |
| 256 # New test for Orthanc 1.4.3 | |
| 257 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries']) | |
| 258 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy']) | |
| 259 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient']) | |
| 260 | |
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261 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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262 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
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263 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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264 j = 0 |
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265 else: |
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266 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-until-pixel-data' % instance)) |
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267 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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268 |
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269 if IsOrthancVersionAbove(_REMOTE, 1, 10, 0): |
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270 attachmentInfo = DoGet(_REMOTE, '/instances/%s/attachments/dicom/info' % instance) |
| 447 | 271 |
| 272 if isCompressed: | |
| 273 self.assertGreater(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 274 else: | |
| 275 self.assertEqual(sizeDummyCT, attachmentInfo['CompressedSize']) | |
| 276 | |
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277 self.assertEqual(sizeDummyCT, attachmentInfo['UncompressedSize']) |
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278 self.assertIn('Uuid', attachmentInfo) |
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279 self.assertEqual(1, attachmentInfo['ContentType']) |
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280 |
| 173 | 281 s = sizeDummyCT + j |
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282 |
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283 if isCompressed: |
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284 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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285 else: |
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286 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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287 |
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288 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 289 |
| 3 | 290 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 291 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 292 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 293 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 294 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
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295 |
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296 if isCompressed: |
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297 self.assertGreater(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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298 else: |
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299 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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300 |
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301 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 302 |
| 303 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) | |
| 3 | 304 self.assertEqual('20070101', i['StudyDate']) |
| 173 | 305 self.assertEqual('KNIX', i['PatientName']) |
| 306 | |
| 307 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 308 # Overwriting | |
| 309 self.assertEqual('Success', u['Status']) | |
| 310 else: | |
| 311 self.assertEqual('AlreadyStored', u['Status']) | |
| 312 | |
| 313 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm') | |
| 314 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 315 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 316 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 317 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 318 | |
| 319 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2): | |
| 320 # Overwriting | |
| 321 self.assertEqual('Success', u['Status']) | |
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322 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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323 j2 = 0 |
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324 else: |
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325 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance)) |
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326 self.assertNotEqual(j, j2) |
| 173 | 327 s2 = sizeOverwrite + j2 |
| 328 self.assertNotEqual(s, s2) | |
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329 if isCompressed: |
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330 self.assertGreater(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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331 else: |
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332 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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333 |
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334 self.assertEqual(s2, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 173 | 335 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance) |
| 336 self.assertEqual('ANOTHER', i['PatientName']) | |
| 337 else: | |
| 338 self.assertEqual('AlreadyStored', u['Status']) | |
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339 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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340 self.assertEqual(s, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 3 | 341 |
| 5 | 342 def test_upload_2(self): |
| 3 | 343 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 344 instance = DoGet(_REMOTE, '/instances/%s' % i) | |
| 345 self.assertEqual(i, instance['ID']) | |
| 346 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 347 instance['MainDicomTags']['SOPInstanceUID']) | |
| 348 | |
| 349 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries']) | |
| 350 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 351 series['MainDicomTags']['SeriesInstanceUID']) | |
| 352 | |
| 353 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy']) | |
| 354 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 355 study['MainDicomTags']['StudyInstanceUID']) | |
| 356 | |
| 357 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient']) | |
| 358 self.assertEqual('ozp00SjY2xG', | |
| 359 patient['MainDicomTags']['PatientID']) | |
| 360 | |
| 361 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID']) | |
| 362 self.assertEqual(2472, len(dicom)) | |
| 363 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom)) | |
| 364 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 365 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName']) | |
| 366 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value']) | |
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367 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName']) |
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368 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010']) |
| 3 | 369 |
| 370 | |
| 5 | 371 def test_images(self): |
| 372 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] | |
| 373 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 3 | 374 |
| 5 | 375 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
| 376 self.assertEqual("L", im.mode) | |
| 377 self.assertEqual(512, im.size[0]) | |
| 378 self.assertEqual(358, im.size[1]) | |
| 379 | |
| 380 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i) | |
| 381 self.assertEqual("L", im.mode) | |
| 382 self.assertEqual(512, im.size[0]) | |
| 383 self.assertEqual(358, im.size[1]) | |
| 384 | |
| 385 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i) | |
| 386 self.assertEqual(512, im.size[0]) | |
| 387 self.assertEqual(358, im.size[1]) | |
| 388 | |
| 389 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 390 self.assertEqual("L", im.mode) | |
| 391 self.assertEqual(512, im.size[0]) | |
| 392 self.assertEqual(358, im.size[1]) | |
| 393 | |
| 394 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 395 self.assertEqual("L", im.mode) | |
| 396 self.assertEqual(512, im.size[0]) | |
| 397 self.assertEqual(358, im.size[1]) | |
| 398 | |
| 399 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 400 self.assertEqual(512, im.size[0]) | |
| 401 self.assertEqual(358, im.size[1]) | |
| 64 | 402 |
| 403 # This is Little Endian Explicit | |
| 404 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) | |
| 405 | |
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406 def test_images_implicit_vr(self): |
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407 if IsOrthancVersionAbove(_REMOTE, 1, 10, 2): |
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408 i = UploadInstance(_REMOTE, 'Implicit-vr-us-palette.dcm')['ID'] |
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409 |
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410 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
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411 self.assertEqual("RGB", im.mode) |
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412 self.assertEqual(800, im.size[0]) |
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413 self.assertEqual(600, im.size[1]) |
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414 |
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415 |
| 6 | 416 def test_hierarchy(self): |
| 417 UploadFolder(_REMOTE, 'Brainix/Epi') | |
| 418 UploadFolder(_REMOTE, 'Brainix/Flair') | |
| 419 UploadFolder(_REMOTE, 'Knee/T1') | |
| 420 UploadFolder(_REMOTE, 'Knee/T2') | |
| 421 | |
| 422 p = DoGet(_REMOTE, '/patients') | |
| 423 s = DoGet(_REMOTE, '/studies') | |
| 424 t = DoGet(_REMOTE, '/series') | |
| 425 self.assertEqual(2, len(p)) | |
| 426 self.assertEqual(2, len(s)) | |
| 427 self.assertEqual(4, len(t)) | |
| 428 self.assertEqual(94, len(DoGet(_REMOTE, '/instances'))) | |
| 429 | |
| 430 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 431 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 432 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 433 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 434 | |
| 435 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' | |
| 436 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' | |
| 437 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 438 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 439 | |
| 440 self.assertTrue(brainixPatient in p) | |
| 441 self.assertTrue(kneePatient in p) | |
| 442 self.assertTrue(brainixStudy in s) | |
| 443 self.assertTrue(kneeStudy in s) | |
| 444 self.assertTrue(brainixEpi in t) | |
| 445 self.assertTrue(brainixFlair in t) | |
| 446 self.assertTrue(kneeT1 in t) | |
| 447 self.assertTrue(kneeT2 in t) | |
| 448 | |
| 449 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient))) | |
| 450 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient))) | |
| 451 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient))) | |
| 452 | |
| 453 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient))) | |
| 454 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient))) | |
| 455 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient))) | |
| 456 | |
| 457 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy))) | |
| 458 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy))) | |
| 459 | |
| 460 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy))) | |
| 461 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy))) | |
| 462 | |
| 463 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi))) | |
| 464 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair))) | |
| 465 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1))) | |
| 466 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2))) | |
| 467 | |
| 468 for patient in p: | |
| 469 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient): | |
| 470 self.assertEqual(patient, study['ParentPatient']) | |
| 471 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']): | |
| 472 self.assertEqual(study['ID'], series['ParentStudy']) | |
| 211 | 473 self.assertEqual('Unknown', series['Status']) |
| 6 | 474 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']): |
| 475 self.assertEqual(series['ID'], instance['ParentSeries']) | |
| 476 | |
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477 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
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478 # The "dicom-as-json" attachment was removed in Orthanc 1.9.1 |
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479 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])), |
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480 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID']))) |
| 6 | 481 |
| 482 | |
| 483 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor'] | |
| 484 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 485 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 486 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 487 self.assertEqual(50, len(DoGet(_REMOTE, '/instances'))) | |
| 488 self.assertEqual(None, r) | |
| 489 | |
| 490 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor'] | |
| 491 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 492 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 493 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 494 self.assertEqual(24, len(DoGet(_REMOTE, '/instances'))) | |
| 495 self.assertEqual('Study', r['Type']) | |
| 496 self.assertEqual(kneeStudy, r['ID']) | |
| 497 | |
| 498 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor'] | |
| 499 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 500 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 501 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 502 self.assertEqual(23, len(DoGet(_REMOTE, '/instances'))) | |
| 503 self.assertEqual('Series', r['Type']) | |
| 504 self.assertEqual(kneeT1, r['ID']) | |
| 505 | |
| 506 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor'] | |
| 507 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 508 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) | |
| 509 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) | |
| 510 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 511 self.assertEqual(None, r) | |
| 512 | |
| 513 DropOrthanc(_REMOTE) | |
| 514 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize']) | |
| 515 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) | |
| 7 | 516 |
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517 def test_delete_cascade(self): |
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518 # make sure deleting the last instance of a study deletes the series, study and patient |
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519 |
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520 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test |
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521 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
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522 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
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523 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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524 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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525 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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526 |
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527 DoDelete(_REMOTE, '/instances/%s' % a) |
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528 |
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529 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
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530 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
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531 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
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532 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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533 |
| 7 | 534 |
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535 def test_multiframe(self): |
| 7 | 536 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
| 537 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i))) | |
| 538 | |
| 539 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i) | |
| 540 self.assertEqual("L", im.mode) | |
| 541 self.assertEqual(512, im.size[0]) | |
| 542 self.assertEqual(512, im.size[1]) | |
| 543 | |
| 544 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i) | |
| 545 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i) | |
| 546 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i) | |
| 547 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i)) | |
| 548 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i)) | |
| 549 | |
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550 |
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551 def test_changes(self): |
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552 # Check emptiness |
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553 c = DoGet(_REMOTE, '/changes') |
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554 self.assertEqual(0, len(c['Changes'])) |
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555 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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556 self.assertTrue(c['Done']) |
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557 c = DoGet(_REMOTE, '/changes?last') |
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558 self.assertEqual(0, len(c['Changes'])) |
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559 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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560 self.assertTrue(c['Done']) |
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561 |
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562 # Add 1 instance |
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563 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
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564 c = DoGet(_REMOTE, '/changes') |
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565 begin = c['Last'] |
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566 self.assertEqual(4, len(c['Changes'])) |
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567 self.assertTrue(c['Done']) |
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568 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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569 |
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570 # Check the order in which the creation events are reported |
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571 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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572 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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573 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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574 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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575 |
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576 c = DoGet(_REMOTE, '/changes?last') |
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577 self.assertEqual(1, len(c['Changes'])) |
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578 self.assertEqual(begin, c['Last']) |
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579 self.assertTrue(c['Done']) |
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580 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1)) |
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581 self.assertEqual(1, len(c['Changes'])) |
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582 self.assertEqual(begin, c['Last']) |
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583 self.assertTrue(c['Done']) |
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584 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2)) |
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585 self.assertEqual(1, len(c['Changes'])) |
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586 self.assertEqual(begin - 1, c['Last']) |
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587 self.assertFalse(c['Done']) |
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588 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3)) |
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589 self.assertEqual(1, len(c['Changes'])) |
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590 self.assertEqual(begin - 2, c['Last']) |
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591 self.assertFalse(c['Done']) |
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592 |
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593 UploadFolder(_REMOTE, 'Knee/T1') |
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594 UploadFolder(_REMOTE, 'Knee/T2') |
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595 since = begin |
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596 countPatients = 0 |
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597 countStudies = 0 |
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598 countSeries = 0 |
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599 countInstances = 0 |
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600 completed = 0 |
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601 while True: |
| 530 | 602 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 1000 }) |
|
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603 since = c['Last'] |
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604 for i in c['Changes']: |
| 530 | 605 # We have set StableAge to 1 -> we might have StabeStudy but this is not sure -> detect only the 'New' events |
| 606 | |
| 607 if i['ResourceType'] == 'Instance' and i['ChangeType'] == 'NewInstance': | |
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608 countInstances += 1 |
| 530 | 609 if i['ResourceType'] == 'Patient' and i['ChangeType'] == 'NewPatient': |
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610 countPatients += 1 |
| 530 | 611 if i['ResourceType'] == 'Study' and i['ChangeType'] == 'NewStudy': |
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612 countStudies += 1 |
| 530 | 613 if i['ResourceType'] == 'Series' and i['ChangeType'] == 'NewSeries': |
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614 countSeries += 1 |
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615 if i['ChangeType'] == 'CompletedSeries': |
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616 completed += 1 |
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617 self.assertTrue('ID' in i) |
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618 self.assertTrue('Path' in i) |
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619 self.assertTrue('Seq' in i) |
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620 if c['Done']: |
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621 break |
| 530 | 622 # we count only the events since before the upload of 2 Knee series ! |
| 623 self.assertEqual(50, countInstances) | |
| 624 self.assertEqual(1, countPatients) | |
| 625 self.assertEqual(1, countStudies) | |
| 626 self.assertEqual(2, countSeries) | |
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627 self.assertEqual(0, completed) |
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628 |
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629 |
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630 def test_changes_extended(self): |
| 681 | 631 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5) and DoGet(_REMOTE, '/system').get("Capabilities") and DoGet(_REMOTE, '/system').get("Capabilities").get("HasExtendedChanges"): |
|
644
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632 # Check emptiness |
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633 c = DoGet(_REMOTE, '/changes') |
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634 self.assertEqual(0, len(c['Changes'])) |
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635 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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636 self.assertTrue(c['Done']) |
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637 c = DoGet(_REMOTE, '/changes?last') |
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638 self.assertEqual(0, len(c['Changes'])) |
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639 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2 |
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640 self.assertTrue(c['Done']) |
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641 |
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642 # Add 1 instance |
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643 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
677
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644 c = DoGet(_REMOTE, '/changes') |
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645 begin = c['Last'] |
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646 self.assertEqual(4, len(c['Changes'])) |
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647 self.assertTrue(c['Done']) |
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648 self.assertEqual(c['Changes'][-1]['Seq'], c['Last']) |
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649 |
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650 # Check the order in which the creation events are reported |
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651 self.assertEqual(c['Changes'][0]['ChangeType'], 'NewInstance') |
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652 self.assertEqual(c['Changes'][1]['ChangeType'], 'NewSeries') |
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653 self.assertEqual(c['Changes'][2]['ChangeType'], 'NewStudy') |
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654 self.assertEqual(c['Changes'][3]['ChangeType'], 'NewPatient') |
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655 |
|
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656 c = DoGet(_REMOTE, '/changes?type=NewInstance') |
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657 self.assertEqual(1, len(c['Changes'])) |
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658 self.assertEqual(begin-3, c['Last']) |
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659 |
|
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660 c = DoGet(_REMOTE, '/changes?type=NewPatient') |
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661 self.assertEqual(1, len(c['Changes'])) |
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662 self.assertEqual(begin, c['Last']) |
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663 |
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664 UploadFolder(_REMOTE, 'Knee/T1') |
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665 UploadFolder(_REMOTE, 'Knee/T2') |
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666 |
|
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667 # Request the 1000 first NewInstance changes -> all 50 shall be reported |
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668 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'limit' : 1000 }) |
|
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669 self.assertEqual(50, len(c['Changes'])) |
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670 self.assertLess(begin, c['Changes'][0]['Seq']) |
|
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671 self.assertTrue(c['Done']) #w e have got them all so it's DONE |
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672 lastFrom1000NewInstances = c['Last'] |
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673 firstFrom1000NewInstances = c['First'] |
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674 self.assertLess(firstFrom1000NewInstances, lastFrom1000NewInstances) |
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675 |
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676 # Only the 10 first NewInstance changes -> only 10 shall be reported |
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677 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'limit' : 10 }) |
|
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678 self.assertEqual(10, len(c['Changes'])) |
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679 self.assertFalse(c['Done']) |
|
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680 lastFrom10firstNewInstances = c['Last'] |
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681 firstFrom10firstNewInstances = c['First'] |
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682 self.assertLess(firstFrom10firstNewInstances, lastFrom10firstNewInstances) |
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683 self.assertLess(lastFrom10firstNewInstances, lastFrom1000NewInstances) |
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684 self.assertEqual(firstFrom10firstNewInstances, firstFrom1000NewInstances) |
|
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|
685 |
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686 # between begin and begin+10 with a max of 10 and a filter -> less than 10 NewInstance since there are other changes in this range |
|
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687 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'since' : begin, 'to': begin+10, 'limit' : 10 }) |
|
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688 self.assertLess(len(c['Changes']), 10) |
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689 self.assertTrue(c['Done']) # we have received ALL NewInstance that are between since and to so we consider it's done |
|
677
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690 lastFrom10SubsetNewInstances = c['Last'] |
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691 firstFrom10SubsetNewInstances = c['First'] |
|
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692 self.assertLess(firstFrom10SubsetNewInstances, lastFrom10SubsetNewInstances) |
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693 self.assertLess(lastFrom10SubsetNewInstances, lastFrom10firstNewInstances) |
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694 self.assertEqual(firstFrom10SubsetNewInstances, firstFrom1000NewInstances) |
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|
695 |
|
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|
696 # test with only 'to' -> all 50 NewInstance shall be reported |
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697 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'to': lastFrom1000NewInstances, 'limit' : 50 }) |
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698 self.assertEqual(lastFrom1000NewInstances, c['Changes'][-1]['Seq']) |
|
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|
699 self.assertEqual(50, len(c['Changes'])) |
|
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700 self.assertFalse(c['Done']) # Done can not be used when working in reverse direction |
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|
701 lastFrom50Reverse = c['Last'] |
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|
702 firstFrom50Reverse = c['First'] |
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|
703 self.assertLess(firstFrom50Reverse, lastFrom50Reverse) |
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704 self.assertEqual(lastFrom50Reverse, lastFrom1000NewInstances) |
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705 self.assertEqual(firstFrom50Reverse, firstFrom1000NewInstances) |
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|
706 |
|
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|
707 # test with only 'to' and limit to 10 NewInstance changes |
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|
708 c = DoGet(_REMOTE, '/changes', { 'type': 'NewInstance', 'to': lastFrom1000NewInstances, 'limit' : 10 }) |
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709 self.assertEqual(lastFrom1000NewInstances, c['Changes'][-1]['Seq']) |
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710 self.assertEqual(10, len(c['Changes'])) |
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|
711 self.assertFalse(c['Done']) # Done can not be used when working in reverse direction |
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|
712 lastFrom10Reverse = c['Last'] |
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|
713 firstFrom10Reverse = c['First'] |
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|
714 self.assertLess(firstFrom10Reverse, lastFrom10Reverse) |
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715 self.assertEqual(lastFrom10Reverse, lastFrom1000NewInstances) |
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716 self.assertLessEqual(firstFrom50Reverse, firstFrom10Reverse) |
|
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717 |
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|
718 |
|
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|
719 def test_archive(self): |
|
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720 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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721 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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722 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
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723 kneeStudy = DoGet(_REMOTE, '/studies')[0] |
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724 kneeSeries = DoGet(_REMOTE, '/series')[0] |
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|
725 |
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|
726 z = GetArchive(_REMOTE, '/patients/%s/archive' % kneePatient) |
|
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727 self.assertEqual(2, len(z.namelist())) |
|
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728 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
729 |
|
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|
730 z = GetArchive(_REMOTE, '/studies/%s/archive' % kneeStudy) |
|
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|
731 self.assertEqual(2, len(z.namelist())) |
|
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732 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
733 |
|
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|
734 z = GetArchive(_REMOTE, '/series/%s/archive' % kneeSeries) |
|
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|
735 self.assertEqual(1, len(z.namelist())) |
|
583
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|
736 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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|
737 |
|
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|
738 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
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|
739 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' |
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|
740 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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|
741 |
|
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|
742 z = GetArchive(_REMOTE, '/patients/%s/archive' % kneePatient) |
|
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|
743 self.assertEqual(2, len(z.namelist())) |
| 192 | 744 |
|
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|
745 # archive with 2 patients |
| 192 | 746 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
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|
747 'Resources' : [ brainixPatient, kneePatient ] |
| 192 | 748 }) |
| 749 self.assertEqual(3, len(z.namelist())) | |
|
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|
750 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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|
751 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
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|
752 |
|
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changeset
|
753 z = PostArchive(_REMOTE, '/patients/%s/archive' % kneePatient, { |
|
403
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|
754 'Synchronous' : True |
|
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|
755 }) |
|
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changeset
|
756 self.assertEqual(2, len(z.namelist())) |
|
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changeset
|
757 |
|
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changeset
|
758 # archive with 2 studies |
|
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|
759 z = PostArchive(_REMOTE, '/tools/create-archive', { |
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|
760 'Resources' : [ brainixStudy, kneeStudy ] |
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|
761 }) |
|
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changeset
|
762 self.assertEqual(3, len(z.namelist())) |
|
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|
763 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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changeset
|
764 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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changeset
|
765 |
|
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|
766 # archive with 1 patient & 1 study |
|
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|
767 z = PostArchive(_REMOTE, '/tools/create-archive', { |
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changeset
|
768 'Resources' : [ brainixPatient, kneeStudy ] |
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|
769 }) |
|
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|
770 self.assertEqual(3, len(z.namelist())) |
|
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|
771 self.assertIn('5Yp0E BRAINIX/0 IRM crbrale neurocrne/MR sT2WFLAIR/MR000000.dcm', z.namelist()) |
|
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changeset
|
772 self.assertIn('887 KNEE/A10003245599 IRM DU GENOU/MR T1W_aTSE/MR000000.dcm', z.namelist()) |
|
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diff
changeset
|
773 |
|
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parents:
573
diff
changeset
|
774 |
|
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changeset
|
775 def test_archive_with_patient_ids_collision(self): |
|
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|
776 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
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|
777 # one PatientID: COMMON |
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|
778 # 2 PatientName: HELLO & WORLD |
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changeset
|
779 |
|
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|
780 hello = UploadInstance(_REMOTE, 'PatientIdsCollision/Image1.dcm') |
|
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|
781 world = UploadInstance(_REMOTE, 'PatientIdsCollision/Image2.dcm') |
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|
782 helloStudy = hello['ParentStudy'] |
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|
783 worldStudy = world['ParentStudy'] |
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|
784 helloPatient = hello['ParentPatient'] |
|
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|
785 worldPatient = world['ParentPatient'] |
|
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changeset
|
786 |
|
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changeset
|
787 self.assertEqual(helloPatient, worldPatient) |
|
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diff
changeset
|
788 |
|
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changeset
|
789 # when downloading the Patient, we do not really know what PatientName we will get in the zip |
|
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|
790 z = GetArchive(_REMOTE, '/patients/%s/archive' % helloPatient) |
|
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changeset
|
791 self.assertEqual(2, len(z.namelist())) |
|
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diff
changeset
|
792 |
|
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diff
changeset
|
793 # when downloading studies individually, we want to have the PatientName that appears in the study |
|
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changeset
|
794 z = GetArchive(_REMOTE, '/studies/%s/archive' % helloStudy) |
|
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changeset
|
795 self.assertEqual(1, len(z.namelist())) |
|
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|
796 self.assertIn('COMMON HELLO/HELLO SERIES/Unknown Series/00000000.dcm', z.namelist()) |
|
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changeset
|
797 |
|
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diff
changeset
|
798 z = GetArchive(_REMOTE, '/studies/%s/archive' % worldStudy) |
|
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changeset
|
799 self.assertEqual(1, len(z.namelist())) |
|
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|
800 self.assertIn('COMMON WORLD/WORLD SERIES/Unknown Series/00000000.dcm', z.namelist()) |
|
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diff
changeset
|
801 |
|
615201c822d8
new test for PatientName used when exporting an archive
Alain Mazy <am@osimis.io>
parents:
573
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changeset
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802 |
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8
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
803 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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804 def test_media_archive(self): |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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805 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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806 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
807 |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
808 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0]) |
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809 self.assertEqual(3, len(z.namelist())) |
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parents:
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diff
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810 self.assertTrue('IMAGES/IM0' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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811 self.assertTrue('IMAGES/IM1' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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812 self.assertTrue('DICOMDIR' in z.namelist()) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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813 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
814 try: |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
815 os.remove('/tmp/DICOMDIR') |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
816 except: |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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changeset
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817 # The file does not exist |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
818 pass |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
819 |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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820 z.extract('DICOMDIR', '/tmp') |
| 45 | 821 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
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8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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822 stderr = subprocess.STDOUT).split('\n') |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
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823 self.assertEqual(3, len(a)) |
|
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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824 self.assertTrue(a[0].startswith('Warning')) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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825 self.assertEqual('BasicDirectory', a[1]) |
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f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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|
826 self.assertEqual('', a[2]) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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827 |
| 45 | 828 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
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8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
829 stderr = subprocess.STDOUT).split('\n') |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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830 self.assertEqual(1, len(a)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
831 self.assertEqual('', a[0]) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
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832 |
| 45 | 833 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
8
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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834 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
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test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
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835 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None) |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
836 |
|
f8d781d1d267
test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
7
diff
changeset
|
837 os.remove('/tmp/DICOMDIR') |
| 10 | 838 |
| 839 | |
| 840 def test_protection(self): | |
| 841 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 842 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 843 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 844 a = DoGet(_REMOTE, '/patients')[0] | |
| 845 b = DoGet(_REMOTE, '/patients')[1] | |
| 846 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 847 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 848 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 849 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain') | |
| 850 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 851 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain') | |
| 852 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 853 | |
| 854 | |
| 12 | 855 def test_raw_tags(self): |
| 10 | 856 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
| 857 | |
| 858 dicom = DoGet(_REMOTE, '/instances/%s/file' % i) | |
| 859 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom)) | |
| 860 | |
| 861 s = '/instances/%s/content/' % i | |
| 862 | |
| 863 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip()) | |
| 864 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011')) | |
| 865 | |
| 866 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip()) | |
| 867 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip()) | |
| 868 | |
| 869 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 870 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 871 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 872 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 873 | |
| 874 for i in DoGet(_REMOTE, '/instances'): | |
| 875 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID'] | |
| 876 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), '')) | |
| 877 | |
| 878 | |
| 879 def test_raw_tags_mdn(self): | |
| 880 # Bug reported by Cyril Paulus | |
| 881 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 882 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i)) | |
| 883 | |
| 884 | |
| 885 def test_modify_instance(self): | |
| 886 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] | |
| 887 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, | |
| 888 json.dumps({ | |
| 889 "Replace" : { | |
| 890 "PatientName" : "hello", | |
| 891 #"PatientID" : "world" | |
| 892 }, | |
| 893 "Remove" : [ "StationName" ], | |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
894 "RemovePrivateTags" : True |
| 10 | 895 }), |
| 896 'application/json') | |
| 897 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] | |
| 898 | |
| 899 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 900 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip()) | |
| 83 | 901 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip()) |
| 10 | 902 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag |
| 903 | |
| 904 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 905 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip()) | |
| 906 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)) | |
| 907 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j)) | |
| 908 | |
| 909 | |
| 910 def test_modify_series(self): | |
| 911 # Upload 4 images from the same series | |
| 912 for i in range(4): | |
| 913 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 914 | |
| 915 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 916 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries, | |
| 917 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 918 'application/json')['ID'] | |
| 919 | |
| 920 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom']) | |
| 921 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 922 self.assertEqual(4, len(instances)) | |
| 923 for i in instances: | |
| 924 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 925 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 926 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 927 | |
| 928 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 929 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 930 | |
| 931 | |
| 932 def test_modify_study(self): | |
| 933 # Upload 4 images from the 2 series of the same study | |
| 934 for i in range(4): | |
| 935 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 936 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 937 | |
| 938 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 939 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, | |
| 940 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 941 'application/json')['ID'] | |
| 942 | |
| 943 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom']) | |
| 944 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 945 self.assertEqual(2, len(series)) | |
| 946 for s in series: | |
| 947 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom'] | |
| 948 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 949 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 950 | |
| 951 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 952 for i in instances: | |
| 953 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom'] | |
| 954 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 955 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 956 | |
| 957 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 958 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 959 | |
| 960 | |
| 961 def test_anonymize_series(self): | |
| 962 # Upload 4 images from the same series | |
| 963 for i in range(4): | |
| 964 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 965 | |
| 966 origSeries = DoGet(_REMOTE, '/series')[0] | |
| 967 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries, | |
| 968 '{}', | |
| 969 'application/json')['ID'] | |
| 970 | |
| 971 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom']) | |
| 972 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances'] | |
| 973 self.assertEqual(4, len(instances)) | |
| 974 for i in instances: | |
| 975 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 976 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 977 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 978 | |
| 979 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j) | |
| 980 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i)) | |
| 981 | |
| 982 | |
| 983 def test_anonymize_study(self): | |
| 984 # Upload 4 images from the 2 series of the same study | |
| 985 for i in range(4): | |
| 986 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 987 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 988 | |
| 989 origStudy = DoGet(_REMOTE, '/studies')[0] | |
| 990 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy, | |
| 991 '{"Replace":{"PatientName":"Jodogne"}}', | |
| 992 'application/json')['ID'] | |
| 993 | |
| 994 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom']) | |
| 995 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series'] | |
| 996 self.assertEqual(2, len(series)) | |
| 997 for s in series: | |
| 998 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom'] | |
| 999 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy']) | |
| 1000 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy']) | |
| 1001 | |
| 1002 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances'] | |
| 1003 for i in instances: | |
| 1004 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom'] | |
| 1005 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']) | |
| 1006 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries']) | |
| 1007 | |
| 1008 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip()) | |
| 1009 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip()) | |
| 11 | 1010 |
| 1011 | |
| 1012 | |
| 1013 def test_storescu(self): | |
| 1014 # Check emptiness | |
| 1015 e = DoGet(_REMOTE, '/exports') | |
| 1016 self.assertEqual(0, len(e['Exports'])) | |
| 1017 self.assertEqual(0, e['Last']) | |
| 1018 self.assertTrue(e['Done']) | |
| 1019 e = DoGet(_REMOTE, '/exports?last') | |
| 1020 self.assertEqual(0, len(e['Exports'])) | |
| 1021 self.assertEqual(0, e['Last']) | |
| 1022 self.assertTrue(e['Done']) | |
| 1023 | |
| 1024 # Add 1 instance | |
| 1025 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1026 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1027 | |
| 1028 # Export the instance | |
| 1029 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance | |
| 1030 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1031 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 1032 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 1033 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 1034 | |
| 1035 e = DoGet(_REMOTE, '/exports') | |
| 1036 self.assertEqual(1, len(e['Exports'])) | |
| 1037 self.assertTrue(e['Done']) | |
| 1038 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1039 e = DoGet(_REMOTE, '/exports?limit=1') | |
| 1040 self.assertEqual(1, len(e['Exports'])) | |
| 1041 self.assertTrue(e['Done']) | |
| 1042 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1043 e = DoGet(_REMOTE, '/exports?last') | |
| 1044 self.assertEqual(1, len(e['Exports'])) | |
| 1045 self.assertTrue(e['Done']) | |
| 1046 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1047 seqInstance = e['Last'] | |
| 1048 | |
| 1049 # Export the series | |
| 1050 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain') | |
| 1051 | |
| 1052 e = DoGet(_REMOTE, '/exports') | |
| 1053 self.assertEqual(2, len(e['Exports'])) | |
| 1054 self.assertTrue(e['Done']) | |
| 1055 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1056 seqSeries = e['Last'] | |
| 1057 self.assertNotEqual(seqInstance, seqSeries) | |
| 1058 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 1059 self.assertEqual(1, len(e['Exports'])) | |
| 1060 self.assertFalse(e['Done']) | |
| 1061 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 1062 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 1063 self.assertEqual(1, len(e['Exports'])) | |
| 1064 self.assertTrue(e['Done']) | |
| 1065 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1066 e = DoGet(_REMOTE, '/exports?last') | |
| 1067 self.assertEqual(1, len(e['Exports'])) | |
| 1068 self.assertTrue(e['Done']) | |
| 1069 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1070 | |
| 1071 # Export the study | |
| 1072 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain') | |
| 1073 seqStudy = DoGet(_REMOTE, '/exports')['Last'] | |
| 1074 | |
| 1075 # Export the patient | |
| 1076 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain') | |
| 1077 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1078 self.assertEqual(1, len(DoGet(_LOCAL, '/studies'))) | |
| 1079 self.assertEqual(1, len(DoGet(_LOCAL, '/series'))) | |
| 1080 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 1081 | |
| 1082 e = DoGet(_REMOTE, '/exports') | |
| 1083 self.assertEqual(4, len(e['Exports'])) | |
| 1084 self.assertTrue(e['Done']) | |
| 1085 self.assertEqual(e['Exports'][-1]['Seq'], e['Last']) | |
| 1086 seqPatient = e['Last'] | |
| 1087 self.assertNotEqual(seqInstance, seqSeries) | |
| 1088 self.assertNotEqual(seqSeries, seqStudy) | |
| 1089 self.assertNotEqual(seqStudy, seqPatient) | |
| 1090 self.assertTrue(seqInstance < seqSeries) | |
| 1091 self.assertTrue(seqSeries < seqStudy) | |
| 1092 self.assertTrue(seqStudy < seqPatient) | |
| 1093 e = DoGet(_REMOTE, '/exports?limit=1&since=0') | |
| 1094 self.assertEqual(1, len(e['Exports'])) | |
| 1095 self.assertFalse(e['Done']) | |
| 1096 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance) | |
| 1097 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance)) | |
| 1098 self.assertEqual(1, len(e['Exports'])) | |
| 1099 self.assertFalse(e['Done']) | |
| 1100 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries) | |
| 1101 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries)) | |
| 1102 self.assertEqual(1, len(e['Exports'])) | |
| 1103 self.assertFalse(e['Done']) | |
| 1104 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy) | |
| 1105 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy)) | |
| 1106 self.assertEqual(1, len(e['Exports'])) | |
| 1107 self.assertTrue(e['Done']) | |
| 1108 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 1109 e = DoGet(_REMOTE, '/exports?last') | |
| 1110 self.assertEqual(1, len(e['Exports'])) | |
| 1111 self.assertTrue(e['Done']) | |
| 1112 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient) | |
| 1113 | |
| 1114 | |
| 1115 # Check the content of the logged information | |
| 1116 e = DoGet(_REMOTE, '/exports')['Exports'] | |
| 1117 | |
| 1118 if 'PatientID' in e[0]: | |
| 1119 # Since Orthanc 0.8.6 | |
| 1120 patient = 'PatientID' | |
| 1121 study = 'StudyInstanceUID' | |
| 1122 series = 'SeriesInstanceUID' | |
| 1123 instance = 'SOPInstanceUID' | |
| 1124 else: | |
| 1125 # Up to Orthanc 0.8.5 | |
| 1126 patient = 'PatientId' | |
| 1127 study = 'StudyInstanceUid' | |
| 1128 series = 'SeriesInstanceUid' | |
| 1129 instance = 'SopInstanceUid' | |
| 1130 | |
| 1131 for k in range(4): | |
| 1132 self.assertTrue('Date' in e[k]) | |
| 1133 self.assertTrue('Seq' in e[k]) | |
| 1134 self.assertEqual('orthanctest', e[k]['RemoteModality']) | |
| 1135 | |
| 1136 self.assertEqual(10, len(e[0])) | |
| 1137 self.assertEqual('Instance', e[0]['ResourceType']) | |
| 1138 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID']) | |
| 1139 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path']) | |
| 1140 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance]) | |
| 1141 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series]) | |
| 1142 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study]) | |
| 1143 self.assertEqual('ozp00SjY2xG', e[0][patient]) | |
| 1144 | |
| 1145 self.assertEqual(9, len(e[1])) | |
| 1146 self.assertEqual('Series', e[1]['ResourceType']) | |
| 1147 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID']) | |
| 1148 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path']) | |
| 1149 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series]) | |
| 1150 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study]) | |
| 1151 self.assertEqual('ozp00SjY2xG', e[1][patient]) | |
| 1152 | |
| 1153 self.assertEqual(8, len(e[2])) | |
| 1154 self.assertEqual('Study', e[2]['ResourceType']) | |
| 1155 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID']) | |
| 1156 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path']) | |
| 1157 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study]) | |
| 1158 self.assertEqual('ozp00SjY2xG', e[2][patient]) | |
| 1159 | |
| 1160 self.assertEqual(7, len(e[3])) | |
| 1161 self.assertEqual('Patient', e[3]['ResourceType']) | |
| 1162 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID']) | |
| 1163 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path']) | |
| 1164 self.assertEqual('ozp00SjY2xG', e[3][patient]) | |
| 1165 | |
| 1166 DropOrthanc(_REMOTE) | |
| 1167 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1168 | |
| 1169 | |
| 1170 def test_store_peer(self): | |
| 1171 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) | |
| 1172 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1173 | |
| 1174 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1175 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1176 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1177 | |
| 1178 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain') | |
| 1179 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1180 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1181 | |
| 1182 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1183 | |
| 1184 DropOrthanc(_REMOTE) | |
| 1185 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) | |
| 1186 | |
| 1187 | |
| 1188 def test_bulk_storescu(self): | |
| 1189 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1190 | |
| 1191 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1192 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 1193 | |
| 1194 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json') | |
| 1195 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1196 | |
| 1197 DropOrthanc(_LOCAL) | |
| 1198 | |
| 1199 # Send using patient's UUID | |
| 1200 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 1201 j = DoPost(_REMOTE, '/modalities/orthanctest/store', | |
| 1202 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json') | |
| 1203 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) | |
| 1204 | |
| 1205 | |
| 1206 def test_color(self): | |
| 1207 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 1208 im = GetImage(_REMOTE, '/instances/%s/preview' % i) | |
| 1209 self.assertEqual("RGB", im.mode) | |
| 1210 self.assertEqual(41, im.size[0]) | |
| 1211 self.assertEqual(41, im.size[1]) | |
| 1212 | |
| 1213 # http://effbot.org/zone/pil-comparing-images.htm | |
| 13 | 1214 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) |
| 11 | 1215 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) |
| 1216 | |
| 1217 | |
| 12 | 1218 def test_faking_ruby_put(self): |
| 1219 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1220 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1221 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1222 a = DoGet(_REMOTE, '/patients')[0] | |
| 1223 b = DoGet(_REMOTE, '/patients')[1] | |
| 1224 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1225 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1226 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1227 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1') | |
| 1228 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1229 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0') | |
| 1230 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1231 | |
| 1232 | |
| 1233 def test_faking_ruby_delete(self): | |
| 1234 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1235 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1236 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1237 a = DoGet(_REMOTE, '/patients')[0] | |
| 1238 b = DoGet(_REMOTE, '/patients')[1] | |
| 1239 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' }) | |
| 1240 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1241 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' }) | |
| 1242 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1243 | |
| 1244 | |
| 1245 def test_faking_google_put(self): | |
| 1246 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1247 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1248 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1249 a = DoGet(_REMOTE, '/patients')[0] | |
| 1250 b = DoGet(_REMOTE, '/patients')[1] | |
| 1251 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1252 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1253 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1254 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1') | |
| 1255 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1256 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0') | |
| 1257 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a)) | |
| 1258 | |
| 1259 | |
| 1260 def test_faking_google_delete(self): | |
| 1261 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1262 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 1263 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 1264 a = DoGet(_REMOTE, '/patients')[0] | |
| 1265 b = DoGet(_REMOTE, '/patients')[1] | |
| 1266 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1267 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1268 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' }) | |
| 1269 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 1270 | |
| 1271 | |
| 1272 def test_lua(self): | |
| 1273 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)')) | |
| 1274 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive')) | |
| 1275 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld')) | |
| 1276 | |
| 1277 | |
| 1278 def test_metadata(self): | |
| 1279 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 1280 p = DoGet(_REMOTE, '/patients')[0] | |
| 1281 i = DoGet(_REMOTE, '/instances')[0] | |
|
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1282 series = DoGet(_REMOTE, '/series')[0] |
| 12 | 1283 |
| 1284 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) | |
|
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1285 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1286 self.assertEqual(2, len(m)) |
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1287 self.assertTrue('MainDicomTagsSignature' in m) |
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1288 else: |
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1289 self.assertEqual(1, len(m)) |
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1290 self.assertTrue('LastUpdate' in m) |
| 12 | 1291 |
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1292 # The lines below failed on Orthanc <= 1.8.2 |
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1293 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/studies/%s/metadata' % p)) |
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1294 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/series/%s/metadata' % p)) |
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1295 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata' % p)) |
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1296 |
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1297 m = DoGet(_REMOTE, '/studies/%s/metadata' % DoGet(_REMOTE, '/studies')[0]) |
|
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1298 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1299 self.assertEqual(2, len(m)) |
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1300 self.assertTrue('MainDicomTagsSignature' in m) |
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1301 else: |
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1302 self.assertEqual(1, len(m)) |
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1303 self.assertTrue('LastUpdate' in m) |
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1304 |
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1305 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
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1306 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
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1307 self.assertEqual(3, len(m)) |
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1308 self.assertTrue('MainDicomTagsSignature' in m) |
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1309 else: |
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1310 self.assertEqual(2, len(m)) |
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1311 self.assertTrue('LastUpdate' in m) |
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1312 |
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1313 # New in Orthanc 1.9.0 |
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1314 self.assertTrue('RemoteAET' in m) |
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1315 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), '') # None, received by REST API |
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1316 |
| 12 | 1317 m = DoGet(_REMOTE, '/instances/%s/metadata' % i) |
|
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1318 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1319 self.assertEqual(10, len(m)) |
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1320 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1321 self.assertEqual(9, len(m)) |
|
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1322 else: |
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1323 self.assertEqual(8, len(m)) |
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1324 |
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1325 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
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1326 self.assertTrue('MainDicomTagsSignature' in m) |
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1327 |
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1328 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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1329 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
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1330 self.assertEqual(int(DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i)), 0x0c78) |
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1331 |
| 12 | 1332 self.assertTrue('IndexInSeries' in m) |
| 1333 self.assertTrue('ReceptionDate' in m) | |
| 1334 self.assertTrue('RemoteAET' in m) | |
|
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|
1335 self.assertTrue('Origin' in m) |
|
89
74b7b9aed5f8
test TransferSyntax metadata
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diff
changeset
|
1336 self.assertTrue('TransferSyntax' in m) |
|
95
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parents:
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diff
changeset
|
1337 self.assertTrue('SopClassUid' in m) |
| 145 | 1338 self.assertTrue('RemoteIP' in m) |
| 1339 self.assertTrue('HttpUsername' in m) | |
|
63
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diff
changeset
|
1340 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1) |
|
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diff
changeset
|
1341 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi') |
|
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diff
changeset
|
1342 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API |
|
89
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diff
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|
1343 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k |
|
95
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diff
changeset
|
1344 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4') |
| 12 | 1345 |
| 1346 # Play with custom metadata | |
|
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diff
changeset
|
1347 (headers, body) = DoPutRaw(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou') |
|
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|
1348 self.assertEqual('200', headers['status']) |
|
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diff
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|
1349 self.assertEqual('', body) |
|
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|
1350 |
|
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diff
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|
1351 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
397
eb87ec525b53
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diff
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|
1352 self.assertEqual('"0-%s"' % ComputeMD5('coucou'), headers['etag']) |
|
394
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|
1353 else: |
|
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|
1354 self.assertFalse('ETag' in headers) |
|
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|
1355 self.assertFalse('etag' in headers) |
|
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|
1356 |
| 12 | 1357 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
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diff
changeset
|
1358 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
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Alain Mazy <am@osimis.io>
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diff
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|
1359 self.assertEqual(3, len(m)) |
|
33051f9ac850
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diff
changeset
|
1360 self.assertTrue('MainDicomTagsSignature' in m) |
|
33051f9ac850
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diff
changeset
|
1361 else: |
|
33051f9ac850
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diff
changeset
|
1362 self.assertEqual(2, len(m)) |
| 12 | 1363 self.assertTrue('LastUpdate' in m) |
| 1364 self.assertTrue('5555' in m) | |
| 1365 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p)) | |
|
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|
1366 |
|
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diff
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|
1367 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1368 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello', headers = { |
|
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|
1369 'If-Match' : headers['etag'] |
|
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|
1370 }) |
|
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diff
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|
1371 else: |
|
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diff
changeset
|
1372 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello') |
|
391
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diff
changeset
|
1373 |
|
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diff
changeset
|
1374 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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|
1375 self.assertEqual('200', headers['status']) |
|
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diff
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|
1376 self.assertEqual('hello', body) |
|
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|
1377 |
|
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diff
changeset
|
1378 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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diff
changeset
|
1379 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p, headers = { |
|
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diff
changeset
|
1380 'If-Match' : headers['etag'] |
|
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|
1381 }) |
|
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diff
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|
1382 else: |
|
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diff
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|
1383 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p) |
|
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|
1384 |
| 12 | 1385 m = DoGet(_REMOTE, '/patients/%s/metadata' % p) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
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diff
changeset
|
1386 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
1387 self.assertEqual(2, len(m)) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
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diff
changeset
|
1388 self.assertTrue('MainDicomTagsSignature' in m) |
|
33051f9ac850
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diff
changeset
|
1389 else: |
|
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diff
changeset
|
1390 self.assertEqual(1, len(m)) |
| 12 | 1391 self.assertTrue('LastUpdate' in m) |
| 13 | 1392 |
| 1393 | |
| 1394 def test_statistics(self): | |
| 1395 # Upload 16 instances | |
| 1396 for i in range(4): | |
| 1397 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 1398 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 1399 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 1400 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 1401 | |
| 1402 s = DoGet(_REMOTE, '/statistics') | |
| 1403 self.assertEqual(16, s['CountInstances']) | |
| 1404 self.assertEqual(2, s['CountPatients']) | |
| 1405 self.assertEqual(2, s['CountStudies']) | |
| 1406 self.assertEqual(4, s['CountSeries']) | |
| 1407 d = int(s['TotalUncompressedSize']) | |
| 1408 | |
| 1409 e = 0 | |
| 1410 for patient in DoGet(_REMOTE, '/patients'): | |
| 1411 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient) | |
| 1412 self.assertEqual(8, s['CountInstances']) | |
| 1413 self.assertEqual(1, s['CountStudies']) | |
| 1414 self.assertEqual(2, s['CountSeries']) | |
| 1415 e += int(s['UncompressedSize']) | |
| 1416 | |
| 1417 for study in DoGet(_REMOTE, '/studies'): | |
| 1418 s = DoGet(_REMOTE, '/studies/%s/statistics' % study) | |
| 1419 self.assertEqual(8, s['CountInstances']) | |
| 1420 self.assertEqual(2, s['CountSeries']) | |
| 1421 e += int(s['UncompressedSize']) | |
| 1422 | |
| 1423 for series in DoGet(_REMOTE, '/series'): | |
| 1424 s = DoGet(_REMOTE, '/series/%s/statistics' % series) | |
| 1425 self.assertEqual(4, s['CountInstances']) | |
| 1426 e += int(s['UncompressedSize']) | |
| 1427 | |
| 1428 self.assertEqual(3 * d, e) | |
| 1429 | |
| 1430 | |
| 1431 def test_custom_attachment(self): | |
|
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|
1432 u = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
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|
1433 |
| 13 | 1434 patient = DoGet(_REMOTE, '/patients')[0] |
| 1435 instance = DoGet(_REMOTE, '/instances')[0] | |
| 1436 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']) | |
| 1437 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1438 | |
| 1439 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1440 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) | |
|
380
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diff
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|
1441 |
|
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diff
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|
1442 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
1443 if IsDicomUntilPixelDataStored(_REMOTE): |
|
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|
1444 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1445 self.assertTrue('dicom-until-pixel-data' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
|
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diff
changeset
|
1446 |
|
448
63f475995400
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diff
changeset
|
1447 # New in Orthanc 1.10.0 |
|
443
97fca09bf849
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diff
changeset
|
1448 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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diff
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|
1449 self.assertEqual(2, len(a)) |
|
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diff
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|
1450 self.assertEqual(1, a['dicom']) |
|
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diff
changeset
|
1451 self.assertEqual(3, a['dicom-until-pixel-data']) |
|
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|
1452 |
|
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|
1453 else: |
|
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changeset
|
1454 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
443
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diff
changeset
|
1455 |
|
448
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Orthanc 1.9.8 is now known as Orthanc 1.10.0
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diff
changeset
|
1456 # New in Orthanc 1.10.0 |
|
443
97fca09bf849
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diff
changeset
|
1457 a = DoGet(_REMOTE, '/instances/%s/attachments?full' % instance) |
|
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|
1458 self.assertEqual(1, len(a)) |
|
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diff
changeset
|
1459 self.assertEqual(1, a['dicom']) |
|
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|
1460 else: |
|
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changeset
|
1461 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
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|
1462 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance)) |
| 13 | 1463 |
|
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diff
changeset
|
1464 # New in Orthanc 1.10.0 |
|
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diff
changeset
|
1465 self.assertRaises(Exception, lambda: DoGet( |
|
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changeset
|
1466 _REMOTE, '/instances/%s/attachments?full' % instance)) |
|
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|
1467 |
| 13 | 1468 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello')) |
| 1469 hello = 'hellohellohellohellohellohellohellohellohello' | |
| 1470 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello) | |
| 1471 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1472 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1473 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1474 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient))) | |
| 1475 | |
| 1476 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world') | |
| 1477 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1478 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1479 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1480 size + | |
| 1481 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) + | |
| 1482 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1483 | |
| 1484 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
| 1485 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient)) | |
| 1486 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient)) | |
| 1487 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient) | |
| 1488 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient) | |
|
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changeset
|
1489 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2', headers = { |
|
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changeset
|
1490 'If-Match' : '0-%s' % ComputeMD5('world'), |
|
392
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changeset
|
1491 }) |
|
393
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changeset
|
1492 |
|
394
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changeset
|
1493 (headers, body) = DoGetRaw(_REMOTE, '/patients/%s/attachments/1026/data' % patient) |
|
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changeset
|
1494 self.assertEqual('200', headers['status']) |
|
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diff
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|
1495 self.assertEqual('world2', body) |
| 13 | 1496 |
| 1497 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) | |
|
392
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|
1498 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient, headers = { |
|
397
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"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
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|
1499 'If-Match' : '0-%s' % ComputeMD5(hello), |
|
392
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|
1500 }) |
| 13 | 1501 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), |
| 1502 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1503 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), | |
| 1504 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient))) | |
| 1505 | |
| 1506 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) | |
|
394
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|
1507 |
|
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|
1508 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
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|
1509 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient, headers = { |
|
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|
1510 'If-Match' : headers['etag'] |
|
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|
1511 }) |
|
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1512 else: |
|
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diff
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|
1513 self.assertFalse('etag' in headers) |
|
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diff
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|
1514 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient) |
|
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|
1515 |
| 13 | 1516 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient))) |
| 1517 | |
| 1518 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size) | |
| 1519 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) | |
| 1520 | |
| 1521 | |
| 1522 def test_incoming_storescu(self): | |
| 1523 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 45 | 1524 subprocess.check_call([ FindExecutable('storescu'), |
|
44
ffa542cce638
Toolbox.FindExecutable()
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diff
changeset
|
1525 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
| 13 | 1526 GetDatabasePath('ColorTestImageJ.dcm') ]) |
| 1527 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 1528 | |
|
63
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test Origin metadata of instances
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diff
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|
1529 i = DoGet(_REMOTE, '/instances') |
|
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diff
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|
1530 self.assertEqual(1, len(i)) |
|
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diff
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|
1531 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0]) |
|
379
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|
1532 |
|
554
ede184638961
added test_pixel_data_vr
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diff
changeset
|
1533 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
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diff
changeset
|
1534 self.assertEqual(10, len(m)) |
|
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diff
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|
1535 elif IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
379
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|
1536 self.assertEqual(9, len(m)) |
|
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|
1537 else: |
|
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diff
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|
1538 self.assertEqual(8, len(m)) |
|
547
7de5fd295025
testing instance metadata "PixelDataVR"
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543
diff
changeset
|
1539 |
|
7de5fd295025
testing instance metadata "PixelDataVR"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1540 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
7de5fd295025
testing instance metadata "PixelDataVR"
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diff
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|
1541 self.assertTrue('MainDicomTagsSignature' in m) # New in Orthanc 1.11.0 |
|
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diff
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|
1542 |
|
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diff
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|
1543 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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diff
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|
1544 self.assertTrue('PixelDataOffset' in m) # New in Orthanc 1.9.1 |
|
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diff
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|
1545 self.assertEqual(2242, DoGet(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i[0])) |
|
7de5fd295025
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diff
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|
1546 |
|
63
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diff
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|
1547 self.assertTrue('IndexInSeries' in m) |
|
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diff
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|
1548 self.assertTrue('ReceptionDate' in m) |
|
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diff
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|
1549 self.assertTrue('RemoteAET' in m) |
|
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diff
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|
1550 self.assertTrue('Origin' in m) |
|
89
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diff
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|
1551 self.assertTrue('TransferSyntax' in m) |
|
95
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diff
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|
1552 self.assertTrue('SopClassUid' in m) |
| 145 | 1553 self.assertTrue('RemoteIP' in m) |
| 1554 self.assertTrue('CalledAET' in m) | |
|
63
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diff
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|
1555 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1) |
|
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diff
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|
1556 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol') |
|
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diff
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|
1557 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU') |
|
89
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|
1558 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1') |
|
95
a807a4699eb4
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diff
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|
1559 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7') |
|
63
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diff
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|
1560 |
|
369
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test "RemoteAET" metadata at series level
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diff
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|
1561 series = DoGet(_REMOTE, '/series')[0] |
|
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diff
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|
1562 m = DoGet(_REMOTE, '/series/%s/metadata' % series) |
|
451
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diff
changeset
|
1563 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
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diff
changeset
|
1564 self.assertEqual(3, len(m)) |
|
33051f9ac850
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diff
changeset
|
1565 self.assertTrue('MainDicomTagsSignature' in m) |
|
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diff
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|
1566 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
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diff
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|
1567 self.assertEqual(2, len(m)) |
|
369
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|
1568 self.assertTrue('LastUpdate' in m) |
|
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diff
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|
1569 self.assertTrue('RemoteAET' in m) |
|
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diff
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|
1570 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/RemoteAET' % series), 'STORESCU') |
|
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diff
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|
1571 self.assertEqual(DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % series), |
|
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|
1572 DoGet(_REMOTE, '/instances/%s/metadata/ReceptionDate' % i[0])) |
|
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|
1573 |
| 13 | 1574 |
| 1575 def test_incoming_findscu(self): | |
| 1576 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
| 1577 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') | |
| 1578 | |
| 1579 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ]) | |
| 1580 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1581 self.assertEqual(2, len(patientNames)) | |
| 1582 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1583 self.assertTrue('Anonymized' in patientNames) | |
| 1584 | |
| 668 | 1585 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010=*' ]) |
| 1586 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) | |
| 1587 self.assertEqual(2, len(patientNames)) | |
| 1588 self.assertTrue('Test Patient BG ' in patientNames) | |
| 1589 self.assertTrue('Anonymized' in patientNames) | |
| 1590 | |
| 13 | 1591 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ]) |
| 1592 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) | |
| 1593 self.assertEqual(2, len(series)) | |
| 1594 self.assertTrue('20070208' in series) | |
| 1595 self.assertTrue('19980312' in series) | |
| 1596 | |
|
335
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diff
changeset
|
1597 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'Modality=MR\\XA' ]) |
|
56
1059b8de42de
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diff
changeset
|
1598 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i) |
|
1059b8de42de
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diff
changeset
|
1599 self.assertEqual(1, len(series)) |
|
1059b8de42de
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diff
changeset
|
1600 self.assertTrue('19980312' in series) |
|
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diff
changeset
|
1601 |
| 13 | 1602 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ]) |
| 1603 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1604 self.assertEqual(1, len(series)) | |
| 1605 | |
| 1606 # Test the "CaseSentitivePN" flag (false by default) | |
| 1607 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ]) | |
| 1608 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i) | |
| 1609 self.assertEqual(1, len(series)) | |
|
66
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diff
changeset
|
1610 |
| 70 | 1611 # Test range search (buggy if Orthanc <= 0.9.6) |
| 1612 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ]) | |
| 1613 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1614 self.assertEqual(2, len(studies)) | |
| 1615 self.assertTrue('20070208' in studies) | |
| 1616 self.assertTrue('19980312' in studies) | |
| 1617 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ]) | |
| 1618 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1619 self.assertEqual(1, len(studies)) | |
| 1620 self.assertTrue('19980312' in studies) | |
| 1621 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ]) | |
| 1622 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i) | |
| 1623 self.assertEqual(1, len(studies)) | |
| 1624 self.assertTrue('19980312' in studies) | |
|
326
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|
1625 |
|
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Test "Retrieve AE Title" is returned by C-FIND SCP
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|
1626 # Test that "Retrieve AE Title (0008,0054)" is present, which |
|
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|
1627 # was *not* the case in Orthanc <= 1.7.2 |
|
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changeset
|
1628 i = CallFindScu([ '-k', '0008,0052=INSTANCE' ]) |
|
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changeset
|
1629 instances = re.findall('\(0008,0054\).*?\[\s*(.*?)\s*\]', i) |
|
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|
1630 self.assertEqual(2, len(instances)) |
|
05f48c19c60d
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changeset
|
1631 self.assertEqual('ORTHANC', instances[0].strip()) |
|
05f48c19c60d
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changeset
|
1632 self.assertEqual('ORTHANC', instances[1].strip()) |
| 13 | 1633 |
| 1634 | |
|
191
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diff
changeset
|
1635 def test_incoming_findscu_2(self): |
|
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|
1636 # This test fails if "LookupMode_DatabaseOnly" is used |
|
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|
1637 # (sequences are not available in this mode, and only main |
|
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|
1638 # DICOM tags are returned) |
|
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|
1639 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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changeset
|
1640 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
1641 |
|
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|
1642 # Test returning sequence values (only since Orthanc 0.9.5) |
|
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|
1643 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag |
|
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changeset
|
1644 sequences = re.findall('\(0008,2112\)', i) |
|
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1645 self.assertEqual(1, len(sequences)) |
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1646 |
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1647 # Test returning a non-main DICOM tag, |
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1648 # "SecondaryCaptureDeviceID" (0018,1010), whose value is |
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1649 # "MEDPC" in "ColorTestImageJ.dcm" |
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1650 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ]) |
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1651 tags = re.findall('\(0018,1010\).*MEDPC', i) |
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1652 self.assertEqual(1, len(tags)) |
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1653 |
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1654 |
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1655 def test_incoming_findscu_3(self): |
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1656 # This test fails if "LookupMode_DatabaseOnly" or |
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1657 # "LookupMode_DiskOnAnswer" is used, as |
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1658 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM |
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1659 # tag, as thus a constraint cannot be applied to it |
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1660 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
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1661 |
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1662 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ]) |
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1663 sequences = re.findall('\(0018,1010\)', i) |
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1664 self.assertEqual(1, len(sequences)) |
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1665 |
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1666 |
| 13 | 1667 def test_incoming_movescu(self): |
| 1668 UploadInstance(_REMOTE, 'Multiframe.dcm') | |
|
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1669 |
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1670 # No matching patient, so no job is created |
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1671 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1672 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ]) |
| 13 | 1673 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
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1674 |
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1675 # 1 Matching patient, track the job |
| 138 | 1676 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 1677 '--patient', | |
| 1678 '-k', '0008,0052=PATIENT', | |
| 1679 '-k', 'PatientID=12345678' | |
| 1680 ]))) | |
| 13 | 1681 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
| 1682 | |
| 1683 | |
| 1684 def test_findscu(self): | |
| 1685 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 1686 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 1687 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] | |
| 1688 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1689 | |
| 1690 # Test the "find-patient" level | |
| 1691 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1692 self.assertEqual(1, len(p)) | |
| 1693 self.assertEqual('ozp00SjY2xG', p[0]['PatientID']) | |
| 1694 | |
| 1695 # Test wildcards constraints. The "LO" value representation | |
| 1696 # for PatientID is always case-sensitive, but the "PN" for | |
| 1697 # PatientName might depend on the implementation: | |
| 1698 # "GenerateConfigurationForTests.py" will force it to be case | |
| 1699 # insensitive (which was the default until Orthanc 0.8.6). | |
| 1700 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' }) | |
| 1701 self.assertEqual(1, len(p)) | |
| 1702 | |
| 1703 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' }) | |
| 1704 self.assertEqual(1, len(p)) | |
| 1705 | |
| 1706 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' }) | |
| 1707 self.assertEqual(1, len(p)) | |
| 1708 | |
| 1709 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' }) | |
| 1710 self.assertEqual(1, len(p)) | |
| 1711 | |
| 1712 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' }) | |
| 1713 self.assertEqual(0, len(p)) | |
| 1714 | |
| 1715 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' }) | |
| 1716 self.assertEqual(0, len(p)) | |
| 1717 | |
| 1718 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' }) | |
| 1719 self.assertEqual(0, len(p)) | |
| 1720 | |
| 1721 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain') | |
| 1722 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain') | |
| 1723 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }) | |
| 1724 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { }))) | |
| 1725 | |
| 1726 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' }) | |
| 1727 self.assertEqual(2, len(p)) | |
| 1728 | |
| 1729 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm" | |
| 1730 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' }) | |
| 1731 self.assertEqual(1, len(s)) | |
| 1732 self.assertEqual('20070208', s[0]['StudyDate']) | |
| 1733 | |
| 1734 # Test range searches | |
| 1735 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1736 'StudyDate' : '-20070101' }) | |
| 1737 self.assertEqual(0, len(t)) | |
| 1738 | |
| 1739 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1740 'StudyDate' : '20090101-' }) | |
| 1741 self.assertEqual(0, len(t)) | |
| 1742 | |
| 1743 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1744 'StudyDate' : '20070101-' }) | |
| 1745 self.assertEqual(1, len(t)) | |
| 1746 | |
| 1747 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1748 'StudyDate' : '-20090101' }) | |
| 1749 self.assertEqual(1, len(t)) | |
| 1750 | |
| 1751 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1752 'StudyDate' : '20070207-20070207' }) | |
| 1753 self.assertEqual(0, len(t)) | |
| 1754 | |
| 1755 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1756 'StudyDate' : '20070208-20070208' }) | |
| 1757 self.assertEqual(1, len(t)) | |
| 1758 | |
| 1759 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ', | |
| 1760 'StudyDate' : '20070209-20070209' }) | |
| 1761 self.assertEqual(0, len(t)) | |
| 1762 | |
| 1763 # Test the ModalitiesInStudy tag | |
| 1764 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1765 'PatientID' : 'B9uTHKOZ', | |
| 1766 'ModalitiesInStudy' : 'US' }) | |
| 1767 self.assertEqual(0, len(t)) | |
| 1768 | |
| 1769 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1770 'PatientID' : 'B9uTHKOZ', | |
| 1771 'ModalitiesInStudy' : 'CT' }) | |
| 1772 self.assertEqual(1, len(t)) | |
| 1773 | |
| 1774 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { | |
| 1775 'PatientID' : 'B9uTHKOZ', | |
| 1776 'ModalitiesInStudy' : 'US\\CT' }) | |
| 1777 self.assertEqual(1, len(t)) | |
| 1778 | |
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1779 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { |
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1780 'PatientID' : 'B9uTHKOZ', |
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1781 'ModalitiesInStudy' : '' }) |
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1782 self.assertEqual(1, len(t)) |
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1783 |
| 13 | 1784 # Test the "find-series" level |
| 1785 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1786 'PatientID' : 'B9uTHKOZ', | |
| 1787 'StudyInstanceUID' : s[0]['StudyInstanceUID'] }) | |
| 1788 self.assertEqual(1, len(t)) | |
| 1789 | |
| 1790 # Test "\" separator | |
| 1791 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1792 'PatientID' : 'B9uTHKOZ', | |
| 1793 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1794 'Modality' : 'MR\\CT\\US' }) | |
| 1795 self.assertEqual(1, len(t)) | |
| 1796 | |
| 1797 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', { | |
| 1798 'PatientID' : 'B9uTHKOZ', | |
| 1799 'StudyInstanceUID' : s[0]['StudyInstanceUID'], | |
| 1800 'Modality' : 'MR\\US' }) | |
| 1801 self.assertEqual(0, len(t)) | |
| 1802 | |
| 1803 | |
| 1804 def test_update_modalities(self): | |
| 1805 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
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1806 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/modalities/toto')) |
| 13 | 1807 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ]) |
| 116 | 1808 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer |
| 1809 DoDelete(_REMOTE, '/modalities/tata') | |
| 124 | 1810 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ]) |
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1811 DoDelete(_REMOTE, '/modalities/tata') |
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1812 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ]) |
| 128 | 1813 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand') |
|
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1814 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET']) |
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1815 self.assertEqual('localhost', modalitiesReadback['tata']['Host']) |
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1816 self.assertEqual(2000, modalitiesReadback['tata']['Port']) |
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1817 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer']) |
| 116 | 1818 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ])) |
| 13 | 1819 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto')) |
| 1820 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata')) | |
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1821 |
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1822 # New in Orthanc 1.8.1 |
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1823 self.assertTrue('configuration' in DoGet(_REMOTE, '/modalities/tata')) |
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1824 self.assertEqual(modalitiesReadback['tata'], DoGet(_REMOTE, '/modalities/tata/configuration')) |
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1825 |
| 13 | 1826 DoDelete(_REMOTE, '/modalities/toto') |
| 1827 DoDelete(_REMOTE, '/modalities/tata') | |
| 1828 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto')) | |
| 1829 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata')) | |
| 1830 | |
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1831 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
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1832 self.assertEqual(DoGet(_REMOTE, '/modalities?expand'), DoGet(_REMOTE, '/modalities?expand=true')) |
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1833 self.assertEqual(DoGet(_REMOTE, '/modalities'), DoGet(_REMOTE, '/modalities?expand=false')) |
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1834 |
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1835 |
| 13 | 1836 |
| 1837 def test_update_peers(self): | |
| 1838 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v | |
| 1839 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
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1840 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/peers/toto')) |
| 13 | 1841 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ]) |
| 214 | 1842 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/', |
| 1843 'Username': 'user', | |
| 1844 'Password' : 'pass', | |
| 1845 'RemoteSelf' : 'self' }) | |
| 128 | 1846 self.assertTrue('tata' in DoGet(_REMOTE, '/peers')) |
| 1847 peersReadback = DoGet(_REMOTE, '/peers?expand') | |
| 1848 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url']) | |
| 1849 self.assertEqual('user', peersReadback['tata']['Username']) | |
| 214 | 1850 |
| 1851 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4): | |
| 1852 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included | |
| 1853 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included | |
| 1854 self.assertEqual('self', peersReadback['tata']['RemoteSelf']) | |
| 1855 else: | |
| 1856 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1857 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1858 self.assertFalse('RemoteSelf' in peersReadback['tata']) | |
| 1859 | |
| 128 | 1860 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included |
| 1861 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included | |
| 1862 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included | |
| 214 | 1863 |
| 13 | 1864 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ])) |
| 1865 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ])) | |
| 1866 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto')) | |
| 1867 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata')) | |
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1868 |
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1869 # New in Orthanc 1.8.1 |
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1870 self.assertTrue('configuration' in DoGet(_REMOTE, '/peers/tata')) |
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1871 self.assertEqual(peersReadback['tata'], DoGet(_REMOTE, '/peers/tata/configuration')) |
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1872 |
| 13 | 1873 DoDelete(_REMOTE, '/peers/toto') |
| 1874 DoDelete(_REMOTE, '/peers/tata') | |
| 1875 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto')) | |
| 1876 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata')) | |
| 1877 | |
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1878 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
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1879 self.assertEqual(DoGet(_REMOTE, '/peers?expand'), DoGet(_REMOTE, '/peers?expand=true')) |
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1880 self.assertEqual(DoGet(_REMOTE, '/peers'), DoGet(_REMOTE, '/peers?expand=false')) |
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1881 |
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1882 |
| 13 | 1883 |
| 1884 def test_mesterhazy_modification(self): | |
| 1885 # When I modify a series ( eg. curl | |
| 1886 # http://localhost:8042/series/uidhere/modify -X POST -d | |
| 1887 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified | |
| 1888 # series is added to a new Study, instead of the existing | |
| 1889 # Study. Fixed in Orthanc 0.7.5 | |
| 1890 | |
| 1891 u = UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 1892 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 1893 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 1894 | |
| 1895 modified = DoPost(_REMOTE, '/series/%s/modify' % series, | |
| 1896 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }})) | |
| 1897 | |
| 1898 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy']) | |
| 1899 | |
| 1900 | |
| 1901 def test_create(self): | |
| 685 | 1902 payload = { |
| 1903 'PatientName' : 'Jodogne', | |
| 1904 'Modality' : 'CT', | |
| 1905 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', | |
| 1906 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA | |
| 1907 } | |
| 1908 | |
| 1909 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): | |
| 687 | 1910 payload['TimeRange'] = '3.12\\4.12' # https://discourse.orthanc-server.org/t/multiplicity-on-dicom-tags/5144 |
| 685 | 1911 |
| 13 | 1912 i = DoPost(_REMOTE, '/tools/create-dicom', |
| 685 | 1913 json.dumps(payload)) |
| 13 | 1914 |
| 1915 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 1916 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) | |
| 682 | 1917 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i['ID']) |
| 686 | 1918 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): |
| 1919 self.assertIn("3.12", tags["TimeRange"]) | |
| 1920 self.assertIn("4.12", tags["TimeRange"]) | |
| 1921 self.assertIn("\\", tags["TimeRange"]) | |
| 681 | 1922 |
| 1923 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) | |
| 1924 self.assertEqual((5, 5), png.size) | |
| 1925 | |
| 1926 j = DoGet(_REMOTE, i['Path']) | |
| 1927 self.assertEqual('Instance', j['Type']) | |
| 1928 self.assertEqual(j['ID'], i['ID']) | |
| 1929 | |
| 13 | 1930 |
| 1931 def test_pilates(self): | |
| 1932 # "SCU failed error when accessing orthanc with osirix" by | |
| 1933 # Pilates Agentur (Mar 10, 2014 at 9:33 PM) | |
| 1934 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID'] | |
| 1935 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) | |
| 1936 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 1937 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) | |
| 1938 | |
| 1939 | |
| 1940 def test_shared_tags(self): | |
| 1941 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1942 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID'] | |
| 1943 p = DoGet(_REMOTE, '/patients')[0] | |
| 1944 | |
| 1945 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1946 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
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1947 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)) |
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1948 |
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1949 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value']) |
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1950 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName']) |
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1951 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010']) |
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1952 |
| 13 | 1953 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) |
| 1954 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1955 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1956 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1957 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p)) | |
| 1958 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)) | |
| 1959 | |
| 1960 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a)) | |
| 1961 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)) | |
| 1962 | |
| 1963 | |
| 1964 def test_modules(self): | |
| 1965 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1966 p = DoGet(_REMOTE, '/patients')[0] | |
| 1967 s = DoGet(_REMOTE, '/studies')[0] | |
| 1968 t = DoGet(_REMOTE, '/series')[0] | |
| 1969 | |
| 1970 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p)) | |
| 1971 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p)) | |
| 1972 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p)) | |
| 1973 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p)) | |
| 1974 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s)) | |
| 1975 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s)) | |
| 1976 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p)) | |
| 1977 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p)) | |
| 1978 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a)) | |
| 1979 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a)) | |
| 1980 | |
| 1981 | |
| 1982 def test_auto_directory(self): | |
| 1983 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 1984 self.assertTrue('now' in DoGet(_REMOTE, '/tools')) | |
| 1985 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools')) | |
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1986 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools')) |
| 13 | 1987 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000) |
| 1988 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 1989 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1990 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1991 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1992 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1993 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1994 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1995 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest')) | |
| 1996 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer')) | |
| 1997 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) | |
| 79 | 1998 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a)) |
| 13 | 1999 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope')) |
| 28 | 2000 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope')) |
| 2001 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html')) | |
| 2002 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status) | |
| 2003 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status) | |
| 13 | 2004 |
| 2005 | |
| 2006 def test_echo(self): | |
| 2007 DoPost(_REMOTE, '/modalities/orthanctest/echo') | |
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2008 DoPost(_REMOTE, '/modalities/orthanctest/echo', '{}') |
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2009 |
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2010 # The following was not working in Orthanc 1.7.0 -> 1.8.1 |
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2011 DoPost(_REMOTE, '/modalities/orthanctest/echo', '') |
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2012 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/nope/echo')) |
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2013 |
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2014 # New in Orthanc 1.8.1 |
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2015 DoPost(_REMOTE, '/tools/dicom-echo', [ |
| 355 | 2016 _REMOTE['DicomAet'], _REMOTE['Server'], _REMOTE['DicomPort'] ]) |
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2017 DoPost(_REMOTE, '/tools/dicom-echo', DoGet(_REMOTE, '/modalities/orthanctest/configuration')) |
| 13 | 2018 |
| 353 | 2019 # Use the 'CheckFind' new option in Orthanc 1.8.1 |
| 2020 DoPost(_REMOTE, '/modalities/self/echo', { 'CheckFind' : True }) | |
| 2021 DoPost(_REMOTE, '/tools/dicom-echo', { | |
| 2022 'AET' : _REMOTE['DicomAet'], | |
| 2023 'Host' : _REMOTE['Server'], | |
| 2024 'Port' : _REMOTE['DicomPort'], | |
| 2025 'CheckFind' : True | |
| 2026 }) | |
| 2027 | |
| 13 | 2028 |
| 2029 def test_xml(self): | |
| 2030 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' }) | |
| 2031 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' })) | |
| 2032 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item') | |
| 2033 self.assertEqual(len(items), len(json)) | |
| 2034 | |
| 2035 self.assertTrue('dicom-conformance' in json) | |
| 2036 | |
| 2037 ok = False | |
| 2038 for i in items: | |
| 2039 if i.childNodes[0].data == 'dicom-conformance': | |
| 2040 ok = True | |
| 2041 self.assertTrue(ok) | |
| 2042 | |
| 2043 | |
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2044 def test_googlecode_issue_16(self): |
| 13 | 2045 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID'] |
| 2046 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer'] | |
| 2047 self.assertEqual('0018,1063', t) | |
| 2048 | |
| 2049 | |
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2050 def test_googlecode_issue_22(self): |
| 13 | 2051 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] |
| 2052 a = [ | |
| 2053 "f804691f62197040438f4627c6b994f1", # Frame 0 | |
| 2054 "c69eee9a51eea3e8611e82e578897254", | |
| 2055 "315666be83e2d0111c77bc0996d84901", | |
| 2056 "3e27aa959d911172c48a1436443c72b1", | |
| 2057 "958642c9e7e9d232d3869faff546058c", | |
| 2058 "5e7ea8e3e4230cae707d143481355c59", | |
| 2059 "eda37f83558d858a596175aed8b2ad47", | |
| 2060 "486713bd2895c4ecbe0e97715ac7f80a", | |
| 2061 "091ef729eb169e67da8a0faa9631f9a8", | |
| 2062 "5aa2b8c7ffe0a483efaa8e12417686ca", | |
| 2063 "e2f39e85896fe58876654b94cd0b5013", | |
| 2064 "6fd2129e4950abbe1be053bc814d5da8", | |
| 2065 "c3331a8ba7a757f3d423735ab7fa81f9", | |
| 2066 "746f808582156734dd6b6fdfd3a0b72c", | |
| 2067 "8075ea2b227a70c60ea6b7b75a6bb190", | |
| 2068 "806b8b3e300c615099c11a5ec23465aa", | |
| 2069 "7c836aa298ba6eef96434579af631a11", | |
| 2070 "a0357dc9f4f72d73a885c33d7c287446", | |
| 2071 "f25ba3be1cc7d7fad95706adc199ea7d", | |
| 2072 "8b114c526b8cbed6cad8a3248b7b480c", | |
| 2073 "44e6670f127e612a2b4aa60a0d207698", | |
| 2074 "b8945f90fe02facf2ace24ca1ecbe0a5", | |
| 2075 "95c796c2fa8f59018b15cf2987b1f79b", | |
| 2076 "ce0a51ab30224205b44920221dc27351", # Frame 23 | |
| 2077 ] | |
| 2078 | |
| 2079 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 2080 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s)) | |
| 2081 | |
| 2082 for i in range(len(a)): | |
| 2083 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i)))) | |
| 2084 | |
| 2085 | |
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2086 def test_googlecode_issue_19(self): |
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2087 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc |
| 13 | 2088 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm |
| 2089 | |
| 2090 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID'] | |
| 304 | 2091 if not HasGdcmPlugin(_REMOTE): |
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2092 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview')) |
| 13 | 2093 |
| 2094 | |
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2095 def test_googlecode_issue_37(self): |
| 13 | 2096 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1 |
| 2097 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] | |
| 2098 | |
| 2099 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2100 'CaseSensitive' : True, | |
| 2101 'Query' : { 'StationName' : 'SMR4-MP3' }}) | |
| 2102 self.assertEqual(1, len(a)) | |
| 14 | 2103 |
| 2104 | |
| 2105 def test_rest_find(self): | |
| 548 | 2106 # Upload 12 instances |
| 2107 for i in range(3): | |
| 14 | 2108 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
| 2109 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2110 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2111 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2112 | |
| 548 | 2113 |
| 2114 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2115 'CaseSensitive' : True, | |
| 2116 'Query' : { | |
| 2117 'PatientName' : '*NE*', | |
| 2118 'StudyDate': '20080819' | |
| 2119 }}) | |
| 2120 self.assertEqual(1, len(a)) | |
| 2121 | |
| 2122 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2123 'CaseSensitive' : True, | |
| 2124 'Query' : { | |
| 2125 'PatientName' : '*NE*', | |
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2126 'PatientBirthDate': '20080101-20081231', |
| 548 | 2127 'PatientSex': '0000' |
| 2128 }}) | |
| 2129 self.assertEqual(1, len(a)) | |
| 2130 | |
| 2131 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2132 'CaseSensitive' : True, | |
| 2133 'Query' : { | |
| 2134 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' | |
| 2135 }}) | |
| 2136 self.assertEqual(2, len(a)) | |
| 2137 | |
| 2138 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 2139 'CaseSensitive' : True, | |
| 2140 'Query' : { | |
| 2141 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881', | |
| 2142 'SeriesInstanceUID': '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' | |
| 2143 }}) | |
| 2144 self.assertEqual(3, len(a)) | |
| 2145 | |
| 2146 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2147 'CaseSensitive' : True, | |
| 2148 'Query' : { | |
| 2149 'StudyDate' : '20080818-20080820', | |
| 2150 'Modality': 'MR' | |
| 2151 }}) | |
| 2152 self.assertEqual(2, len(a)) | |
| 2153 | |
| 2154 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2155 'CaseSensitive' : True, | |
| 2156 'Query' : { | |
| 2157 'StudyDate' : '20080818-', | |
| 2158 'ModalitiesInStudy': 'MR' | |
| 2159 }}) | |
| 2160 self.assertEqual(1, len(a)) | |
| 2161 | |
| 2162 | |
| 14 | 2163 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
| 2164 'CaseSensitive' : False, | |
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2165 'Query' : { 'PatientName' : 'BRAINIX' }}) |
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2166 self.assertEqual(1, len(a)) |
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2168 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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2169 'CaseSensitive' : False, |
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2170 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }}) |
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2171 self.assertEqual(2, len(a)) |
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2172 |
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2173 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
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2174 'CaseSensitive' : False, |
| 14 | 2175 'Query' : { 'PatientName' : '*n*' }}) |
| 2176 self.assertEqual(2, len(a)) | |
| 2177 | |
| 2178 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 2179 'CaseSensitive' : True, | |
| 2180 'Query' : { 'PatientName' : '*n*' }}) | |
| 2181 self.assertEqual(0, len(a)) | |
| 2182 | |
| 2183 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, | |
| 2184 'Level' : 'Patient', | |
| 2185 'CaseSensitive' : False, | |
| 2186 'Query' : { 'PatientName' : '*ne*' }}) | |
| 2187 self.assertEqual(1, len(a)) | |
| 2188 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate']) | |
| 2189 | |
| 2190 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 2191 'CaseSensitive' : True, | |
| 2192 'Query' : { 'PatientName' : '*ne*' }}) | |
| 2193 self.assertEqual(0, len(a)) | |
| 2194 | |
| 2195 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 2196 'CaseSensitive' : True, | |
| 2197 'Query' : { 'PatientName' : '*NE*' }}) | |
| 2198 self.assertEqual(1, len(a)) | |
| 2199 | |
| 2200 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 2201 'CaseSensitive' : True, | |
| 2202 'Query' : { 'PatientName' : '*NE*' }}) | |
| 2203 self.assertEqual(2, len(a)) | |
| 2204 | |
| 2205 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 2206 'CaseSensitive' : True, | |
| 2207 'Query' : { 'PatientName' : '*NE*' }}) | |
| 548 | 2208 self.assertEqual(6, len(a)) |
| 14 | 2209 |
| 2210 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }}) | |
| 2211 self.assertEqual(2, len(a)) | |
| 2212 | |
| 2213 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }}) | |
| 2214 self.assertEqual(2, len(a)) | |
| 2215 | |
| 2216 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }}) | |
| 2217 self.assertEqual(4, len(a)) | |
| 2218 | |
| 2219 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }}) | |
| 548 | 2220 self.assertEqual(12, len(a)) |
| 14 | 2221 |
|
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2222 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2223 'Expand' : True, |
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2224 'Query' : { 'StudyDate' : '20061201-20061201' }}) |
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2225 self.assertEqual(1, len(a)) |
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2226 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2227 |
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2228 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2229 'Expand' : True, |
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2230 'Query' : { 'StudyDate' : '20061201-20091201' }}) |
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2231 self.assertEqual(2, len(a)) |
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2232 for i in range(2): |
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2233 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2234 |
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2235 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2236 'Query' : { 'StudyDate' : '20061202-20061202' }}) |
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2237 self.assertEqual(0, len(a)) |
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2238 |
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2239 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2240 'Expand' : True, |
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2241 'Query' : { 'StudyDate' : '-20061201' }}) |
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2242 self.assertEqual(1, len(a)) |
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2243 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName']) |
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2244 |
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2245 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2246 'Expand' : True, |
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2247 'Query' : { 'StudyDate' : '-20051201' }}) |
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2248 self.assertEqual(0, len(a)) |
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2249 |
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2250 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2251 'Expand' : True, |
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2252 'Query' : { 'StudyDate' : '20061201-' }}) |
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2253 self.assertEqual(2, len(a)) |
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2254 for i in range(2): |
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2255 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE']) |
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2256 |
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2257 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2258 'Expand' : True, |
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2259 'Query' : { 'StudyDate' : '20061202-' }}) |
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2260 self.assertEqual(1, len(a)) |
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2261 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2262 |
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2263 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2264 'Expand' : True, |
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2265 'Query' : { 'StudyDate' : '20080819-' }}) |
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2266 self.assertEqual(1, len(a)) |
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2267 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) |
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2268 |
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2269 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
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2270 'Expand' : True, |
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2271 'Query' : { 'StudyDate' : '20080820-' }}) |
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2272 self.assertEqual(0, len(a)) |
|
666
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2273 |
|
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2274 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
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2275 'Expand' : True, |
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2276 'Query' : { 'PatientPosition' : 'HFS' }}) |
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2277 self.assertEqual(2, len(a)) |
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2278 |
|
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2279 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
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2280 'Expand' : False, |
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2281 'Query' : { 'PatientPosition' : 'HFS' }}) |
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2282 self.assertEqual(2, len(a)) |
|
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2283 |
| 14 | 2284 |
| 2285 def test_rest_query_retrieve(self): | |
| 2286 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2287 | |
| 2288 # Upload 8 instances | |
| 2289 for i in range(2): | |
| 2290 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 2291 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) | |
| 2292 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) | |
| 2293 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) | |
| 2294 | |
| 2295 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 2296 for p in DoGet(_REMOTE, '/patients'): | |
| 2297 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 2298 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 2299 | |
| 2300 for q in DoGet(_REMOTE, '/queries'): | |
| 2301 DoDelete(_REMOTE, '/queries/%s' % q) | |
| 2302 | |
| 2303 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 2304 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) | |
|
509
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2305 |
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2306 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # TODO: check why this works with 0.8.6 and not with more recent versions |
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2307 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series', |
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2308 'Query' : { |
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2309 'PatientName' : '*NE*', |
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|
2310 'StudyDate' : '*', |
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|
2311 }})['ID'] |
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2312 self.assertEqual(1, len(DoGet(_REMOTE, '/queries'))) |
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2313 |
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|
2314 b = DoGet(_REMOTE, '/queries/%s' % a) |
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2315 self.assertTrue('answers' in b) |
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2316 self.assertTrue('level' in b) |
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2317 self.assertTrue('modality' in b) |
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2318 self.assertTrue('query' in b) |
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2319 self.assertTrue('retrieve' in b) |
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2320 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a)) |
|
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|
2321 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a)) |
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|
2322 |
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2323 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a) |
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2324 self.assertEqual(2, len(q)) |
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2325 self.assertTrue('PatientName' in q) |
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2326 self.assertTrue('StudyDate' in q) |
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2327 self.assertEqual('*NE*', q['PatientName']) |
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2328 self.assertEqual('*', q['StudyDate']) |
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2329 |
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2330 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
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2331 |
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2332 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a) |
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2333 self.assertTrue('content' in s) |
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2334 self.assertTrue('retrieve' in s) |
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2335 |
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2336 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) |
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2337 self.assertEqual('887', s['PatientID']) |
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2338 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID']) |
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2339 |
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2340 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
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2341 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC') |
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2342 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2343 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2344 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
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2345 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
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2346 |
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2347 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type) |
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2348 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
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2349 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
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2350 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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2351 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
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2352 |
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2353 # New in Orthanc 1.4.3 |
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2354 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
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2355 self.assertEqual(2, len(s)) |
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2356 for i in range(2): |
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2357 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel']) |
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2358 self.assertEqual('887', s[i]['PatientID']) |
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2359 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID']) |
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2360 |
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2361 DoDelete(_REMOTE, '/queries/%s' % a) |
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2362 self.assertEqual(0, len(DoGet(_REMOTE, '/queries'))) |
| 14 | 2363 |
| 2364 | |
| 2365 def test_parent(self): | |
| 2366 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2367 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2' | |
| 2368 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' | |
| 2369 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 2370 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d' | |
|
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2371 self.assertEqual(instance, u) |
| 14 | 2372 |
| 2373 a = DoGet(_REMOTE, '/studies/%s/patient' % study) | |
| 2374 self.assertEqual('Patient', a['Type']) | |
| 2375 self.assertEqual(patient, a['ID']) | |
| 2376 | |
| 2377 a = DoGet(_REMOTE, '/series/%s/patient' % series) | |
| 2378 self.assertEqual('Patient', a['Type']) | |
| 2379 self.assertEqual(patient, a['ID']) | |
| 2380 | |
| 2381 a = DoGet(_REMOTE, '/series/%s/study' % series) | |
| 2382 self.assertEqual('Study', a['Type']) | |
| 2383 self.assertEqual(study, a['ID']) | |
| 2384 | |
| 2385 a = DoGet(_REMOTE, '/instances/%s/patient' % instance) | |
| 2386 self.assertEqual('Patient', a['Type']) | |
| 2387 self.assertEqual(patient, a['ID']) | |
| 2388 | |
| 2389 a = DoGet(_REMOTE, '/instances/%s/study' % instance) | |
| 2390 self.assertEqual('Study', a['Type']) | |
| 2391 self.assertEqual(study, a['ID']) | |
| 2392 | |
| 2393 a = DoGet(_REMOTE, '/instances/%s/series' % instance) | |
| 2394 self.assertEqual('Series', a['Type']) | |
| 2395 self.assertEqual(series, a['ID']) | |
| 2396 | |
| 2397 | |
| 2398 def test_shanon(self): | |
| 2399 def Anonymize(instance, replacements = {}): | |
| 119 | 2400 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { |
| 2401 'Replace' : replacements, | |
| 2402 'Force' : True, | |
| 2403 }, 'application/json') | |
| 14 | 2404 |
| 2405 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2406 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2407 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2408 | |
| 2409 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2410 ids = [ 'ozp00SjY2xG', | |
| 2411 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2412 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2413 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2414 | |
| 2415 a = ExtractDicomTags(Anonymize(u), tags) | |
| 2416 for i in range(4): | |
| 2417 self.assertNotEqual(ids[i], a[i]) | |
| 2418 self.assertTrue(a[4].startswith('Orthanc')) | |
| 2419 | |
| 2420 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags) | |
| 2421 for i in range(4): | |
| 2422 self.assertNotEqual(ids[i], a[i]) | |
| 2423 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2424 | |
| 2425 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2426 self.assertEqual('instance', a[3]) | |
| 2427 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2428 | |
| 2429 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2430 self.assertEqual('series', a[2]) | |
| 2431 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2432 | |
| 2433 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2434 self.assertEqual('study', a[1]) | |
| 2435 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2436 | |
| 2437 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags) | |
| 2438 self.assertEqual('patient', a[0]) | |
| 2439 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2440 | |
| 2441 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient', | |
| 2442 'StudyInstanceUID' : 'study', | |
| 2443 'SeriesInstanceUID' : 'series', | |
| 2444 'SOPInstanceUID' : 'instance' }), tags) | |
| 2445 self.assertEqual('patient', a[0]) | |
| 2446 self.assertFalse(a[4].startswith('Orthanc')) | |
| 2447 | |
| 2448 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2449 | |
| 2450 | |
| 2451 def test_shanon_2(self): | |
| 2452 def Modify(instance, replacements = {}): | |
| 119 | 2453 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { |
| 2454 'Replace' : replacements, | |
| 2455 'Force': True, | |
| 2456 }, 'application/json') | |
| 14 | 2457 |
| 2458 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) | |
| 2459 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 2460 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2461 | |
| 2462 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ] | |
| 2463 ids = [ 'ozp00SjY2xG', | |
| 2464 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 2465 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 2466 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ] | |
| 2467 | |
| 2468 a = ExtractDicomTags(Modify(u), tags) | |
| 2469 self.assertEqual(ids[0], a[0]) | |
| 2470 self.assertEqual(ids[1], a[1]) | |
| 2471 self.assertEqual(ids[2], a[2]) | |
| 2472 self.assertNotEqual(ids[3], a[3]) | |
| 2473 self.assertEqual(0, len(a[4])) | |
| 2474 | |
| 2475 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags) | |
| 2476 self.assertEqual(ids[0], a[0]) | |
| 2477 self.assertEqual(ids[1], a[1]) | |
| 2478 self.assertEqual(ids[2], a[2]) | |
| 2479 self.assertEqual('instance', a[3]) | |
| 2480 | |
| 2481 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags) | |
| 2482 self.assertEqual(ids[0], a[0]) | |
| 2483 self.assertEqual(ids[1], a[1]) | |
| 2484 self.assertEqual('series', a[2]) | |
| 2485 self.assertNotEqual(ids[3], a[3]) | |
| 2486 | |
| 2487 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags) | |
| 2488 self.assertEqual(ids[0], a[0]) | |
| 2489 self.assertEqual('study', a[1]) | |
| 2490 self.assertNotEqual(ids[2], a[2]) | |
| 2491 self.assertNotEqual(ids[3], a[3]) | |
| 2492 | |
| 2493 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags) | |
| 2494 self.assertEqual('patient', a[0]) | |
| 2495 self.assertNotEqual(ids[1], a[1]) | |
| 2496 self.assertNotEqual(ids[2], a[2]) | |
| 2497 self.assertNotEqual(ids[3], a[3]) | |
| 2498 | |
| 2499 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient', | |
| 2500 'StudyInstanceUID' : 'study', | |
| 2501 'SeriesInstanceUID' : 'series', | |
| 2502 'SOPInstanceUID' : 'instance' }), tags) | |
| 2503 self.assertEqual('patient', a[0]) | |
| 2504 self.assertEqual('study', a[1]) | |
| 2505 self.assertEqual('series', a[2]) | |
| 2506 self.assertEqual('instance', a[3]) | |
| 2507 | |
| 2508 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 2509 | |
| 2510 | |
| 2511 def test_instances_tags(self): | |
| 2512 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] | |
| 2513 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] | |
| 2514 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID'] | |
| 2515 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID'] | |
| 2516 | |
| 2517 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0]) | |
| 2518 self.assertEqual(2, len(i)) | |
| 2519 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2520 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2521 | |
| 2522 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0]) | |
| 2523 self.assertEqual(2, len(i)) | |
| 2524 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2525 self.assertEqual('887', i[i.keys()[1]]['PatientID']) | |
| 2526 | |
| 2527 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 2528 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0]) | |
| 2529 self.assertEqual(1, len(i)) | |
| 2530 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2531 | |
| 2532 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1]) | |
| 2533 self.assertEqual(1, len(i)) | |
| 2534 self.assertEqual('887', i[i.keys()[0]]['PatientID']) | |
| 2535 | |
|
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2536 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1]) |
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2537 self.assertEqual(1, len(i)) |
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2538 self.assertEqual('887', i[i.keys()[0]]['0010,0020']) |
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2539 |
| 14 | 2540 |
| 2541 def test_lookup(self): | |
| 2542 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2543 self.assertEqual(0, len(a)) | |
| 2544 | |
| 2545 UploadInstance(_REMOTE, 'DummyCT.dcm') | |
| 2546 | |
| 2547 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG') | |
| 2548 self.assertEqual(1, len(a)) | |
| 2549 self.assertEqual('Patient', a[0]['Type']) | |
| 2550 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID']) | |
| 2551 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path']) | |
| 2552 | |
| 2553 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390') | |
| 2554 self.assertEqual(1, len(a)) | |
| 2555 self.assertEqual('Study', a[0]['Type']) | |
| 2556 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID']) | |
| 2557 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path']) | |
| 2558 | |
| 2559 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394') | |
| 2560 self.assertEqual(1, len(a)) | |
| 2561 self.assertEqual('Series', a[0]['Type']) | |
| 2562 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID']) | |
| 2563 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path']) | |
| 2564 | |
| 2565 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109') | |
| 2566 self.assertEqual(1, len(a)) | |
| 2567 self.assertEqual('Instance', a[0]['Type']) | |
| 2568 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID']) | |
| 2569 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path']) | |
| 2570 | |
| 2571 DropOrthanc(_REMOTE) | |
| 2572 a = DoPost(_REMOTE, '/tools/lookup', '3113719P') | |
| 2573 self.assertEqual(0, len(a)) | |
| 2574 | |
| 15 | 2575 |
| 2576 def test_autorouting(self): | |
| 2577 knee1 = 'Knee/T1/IM-0001-0001.dcm' | |
| 2578 knee2 = 'Knee/T2/IM-0001-0002.dcm' | |
| 2579 other = 'Brainix/Flair/IM-0001-0001.dcm' | |
| 2580 | |
| 2581 # Check that this version is >= 0.8.0 | |
| 2582 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob')) | |
| 2583 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities')) | |
| 2584 | |
| 2585 UploadInstance(_REMOTE, knee1) | |
| 2586 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2587 | |
| 2588 DropOrthanc(_REMOTE) | |
| 2589 DropOrthanc(_LOCAL) | |
| 174 | 2590 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua') |
| 15 | 2591 UploadInstance(_REMOTE, knee1) |
| 2592 UploadInstance(_REMOTE, knee2) | |
| 2593 UploadInstance(_REMOTE, other) | |
| 2594 WaitEmpty(_REMOTE) | |
| 174 | 2595 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2596 self.assertEqual(3, len(DoGet(_LOCAL, '/instances'))) |
| 2597 | |
| 2598 DropOrthanc(_REMOTE) | |
| 2599 DropOrthanc(_LOCAL) | |
| 174 | 2600 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua') |
| 15 | 2601 UploadInstance(_REMOTE, knee1) |
| 2602 UploadInstance(_REMOTE, knee2) | |
| 2603 UploadInstance(_REMOTE, other) | |
| 2604 WaitEmpty(_REMOTE) | |
| 174 | 2605 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2606 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
| 2607 | |
| 2608 DropOrthanc(_REMOTE) | |
| 2609 DropOrthanc(_LOCAL) | |
| 174 | 2610 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua') |
| 15 | 2611 UploadInstance(_REMOTE, knee1) |
| 2612 WaitEmpty(_REMOTE) | |
| 174 | 2613 UninstallLuaCallbacks(_REMOTE) |
| 15 | 2614 i = DoGet(_LOCAL, '/instances') |
| 2615 self.assertEqual(1, len(i)) | |
| 2616 | |
| 2617 with tempfile.NamedTemporaryFile(delete = True) as f: | |
| 2618 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0])) | |
| 2619 f.flush() | |
| 45 | 2620 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ]) |
| 15 | 2621 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip()) |
| 2622 self.assertEqual(None, re.search('"MilitaryRank"', routed)) | |
| 2623 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag | |
| 17 | 2624 |
| 2625 | |
| 2626 def test_storescu_rf(self): | |
| 2627 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] | |
| 2628 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 2629 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') | |
| 2630 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 18 | 2631 |
| 2632 | |
| 2633 def test_anonymize_instance(self): | |
| 2634 def AnonymizeAndUpload(instanceId, parameters): | |
| 2635 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters, | |
| 2636 'application/json'), 'application/dicom')['ID'] | |
| 2637 | |
| 2638 def ModifyAndUpload(instanceId, parameters): | |
| 2639 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters, | |
| 2640 'application/json'), 'application/dicom')['ID'] | |
| 2641 | |
| 2642 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
| 2643 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a) | |
| 2644 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag | |
| 2645 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a) | |
| 2646 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a) | |
| 2647 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2648 | |
| 2649 b = AnonymizeAndUpload(a, '{}') | |
| 2650 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2651 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2652 | |
| 2653 # Keep private tag (only OK since Orthanc 0.8.0) | |
| 2654 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}') | |
| 2655 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2656 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2657 | |
| 2658 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}') | |
| 2659 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2660 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2661 | |
| 2662 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}') | |
| 2663 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b)) | |
| 2664 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello')) | |
| 2665 | |
| 2666 # Examples from the Wiki | |
|
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2667 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}') |
| 18 | 2668 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2669 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2670 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2671 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2672 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2673 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2674 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a) | |
| 2675 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2676 | |
|
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2677 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}') |
| 18 | 2678 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2679 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2680 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2681 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b)) | |
| 2682 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b)) | |
| 2683 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2684 | |
|
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|
2685 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}') |
| 18 | 2686 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip()) |
| 2687 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip()) | |
| 2688 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b)) | |
| 2689 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b)) | |
| 2690 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b)) | |
| 2691 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b)) | |
| 2692 | |
| 2693 | |
| 2694 # Test modify non-existing | |
| 2695 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 2696 json.dumps({ | |
| 2697 'PatientName' : 'Jodogne', | |
| 2698 'Modality' : 'CT', | |
| 2699 }))['ID'] | |
| 2700 | |
| 2701 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip()) | |
| 2702 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i)) | |
| 2703 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip()) | |
| 2704 | |
| 2705 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}') | |
| 2706 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip()) | |
| 2707 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip()) | |
| 2708 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip()) | |
| 2709 | |
|
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2710 |
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2711 def test_incoming_jpeg(self): |
|
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2712 # since this test fails regularly on CI, enable verbosity |
|
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2713 DoPut(_REMOTE, '/tools/log-level', 'verbose') |
|
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2714 |
|
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2715 def storescu(image, acceptUnknownSopClassUid, expectSuccess = True, retries = 1): |
|
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2716 if acceptUnknownSopClassUid: |
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2717 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ] |
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2718 else: |
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2719 tmp = [ '-xs' ] |
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2720 |
|
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2721 while retries > 0: |
|
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2722 retries -= 1 |
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2723 with open(os.devnull, 'w') as FNULL: |
|
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2724 try: |
|
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2725 subprocess.check_call([ FindExecutable('storescu') ] + tmp + |
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2726 [ _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
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2727 GetDatabasePath(image) ], |
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2728 stderr = FNULL) |
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2729 |
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2730 if expectSuccess: |
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2731 return |
|
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2732 except subprocess.CalledProcessError as e: |
|
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2733 print('storescu failed with error code: %s' % str(e.returncode)) |
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2734 if not expectSuccess: |
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2735 raise e |
|
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2736 |
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2737 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2738 |
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2739 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
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2740 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', [ |
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2741 '1.2.840.10008.1.2', '1.2.840.10008.1.2.1', '1.2.840.10008.1.2.2' |
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2742 ]) |
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2743 self.assertTrue('1.2.840.10008.1.2' in a) |
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2744 self.assertTrue('1.2.840.10008.1.2.1' in a) |
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2745 self.assertTrue('1.2.840.10008.1.2.2' in a) |
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2746 self.assertEqual(3, len(a)) |
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2747 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'nope')) |
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2748 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', '0') |
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2749 self.assertEqual(0, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
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2750 else: |
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2751 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua') |
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2752 |
| 490 | 2753 # the following line regularly fails on CI because storescu still returns 0 although the C-Store fails -> that's why we have implemented retries |
|
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2754 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False, False, 3)) |
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2755 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True, False, 3)) |
|
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2756 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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2757 |
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|
2758 if IsOrthancVersionAbove(_REMOTE, 1, 9, 0): |
| 374 | 2759 a = DoPut(_REMOTE, '/tools/accepted-transfer-syntaxes', '*', 'text/plain') |
|
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2760 self.assertGreaterEqual(42, len(a)) |
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2761 DoPut(_REMOTE, '/tools/unknown-sop-class-accepted', 'true') |
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diff
changeset
|
2762 self.assertEqual(1, DoGet(_REMOTE, '/tools/unknown-sop-class-accepted')) |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2763 else: |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2764 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua') |
|
f673153f27a4
use of /tools/unknown-sop-class-accepted and /tools/accepted-transfer-syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
372
diff
changeset
|
2765 |
|
62
f9c4ce95756f
removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
61
diff
changeset
|
2766 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')") |
|
61
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2767 storescu('Knix/Loc/IM-0001-0001.dcm', False) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2768 storescu('UnknownSopClassUid.dcm', True) |
|
967d44407308
test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
60
diff
changeset
|
2769 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2770 |
|
463
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2771 # set back normal verbosity |
|
29aaa3df718f
added verbosity and retries for test sometimes failing on CI
Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
2772 DoPut(_REMOTE, '/tools/log-level', 'default') |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2773 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2774 def test_storescu_jpeg(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2775 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2776 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2777 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
| 64 | 2778 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
| 2779 | |
| 2780 # This is JPEG lossless | |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2781 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value']) |
| 64 | 2782 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID']) |
|
136
5634ef96fcc5
testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
133
diff
changeset
|
2783 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010']) |
| 64 | 2784 |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2785 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2786 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2787 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2788 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2789 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2790 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2791 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ]) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2792 self.assertEqual(5, len(DoGet(_LOCAL, '/instances'))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2793 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2794 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2795 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2796 DropOrthanc(_REMOTE) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2797 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2798 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2799 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2800 def test_pixel_data(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2801 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2802 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2803 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2804 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2805 phenixSize = 358 * 512 * 2 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2806 colorSize = 1000 * 1000 * 3 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2807 jpegSize = 51918 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2808 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2809 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2810 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2811 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2812 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2813 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2814 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2815 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2816 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2817 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2818 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2819 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2820 def test_decode_brainix(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2821 brainix = [ |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2822 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*) |
| 384 | 2823 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6) => doesn't work on big-endian |
|
21
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2824 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2825 ] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2826 h = '6fb11b932d535c2be04beabd99793ff8' |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2827 maxValue = 426.0 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2828 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2829 truth = Image.open(GetDatabasePath('Formats/Brainix.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2830 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2831 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2832 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2833 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2834 truth2 = map(lambda x: min(255, x), truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2835 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2836 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2837 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2838 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2839 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2840 self.AssertSameImages(truth2, '/instances/%s/preview' % i) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2841 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2842 for i in brainix: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2843 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2844 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2845 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2846 def test_decode_color(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2847 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2848 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2849 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2850 for i in [ imagej, color ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2851 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]: |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2852 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2853 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2854 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2855 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2856 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2857 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2858 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2859 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2860 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2861 def test_decode_rf(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2862 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2863 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2864 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2865 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2866 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2867 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2868 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2869 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2870 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2871 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2872 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2873 def test_decode_multiframe(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2874 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2875 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2876 # Test the first frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2877 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2878 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2879 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2880 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2881 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2882 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf))) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2883 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2884 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2885 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2886 # Test the last frame |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2887 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2888 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2889 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2890 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2891 def test_decode_signed(self): |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2892 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID'] |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2893 minValue = -2000 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2894 maxValue = 4042 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2895 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2896 truth = Image.open(GetDatabasePath('Formats/SignedCT.png')) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2897 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2898 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2899 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2900 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2901 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2902 truth3 = map(lambda x: 255 if x >= 256 else x, truth2) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2903 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2904 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2905 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata()) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2906 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2907 self.AssertSameImages(tmp, '/instances/%s/preview' % signed) |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2908 |
|
2a29bcff60a7
tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
18
diff
changeset
|
2909 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed))) |
| 22 | 2910 |
| 2911 | |
|
46
85b2e36ed392
explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
45
diff
changeset
|
2912 def test_googlecode_issue_32(self): |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2913 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2914 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2915 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2916 |
| 22 | 2917 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
| 2918 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) | |
| 2919 self.assertEqual(u'Рентгенография', tags['SeriesDescription']) | |
| 2920 self.assertEqual(u'Таз', tags['BodyPartExamined']) | |
| 2921 self.assertEqual(u'Прямая', tags['ViewPosition']) | |
| 2922 | |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2923 # Replay the same test using Latin1 as default encoding: This must fail |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2924 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2925 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2926 DoDelete(_REMOTE, '/instances/%s' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2927 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID'] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2928 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2929 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription']) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2930 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
2931 |
| 22 | 2932 def test_encodings(self): |
| 23 | 2933 # Latin-1 (ISO_IR 100) |
| 22 | 2934 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 2935 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix) | |
| 2936 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription']) | |
| 23 | 2937 |
| 2938 # Latin-2 (ISO_IR 101) | |
| 2939 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] | |
| 2940 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a) | |
| 2941 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format - | |
| 2942 self.assertEqual('Imię i Nazwisko osoby opisującej', | |
| 2943 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8')) | |
| 2944 | |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2945 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2946 def test_storescu_custom_aet(self): |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2947 # This tests a feature introduced in Orthanc 0.9.1: "Custom |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2948 # setting of the local AET during C-Store SCU (both in Lua and |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2949 # in the REST API)." |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2950 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2951 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2952 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2953 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2954 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2955 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2956 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2957 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2958 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2959 'LocalAet' : 'YOP', |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2960 'Resources' : [ a['ID'], b['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2961 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2962 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2963 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2964 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2965 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2966 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2967 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2968 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2969 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2970 'Resources' : [ c['ID'] ] |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2971 }) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2972 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2973 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2974 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2975 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2976 DropOrthanc(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2977 DropOrthanc(_LOCAL) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2978 |
| 174 | 2979 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua') |
|
26
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2980 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2981 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2982 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2983 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2984 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2985 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2986 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID'])) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2987 |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2988 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2989 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2990 WaitEmpty(_REMOTE) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2991 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
040f6ef1394a
test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
23
diff
changeset
|
2992 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID'])) |
|
34
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diff
changeset
|
2993 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2994 def test_resources_since_limit(self): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
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diff
changeset
|
2995 # Upload 16 instances |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
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parents:
28
diff
changeset
|
2996 for i in range(4): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2997 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2998 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
2999 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3000 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3001 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3002 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3003 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3004 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3005 self.assertEqual(16, len(DoGet(_REMOTE, '/instances'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3006 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3007 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3008 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3009 |
| 675 | 3010 if not IsOrthancVersionAbove(_REMOTE, 1, 12, 5): # with ExtendedFind, the limit=0 means no-limit like in /tools/find |
| 3011 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0'))) | |
|
34
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3012 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3013 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3014 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3015 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3016 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3017 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3018 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3019 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3020 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3021 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3022 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3023 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3024 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3025 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100'))) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3026 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3027 for limit in [ 1, 2, 3, 7, 16, 17 ]: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3028 s = {} |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3029 since = 0 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3030 while True: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3031 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3032 if len(t) == 0: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3033 break |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3034 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3035 since += len(t) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3036 for i in t: |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3037 s[i] = None |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3038 |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3039 self.assertEqual(16, len(s)) |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3040 for instance in DoGet(_REMOTE, '/instances'): |
|
1047d7bc5210
test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
28
diff
changeset
|
3041 self.assertTrue(instance in s) |
| 36 | 3042 |
| 3043 | |
| 3044 def test_create_pdf(self): | |
| 3045 # Upload 4 instances | |
| 3046 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 3047 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3048 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3049 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3050 | |
| 3051 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0' | |
| 3052 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' | |
| 3053 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8' | |
| 3054 | |
| 3055 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: | |
| 3056 pdf = f.read() | |
| 3057 | |
| 3058 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3059 json.dumps({ | |
| 3060 'Tags' : { | |
| 3061 'PatientName' : 'Jodogne', | |
| 3062 'Modality' : 'CT', | |
| 3063 }, | |
| 3064 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3065 })) | |
| 3066 | |
| 3067 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
|
565
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3068 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.1', DoGet(_REMOTE, '/instances/%s/content/SOPClassUID' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
3069 self.assertEqual('WSD', DoGet(_REMOTE, '/instances/%s/content/ConversionType' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3070 self.assertEqual('application/pdf', DoGet(_REMOTE, '/instances/%s/content/MIMETypeOfEncapsulatedDocument' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
3071 |
|
446
9184e6cb215a
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3072 # In Orthanc <= 1.9.7, the "CT" would have been replaced by "OT" |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3073 # https://groups.google.com/g/orthanc-users/c/eNSddNrQDtM/m/wc1HahimAAAJ |
|
9184e6cb215a
allow custom value for "Modality" in /tools/create-dicom for PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
445
diff
changeset
|
3074 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
| 36 | 3075 |
| 3076 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID']) | |
| 3077 self.assertEqual(len(b), len(pdf) + 1) | |
| 3078 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0')) | |
| 3079 | |
| 3080 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom', | |
| 3081 json.dumps({ | |
| 3082 'Parent' : brainixPatient, | |
| 3083 'Tags' : { | |
| 3084 'PatientName' : 'Jodogne', | |
| 3085 } | |
| 3086 }))) | |
| 3087 | |
| 3088 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3089 json.dumps({ | |
| 3090 'Parent' : brainixPatient, | |
| 3091 'Tags' : { 'StudyDescription' : 'PDF^Patient' }, | |
| 3092 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3093 })) | |
| 3094 | |
| 3095 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID']) | |
|
565
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
3096 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.1', DoGet(_REMOTE, '/instances/%s/content/SOPClassUID' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
3097 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip('\x00')) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
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557
diff
changeset
|
3098 self.assertEqual('WSD', DoGet(_REMOTE, '/instances/%s/content/ConversionType' % i['ID']).strip()) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
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557
diff
changeset
|
3099 self.assertEqual('application/pdf', DoGet(_REMOTE, '/instances/%s/content/MIMETypeOfEncapsulatedDocument' % i['ID']).strip()) |
| 36 | 3100 |
| 3101 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3102 json.dumps({ | |
| 3103 'Parent' : brainixStudy, | |
| 3104 'Tags' : { 'SeriesDescription' : 'PDF^Study' }, | |
| 3105 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) | |
| 3106 })) | |
| 3107 | |
| 3108 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID']) | |
| 3109 | |
| 3110 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3111 json.dumps({ | |
| 3112 'Parent' : brainixEpi, | |
| 37 | 3113 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' }, |
| 36 | 3114 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
| 3115 })) | |
| 3116 | |
| 3117 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID']) | |
| 3118 | |
| 3119 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID']) | |
| 3120 self.assertEqual(len(b), len(pdf)) | |
| 3121 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf)) | |
| 3122 | |
| 3123 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance)) | |
| 38 | 3124 |
| 3125 | |
| 3126 def test_create_series(self): | |
| 3127 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3128 json.dumps({ | |
| 3129 'Tags' : { | |
| 40 | 3130 'SpecificCharacterSet' : 'ISO_IR 100', |
| 3131 'PatientName' : 'Sébastien Jodogne', | |
| 38 | 3132 'Modality' : 'CT', |
| 3133 }, | |
| 3134 'Content' : [ | |
| 40 | 3135 { |
| 3136 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA | |
| 3137 'Tags' : { 'ImageComments' : 'Tutu' } | |
| 3138 }, | |
| 38 | 3139 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=', |
| 3140 ] | |
| 3141 })) | |
| 3142 | |
| 3143 s = DoGet(_REMOTE, i['Path']) | |
| 3144 self.assertEqual('Series', s['Type']) | |
| 3145 self.assertEqual(s['ID'], i['ID']) | |
| 3146 self.assertEqual(2, len(s['Instances'])) | |
| 39 | 3147 self.assertEqual(2, s['ExpectedNumberOfInstances']) |
| 3148 self.assertEqual('Complete', s['Status']) | |
| 40 | 3149 |
| 3150 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0]) | |
| 3151 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1]) | |
| 3152 self.assertTrue('ImageComments' in a or 'ImageComments' in b) | |
| 3153 if 'ImageComments' in a: | |
| 3154 self.assertEqual('Tutu', a['ImageComments']) | |
| 3155 else: | |
| 3156 self.assertEqual('Tutu', b['ImageComments']) | |
| 3157 | |
| 3158 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0]) | |
| 3159 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'), | |
| 3160 'Sébastien Jodogne') | |
| 47 | 3161 |
| 3162 | |
| 3163 def test_create_binary(self): | |
| 3164 binary = ''.join(map(chr, range(256))) | |
| 3165 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary) | |
| 3166 tags = { | |
| 3167 'PatientName' : 'Jodogne', | |
| 3168 '8899-8899' : encoded | |
| 3169 } | |
| 3170 | |
| 3171 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3172 json.dumps({ | |
| 266 | 3173 'Tags' : tags, |
| 3174 'PrivateCreator' : 'TestBinary', | |
| 47 | 3175 })) |
| 3176 | |
| 3177 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 3178 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip()) | |
| 3179 | |
| 3180 i = DoPost(_REMOTE, '/tools/create-dicom', | |
| 3181 json.dumps({ | |
| 3182 'InterpretBinaryTags' : False, | |
| 266 | 3183 'Tags' : tags, |
| 3184 'PrivateCreator' : 'TestBinary', | |
| 47 | 3185 })) |
| 3186 | |
| 3187 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) | |
| 3188 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1]) | |
|
48
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3189 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3190 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3191 def test_patient_ids_collision(self): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3192 # Upload 3 instances from 3 different studies, but with the |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3193 # same PatientID |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3194 for i in range(3): |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3195 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3196 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3197 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3198 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3199 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3200 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3201 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3202 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3203 'CaseSensitive' : True, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3204 'Query' : { 'PatientName' : 'FOO\\HELLO' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3205 self.assertEqual(2, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3206 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3207 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3208 'CaseSensitive' : False, |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3209 'Query' : { 'PatientName' : 'Foo' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3210 self.assertEqual(1, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3211 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3212 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3213 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID']) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3214 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3215 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3216 'Query' : { 'PatientName' : '*' }}) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3217 self.assertEqual(3, len(a)) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3218 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3219 self.assertTrue('FOO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3220 self.assertTrue('HELLO^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3221 self.assertTrue('WORLD^SERIES' in d) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3222 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3223 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3224 self.assertEqual(1, len(set(d))) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3225 self.assertEqual('COMMON', d[0]) |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3226 |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3227 for i in a: |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3228 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3229 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName'] |
|
e4352463ff74
test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
47
diff
changeset
|
3230 self.assertEqual('%s^SERIES' % p, d) |
|
49
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3231 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3232 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3233 def test_bitbucket_issue_4(self): |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3234 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3235 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3236 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3237 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3238 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3239 UploadInstance(_REMOTE, 'Formats/Rle.dcm') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3240 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3241 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3242 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3243 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3244 p = DoGet(_REMOTE, '/patients') |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3245 self.assertEqual(2, len(p)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3246 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3247 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1])) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3248 self.assertEqual(3, len(i1)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3249 self.assertEqual(3, len(i2)) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3250 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3251 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3]) |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3252 |
|
e7f9b8199545
test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
48
diff
changeset
|
3253 self.assertEqual(6, len(DoGet(_LOCAL, '/instances'))) |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3254 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3255 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3256 def test_create_sequence(self): |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3257 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3258 json.dumps({ |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3259 'Tags' : { |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3260 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3261 'PatientName': 'Jodogne^', |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3262 'ReferencedStudySequence': GenerateTestSequence(), |
|
50
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3263 } |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3264 }))['ID'] |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3265 |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3266 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3267 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3268 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3269 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i)) |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3270 self.assertEqual(u'Sébastien^'.encode('latin-1'), |
|
8de63d56cf11
test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
49
diff
changeset
|
3271 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i)) |
|
51
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3272 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3273 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3274 def test_modify_sequence(self): |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3275 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3276 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i)) |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3277 |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3278 j = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3279 json.dumps({ |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3280 "Replace" : { |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3281 "PatientName" : "hello", |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3282 'ReferencedStudySequence': GenerateTestSequence(), |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3283 }, |
|
264a20a0276d
test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
50
diff
changeset
|
3284 }), |
|
264a20a0276d
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diff
changeset
|
3285 'application/json') |
|
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diff
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|
3286 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID'] |
|
264a20a0276d
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diff
changeset
|
3287 DoDelete(_REMOTE, '/instances/%s' % i) |
|
264a20a0276d
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diff
changeset
|
3288 |
| 52 | 3289 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j))) |
| 3290 | |
| 3291 | |
| 3292 def test_compression(self): | |
| 3293 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] | |
| 3294 | |
|
380
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|
3295 aa = DoGet(_REMOTE, '/instances/%s/attachments/' % i) |
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|
3296 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
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|
3297 # This file has *no* pixel data, so "dicom-until-pixel-data" is not stored |
|
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|
3298 self.assertEqual(1, len(aa)) |
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|
3299 self.assertTrue('dicom' in aa) |
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|
3300 else: |
|
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|
3301 self.assertEqual(2, len(aa)) |
|
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|
3302 self.assertTrue('dicom' in aa) |
|
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|
3303 self.assertTrue('dicom-as-json' in aa) |
|
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|
3304 |
|
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|
3305 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/data' % i)[1] |
|
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|
3306 |
|
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diff
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|
3307 # If "StorageCompression" is enabled in the Orthanc to be |
|
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|
3308 # tested, uncompress the attachment before running the test |
|
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diff
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|
3309 if DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i) != 0: |
|
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diff
changeset
|
3310 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
| 52 | 3311 |
|
380
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|
3312 cs = int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']) |
|
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|
3313 us = int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']) |
|
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|
3314 size = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i)) |
|
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|
3315 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i) |
|
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|
3316 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3317 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3318 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3319 |
|
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|
3320 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom' % i) |
| 52 | 3321 self.assertTrue('compress' in ops) |
| 3322 self.assertTrue('uncompress' in ops) | |
| 3323 self.assertTrue('is-compressed' in ops) | |
|
380
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|
3324 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3325 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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|
3326 |
|
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|
3327 # Re-compress the attachment |
|
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|
3328 DoPost(_REMOTE, '/instances/%s/attachments/dicom/compress' % i) |
|
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|
3329 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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|
3330 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3331 self.assertGreater(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
|
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|
3332 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
|
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|
3333 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1])) |
|
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|
3334 self.assertGreater(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3335 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3336 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3337 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3338 |
|
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|
3339 DoPost(_REMOTE, '/instances/%s/attachments/dicom/uncompress' % i) |
|
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|
3340 DoPost(_REMOTE, '/instances/%s/attachments/dicom/verify-md5' % i) |
|
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|
3341 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % i)) |
|
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|
3342 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/compressed-data' % i)[1]) |
|
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|
3343 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-size' % i))) |
|
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|
3344 self.assertEqual(size, int(DoGet(_REMOTE, '/instances/%s/attachments/dicom/size' % i))) |
|
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|
3345 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/md5' % i)) |
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|
3346 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom/compressed-md5' % i)) |
|
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|
3347 self.assertEqual(cs, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize'])) |
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|
3348 self.assertEqual(us, int(DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])) |
| 53 | 3349 |
| 3350 | |
| 3351 def test_ordered_slices(self): | |
| 3352 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3353 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3354 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3355 self.assertEqual('Sequence', o['Type']) | |
| 3356 self.assertEqual(1, len(o['Dicom'])) | |
| 3357 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0]) | |
| 3358 self.assertEqual(76, len(o['Slices'])) | |
| 3359 for j in range(76): | |
| 3360 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j]) | |
| 3361 | |
| 68 | 3362 self.assertEqual(1, len(o['SlicesShort'])) |
| 3363 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0]) | |
| 3364 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3365 self.assertEqual(76, o['SlicesShort'][0][2]) | |
| 3366 | |
| 53 | 3367 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
| 3368 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID'] | |
| 3369 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID'] | |
| 3370 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3371 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3372 | |
| 3373 self.assertEqual('Volume', o['Type']) | |
| 3374 self.assertEqual(3, len(o['Dicom'])) | |
| 3375 self.assertEqual(3, len(o['Slices'])) | |
| 3376 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2]) | |
| 3377 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3378 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0]) | |
| 3379 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2]) | |
| 3380 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
| 3381 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0]) | |
| 3382 | |
| 68 | 3383 self.assertEqual(3, len(o['SlicesShort'])) |
| 3384 self.assertEqual(k, o['SlicesShort'][0][0]) | |
| 3385 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3386 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3387 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3388 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3389 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3390 self.assertEqual(i, o['SlicesShort'][2][0]) | |
| 3391 self.assertEqual(0, o['SlicesShort'][2][1]) | |
| 3392 self.assertEqual(1, o['SlicesShort'][2][2]) | |
| 3393 | |
| 53 | 3394 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
| 3395 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID'] | |
| 3396 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'] | |
| 3397 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s) | |
| 3398 | |
| 3399 self.assertEqual('Sequence', o['Type']) | |
| 3400 self.assertEqual(2, len(o['Dicom'])) | |
| 3401 self.assertEqual(2, len(o['Slices'])) | |
| 3402 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0]) | |
| 3403 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1]) | |
| 3404 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0]) | |
| 3405 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1]) | |
|
54
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|
3406 |
| 68 | 3407 self.assertEqual(2, len(o['SlicesShort'])) |
| 3408 self.assertEqual(i, o['SlicesShort'][0][0]) | |
| 3409 self.assertEqual(0, o['SlicesShort'][0][1]) | |
| 3410 self.assertEqual(1, o['SlicesShort'][0][2]) | |
| 3411 self.assertEqual(j, o['SlicesShort'][1][0]) | |
| 3412 self.assertEqual(0, o['SlicesShort'][1][1]) | |
| 3413 self.assertEqual(1, o['SlicesShort'][1][2]) | |
| 3414 | |
| 3415 | |
|
54
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|
3416 |
|
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|
3417 def test_incoming_movescu_accession(self): |
|
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|
3418 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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|
3419 |
|
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|
3420 # No matching patient, so no job is created |
|
54
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|
3421 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3422 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ]) |
|
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changeset
|
3423 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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changeset
|
3424 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ]) |
|
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changeset
|
3425 self.assertEqual(0, len(DoGet(_LOCAL, '/patients'))) |
|
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|
3426 |
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changeset
|
3427 # 1 Matching patient, track the job |
| 138 | 3428 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
| 3429 '--study', | |
| 3430 '-k', '0008,0052=STUDY', | |
| 3431 '-k', 'AccessionNumber=A10003245599' | |
| 3432 ]))) | |
|
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|
3433 |
|
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changeset
|
3434 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
c5f8a6b0d85e
test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
53
diff
changeset
|
3435 |
| 55 | 3436 |
| 3437 def test_dicom_to_json(self): | |
| 3438 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] | |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3439 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID'] |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3440 |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3441 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3442 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3443 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
| 123 | 3444 # Tags for compatibility with DCMTK 3.6.0 |
| 3445 'RETIRED_OtherPatientIDs', | |
| 3446 'OtherPatientIDs', | |
| 3447 'ACR_NEMA_2C_VariablePixelDataGroupLength', | |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3448 ])) |
| 55 | 3449 |
| 3450 t = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 3451 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f: | |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3452 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3453 ])) |
| 55 | 3454 |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3455 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3456 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f: |
|
80
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3457 self.assertTrue(CompareTags(t, json.loads(f.read()), [ |
|
8466dbfcb22b
fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
79
diff
changeset
|
3458 ])) |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3459 |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3460 |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3461 # NB: To get the actual value of the "tags" JSON file, use the |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3462 # following command: |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3463 # $ curl http://alice:orthanctest@localhost:8042/instances/d29ead49-43e8601d-72f1e922-7de676ee-ea77c2b4/tags |
|
60
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3464 t = DoGet(_REMOTE, '/instances/%s/tags' % j) |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3465 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f: |
|
cd3c7f70f139
test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
59
diff
changeset
|
3466 a = json.loads(f.read()) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3467 |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3468 # Starting with Orthanc 1.9.1, the DICOM-as-JSON |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3469 # reports are truncated starting with PixelData |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3470 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3471 self.assertFalse('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3472 self.assertFalse('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3473 del a['7fe1,0010'] |
|
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3474 del a['7fe1,1001'] |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3475 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3476 self.assertTrue('7fe1,0010' in t) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3477 self.assertTrue('7fe1,1001' in t) |
|
378
a4b8450a1158
fix test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
377
diff
changeset
|
3478 |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3479 aa = json.dumps(a).replace('2e+022', '2e+22') |
|
372
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3480 tt = (json.dumps(t) |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3481 .replace('2e+022', '2e+22') |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3482 # The "IllegalPrivatePixelSequence" tag was introduced in DCMTK 3.6.6 dictionary |
|
e9b03d8f3b78
fix for DCMTK 3.6.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
369
diff
changeset
|
3483 .replace('IllegalPrivatePixelSequence', 'Unknown Tag & Data')) |
|
65
09fc27e0899a
patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
64
diff
changeset
|
3484 self.assertEqual(aa, tt) |
| 57 | 3485 |
| 3486 | |
| 3487 def test_batch_archive(self): | |
| 3488 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 3489 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') | |
| 3490 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3491 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm') | |
| 3492 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3493 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 3494 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3495 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3496 | |
| 3497 s = DoPost(_REMOTE, '/tools/create-archive', [ ]) | |
| 3498 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3499 self.assertEqual(0, len(z.namelist())) | |
| 3500 | |
| 3501 # One patient | |
| 3502 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ]) | |
| 3503 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3504 self.assertEqual(4, len(z.namelist())) | |
| 3505 | |
| 3506 # One patient + twice its study + one series from other patient | |
| 3507 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3508 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3509 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918', | |
| 3510 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' | |
| 3511 ]) | |
| 3512 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3513 self.assertEqual(6, len(z.namelist())) | |
| 3514 | |
| 3515 # One patient + one series + one instance | |
| 3516 s = DoPost(_REMOTE, '/tools/create-archive', [ | |
| 3517 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17', | |
| 3518 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0', | |
| 3519 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87' | |
| 3520 ]) | |
| 3521 z = zipfile.ZipFile(StringIO(s), "r") | |
| 3522 self.assertEqual(7, len(z.namelist())) | |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3523 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3524 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3525 s = DoGet(_REMOTE, '/tools/create-archive?resources=ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17,1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0,1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87') |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3526 z = zipfile.ZipFile(StringIO(s), "r") |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3527 self.assertEqual(7, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3528 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
3529 |
|
59
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3530 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3531 def test_decode_brainix_as_jpeg(self): |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3532 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3533 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3534 j = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3535 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3536 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3537 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3538 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3539 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3540 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3541 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3542 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3543 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3544 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3545 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3546 self.assertEqual('PNG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3547 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3548 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3549 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3550 self.assertEqual(j.size[0], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3551 self.assertEqual(j.size[1], 256) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3552 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3553 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3554 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3555 self.assertLess(a, b) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3556 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3557 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' }) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3558 self.assertEqual('JPEG', j.format) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3559 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3560 # 16bit encoding is not supported with JPEG |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3561 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3562 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' })) |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3563 |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3564 # No matching content type |
|
84378ada15ab
test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
58
diff
changeset
|
3565 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' })) |
|
69
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3566 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3567 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3568 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3569 def test_media_encodings(self): |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3570 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3571 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3572 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID'] |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3573 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3574 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3575 z = zipfile.ZipFile(StringIO(tmp), "r") |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3576 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3577 self.assertEqual(4, len(z.namelist())) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3578 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3579 self.assertTrue('IMAGES/IM1' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3580 self.assertTrue('IMAGES/IM2' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3581 self.assertTrue('DICOMDIR' in z.namelist()) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3582 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3583 try: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3584 os.remove('/tmp/DICOMDIR') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3585 except: |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3586 # The file does not exist |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3587 pass |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3588 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3589 z.extract('DICOMDIR', '/tmp') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3590 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3591 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3592 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3593 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3594 stderr = subprocess.STDOUT).split('\n') |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3595 self.assertEqual(1, len(a)) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3596 self.assertEqual('', a[0]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3597 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3598 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3599 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3600 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3601 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None) |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3602 |
|
83fd88230097
test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
68
diff
changeset
|
3603 os.remove('/tmp/DICOMDIR') |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3604 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3605 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3606 def test_findscu_counters(self): |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3607 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3608 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3609 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3610 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3611 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3612 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3613 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3614 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3615 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3616 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3617 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3618 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3619 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3620 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3621 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3622 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3623 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3624 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3625 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3626 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3627 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3628 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3629 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3630 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3631 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3632 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3633 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3634 self.assertTrue('3 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3635 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3636 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3637 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3638 self.assertEqual(2, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3639 self.assertTrue('1 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3640 self.assertTrue('2 ' in s) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3641 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3642 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3643 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3644 self.assertEqual(1, len(s)) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3645 t = map(lambda x: x.strip(), s[0].split('\\')) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3646 self.assertTrue('PT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3647 self.assertTrue('CT' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3648 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3649 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ]) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3650 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3651 self.assertEqual(1, len(s)) |
|
176
48cc188ffb09
strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents:
175
diff
changeset
|
3652 t = map(lambda x: x.strip('\x00'), s[0].split('\\')) |
|
71
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3653 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3654 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t) |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3655 |
|
48740070cbf1
TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
70
diff
changeset
|
3656 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3657 def test_decode_transfer_syntax(self): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3658 def Check(t, md5): |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3659 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID'] |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3660 |
|
89
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3661 if t != '1.2.840.10008.1.2': # This file has no meta header |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3662 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3663 self.assertEqual(t, transferSyntax) |
|
74b7b9aed5f8
test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
87
diff
changeset
|
3664 |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3665 if md5 == None: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3666 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3667 else: |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3668 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i)) |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3669 self.assertEqual(m, md5) |
|
b89af51797ff
test_decode_transfer_syntax
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parents:
74
diff
changeset
|
3670 |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3671 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3672 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3673 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3674 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3675 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2') |
| 384 | 3676 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1 |
| 3677 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b') | |
| 3678 | |
| 3679 # The 3 checks below don't work on big-endian | |
| 3680 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b') # TODO - Doesn't work with GDCM 3.0.7 alone | |
|
78
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3681 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e') |
|
b89af51797ff
test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
74
diff
changeset
|
3682 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca') |
|
299
c2144cf4bd83
HasGdcmPlugin() test
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diff
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|
3683 |
|
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diff
changeset
|
3684 # JPEG2k image, not supported without GDCM plugin |
| 304 | 3685 if not HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
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293
diff
changeset
|
3686 Check('1.2.840.10008.1.2.4.90', None) |
|
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|
3687 Check('1.2.840.10008.1.2.4.91', None) |
| 79 | 3688 |
| 3689 | |
| 3690 def test_raw_frame(self): | |
| 3691 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID'] | |
| 3692 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3693 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3694 self.assertEqual(512 * 512 * 2, len(a)) | |
| 3695 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s))) | |
| 3696 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s)) | |
| 3697 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a)) | |
| 3698 | |
| 3699 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID'] | |
| 3700 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3701 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s))) | |
| 3702 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s))) | |
| 3703 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s)) | |
| 3704 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3705 self.assertEqual("L", im.mode) | |
| 3706 self.assertEqual(512, im.size[0]) | |
| 3707 self.assertEqual(512, im.size[1]) | |
| 3708 | |
| 3709 # Test an image with 2 JPEG frames spread over multiple fragments | |
| 3710 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID'] | |
| 3711 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s))) | |
| 3712 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3713 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s) | |
| 3714 self.assertEqual(69214, len(a)) | |
| 3715 self.assertEqual(ComputeMD5(a), ComputeMD5(b)) | |
| 3716 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s)) | |
| 3717 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s) | |
| 3718 self.assertEqual("RGB", im.mode) | |
| 3719 self.assertEqual(512, im.size[0]) | |
| 3720 self.assertEqual(512, im.size[1]) | |
| 323 | 3721 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s) # TODO - Doesn't work with GDCM 3.0.7 alone |
| 79 | 3722 self.assertEqual("RGB", im.mode) |
| 3723 self.assertEqual(512, im.size[0]) | |
| 3724 self.assertEqual(512, im.size[1]) | |
| 81 | 3725 |
| 3726 | |
| 3727 | |
| 3728 def test_rest_movescu(self): | |
| 3729 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3730 | |
| 3731 # Upload 4 instances | |
| 3732 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 3733 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 3734 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 3735 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 3736 | |
| 3737 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
| 3738 for p in DoGet(_REMOTE, '/patients'): | |
| 3739 DoPost(_REMOTE, '/modalities/orthanctest/store', p) | |
| 3740 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3741 | |
| 3742 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3743 | |
|
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|
3744 # Move instance Brainix/Flair/IM-0001-0001.dcm |
|
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parents:
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diff
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|
3745 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
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added test for asynchronous cmove
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parents:
473
diff
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|
3746 'Level' : 'Instance', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3747 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3748 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3749 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
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added test for asynchronous cmove
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parents:
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|
3750 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
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parents:
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diff
changeset
|
3751 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
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diff
changeset
|
3752 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3753 ]}) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3754 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
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diff
changeset
|
3755 # Move series Brainix/Flair/* |
| 81 | 3756 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
| 3757 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3758 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3759 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 3760 | |
|
482
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3761 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
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parents:
473
diff
changeset
|
3762 # Reset and test asynchronous C-Move at instance level |
|
535e651e70a2
added test for asynchronous cmove
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parents:
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diff
changeset
|
3763 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3764 DoDelete(_REMOTE, '/patients/%s' % p) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3765 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3766 DoPost(_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3767 'Level' : 'Instance', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3768 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3769 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3770 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3771 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3772 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3773 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3774 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3775 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3776 }) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3777 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3778 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3779 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3780 'Level' : 'Instance', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3781 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3782 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3783 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3784 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3785 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3786 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3787 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3788 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3789 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3790 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3791 self.assertNotEqual(None, job) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3792 |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3793 # check the job was successfull |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
3794 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3795 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3796 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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473
diff
changeset
|
3797 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
3798 |
|
535e651e70a2
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diff
changeset
|
3799 # check the job content |
|
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diff
changeset
|
3800 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
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diff
changeset
|
3801 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
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diff
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|
3802 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
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diff
changeset
|
3803 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549', jobContent['Query'][0]['0008,0018']) |
|
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diff
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|
3804 |
|
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changeset
|
3805 # Reset and test synchronous C-Move at series level |
|
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diff
changeset
|
3806 for p in DoGet(_REMOTE, '/patients'): |
|
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|
3807 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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|
3808 |
| 81 | 3809 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3810 'Resources' : [ | |
| 3811 { | |
| 3812 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3813 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', | |
| 3814 } | |
| 3815 ]}) | |
| 3816 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3817 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3818 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) | |
| 3819 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) | |
| 3820 | |
|
482
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changeset
|
3821 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
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diff
changeset
|
3822 # Reset and test asynchronous C-Move at series level with additional PatientID filter |
|
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diff
changeset
|
3823 for p in DoGet(_REMOTE, '/patients'): |
|
535e651e70a2
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3824 DoDelete(_REMOTE, '/patients/%s' % p) |
|
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diff
changeset
|
3825 |
|
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Alain Mazy <am@osimis.io>
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diff
changeset
|
3826 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
3827 (_REMOTE, '/modalities/orthanctest/move', { |
|
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diff
changeset
|
3828 'Level' : 'Series', |
|
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diff
changeset
|
3829 'Resources' : [ |
|
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diff
changeset
|
3830 { |
|
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changeset
|
3831 'PatientID' : '5Yp0E', |
|
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Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3832 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3833 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3834 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3835 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3836 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3837 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3838 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3839 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3840 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3841 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3842 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3843 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3844 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3845 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3846 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3847 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3848 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3849 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', jobContent['Query'][0]['0020,000d']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3850 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', jobContent['Query'][0]['0020,000e']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3851 self.assertEqual('5Yp0E', jobContent['Query'][0]['0010,0020']) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3852 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3853 # Move series Brainix/Epi/* |
| 81 | 3854 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series', |
| 3855 'Resources' : [ | |
| 3856 { | |
| 3857 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775', | |
| 3858 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550', | |
| 3859 } | |
| 3860 ]}) | |
| 3861 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) | |
| 3862 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) | |
| 3863 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 3864 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 3865 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3866 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3867 # Move study Knee asynchronously |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3868 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3869 (_REMOTE, '/modalities/orthanctest/move', { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3870 'Level' : 'Study', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3871 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3872 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3873 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881' |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3874 } |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3875 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3876 'Asynchronous': True |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3877 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3878 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3879 self.assertNotEqual(None, job) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3880 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3881 # check the job was successfull |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3882 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3883 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3884 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3885 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3886 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3887 # check the job content |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3888 jobContent = DoGet(_REMOTE, '/jobs/%s' % job)['Content'] |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3889 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', jobContent['Query'][0]['0020,000d']) |
| 81 | 3890 |
| 3891 # Reset | |
| 3892 for p in DoGet(_REMOTE, '/patients'): | |
| 3893 DoDelete(_REMOTE, '/patients/%s' % p) | |
| 3894 | |
| 3895 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) | |
| 3896 | |
| 3897 | |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3898 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3899 # Move all at once asynchronously at PatientLevel |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3900 job = MonitorJob2(_REMOTE, lambda: DoPost(_REMOTE, '/modalities/orthanctest/move', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3901 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3902 'Level' : 'Patient', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3903 'Resources' : [ |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3904 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3905 'PatientID' : '5Yp0E', |
| 81 | 3906 }, |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3907 { |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3908 'PatientID': '887', |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3909 'PatientName' : 'KNEE', |
| 81 | 3910 } |
|
482
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3911 ], |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3912 'Synchronous': False |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3913 })) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3914 |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3915 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3916 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3917 self.assertEqual(3, len(DoGet(_REMOTE, '/series'))) |
|
535e651e70a2
added test for asynchronous cmove
Alain Mazy <am@osimis.io>
parents:
473
diff
changeset
|
3918 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
| 81 | 3919 |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3920 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3921 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3922 def test_reconstruct_json(self): |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3923 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3924 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3925 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3926 first = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3927 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3928 self.assertEqual('TWINOW', first['0008,1010']['Value']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3929 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3930 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3931 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3932 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3933 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3934 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3935 # Cannot delete the "DICOM" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3936 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3937 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3938 # Can delete the "DICOM as JSON" attachment |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3939 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3940 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance) |
|
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
3941 self.assertTrue(type(r) is dict and len(r) == 0) |
|
86
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3942 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3943 # Only the "DICOM" attachment subsists |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3944 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3945 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3946 # Cannot manually reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3947 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello')) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3948 |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3949 # Transparently reconstruct the "DICOM as JSON" attachment |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3950 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3951 second = DoGet(_REMOTE, '/instances/%s/tags' % instance) |
|
0401ef51f5c1
test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
83
diff
changeset
|
3952 self.assertEqual(str(first), str(second)) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3953 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3954 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3955 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3956 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3957 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3958 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3959 self.assertEqual(str(first), str(third)) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3960 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3961 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3962 def test_reconstruct_json2(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3963 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3964 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3965 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3966 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3967 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3968 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3969 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3970 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3971 aa = DoGet(_REMOTE, '/instances/%s/attachments' % a) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3972 bb = DoGet(_REMOTE, '/instances/%s/attachments' % b) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3973 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3974 if not IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3975 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3976 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3977 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3978 self.assertTrue('dicom-as-json' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3979 elif IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3980 self.assertEqual(2, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3981 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3982 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3983 self.assertTrue('dicom-until-pixel-data' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3984 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3985 self.assertEqual(1, len(aa)) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3986 self.assertEqual(aa, bb) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3987 self.assertTrue('dicom' in aa) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3988 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3989 # In Orthanc <= 1.9.0, this call deletes "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3990 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain') |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
3991 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3992 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3993 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3994 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3995 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3996 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3997 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3998 |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
3999 # In Orthanc <= 1.9.0, this call reconstructs "dicom-as-json" |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4000 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4001 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4002 |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4003 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1) and not IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4004 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4005 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4006 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4007 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a))) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
4008 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b))) |
|
87
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4009 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4010 |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4011 def test_private_tags(self): |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4012 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID'] |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4013 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4014 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4015 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename']) |
|
4b24faec842b
test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
86
diff
changeset
|
4016 |
|
92
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4017 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4018 def test_findscu_encoding(self): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4019 # Check out ../Database/Encodings/Generate.sh |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4020 TEST = u'Test-éüäöòДΘĝדصķћ๛ﾈİ' |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4021 ENCODINGS = { |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4022 'Arabic' : [ 'ISO_IR 127' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4023 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4024 'Cyrillic' : [ 'ISO_IR 144' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4025 'Greek' : [ 'ISO_IR 126' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4026 'Hebrew' : [ 'ISO_IR 138' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4027 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4028 'Latin1' : [ 'ISO_IR 100' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4029 'Latin2' : [ 'ISO_IR 101' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4030 'Latin3' : [ 'ISO_IR 109' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4031 'Latin4' : [ 'ISO_IR 110' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4032 'Latin5' : [ 'ISO_IR 148' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4033 'Thai' : [ 'ISO_IR 166', 'tis-620' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4034 'Utf8' : [ 'ISO_IR 192' ], |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4035 } |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4036 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4037 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4038 if len(ENCODINGS[name]) == 1: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4039 ENCODINGS[name].append(name.lower()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4040 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4041 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4042 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4043 for name in ENCODINGS.iterkeys(): |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4044 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4045 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4046 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4047 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4048 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4049 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4050 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4051 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4052 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4053 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4054 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4055 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4056 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4057 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4058 expected = TEST.encode(ENCODINGS[name][1], 'ignore') |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4059 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4060 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4061 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4062 #for master in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4063 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4064 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4065 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding')) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4066 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4067 for name in ENCODINGS: |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4068 DropOrthanc(_REMOTE) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4069 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4070 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4071 i = CallFindScu([ '-k', '0008,0052=STUDY', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4072 '-k', 'PatientID', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4073 '-k', 'SpecificCharacterSet', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4074 '-k', 'PatientName' ]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4075 i = i.decode(ENCODINGS[master][1]) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4076 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4077 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4078 self.assertEqual(1, len(characterSet)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4079 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4080 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4081 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4082 self.assertEqual(1, len(patientId)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4083 self.assertEqual(ENCODINGS[name][1], patientId[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4084 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4085 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4086 self.assertEqual(1, len(patientName)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4087 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4088 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4089 expected = TEST.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4090 tmp = ENCODINGS[master][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4091 expected = expected.encode(tmp, 'ignore').decode(tmp) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4092 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4093 self.assertEqual(expected, patientName[0].strip()) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4094 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4095 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4096 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True, |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4097 'Level' : 'Study', |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4098 'Query' : { }}) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4099 self.assertEqual(1, len(a)) |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4100 |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4101 tmp = ENCODINGS[name][1] |
|
dbcbffb889da
test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
89
diff
changeset
|
4102 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"]) |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4103 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4104 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4105 def test_reconstruct(self): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4106 def CompareMainDicomTag(expected, instance, level, tag): |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4107 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip()) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4108 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4109 originalInstanceId = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4110 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4111 studies = DoGet(_REMOTE, '/studies/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4112 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4113 self.assertEqual(1, len(studies)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4114 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4115 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4116 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4117 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4118 "Replace" : { |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4119 "StudyDescription" : "hello", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4120 "SeriesDescription" : "world", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4121 "SOPClassUID" : "test", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4122 "SOPInstanceUID" : "myid", |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4123 }, |
| 119 | 4124 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ], |
| 4125 "Force" : True | |
|
96
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4126 }) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4127 |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4128 instances = DoGet(_REMOTE, '/instances/') |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4129 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4130 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4131 self.assertEqual(1, len(DoGet(_REMOTE, '/series/'))) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4132 self.assertEqual(2, len(instances)) |
|
272d1229cb49
test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
95
diff
changeset
|
4133 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4134 modifiedInstanceId = instances[0] if instances[1] == originalInstanceId else instances[1] |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4135 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4136 # in 1.11.3, we have added an automatic reconstruction at the end of the modification |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4137 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4138 CompareMainDicomTag('Knee (R)', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4139 CompareMainDicomTag('AX. FSE PD', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4140 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4141 CompareMainDicomTag('myid', modifiedInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4142 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % originalInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4143 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % modifiedInstanceId).strip()) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4144 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4145 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4146 # metadata before reconstruct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4147 mba = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4148 mbb = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4149 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4150 # reconstruct by taking the new instance as the reference -> should repopulate study fields from this instance tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4151 DoPost(_REMOTE, '/instances/%s/reconstruct' % modifiedInstanceId, {}) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4152 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4153 CompareMainDicomTag('hello', originalInstanceId, 'study', 'StudyDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4154 CompareMainDicomTag('world', originalInstanceId, 'series', 'SeriesDescription') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4155 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', originalInstanceId, '', 'SOPInstanceUID') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4156 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4157 if not IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4158 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4159 # metadata after reconstruct should have been preserved |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4160 maa = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4161 mab = DoGet(_REMOTE, '/instances/%s/metadata?expand' % originalInstanceId) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4162 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4163 self.assertEqual(mba, maa) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
4164 self.assertEqual(mbb, mab) |
|
473
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
4165 |
|
4ee85b016a40
added NewTests framework - only the Housekeeper tests right now
Alain Mazy <am@osimis.io>
parents:
472
diff
changeset
|
4166 |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
4167 @unittest.skip("httpbin.org is down as of 2022-12-22") # TODO |
| 104 | 4168 def test_httpClient_lua(self): |
| 496 | 4169 retries = 4 |
|
463
29aaa3df718f
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4170 result = '' |
|
29aaa3df718f
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4171 |
| 104 | 4172 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f: |
| 496 | 4173 scriptContent = f.read() |
|
463
29aaa3df718f
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4174 # retry since this test sometimes fails if httpbin.org is unresponsive |
|
29aaa3df718f
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4175 while retries > 0 and not ('OK' in result): |
| 496 | 4176 print("Executing lua script HttpClient.lua") |
| 4177 result = DoPost(_REMOTE, '/tools/execute-script', scriptContent, 'application/lua') | |
|
463
29aaa3df718f
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Alain Mazy <am@osimis.io>
parents:
457
diff
changeset
|
4178 retries -= 1 |
| 102 | 4179 |
| 4180 self.assertIn('OK', result) | |
|
107
fddb35f7289d
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104
diff
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|
4181 |
|
fddb35f7289d
test_bitbucket_issue_44
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104
diff
changeset
|
4182 |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4183 def test_bitbucket_issue_44(self): |
|
589
47b87c87213b
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parents:
588
diff
changeset
|
4184 # https://bugs.orthanc-server.com/show_bug.cgi?id=44 |
|
107
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diff
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|
4185 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
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diff
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|
4186 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm') |
|
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diff
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|
4187 |
|
fddb35f7289d
test_bitbucket_issue_44
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104
diff
changeset
|
4188 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm |
|
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test_bitbucket_issue_44
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104
diff
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|
4189 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm') |
|
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diff
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|
4190 |
|
fddb35f7289d
test_bitbucket_issue_44
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104
diff
changeset
|
4191 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm |
|
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test_bitbucket_issue_44
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diff
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|
4192 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm') |
|
fddb35f7289d
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diff
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|
4193 |
|
fddb35f7289d
test_bitbucket_issue_44
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diff
changeset
|
4194 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7' |
|
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test_bitbucket_issue_44
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diff
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|
4195 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2' |
|
fddb35f7289d
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104
diff
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|
4196 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab' |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4197 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20' |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4198 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4199 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]: |
|
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test_bitbucket_issue_44
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104
diff
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|
4200 im = GetImage(_REMOTE, '/instances/%s/preview' % i) |
|
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diff
changeset
|
4201 self.assertEqual("L", im.mode) |
|
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104
diff
changeset
|
4202 self.assertEqual(2010, im.size[0]) |
|
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diff
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|
4203 self.assertEqual(2446, im.size[1]) |
|
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|
4204 |
|
fddb35f7289d
test_bitbucket_issue_44
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104
diff
changeset
|
4205 # This is the chest image, with MONOCHROME1. Raw background is |
|
fddb35f7289d
test_bitbucket_issue_44
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104
diff
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|
4206 # white (255), should be rendered as black (0) => invert |
|
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test_bitbucket_issue_44
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104
diff
changeset
|
4207 if i == monochrome1_jpeg: |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4208 # Add some tolerance because of JPEG destructive compression |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4209 self.assertGreater(10, im.getpixel((0,0))) |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
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|
4210 else: |
|
fddb35f7289d
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parents:
104
diff
changeset
|
4211 self.assertEqual(0, im.getpixel((0,0))) |
|
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parents:
104
diff
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|
4212 |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4213 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2) |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4214 self.assertEqual("L", im.mode) |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4215 self.assertEqual(1572, im.size[0]) |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4216 self.assertEqual(2010, im.size[1]) |
|
fddb35f7289d
test_bitbucket_issue_44
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parents:
104
diff
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|
4217 |
|
fddb35f7289d
test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
104
diff
changeset
|
4218 # This is the key image, with MONOCHROME2. Raw background is |
|
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test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4219 # white (255), should be rendered as white (255) |
|
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test_bitbucket_issue_44
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parents:
104
diff
changeset
|
4220 self.assertEqual(255, im.getpixel((0,0))) |
|
111
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4221 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4222 |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4223 def test_bitbucket_issue_42(self): |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4224 # https://bugs.orthanc-server.com/show_bug.cgi?id=42 |
| 123 | 4225 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2 |
|
111
7005cdeeb704
test_bitbucket_issue_42
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parents:
107
diff
changeset
|
4226 UploadInstance(_REMOTE, 'Issue42.dcm')['ID'] |
|
7005cdeeb704
test_bitbucket_issue_42
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parents:
107
diff
changeset
|
4227 modified = DoPost(_REMOTE, |
|
7005cdeeb704
test_bitbucket_issue_42
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parents:
107
diff
changeset
|
4228 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify', |
| 119 | 4229 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}', |
|
111
7005cdeeb704
test_bitbucket_issue_42
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parents:
107
diff
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|
4230 'application/json') |
|
7005cdeeb704
test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
107
diff
changeset
|
4231 self.assertTrue('PatientID' in modified) |
|
113
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4232 |
|
3e5934363e76
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4233 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4234 def test_rest_find_limit(self): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4235 # Check the "Since" and "Limit" parameters in URI "/tools/find" |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4236 # Related to issue 53: https://bugs.orthanc-server.com/show_bug.cgi?id=53 |
|
111
7005cdeeb704
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diff
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|
4237 |
|
113
3e5934363e76
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112
diff
changeset
|
4238 # Upload 6 instances |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4239 brainix = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4240 knee = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4241 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4242 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4243 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4244 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID']) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
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|
4245 |
|
3e5934363e76
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parents:
112
diff
changeset
|
4246 # Check using BRAINIX |
| 667 | 4247 # The tests below correspond to "isSimpleLookup_ == true" in "ResourceFinder" |
|
113
3e5934363e76
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diff
changeset
|
4248 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
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112
diff
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|
4249 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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112
diff
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|
4250 'Limit' : 10 }) |
|
3e5934363e76
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112
diff
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|
4251 self.assertEqual(4, len(a)) |
|
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diff
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|
4252 |
|
3e5934363e76
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parents:
112
diff
changeset
|
4253 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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diff
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|
4254 'Query' : { 'PatientName' : 'B*' }, |
|
3e5934363e76
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diff
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|
4255 'Limit' : 4 }) |
|
3e5934363e76
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diff
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|
4256 self.assertEqual(4, len(a)) |
|
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diff
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|
4257 |
|
3e5934363e76
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diff
changeset
|
4258 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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|
4259 'Query' : { 'PatientName' : 'B*' }, |
|
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diff
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|
4260 'Since' : 2, |
|
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diff
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|
4261 'Limit' : 4 }) |
|
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diff
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|
4262 self.assertEqual(2, len(a)) |
|
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diff
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|
4263 |
|
3e5934363e76
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diff
changeset
|
4264 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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|
4265 'Query' : { 'PatientName' : 'B*' }, |
|
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|
4266 'Limit' : 3 }) |
|
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diff
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|
4267 self.assertEqual(3, len(a)) |
|
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diff
changeset
|
4268 |
|
665
e024ba9e7768
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664
diff
changeset
|
4269 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
e024ba9e7768
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diff
changeset
|
4270 'Query' : { 'PatientName' : 'B*' }, |
|
e024ba9e7768
extended test_rest_find_limit
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diff
changeset
|
4271 'Limit' : 0 }) # This is an arbitrary convention |
|
e024ba9e7768
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Sebastien Jodogne <s.jodogne@gmail.com>
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664
diff
changeset
|
4272 self.assertEqual(4, len(a)) |
|
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diff
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|
4273 |
|
113
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|
4274 b = [] |
|
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diff
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|
4275 for i in range(4): |
|
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diff
changeset
|
4276 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
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|
4277 'Query' : { 'PatientName' : 'B*' }, |
|
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|
4278 'Limit' : 1, |
|
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changeset
|
4279 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4280 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4281 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4282 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4283 # Check whether the two sets are equal through symmetric difference |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4284 self.assertEqual(0, len(set(b) ^ set(brainix))) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4285 |
|
665
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4286 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4287 'Query' : { 'PatientName' : 'B*' }, |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4288 'Limit' : 1, |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4289 'Since' : 4 }) |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4290 self.assertEqual(0, len(a)) |
|
e024ba9e7768
extended test_rest_find_limit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
664
diff
changeset
|
4291 |
|
113
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4292 # Check using KNEE |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4293 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4294 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4295 'Limit' : 10 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4296 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4297 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4298 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4299 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4300 'Limit' : 2 }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4301 self.assertEqual(2, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4302 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4303 b = [] |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4304 for i in range(2): |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4305 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4306 'Query' : { 'PatientName' : 'K*' }, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4307 'Limit' : 1, |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4308 'Since' : i }) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4309 self.assertEqual(1, len(a)) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4310 b.append(a[0]) |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4311 |
|
3e5934363e76
test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
112
diff
changeset
|
4312 self.assertEqual(0, len(set(b) ^ set(knee))) |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4313 |
| 667 | 4314 # Now test "isSimpleLookup_ == false" |
| 4315 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4316 'Query' : { 'PatientPosition' : '*' }}) | |
| 4317 self.assertEqual(3, len(a)) | |
| 4318 | |
| 4319 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4320 'Query' : { 'PatientPosition' : '*' }, | |
| 4321 'Limit' : 0}) | |
| 4322 self.assertEqual(3, len(b)) | |
| 4323 self.assertEqual(a[0], b[0]) | |
| 4324 self.assertEqual(a[1], b[1]) | |
| 4325 self.assertEqual(a[2], b[2]) | |
| 4326 | |
| 4327 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4328 'Query' : { 'PatientPosition' : '*' }, | |
| 4329 'Limit' : 1}) | |
| 4330 self.assertEqual(1, len(b)) | |
| 4331 self.assertEqual(a[0], b[0]) | |
| 4332 | |
| 4333 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4334 'Query' : { 'PatientPosition' : '*' }, | |
| 4335 'Since' : 0, | |
| 4336 'Limit' : 1}) | |
| 4337 self.assertEqual(1, len(b)) | |
| 4338 self.assertEqual(a[0], b[0]) | |
| 4339 | |
| 4340 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4341 'Query' : { 'PatientPosition' : '*' }, | |
| 4342 'Since' : 0, | |
| 4343 'Limit' : 3}) | |
| 4344 self.assertEqual(3, len(b)) | |
| 4345 self.assertEqual(a[0], b[0]) | |
| 4346 self.assertEqual(a[1], b[1]) | |
| 4347 self.assertEqual(a[2], b[2]) | |
| 4348 | |
| 4349 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4350 'Query' : { 'PatientPosition' : '*' }, | |
| 4351 'Since' : 0, | |
| 4352 'Limit' : 4}) | |
| 4353 self.assertEqual(3, len(b)) | |
| 4354 self.assertEqual(a[0], b[0]) | |
| 4355 self.assertEqual(a[1], b[1]) | |
| 4356 self.assertEqual(a[2], b[2]) | |
| 4357 | |
| 4358 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4359 'Query' : { 'PatientPosition' : '*' }, | |
| 4360 'Since' : 1, | |
| 4361 'Limit' : 1}) | |
| 4362 self.assertEqual(1, len(b)) | |
| 4363 self.assertEqual(a[1], b[0]) | |
| 4364 | |
| 4365 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4366 'Query' : { 'PatientPosition' : '*' }, | |
| 4367 'Since' : 1, | |
| 4368 'Limit' : 2}) | |
| 4369 self.assertEqual(2, len(b)) | |
| 4370 self.assertEqual(a[1], b[0]) | |
| 4371 self.assertEqual(a[2], b[1]) | |
| 4372 | |
| 4373 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4374 'Query' : { 'PatientPosition' : '*' }, | |
| 4375 'Since' : 1, | |
| 4376 'Limit' : 3}) | |
| 4377 self.assertEqual(2, len(b)) | |
| 4378 self.assertEqual(a[1], b[0]) | |
| 4379 self.assertEqual(a[2], b[1]) | |
| 4380 | |
| 4381 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4382 'Query' : { 'PatientPosition' : '*' }, | |
| 4383 'Since' : 2, | |
| 4384 'Limit' : 1}) | |
| 4385 self.assertEqual(1, len(b)) | |
| 4386 self.assertEqual(a[2], b[0]) | |
| 4387 | |
| 4388 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4389 'Query' : { 'PatientPosition' : '*' }, | |
| 4390 'Since' : 2, | |
| 4391 'Limit' : 2}) | |
| 4392 self.assertEqual(1, len(b)) | |
| 4393 self.assertEqual(a[2], b[0]) | |
| 4394 | |
| 4395 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4396 'Query' : { 'PatientPosition' : '*' }, | |
| 4397 'Since' : 3, | |
| 4398 'Limit' : 1}) | |
| 4399 self.assertEqual(0, len(b)) | |
| 4400 | |
| 4401 b = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 4402 'Query' : { 'PatientPosition' : '*' }, | |
| 4403 'Since' : 3, | |
| 4404 'Limit' : 10}) | |
| 4405 self.assertEqual(0, len(b)) | |
| 4406 | |
|
115
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4407 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4408 def test_bitbucket_issue_46(self): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4409 # "PHI remaining after anonymization" |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4410 # https://bugs.orthanc-server.com/show_bug.cgi?id=46 |
|
115
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4411 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4412 def GetAnonymizedTags(study, version): |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4413 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4414 { 'DicomVersion' : version }, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4415 'application/json') ['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4416 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4417 self.assertEqual(1, len(a)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4418 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4419 instance = a[0]['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4420 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4421 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance)) |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4422 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4423 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm') |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4424 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff' |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4425 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4426 # Add the 0032,1033 (Requesting Service) and the 0010,1060 |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4427 # (Patient's Mother's Birth Name) tags |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4428 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy, |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4429 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}', |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4430 'application/json')['ID'] |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4431 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4432 # Use Table E.1-1 from PS 3.15-2008 |
|
45ebfab035b7
test_bitbucket_issue_46
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parents:
113
diff
changeset
|
4433 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4434 (instance, tags) = GetAnonymizedTags(newStudy, "2008") |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4435 self.assertTrue('0032,1033' in tags) |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4436 self.assertTrue('0010,1060' in tags) |
|
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parents:
113
diff
changeset
|
4437 |
|
45ebfab035b7
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parents:
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diff
changeset
|
4438 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1) |
|
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test_bitbucket_issue_46
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diff
changeset
|
4439 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf |
|
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parents:
113
diff
changeset
|
4440 (instance, tags) = GetAnonymizedTags(newStudy, "2017c") |
|
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parents:
113
diff
changeset
|
4441 self.assertFalse('0032,1033' in tags) |
|
45ebfab035b7
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parents:
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diff
changeset
|
4442 self.assertFalse('0010,1060' in tags) |
|
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parents:
113
diff
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|
4443 |
|
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diff
changeset
|
4444 t = {} |
|
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test_bitbucket_issue_46
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diff
changeset
|
4445 for (key, value) in tags.iteritems(): |
|
45ebfab035b7
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diff
changeset
|
4446 t[value['Name']] = value['Value'] |
|
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diff
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|
4447 |
|
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diff
changeset
|
4448 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared |
|
45ebfab035b7
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diff
changeset
|
4449 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared |
|
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changeset
|
4450 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared |
|
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diff
changeset
|
4451 self.assertFalse('SeriesDate' in t) # Type 3 tag => null |
|
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diff
changeset
|
4452 self.assertFalse('SeriesTime' in t) # Type 3 tag => null |
|
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changeset
|
4453 |
|
45ebfab035b7
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diff
changeset
|
4454 with tempfile.NamedTemporaryFile(delete = True) as f: |
|
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changeset
|
4455 # Run "dciodvfy" on the anonymized file to be sure it is still valid |
|
45ebfab035b7
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diff
changeset
|
4456 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance)) |
|
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diff
changeset
|
4457 f.flush() |
|
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parents:
113
diff
changeset
|
4458 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ], |
|
45ebfab035b7
test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
113
diff
changeset
|
4459 stderr = subprocess.STDOUT).split('\n') |
|
118
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4460 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4461 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4462 def test_bitbucket_issue_55(self): |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4463 def Run(modify, query): |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4464 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4465 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4466 operation = 'modify' if modify else 'anonymize' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4467 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4468 self.assertRaises(Exception, lambda: DoPost( |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4469 _REMOTE, '/studies/%s/%s' % (study, operation), query)) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4470 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4471 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4472 query["Force"] = True |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4473 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path'] |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4474 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4475 DoDelete(_REMOTE, a) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4476 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4477 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4478 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4479 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4480 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0' |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4481 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4482 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4483 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4484 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4485 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4486 Run(False, { "Keep" : [ "StudyInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4487 Run(False, { "Keep" : [ "SeriesInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4488 Run(False, { "Keep" : [ "SOPInstanceUID" ]}) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4489 |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4490 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4491 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4492 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } }) |
|
a954c535fef6
test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
117
diff
changeset
|
4493 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4494 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4495 def test_bitbucket_issue_56(self): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4496 # Case-insensitive matching over accents. This test assumes |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4497 # that the "CaseSensitivePN" configuration option of Orthanc |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4498 # is set to "false" (default value). |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4499 # https://bugs.orthanc-server.com/show_bug.cgi?id=56 |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4500 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4501 def Check(name, expected, expectedSensitive): |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4502 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4503 '-k', '0008,0052=PATIENT', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4504 '-k', 'PatientName=%s' % name ]) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4505 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4506 self.assertEqual(expected, len(patientNames)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4507 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4508 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4509 'CaseSensitive' : False, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4510 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4511 self.assertEqual(expected, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4512 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4513 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4514 'CaseSensitive' : True, |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4515 'Query' : { 'PatientName' : name }}) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4516 self.assertEqual(expectedSensitive, len(a)) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4517 |
| 533 | 4518 # SpecificCharacterSet = ISO_IR 100 (Latin1), PatientName=Test-éüäöò |
|
120
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4519 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm') |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4520 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4521 # WildcardConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4522 Check('TeSt*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4523 Check('TeSt-a*', 0, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4524 Check('TeSt-É*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4525 Check('TeSt-é*', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4526 Check('Test-é*', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4527 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4528 # ListConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4529 Check('Test-éüäöò\\nope', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4530 Check('Test-ÉÜÄÖÒ\\nope', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4531 |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4532 # ValueConstraint |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4533 Check('Test-éüäöò', 1, 1) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4534 Check('Test-ÉÜÄÖÒ', 1, 0) |
|
fce08afe6b2d
test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
119
diff
changeset
|
4535 |
| 125 | 4536 |
| 4537 def test_gbk_alias(self): | |
| 4538 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ | |
| 4539 # This test fails on Orthanc <= 1.3.0 | |
| 4540 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID'] | |
| 4541 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4542 self.assertEqual(tags['PatientName'], u'徐浩凯') | |
| 4543 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心') | |
| 126 | 4544 |
| 4545 | |
| 4546 def test_long_tag(self): | |
| 4547 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID'] | |
| 4548 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe' | |
| 4549 | |
| 4550 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) | |
| 4551 self.assertTrue('0018,1020' in tags) | |
| 4552 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4553 self.assertEqual('TooLong', tags['0018,1020']['Type']) | |
| 4554 self.assertEqual(None, tags['0018,1020']['Value']) | |
| 4555 | |
| 4556 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i) | |
| 4557 self.assertTrue('0018,1020' in tags) | |
| 4558 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name']) | |
| 4559 self.assertEqual('String', tags['0018,1020']['Type']) | |
| 4560 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4561 | |
| 4562 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 4563 self.assertTrue('SoftwareVersions' in tags) | |
| 4564 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4565 self.assertTrue('HeartRate' in tags) | |
| 4566 self.assertEqual(474, int(tags['HeartRate'])) | |
| 4567 | |
| 4568 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i) | |
| 4569 self.assertTrue('SoftwareVersions' in tags) | |
| 4570 self.assertEqual(None, tags['SoftwareVersions']) | |
| 4571 | |
| 4572 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i) | |
| 4573 self.assertTrue('SoftwareVersions' in tags) | |
| 4574 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4575 | |
| 4576 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i) | |
| 4577 self.assertTrue('SoftwareVersions' in tags) | |
| 4578 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet')) | |
| 4579 | |
| 4580 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series) | |
| 4581 self.assertEqual(1, len(tags)) | |
| 4582 self.assertTrue(i in tags.keys()) | |
| 4583 self.assertTrue('0018,1020' in tags[i]) | |
| 4584 self.assertEqual('TooLong', tags[i]['0018,1020']['Type']) | |
| 4585 | |
| 4586 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series) | |
| 4587 self.assertEqual(1, len(tags)) | |
| 4588 self.assertTrue(i in tags.keys()) | |
| 4589 self.assertTrue('0018,1020' in tags[i]) | |
| 4590 self.assertEqual('String', tags[i]['0018,1020']['Type']) | |
| 4591 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet')) | |
| 4592 | |
|
127
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4593 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4594 def test_extended_media(self): |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4595 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4596 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4597 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4598 self.assertEqual(2, len(z.namelist())) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4599 self.assertTrue('IMAGES/IM0' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4600 self.assertTrue('DICOMDIR' in z.namelist()) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4601 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4602 try: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4603 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4604 except: |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4605 # The file does not exist |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4606 pass |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4607 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4608 z.extract('DICOMDIR', '/tmp') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4609 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4610 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4611 self.assertEqual(5, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4612 self.assertTrue(a[0].startswith('Warning')) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4613 self.assertEqual('BasicDirectory', a[1]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4614 self.assertTrue('not present in standard DICOM IOD' in a[2]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4615 self.assertTrue('not present in standard DICOM IOD' in a[3]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4616 self.assertEqual('', a[4]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4617 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4618 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ], |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4619 stderr = subprocess.STDOUT).split('\n') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4620 self.assertEqual(1, len(a)) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4621 self.assertEqual('', a[0]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4622 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4623 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ]) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4624 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4625 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4626 # Check the presence of the series description (extended tag) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4627 self.assertTrue(re.search('T1W_aTSE', a) != None) |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4628 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4629 os.remove('/tmp/DICOMDIR') |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4630 |
|
1eea4d3a1ba9
test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
126
diff
changeset
|
4631 |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4632 def test_anonymize_relationships_1(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4633 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4634 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4635 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4636 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4637 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4638 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4639 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4640 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4641 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4642 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4643 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4644 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4645 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4646 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4647 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4648 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4649 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4650 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4651 SEQUENCE = '/instances/%s/content/ReferencedImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4652 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4653 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4654 FRAME = '/instances/%s/content/FrameOfReferenceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4655 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4656 self.assertEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4657 DoGet(_REMOTE, FRAME % a2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4658 self.assertEqual(DoGet(_REMOTE, FRAME % b1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4659 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4660 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4661 DoGet(_REMOTE, FRAME % b1)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4662 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4663 DoGet(_REMOTE, FRAME % b2)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4664 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4665 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4666 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4667 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4668 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4669 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4670 for i in range(3): |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4671 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4672 DoGet(_REMOTE, SOP % (a2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4673 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4674 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4675 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4676 DoGet(_REMOTE, SOP % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4677 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4678 DoGet(_REMOTE, SOP % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4679 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4680 DoGet(_REMOTE, CLASS % (b1, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4681 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4682 DoGet(_REMOTE, CLASS % (b2, i))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4683 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4684 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4685 def test_anonymize_relationships_2(self): |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4686 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4687 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
132
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4688 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4689 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4690 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4691 '{}', |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4692 'application/json')['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4693 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4694 a = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4695 self.assertEqual(2, len(a)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4696 a1 = a[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4697 a2 = a[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4698 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4699 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4700 self.assertEqual(2, len(b)) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4701 b1 = b[0]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4702 b2 = b[1]['ID'] |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4703 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4704 SEQUENCE = '/instances/%s/content/SourceImageSequence' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4705 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4706 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID' |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4707 |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4708 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4709 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4710 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4711 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4712 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4713 DoGet(_REMOTE, SOP % (a2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4714 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4715 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4716 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4717 DoGet(_REMOTE, SOP % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4718 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4719 DoGet(_REMOTE, SOP % (b2, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4720 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4721 DoGet(_REMOTE, CLASS % (b1, 0))) |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4722 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)), |
|
149144d854bb
Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
130
diff
changeset
|
4723 DoGet(_REMOTE, CLASS % (b2, 0))) |
|
133
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4724 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4725 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4726 def test_anonymize_relationships_3(self): |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4727 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4728 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4729 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4730 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4731 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4732 { "Keep" : [ "ContentSequence" ] }) ['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4733 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4734 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4735 self.assertEqual(2, len(a)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4736 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4737 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR': |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4738 sr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4739 mr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4740 else: |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4741 sr2 = a[1]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4742 mr2 = a[0]['ID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4743 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4744 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4745 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4746 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1), |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4747 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4748 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4749 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4750 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4751 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4752 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4753 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4754 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00') |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4755 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4756 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4757 PATH2 = PATH1 + '/0/ReferencedSeriesSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4758 PATH3 = PATH2 + '/0/ReferencedSOPSequence' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4759 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4760 PATH5 = PATH3 + '/0/ReferencedSOPClassUID' |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4761 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4762 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4763 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4764 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4765 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4766 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4767 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4768 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4769 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4770 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4771 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2))) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4772 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2)) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4773 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4774 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4775 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4776 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00')) |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4777 |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4778 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4779 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence'] |
|
f0d4c4707e64
test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
132
diff
changeset
|
4780 self.assertEqual(str(content1), str(content2)) |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4781 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4782 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4783 def test_bitbucket_issue_94(self): |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4784 # "a simple instance modification should not modify FrameOfReferenceUID + ..." |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
4785 # https://bugs.orthanc-server.com/show_bug.cgi?id=94 |
|
141
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4786 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID'] |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4787 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4788 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4789 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4790 modified = DoPost(_REMOTE, '/instances/%s/modify' % i, |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4791 { "Replace" : {"PatientID" : "toto"}, "Force": True}) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4792 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4793 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4794 |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4795 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ]) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4796 self.assertEqual(1, len(a)) |
|
5de178abe4d8
test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
138
diff
changeset
|
4797 |
|
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4798 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ]) |
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|
4799 self.assertEqual(1, len(b)) |
|
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4800 |
|
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|
4801 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ]) |
|
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|
4802 self.assertEqual(1, len(c)) |
|
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4803 |
|
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test_bitbucket_issue_94
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changeset
|
4804 self.assertEqual(a, b) # Modified DICOM |
|
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test_bitbucket_issue_94
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changeset
|
4805 self.assertNotEqual(a, c) # Anonymized DICOM |
|
143
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4806 |
|
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test_metadata_origin
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|
4807 |
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test_metadata_origin
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|
4808 def test_metadata_origin(self): |
|
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|
4809 # Upload using the REST API |
|
144
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changeset
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4810 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID'] |
|
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|
4811 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
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|
4812 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
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|
4813 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
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|
4814 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
| 315 | 4815 |
| 4816 # "HttpUsername" is empty iff "AuthenticationEnabled" is "false" | |
| 4817 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i) in [ '', 'alice' ]) | |
| 4818 | |
|
144
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changeset
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4819 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
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|
4820 self.assertEqual('RestApi', m['Origin']) |
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changeset
|
4821 self.assertEqual('', m['RemoteAET']) |
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changeset
|
4822 self.assertNotEqual('', m['RemoteIP']) |
|
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|
4823 self.assertFalse('CalledAET' in m) |
| 315 | 4824 self.assertTrue('HttpUsername' in m) |
| 4825 self.assertTrue(m['HttpUsername'] in [ '', 'alice' ]) | |
|
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4826 |
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changeset
|
4827 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
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|
4828 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
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changeset
|
4829 self.assertEqual('1', m['IndexInSeries']) |
|
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changeset
|
4830 self.assertTrue('ReceptionDate' in m) |
|
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changeset
|
4831 |
|
143
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changeset
|
4832 DoDelete(_REMOTE, '/instances/%s' % i) |
|
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changeset
|
4833 |
|
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changeset
|
4834 # Upload using the DICOM protocol |
|
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|
4835 subprocess.check_call([ FindExecutable('storescu'), |
|
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changeset
|
4836 _REMOTE['Server'], str(_REMOTE['DicomPort']), |
|
144
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changeset
|
4837 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'), |
|
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|
4838 '-xw' ]) # Propose JPEG2000 |
|
143
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changeset
|
4839 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i)) |
|
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changeset
|
4840 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i)) |
|
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changeset
|
4841 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i)) |
|
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changeset
|
4842 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i)) |
|
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test_metadata_origin
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changeset
|
4843 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i)) |
|
144
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changeset
|
4844 |
|
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diff
changeset
|
4845 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
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changeset
|
4846 self.assertEqual('DicomProtocol', m['Origin']) |
|
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changeset
|
4847 self.assertEqual('STORESCU', m['RemoteAET']) |
|
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changeset
|
4848 self.assertNotEqual('', m['RemoteIP']) |
|
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testing metadata?expand
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changeset
|
4849 self.assertEqual('ANY-SCP', m['CalledAET']) |
|
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testing metadata?expand
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changeset
|
4850 self.assertFalse('HttpUsername' in m) |
|
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testing metadata?expand
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diff
changeset
|
4851 |
|
7809fdf8056f
testing metadata?expand
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diff
changeset
|
4852 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax']) |
|
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testing metadata?expand
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diff
changeset
|
4853 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
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testing metadata?expand
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changeset
|
4854 self.assertEqual('1', m['IndexInSeries']) |
|
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diff
changeset
|
4855 self.assertTrue('ReceptionDate' in m) |
| 147 | 4856 |
| 4857 | |
| 4858 def test_lua_deadlock(self): | |
| 4859 # Rana Asim Wajid (2018-07-14): "It does seem that the issue | |
| 4860 # is with the lua script I'm using for conversion of images to | |
| 4861 # JPEG2000. When the script is used with 1.4.0 the first | |
| 4862 # instance appears to be stored and then everything just | |
| 4863 # halts, ie Orthanc wont respond to anything after that." | |
| 4864 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ | |
| 174 | 4865 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua') |
| 147 | 4866 |
| 4867 subprocess.check_call([ FindExecutable('storescu'), | |
| 4868 _REMOTE['Server'], str(_REMOTE['DicomPort']), | |
| 4869 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'), | |
| 4870 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'), | |
| 4871 ]) | |
| 4872 | |
| 4873 instances = DoGet(_REMOTE, '/instances') | |
| 4874 self.assertEqual(2, len(instances)) | |
| 4875 | |
| 4876 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0]) | |
| 4877 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1]) | |
| 175 | 4878 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed |
| 147 | 4879 self.assertEqual(t1, t2); |
|
154
4a533d003080
test_find_group_length
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147
diff
changeset
|
4880 |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4881 |
|
4a533d003080
test_find_group_length
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147
diff
changeset
|
4882 def test_find_group_length(self): |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4883 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain |
|
4a533d003080
test_find_group_length
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147
diff
changeset
|
4884 # one of the Generic Group Length tags (*, 0x0000) |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4885 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
|
4a533d003080
test_find_group_length
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parents:
147
diff
changeset
|
4886 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ]) |
|
4a533d003080
test_find_group_length
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diff
changeset
|
4887 self.assertFalse('UnableToProcess' in result) |
|
4a533d003080
test_find_group_length
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parents:
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diff
changeset
|
4888 self.assertFalse('E:' in result) |
|
179
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diff
changeset
|
4889 |
|
8a2dd77d4035
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177
diff
changeset
|
4890 |
|
8a2dd77d4035
testing split/merge
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diff
changeset
|
4891 def test_split(self): |
|
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diff
changeset
|
4892 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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diff
changeset
|
4893 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
|
254
05b77ade5e1d
test generation of sopinstanceuid in split/merge
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diff
changeset
|
4894 knee1Sop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
|
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test generation of sopinstanceuid in split/merge
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diff
changeset
|
4895 knee2Sop = '1.3.46.670589.11.17521.5.0.3124.2008081909113806560' |
|
179
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diff
changeset
|
4896 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
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diff
changeset
|
4897 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
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diff
changeset
|
4898 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
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testing split/merge
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diff
changeset
|
4899 |
|
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testing split/merge
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diff
changeset
|
4900 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
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diff
changeset
|
4901 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
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diff
changeset
|
4902 |
|
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diff
changeset
|
4903 info = DoGet(_REMOTE, '/studies/%s' % study) |
|
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diff
changeset
|
4904 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags']) |
|
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diff
changeset
|
4905 |
|
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diff
changeset
|
4906 job = MonitorJob2(_REMOTE, lambda: DoPost |
|
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diff
changeset
|
4907 (_REMOTE, '/studies/%s/split' % study, { |
|
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diff
changeset
|
4908 'Series' : [ t2 ], |
|
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diff
changeset
|
4909 'Replace' : { 'PatientName' : 'Hello' }, |
|
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diff
changeset
|
4910 'Remove' : [ 'ReferringPhysicianName' ], |
| 181 | 4911 'KeepSource' : False, |
| 4912 'Asynchronous' : True | |
|
179
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diff
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|
4913 })) |
|
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diff
changeset
|
4914 |
|
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diff
changeset
|
4915 self.assertNotEqual(None, job) |
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diff
changeset
|
4916 |
|
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diff
changeset
|
4917 studies = set(DoGet(_REMOTE, '/studies')) |
|
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diff
changeset
|
4918 self.assertEqual(2, len(studies)) |
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diff
changeset
|
4919 |
|
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diff
changeset
|
4920 series = set(DoGet(_REMOTE, '/series')) |
|
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diff
changeset
|
4921 self.assertEqual(2, len(series)) |
|
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changeset
|
4922 self.assertTrue(t1 in series) |
|
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diff
changeset
|
4923 |
|
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diff
changeset
|
4924 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy'] |
|
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changeset
|
4925 self.assertTrue(study in studies) |
|
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4926 self.assertTrue(study2 in studies) |
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4927 |
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|
4928 info = DoGet(_REMOTE, '/studies/%s' % study2) |
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4929 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName']) |
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|
4930 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags']) |
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4931 |
|
254
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|
4932 sopInstanceUids = set() |
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|
4933 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
4934 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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|
4935 |
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4936 self.assertTrue(knee1Sop in sopInstanceUids) |
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4937 |
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|
4938 # Fails if Orthanc <= 1.5.7 |
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4939 self.assertFalse(knee2Sop in sopInstanceUids) # Because "KeepSource" is False |
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4940 |
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4941 # One original instance is kept, another one is added because of the split |
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4942 self.assertEqual(2, len(sopInstanceUids)) |
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4943 |
|
179
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4944 |
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|
4945 def test_merge(self): |
|
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4946 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
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4947 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
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4948 kneeSop = '1.3.46.670589.11.17521.5.0.3124.2008081908590448738' |
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4949 brainixSop = '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
|
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4950 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
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4951 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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4952 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988' |
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4953 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0' |
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4954 |
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|
4955 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
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4956 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
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4957 |
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|
4958 job = MonitorJob2(_REMOTE, lambda: DoPost |
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4959 (_REMOTE, '/studies/%s/merge' % knee, { |
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|
4960 'Resources' : [ brainix ], |
| 181 | 4961 'KeepSource' : True, |
| 4962 'Synchronous' : False | |
|
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4963 })) |
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|
4964 |
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|
4965 self.assertNotEqual(None, job) |
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|
4966 |
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|
4967 studies = set(DoGet(_REMOTE, '/studies')) |
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|
4968 self.assertEqual(2, len(studies)) |
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|
4969 self.assertTrue(knee in studies) |
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|
4970 self.assertTrue(brainix in studies) |
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|
4971 |
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|
4972 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series']) |
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|
4973 self.assertTrue(t1 in series) |
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4974 series.remove(t1) |
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|
4975 self.assertEqual(1, len(series)) |
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|
4976 |
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|
4977 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances'] |
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|
4978 self.assertEqual(1, len(instances)) |
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|
4979 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4980 |
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|
4981 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances'] |
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|
4982 self.assertEqual(1, len(instances)) |
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4983 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4984 |
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|
4985 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances'] |
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|
4986 self.assertEqual(1, len(instances)) |
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|
4987 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) |
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|
4988 |
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|
4989 tags = DoGet(_REMOTE, '/studies/%s' % knee) |
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|
4990 |
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|
4991 for key in tags['PatientMainDicomTags']: |
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|
4992 self.assertEqual(a[key], merged[key]) |
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4993 if (key in b and key != 'PatientSex'): |
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4994 self.assertNotEqual(a[key], b[key]) |
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|
4995 |
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|
4996 for key in tags['MainDicomTags']: |
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|
4997 # Not in the patient/study module |
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4998 if (not key in [ 'InstitutionName', |
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|
4999 'RequestingPhysician', |
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|
5000 'RequestedProcedureDescription', ]): |
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|
5001 self.assertEqual(a[key], merged[key]) |
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|
5002 if (key in b): |
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5003 self.assertNotEqual(a[key], b[key]) |
|
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5004 |
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|
5005 sopInstanceUids = set() |
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|
5006 for i in DoGet(_REMOTE, '/instances?expand'): |
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|
5007 sopInstanceUids.add(i['MainDicomTags']['SOPInstanceUID']) |
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5008 |
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5009 self.assertTrue(kneeSop in sopInstanceUids) |
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|
5010 self.assertTrue(brainixSop in sopInstanceUids) |
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|
5011 |
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|
5012 # Fails if Orthanc <= 1.5.7 |
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|
5013 # The 2 original instances are kept, another one is added because of the merge |
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|
5014 self.assertEqual(3, len(sopInstanceUids)) |
|
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5015 |
| 187 | 5016 |
| 5017 def test_async_archive(self): | |
| 5018 # Testing the asynchronous generation of archives/medias (new | |
| 5019 # in Orthanc 1.4.3) | |
| 5020 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 5021 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') | |
| 5022 | |
| 5023 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' | |
| 5024 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' | |
| 5025 | |
| 5026 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 508 | 5027 (_REMOTE, '/series/%s/archive' % kneeT1, { |
| 187 | 5028 'Synchronous' : False |
| 5029 })) | |
| 5030 | |
| 5031 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5032 self.assertEqual(1, len(z.namelist())) | |
| 5033 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 5034 | |
|
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|
5035 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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|
5036 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
5037 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
5038 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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|
5039 |
| 187 | 5040 job2 = MonitorJob2(_REMOTE, lambda: DoPost |
| 508 | 5041 (_REMOTE, '/series/%s/media' % kneeT1, { |
| 187 | 5042 'Synchronous' : False |
| 5043 })) | |
| 5044 | |
| 5045 # The archive from the first job has been replaced by the | |
| 5046 # archive from second job (as MediaArchiveSize == 1) | |
| 5047 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
| 5048 | |
| 5049 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2) | |
| 5050 self.assertEqual(2, len(z.namelist())) | |
| 5051 self.assertTrue('DICOMDIR' in z.namelist()) | |
| 5052 | |
|
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|
5053 info = DoGet(_REMOTE, '/jobs/%s' % job2) |
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|
5054 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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|
5055 self.assertEqual(1, info['Content']['InstancesCount']) |
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|
5056 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5057 |
| 187 | 5058 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 5059 (_REMOTE, '/tools/create-archive', { | |
| 5060 'Synchronous' : False, | |
| 5061 'Resources' : [ kneeT1, kneeT2 ], | |
| 5062 })) | |
| 5063 | |
| 5064 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5065 self.assertEqual(2, len(z.namelist())) | |
| 5066 self.assertFalse('DICOMDIR' in z.namelist()) | |
| 5067 | |
|
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5068 info = DoGet(_REMOTE, '/jobs/%s' % job) |
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5069 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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5070 self.assertEqual(2, info['Content']['InstancesCount']) |
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5071 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5072 |
| 187 | 5073 job = MonitorJob2(_REMOTE, lambda: DoPost |
| 5074 (_REMOTE, '/tools/create-media', { | |
| 5075 'Synchronous' : False, | |
| 5076 'Resources' : [ kneeT1, kneeT2 ], | |
| 5077 })) | |
| 5078 | |
| 5079 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5080 self.assertEqual(3, len(z.namelist())) | |
| 5081 self.assertTrue('DICOMDIR' in z.namelist()) | |
|
188
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5082 |
|
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5083 self.assertEqual(0, info['Content']['ArchiveSizeMB']) # New in Orthanc 1.8.1 |
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5084 self.assertEqual(2, info['Content']['InstancesCount']) |
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5085 self.assertEqual(0, info['Content']['UncompressedSizeMB']) |
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5086 |
| 187 | 5087 |
|
540
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5088 def test_archive_job_delete_output(self): |
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5089 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
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5090 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
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|
5091 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') |
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5092 |
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5093 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
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|
5094 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
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5095 |
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|
5096 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
5097 (_REMOTE, '/series/%s/archive' % kneeT1, { |
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5098 'Synchronous' : False |
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5099 })) |
|
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|
5100 |
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5101 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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|
5102 # delete the output |
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|
5103 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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5104 # make sure it is not available anymore afterwards |
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5105 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
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|
5106 |
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|
5107 # repeat with another resource/job |
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|
5108 job = MonitorJob2(_REMOTE, lambda: DoPost |
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|
5109 (_REMOTE, '/series/%s/archive' % kneeT2, { |
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|
5110 'Synchronous' : False |
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|
5111 })) |
|
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|
5112 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) |
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|
5113 # delete the output |
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|
5114 DoDelete(_REMOTE, '/jobs/%s/archive' % job) |
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|
5115 # make sure it is not available anymore afterwards |
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|
5116 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) |
| 572 | 5117 # job is still available |
| 5118 DoGet(_REMOTE, '/jobs/%s' % job) | |
| 5119 | |
| 5120 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 5121 # delete the job itself | |
| 5122 DoDelete(_REMOTE, '/jobs/%s' % job) | |
| 5123 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/jobs/%s' % job)) | |
| 5124 | |
| 5125 # test deletion of jobs in history | |
| 5126 job = MonitorJob2(_REMOTE, lambda: DoPost | |
| 5127 (_REMOTE, '/series/%s/archive' % kneeT2, { | |
| 5128 'Synchronous' : False | |
| 5129 })) | |
| 5130 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job) | |
| 5131 # delete the job itself | |
| 5132 DoDelete(_REMOTE, '/jobs/%s' % job) | |
| 5133 # make sure it is not available anymore afterwards (and its output is not available either) | |
| 5134 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/jobs/%s' % job)) | |
| 5135 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job)) | |
|
540
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|
5136 |
|
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|
5137 |
|
188
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|
5138 def test_queries_hierarchy(self): |
|
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|
5139 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
189
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|
5140 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') |
|
188
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|
5141 |
|
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|
5142 tags = { |
|
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5143 'NumberOfPatientRelatedInstances' : '', |
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|
5144 'NumberOfPatientRelatedSeries' : '', |
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|
5145 'NumberOfPatientRelatedStudies' : '', |
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|
5146 'NumberOfStudyRelatedInstances' : '', |
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|
5147 'NumberOfStudyRelatedSeries' : '', |
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|
5148 'NumberOfSeriesRelatedInstances' : '', |
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|
5149 } |
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|
5150 |
|
189
11719f19bd62
test_dicom_disk_size
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diff
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|
5151 tags2 = copy.copy(tags) |
|
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|
5152 tags2['PatientID'] = '887' # Only consider the "Knee" patient |
|
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5153 |
|
188
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5154 patient = DoPost(_REMOTE, '/modalities/self/query', { |
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5155 'Level' : 'Patient', |
|
189
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|
5156 'Query' : tags2 |
|
188
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|
5157 }) ['ID'] |
|
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|
5158 |
|
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diff
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|
5159 study = DoPost(_REMOTE, '/modalities/self/query', { |
|
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|
5160 'Level' : 'Study', |
|
189
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|
5161 'Query' : tags2 |
|
188
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|
5162 }) ['ID'] |
|
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|
5163 |
|
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diff
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|
5164 series = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5165 'Level' : 'Series', |
|
189
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|
5166 'Query' : tags2 |
|
188
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|
5167 }) ['ID'] |
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|
5168 |
|
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|
5169 instance = DoPost(_REMOTE, '/modalities/self/query', { |
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|
5170 'Level' : 'Instance', |
|
189
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|
5171 'Query' : tags2 |
|
188
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|
5172 }) ['ID'] |
|
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5173 |
|
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|
5174 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient) |
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5175 self.assertEqual(1, len(p)) |
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5176 self.assertEqual('887', p[0]['PatientID']) |
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|
5177 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances']) |
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|
5178 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries']) |
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|
5179 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies']) |
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|
5180 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
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|
5181 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
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|
5182 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
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5183 |
|
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|
5184 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study) |
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|
5185 self.assertEqual(1, len(p)) |
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|
5186 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID']) |
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|
5187 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances']) |
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5188 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries']) |
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|
5189 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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|
5190 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
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|
5191 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
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|
5192 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0]) |
|
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diff
changeset
|
5193 |
|
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new test: test_queries_hierarchy
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diff
changeset
|
5194 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5195 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5196 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5197 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances']) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5198 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
5199 self.assertFalse('NumberOfPatientRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
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diff
changeset
|
5200 self.assertFalse('NumberOfPatientRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5201 self.assertFalse('NumberOfStudyRelatedInstances' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5202 self.assertFalse('NumberOfStudyRelatedSeries' in p[0]) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
5203 |
|
7d585263808b
new test: test_queries_hierarchy
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187
diff
changeset
|
5204 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance) |
|
7d585263808b
new test: test_queries_hierarchy
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diff
changeset
|
5205 self.assertEqual(1, len(p)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5206 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID']) |
|
7d585263808b
new test: test_queries_hierarchy
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parents:
187
diff
changeset
|
5207 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5208 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5209 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5210 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5211 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5212 |
|
188
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5213 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5214 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5215 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5216 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5217 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5218 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5219 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5220 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5221 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5222 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5223 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5224 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5225 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5226 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5227 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5228 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5229 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5230 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5231 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5232 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5233 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series, |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5234 { 'Query' : tags }) ['ID'] |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5235 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j), |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5236 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)) |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5237 |
|
7d585263808b
new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
187
diff
changeset
|
5238 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5239 def test_dicom_disk_size(self): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5240 dicomSize = 0 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5241 |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5242 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5243 isCompressed = (DoGet(_REMOTE, '/instances/%s/attachments/dicom/is-compressed' % a) != 0) |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5244 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5245 for i in range(2): |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5246 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5247 UploadInstance(_REMOTE, p) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5248 dicomSize += os.path.getsize(GetDatabasePath(p)) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5249 |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5250 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5251 self.assertEqual(2, s['CountInstances']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5252 self.assertEqual(2, s['CountSeries']) |
|
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5253 self.assertEqual(1, s['CountStudies']) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5254 |
|
189
11719f19bd62
test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
188
diff
changeset
|
5255 self.assertEqual(dicomSize, int(s['DicomUncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5256 |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5257 if isCompressed: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5258 self.assertGreater(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5259 self.assertGreater(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5260 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
379
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5261 else: |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5262 self.assertEqual(dicomSize, int(s['DicomDiskSize'])) |
|
097329b67509
fix tests if StorageCompression is true
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
378
diff
changeset
|
5263 self.assertEqual(s['UncompressedSize'], s['DiskSize']) |
|
380
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5264 if IsOrthancVersionAbove(_REMOTE, 1, 9, 1): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5265 if IsDicomUntilPixelDataStored(_REMOTE): |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5266 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5267 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5268 self.assertEqual(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5269 else: |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5270 # In Orthanc <= 1.9.0, there is the "dicom-as-json" |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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379
diff
changeset
|
5271 # attachment in addition to the DICOM file |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5272 self.assertLess(dicomSize, int(s['UncompressedSize'])) |
|
b9adc7d06347
update tests following removal of dicom-as-json attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
379
diff
changeset
|
5273 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5274 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5275 def test_changes_2(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5276 # More consistent behavior since Orthanc 1.5.2 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
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195
diff
changeset
|
5277 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5278 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5279 # Make sure that this is not the first change |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5280 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5281 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5282 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5283 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5284 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5285 # No more instance, but there were previous changes |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5286 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5287 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5288 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5289 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5290 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5291 seq = c['Last'] |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5292 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5293 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5294 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5295 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5296 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5297 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5298 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5299 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5300 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5301 self.assertEqual(seq, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5302 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5303 # Add one instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5304 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5305 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5306 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5307 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5308 self.assertEqual(4, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5309 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5310 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5311 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5312 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5313 self.assertEqual(1, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5314 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5315 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5316 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5317 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5318 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5319 self.assertTrue(c['Done']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5320 self.assertEqual(seq + 4, c['Last']) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5321 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5322 # Add, then delete, one user-defined metadata: This triggers 2 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5323 # changes of type "UpdatedMetadata" |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5324 i = DoGet(_REMOTE, '/instances') [0] |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5325 DoPut(_REMOTE, '/instances/%s/metadata/4000' % i, 'hello', 'text/plain') |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5326 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5327 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5328 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
5329 self.assertEqual('hello', body) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5330 |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5331 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5332 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5333 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5334 self.assertEqual(seq + 5, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5335 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5336 |
|
394
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5337 if IsOrthancVersionAbove(_REMOTE, 1, 9, 2): |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5338 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i, headers = { |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5339 'If-Match' : headers['etag'] |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5340 }) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5341 else: |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5342 self.assertFalse('etag' in headers) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5343 DoDelete(_REMOTE, '/instances/%s/metadata/4000' % i) |
|
e87d54a8a204
compatibility with 1.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
393
diff
changeset
|
5344 |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5345 c = DoGet(_REMOTE, '/changes?last') |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5346 self.assertEqual(1, len(c['Changes'])) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5347 self.assertTrue(c['Done']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5348 self.assertEqual(seq + 6, c['Last']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5349 self.assertEqual('UpdatedMetadata', c['Changes'][0]['ChangeType']) |
|
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5350 |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5351 # Remove the uploaded instance |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5352 DoDelete(_REMOTE, '/instances/%s' % a) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5353 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5354 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5355 c = DoGet(_REMOTE, '/changes') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5356 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5357 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5358 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5359 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5360 c = DoGet(_REMOTE, '/changes?last') |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5361 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5362 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5363 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5364 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5365 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000)) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5366 self.assertEqual(0, len(c['Changes'])) |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5367 self.assertTrue(c['Done']) |
|
389
27e0a2fcdc85
test /changes of type UpdatedMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
384
diff
changeset
|
5368 self.assertEqual(seq + 6, c['Last']) |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5369 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5370 |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5371 def test_bitbucket_issue_124(self): |
|
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5372 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID'] |
| 508 | 5373 s = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] |
| 5374 | |
| 5375 z = GetArchive(_REMOTE, '/series/%s/media' % s) | |
|
202
f26f9ae9c599
test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
195
diff
changeset
|
5376 self.assertEqual(2, len(z.namelist())) |
|
207
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5377 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5378 |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5379 def test_invalid_findscp(self): |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5380 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5381 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ]) |
|
a515eec74078
test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
202
diff
changeset
|
5382 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu))) |
|
208
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5383 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5384 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5385 def test_bitbucket_issue_90(self): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5386 def CountDicomResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5387 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ]) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5388 return len(re.findall('\(0010,0040\)', a)) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5389 |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5390 def CountRestResults(sex): |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5391 a = DoPost(_REMOTE, '/tools/find', |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5392 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } }) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5393 return len(a) |
|
2444c9a7c422
test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
207
diff
changeset
|
5394 |
|
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diff
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|
5395 # Just like the "CR000000.dcm" of the issue, the test image |
|
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diff
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|
5396 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset |
|
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diff
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|
5397 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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|
5398 |
|
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diff
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|
5399 # Test that the behavior of DICOM vs. REST API is consistent on missing tags |
|
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|
5400 |
|
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diff
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|
5401 # In wildcard constraints, the patient sex must be set for a match to occur |
|
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diff
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|
5402 self.assertEqual(0, CountDicomResults('PatientSex=*')) |
|
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|
5403 self.assertEqual(0, CountRestResults('*')) |
|
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|
5404 |
|
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diff
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|
5405 # In single-valued constraints, the patient sex must be set |
|
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|
5406 self.assertEqual(0, CountDicomResults('PatientSex=F')) |
|
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|
5407 self.assertEqual(0, CountDicomResults('PatientSex=M')) |
|
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|
5408 self.assertEqual(0, CountRestResults('F')) |
|
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|
5409 self.assertEqual(0, CountRestResults('M')) |
|
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diff
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|
5410 |
|
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diff
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|
5411 # Empty constraints are only used to ask the actual value of |
|
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diff
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|
5412 # the tag to be added to the *answer*. The tag should not used |
|
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diff
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|
5413 # as a filter in such a situation. |
|
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diff
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|
5414 self.assertEqual(1, CountDicomResults('PatientSex')) |
|
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diff
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|
5415 self.assertEqual(1, CountDicomResults('PatientSex=')) |
|
2444c9a7c422
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diff
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|
5416 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90) |
|
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|
5417 |
|
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|
5418 |
|
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test_rest_modalities_in_study
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diff
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|
5419 def test_rest_modalities_in_study(self): |
|
2c50c8f340c2
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|
5420 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3 |
|
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|
5421 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ |
|
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|
5422 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
5423 |
|
2c50c8f340c2
test_rest_modalities_in_study
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diff
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|
5424 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
2c50c8f340c2
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diff
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|
5425 'Query' : { 'ModalitiesInStudy' : 'US' }}) |
|
2c50c8f340c2
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diff
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|
5426 self.assertEqual(0, len(a)) |
|
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|
5427 |
|
2c50c8f340c2
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parents:
208
diff
changeset
|
5428 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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diff
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|
5429 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }}) |
|
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|
5430 self.assertEqual(1, len(a)) |
|
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|
5431 |
|
2c50c8f340c2
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diff
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|
5432 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
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diff
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|
5433 'Query' : { 'ModalitiesInStudy' : 'CT' }}) |
|
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|
5434 self.assertEqual(1, len(a)) |
| 211 | 5435 |
| 5436 | |
| 5437 def test_series_status(self): | |
| 5438 def HasCompletedInChanges(): | |
| 5439 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']: | |
| 5440 if c['ChangeType'] == 'CompletedSeries': | |
| 5441 return True; | |
| 5442 | |
| 5443 return False | |
| 5444 | |
| 5445 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm') | |
| 5446 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa' | |
| 5447 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5448 self.assertFalse(HasCompletedInChanges()) | |
| 5449 | |
| 5450 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614' | |
| 5451 | |
| 5452 for i in range(3): | |
| 5453 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1)) | |
| 5454 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5455 self.assertFalse(HasCompletedInChanges()) | |
| 5456 | |
| 5457 UploadInstance(_REMOTE, 'Series/Lena-4.dcm') | |
| 5458 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5459 self.assertTrue(HasCompletedInChanges()) | |
| 5460 | |
| 5461 DoDelete(_REMOTE, '/changes') | |
| 5462 self.assertFalse(HasCompletedInChanges()) | |
| 5463 | |
| 5464 UploadInstance(_REMOTE, 'Series/Lena-5.dcm') | |
| 5465 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status']) | |
| 5466 self.assertFalse(HasCompletedInChanges()) | |
| 5467 | |
| 215 | 5468 |
| 5469 def test_dicomweb(self): | |
| 5470 def Compare(dicom, reference): | |
| 5471 a = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5472 b = DoGet(_REMOTE, '/instances/%s/file' % a, | |
| 5473 headers = { 'Accept' : 'application/dicom+json' }) | |
| 5474 with open(GetDatabasePath(reference), 'rb') as c: | |
| 5475 d = json.load(c) | |
| 220 | 5476 AssertAlmostEqualRecursive(self, d, b) |
| 215 | 5477 |
| 5478 Compare('DummyCT.dcm', 'DummyCT.json') | |
| 5479 Compare('MarekLatin2.dcm', 'MarekLatin2.json') | |
| 5480 Compare('HierarchicalAnonymization/StructuredReports/IM0', | |
| 5481 'HierarchicalAnonymization/StructuredReports/IM0.json') | |
| 217 | 5482 |
| 5483 | |
| 5484 def test_issue_95_encodings(self): | |
|
589
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Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5485 # https://bugs.orthanc-server.com/show_bug.cgi?id=95 |
| 217 | 5486 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png" |
| 5487 | |
| 5488 # Very useful tool: "file2" from package "file-kanji" | |
| 5489 | |
| 5490 def GetPatientName(dicom): | |
| 5491 i = UploadInstance(_REMOTE, dicom) ['ID'] | |
| 5492 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) | |
| 5493 return j['PatientName'] | |
| 5494 | |
| 5495 def ComparePatientName(name, dicom): | |
| 5496 self.assertEqual(name, GetPatientName(dicom)) | |
| 5497 | |
| 5498 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5499 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN') | |
| 5500 | |
| 5501 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo | |
| 5502 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5 | |
| 5503 | |
| 5504 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo | |
| 5505 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2') | |
| 5506 | |
| 5507 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo | |
| 5508 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1') | |
| 5509 | |
| 5510 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo | |
| 5511 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31') | |
| 5512 | |
| 5513 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo | |
| 5514 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM') | |
| 5515 | |
| 5516 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo | |
| 5517 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK') | |
| 5518 | |
| 5519 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo | |
| 5520 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS') | |
| 5521 | |
| 5522 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo | |
| 5523 # NB: Hebrew is a right-to-left encoding, copying/pasting from | |
| 5524 # Linux console into Emacs automatically reverse the string | |
| 5525 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW') | |
| 5526 | |
| 5527 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo | |
| 5528 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such | |
| 5529 # characters by default, but copy/paste works with Emacs | |
| 5530 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB') | |
| 5531 | |
| 5532 # SCSH32: This SpecificCharacterSet is composed of 2 | |
| 5533 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the | |
| 5534 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the | |
| 5535 # remainer. Orthanc only takes into consideration the first | |
| 5536 # codepage: This is a limitation. | |
| 5537 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8 | |
| 5538 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ﾔﾏﾀﾞ^ﾀﾛｳ=')) | |
|
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diff
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|
5539 |
|
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diff
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|
5540 |
|
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test_findscu_missing_tags
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217
diff
changeset
|
5541 def test_findscu_missing_tags(self): |
|
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217
diff
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|
5542 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin |
|
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diff
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|
5543 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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diff
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|
5544 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm') |
|
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diff
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|
5545 |
| 669 | 5546 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'PatientName', '-k', 'Rows', '-k', 'Columns' ]) |
|
218
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|
5547 |
|
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diff
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|
5548 # We have 2 instances... |
|
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diff
changeset
|
5549 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
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diff
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|
5550 self.assertEqual(2, len(patientNames)) |
|
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diff
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|
5551 self.assertEqual('KNIX', patientNames[0]) |
|
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diff
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|
5552 self.assertEqual('KNIX', patientNames[1]) |
| 669 | 5553 |
| 5554 columns = re.findall('\(0028,0011\) US ([0-9]+)', i) | |
| 5555 self.assertEqual(2, len(columns)) | |
| 5556 self.assertEqual('512', columns[0]) | |
| 5557 self.assertEqual('512', columns[1]) | |
|
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|
5558 |
|
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diff
changeset
|
5559 # ...but only 1 value for the "Rows" tag |
|
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diff
changeset
|
5560 rows = re.findall('\(0028,0010\) US ([0-9]+)', i) |
|
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diff
changeset
|
5561 self.assertEqual(1, len(rows)) |
|
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diff
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|
5562 self.assertEqual('512', rows[0]) |
|
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|
5563 |
|
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|
5564 |
|
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diff
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|
5565 |
|
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diff
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|
5566 def test_bitbucket_issue_131(self): |
|
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|
5567 # "Orthanc PACS silently fails to C-MOVE due to duplicate |
|
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|
5568 # StudyInstanceUID in it's database." |
|
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changeset
|
5569 # https://bugs.orthanc-server.com/show_bug.cgi?id=131 |
|
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|
5570 |
|
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diff
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|
5571 # Insert 2 instances, with the same StudyInstanceUID, but with |
|
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|
5572 # different patient IDs. Orthanc will create 2 distincts |
|
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|
5573 # patients, and the hierarchy of resources above the two |
|
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changeset
|
5574 # instances will be fully disjoint. |
|
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diff
changeset
|
5575 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm') |
|
00e5aeea33dd
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parents:
218
diff
changeset
|
5576 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm') |
|
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test_bitbucket_issue_131
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diff
changeset
|
5577 |
|
00e5aeea33dd
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diff
changeset
|
5578 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
5579 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
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218
diff
changeset
|
5580 |
|
00e5aeea33dd
test_bitbucket_issue_131
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diff
changeset
|
5581 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
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218
diff
changeset
|
5582 'Level' : 'Study', |
|
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test_bitbucket_issue_131
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diff
changeset
|
5583 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5584 |
|
00e5aeea33dd
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diff
changeset
|
5585 # 1 study is matched |
|
00e5aeea33dd
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218
diff
changeset
|
5586 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5587 |
|
00e5aeea33dd
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218
diff
changeset
|
5588 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5589 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5590 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5591 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5592 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5593 # The two studies are matched, as we made the request at the |
|
00e5aeea33dd
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218
diff
changeset
|
5594 # Study level, thus the shared StudyInstanceUID is used as the key |
|
00e5aeea33dd
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diff
changeset
|
5595 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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test_bitbucket_issue_131
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218
diff
changeset
|
5596 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5597 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5598 # Match the 2 studies |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5599 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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218
diff
changeset
|
5600 'Level' : 'Study', |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5601 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID'] |
|
00e5aeea33dd
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218
diff
changeset
|
5602 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5603 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5604 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5605 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5606 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5607 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
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diff
changeset
|
5608 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5609 |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5610 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5611 # Same test, at the patient level => only 1 instance is transfered |
|
00e5aeea33dd
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parents:
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diff
changeset
|
5612 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
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218
diff
changeset
|
5613 'Level' : 'Patient', |
|
00e5aeea33dd
test_bitbucket_issue_131
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218
diff
changeset
|
5614 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5615 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5616 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5617 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5618 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5619 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5620 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
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test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5621 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5622 |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5623 |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5624 # Same test, at the series level => only 1 instance is transfered |
|
00e5aeea33dd
test_bitbucket_issue_131
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parents:
218
diff
changeset
|
5625 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5626 'Level' : 'Series', |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5627 'Query' : {"PatientID": "A" }})['ID'] |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5628 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5629 DropOrthanc(_LOCAL) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5630 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
| 220 | 5631 WaitAllNewJobsDone(_REMOTE, lambda: DoPost |
| 5632 (_REMOTE, '/queries/%s/retrieve' % a, | |
| 5633 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')) | |
|
219
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5634 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
00e5aeea33dd
test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
218
diff
changeset
|
5635 |
|
233
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5636 |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5637 def test_bitbucket_issue_136(self): |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5638 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5639 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0010,0010', '-k', '0028,0010', '-k', '0040,0275' ]) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5640 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5641 self.assertEqual(1, len(patientNames)) |
|
ce0b19a2c807
test_bitbucket_issue_136
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
231
diff
changeset
|
5642 self.assertEqual('John Doe', patientNames[0]) |
|
234
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5643 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5644 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5645 def test_anonymize_relationships_4(self): |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5646 # https://groups.google.com/d/msg/orthanc-users/UkcsqyTpszE/bXUpzU0vAAAJ |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5647 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/CR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5648 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/2019-03-28/PR000000.dcm')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5649 study = '0c923249-d52121a9-2b7167f7-6b85534f-0943697e' |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5650 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5651 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study, '{}', |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5652 'application/json')['ID'] |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5653 series = DoGet(_REMOTE, '/studies/%s/series' % anonymized) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5654 self.assertEqual(2, len(series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5655 |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5656 cr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5657 pr = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'PR', series)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5658 self.assertEqual(1, len(cr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5659 self.assertEqual(1, len(pr)) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5660 self.assertEqual(1, len(cr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5661 self.assertEqual(1, len(pr[0]['Instances'])) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5662 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5663 crinstance = DoGet(_REMOTE, '/instances/%s' % cr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5664 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % pr[0]['Instances'][0]) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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233
diff
changeset
|
5665 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5666 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1155'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
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233
diff
changeset
|
5667 crinstance['MainDicomTags']['SOPInstanceUID']) |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5668 self.assertEqual(tags['0008,1115'][0]['0008,1140'][0]['0008,1150'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
233
diff
changeset
|
5669 '1.2.840.10008.5.1.4.1.1.1') # SOP class for CR Image Storage |
|
93cd4fdd4a67
test_anonymize_relationships_4
Sebastien Jodogne <s.jodogne@gmail.com>
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233
diff
changeset
|
5670 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5671 # This fails on Orthanc <= 1.5.6 |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5672 self.assertEqual(tags['0008,1115'][0]['0020,000e'], |
|
93cd4fdd4a67
test_anonymize_relationships_4
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parents:
233
diff
changeset
|
5673 cr[0]['MainDicomTags']['SeriesInstanceUID']) |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5674 |
|
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5675 |
|
255
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5676 def test_anonymize_relationships_5(self): |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5677 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5678 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5679 oStudyId = ct1['ParentStudy'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5680 oCtInstanceId = ct1['ID'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5681 oRtInstanceId = rt1['ID'] |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5682 |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5683 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) |
|
02c3d91b155c
added anonymization test for RTH data (currently failing)
amazy
parents:
254
diff
changeset
|
5684 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) |
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5685 |
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5686 # first validate the relationships in the source data |
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5687 oStudyUID = oCtTags['StudyInstanceUID'] |
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5688 oRtSeriesUID = oRtTags['SeriesInstanceUID'] |
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5689 oRtInstanceUID = oRtTags['SOPInstanceUID'] |
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5690 oRtFrameOfReferenceUID = oRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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5691 oCtSeriesUID = oCtTags['SeriesInstanceUID'] |
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5692 oCtInstanceUID = oCtTags['SOPInstanceUID'] |
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5693 oCtFrameOfReferenceUID = oCtTags['FrameOfReferenceUID'] |
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|
5694 |
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|
5695 oContourSequenceCount = len(oRtTags['ROIContourSequence'][0]['ContourSequence']) |
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|
5696 self.assertEqual(oCtFrameOfReferenceUID, oRtFrameOfReferenceUID) |
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|
5697 self.assertEqual(oStudyUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
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|
5698 self.assertEqual(oCtSeriesUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) |
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|
5699 self.assertEqual(oCtInstanceUID, oRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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|
5700 self.assertEqual(oCtInstanceUID, oRtTags['ROIContourSequence'][0]['ContourSequence'][oContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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5701 |
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|
5702 ### anonymize |
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changeset
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5703 |
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|
5704 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{}', |
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|
5705 'application/json')['ID'] |
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changeset
|
5706 |
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|
5707 ### validate |
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changeset
|
5708 |
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changeset
|
5709 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) |
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|
5710 self.assertEqual(2, len(aSeries)) |
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5711 |
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|
5712 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) |
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|
5713 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) |
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|
5714 aCtInstanceId = aCt[0]['Instances'][0] |
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|
5715 aRtInstanceId = aRt[0]['Instances'][0] |
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|
5716 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) |
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|
5717 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) |
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5718 |
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changeset
|
5719 # now validate the relationships in the anonymized data |
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changeset
|
5720 aStudyUID = aCtTags['StudyInstanceUID'] |
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|
5721 aRtSeriesUID = aRtTags['SeriesInstanceUID'] |
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|
5722 aRtInstanceUID = aRtTags['SOPInstanceUID'] |
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|
5723 aRtFrameOfReferenceUID = aRtTags['ReferencedFrameOfReferenceSequence'][0]['FrameOfReferenceUID'] |
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changeset
|
5724 aCtSeriesUID = aCtTags['SeriesInstanceUID'] |
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|
5725 aCtInstanceUID = aCtTags['SOPInstanceUID'] |
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changeset
|
5726 aCtFrameOfReferenceUID = aCtTags['FrameOfReferenceUID'] |
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|
5727 |
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changeset
|
5728 aContourSequenceCount = len(aRtTags['ROIContourSequence'][0]['ContourSequence']) |
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|
5729 # make sure all UIDs have been updated |
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changeset
|
5730 self.assertNotEqual(oStudyUID, aStudyUID) |
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|
5731 self.assertNotEqual(oRtSeriesUID, aRtSeriesUID) |
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changeset
|
5732 self.assertNotEqual(oRtInstanceUID, aRtInstanceUID) |
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|
5733 self.assertNotEqual(oRtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
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|
5734 self.assertNotEqual(oCtSeriesUID, aCtSeriesUID) |
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|
5735 self.assertNotEqual(oCtInstanceUID, aCtInstanceUID) |
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changeset
|
5736 self.assertNotEqual(oCtFrameOfReferenceUID, aCtFrameOfReferenceUID) |
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|
5737 |
|
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changeset
|
5738 # validate the relationships |
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changeset
|
5739 self.assertEqual(oContourSequenceCount, aContourSequenceCount) |
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changeset
|
5740 self.assertEqual(aCtFrameOfReferenceUID, aRtFrameOfReferenceUID) |
| 256 | 5741 self.assertEqual(aStudyUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) |
| 5742 self.assertEqual(aCtSeriesUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['SeriesInstanceUID']) | |
|
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|
5743 self.assertEqual(aCtInstanceUID, aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['RTReferencedSeriesSequence'][0]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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changeset
|
5744 self.assertEqual(aCtInstanceUID, aRtTags['ROIContourSequence'][0]['ContourSequence'][aContourSequenceCount-1]['ContourImageSequence'][0]['ReferencedSOPInstanceUID']) |
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|
5745 |
| 256 | 5746 def test_anonymize_relationships_5b(self): |
| 5747 # same test as previous one but, this time, we force the StudyInstanceUID | |
| 5748 ct1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/CT01.dcm') | |
| 5749 rt1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/RTH/RT.dcm') | |
| 5750 oStudyId = ct1['ParentStudy'] | |
| 5751 oCtInstanceId = ct1['ID'] | |
| 5752 oRtInstanceId = rt1['ID'] | |
| 5753 | |
| 5754 oCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oCtInstanceId) | |
| 5755 oRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % oRtInstanceId) | |
| 5756 | |
| 5757 ### anonymize while forcing the StudyInstanceUID | |
| 5758 | |
| 5759 aStudyId = DoPost(_REMOTE, '/studies/%s/anonymize' % oStudyId, '{ "Replace" : { "StudyInstanceUID" : "1.2.3.4"}, "Force": true}', | |
| 5760 'application/json')['ID'] | |
| 5761 | |
| 5762 ### validate | |
| 5763 | |
| 5764 aSeries = DoGet(_REMOTE, '/studies/%s/series' % aStudyId) | |
| 5765 self.assertEqual(2, len(aSeries)) | |
| 5766 | |
| 5767 aCt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'CT', aSeries)) | |
| 5768 aRt = list(filter(lambda x: x['MainDicomTags']['Modality'] == 'RTSTRUCT', aSeries)) | |
| 5769 aCtInstanceId = aCt[0]['Instances'][0] | |
| 5770 aRtInstanceId = aRt[0]['Instances'][0] | |
| 5771 aCtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aCtInstanceId) | |
| 5772 aRtTags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % aRtInstanceId) | |
| 5773 | |
| 5774 self.assertEqual("1.2.3.4", aCtTags['StudyInstanceUID']) | |
| 5775 self.assertEqual("1.2.3.4", aRtTags['StudyInstanceUID']) | |
| 5776 self.assertEqual("1.2.3.4", aRtTags['ReferencedFrameOfReferenceSequence'][0]['RTReferencedStudySequence'][0]['ReferencedSOPInstanceUID']) | |
|
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|
5777 |
|
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|
5778 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
234
diff
changeset
|
5779 def test_bitbucket_issue_140(self): |
| 266 | 5780 # "Modifying private tags with REST API changes VR from LO to |
| 267 | 5781 # UN." This test fails if DCMTK <= 3.6.1 (e.g. fails on Ubuntu 16.04). |
|
589
47b87c87213b
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Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5782 # https://bugs.orthanc-server.com/show_bug.cgi?id=140 |
|
235
9929e4af2b7a
test_bitbucket_issue_140
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parents:
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diff
changeset
|
5783 source = UploadInstance(_REMOTE, 'Issue140.dcm') ['ID'] |
|
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changeset
|
5784 series = DoGet(_REMOTE, '/instances/%s' % source) ['ParentSeries'] |
|
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|
5785 |
|
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diff
changeset
|
5786 target = DoPost(_REMOTE, '/series/%s/modify' % series, { |
| 266 | 5787 'Replace' : { 'RadioButton3' : 'aaabbbccc' }, |
| 5788 'PrivateCreator' : 'RadioLogic', # <= the trick is here | |
|
235
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diff
changeset
|
5789 }, 'application/json') ['ID'] |
|
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|
5790 |
|
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diff
changeset
|
5791 instances = DoGet(_REMOTE, '/series/%s/instances' % target) |
|
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|
5792 self.assertEqual(1, len(instances)) |
|
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|
5793 |
|
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test_bitbucket_issue_140
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diff
changeset
|
5794 tags = DoGet(_REMOTE, '/instances/%s/tags' % source) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5795 t = tags['4321,1012'] |
|
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diff
changeset
|
5796 self.assertEqual('String', t['Type']) |
|
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changeset
|
5797 self.assertEqual('RadioButton3', t['Name']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5798 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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diff
changeset
|
5799 self.assertEqual('jklmopq', t['Value']) |
|
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diff
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|
5800 |
|
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test_bitbucket_issue_140
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diff
changeset
|
5801 tags = DoGet(_REMOTE, '/instances/%s/tags' % instances[0]['ID']) |
|
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diff
changeset
|
5802 t = tags['4321,1012'] |
| 327 | 5803 self.assertEqual('String', t['Type']) # This fails if DCMTK <= 3.6.1 |
|
235
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diff
changeset
|
5804 self.assertEqual('RadioButton3', t['Name']) |
|
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diff
changeset
|
5805 self.assertEqual('RadioLogic', t['PrivateCreator']) |
|
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test_bitbucket_issue_140
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diff
changeset
|
5806 self.assertEqual('aaabbbccc', t['Value']) |
|
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2de1aec255ae
test_find_normalize
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diff
changeset
|
5807 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5808 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5809 def test_find_normalize(self): |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5810 # https://groups.google.com/d/msg/orthanc-users/AIwooGjsh94/YL28MNY4AgAJ |
|
2de1aec255ae
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|
5811 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5812 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') |
|
2de1aec255ae
test_find_normalize
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|
5813 |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5814 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
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diff
changeset
|
5815 'Level' : 'Instance', |
|
2de1aec255ae
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diff
changeset
|
5816 'Query' : { 'Rows' : '42' } |
|
2de1aec255ae
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diff
changeset
|
5817 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
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diff
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|
5818 |
|
2de1aec255ae
test_find_normalize
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235
diff
changeset
|
5819 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
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diff
changeset
|
5820 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5821 self.assertFalse('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5822 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5823 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5824 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5825 'Query' : { 'Rows' : '42' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5826 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5827 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5828 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5829 b = DoGet(_REMOTE, '/queries/%s/answers' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5830 self.assertEqual(0, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5831 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5832 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5833 'Level' : 'Instance', |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5834 'Query' : { 'Rows' : '512' }, |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5835 'Normalize' : False |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5836 }) ['ID'] |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5837 |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5838 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5839 self.assertEqual(1, len(b)) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5840 self.assertTrue('Rows' in b[0]) |
|
2de1aec255ae
test_find_normalize
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
235
diff
changeset
|
5841 self.assertEqual('512', b[0]['Rows']) |
| 237 | 5842 |
| 5843 a = DoPost(_REMOTE, '/modalities/self/query', { | |
| 5844 'Level' : 'Instance', | |
| 5845 'Query' : { 'Rows' : '' }, | |
| 5846 'Normalize' : False | |
| 5847 }) ['ID'] | |
| 5848 | |
| 5849 b = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) | |
| 5850 self.assertEqual(1, len(b)) | |
| 5851 self.assertTrue('Rows' in b[0]) | |
| 5852 self.assertEqual('512', b[0]['Rows']) | |
| 5853 | |
| 5854 self.assertRaises(Exception, lambda: DoPost( | |
| 5855 _REMOTE, '/modalities/self/query', { | |
| 5856 'Level' : 'Instance', | |
| 5857 'Query' : { 'Rows' : '*' }, # Out-of-range value | |
| 5858 'Normalize' : False | |
| 5859 })) | |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5860 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5861 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5862 def test_bitbucket_issue_141(self): |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5863 # https://bugs.orthanc-server.com/show_bug.cgi?id=141 |
|
243
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5864 a = UploadInstance(_REMOTE, 'Issue141.dcm') ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5865 study = '494c8037-b237f263-d8f15075-c8cb2280-daf39bd1' |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5866 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5867 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f: |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5868 pdf = f.read() |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5869 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5870 b = DoPost(_REMOTE, '/tools/create-dicom', { |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5871 'Parent' : study, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5872 'Tags' : {}, |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5873 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5874 }) ['ID'] |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5875 |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5876 tagsA = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5877 tagsB = DoGet(_REMOTE, '/instances/%s/tags?short' % b) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5878 self.assertEqual(tagsA['0008,0005'], tagsB['0008,0005']) |
|
cccf697a4e13
test_bitbucket_issue_141
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
237
diff
changeset
|
5879 self.assertEqual(tagsA['0008,1030'], tagsB['0008,1030']) |
|
247
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5880 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5881 |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5882 def test_modifying_missing_patientid(self): |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5883 # https://groups.google.com/d/msg/orthanc-users/aphG_h1AHVg/rfOTtTPTAgAJ |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5884 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') |
|
1abdab0ba0e6
test_modifying_missing_patientid
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
243
diff
changeset
|
5885 DoPost(_REMOTE, '/studies/0c4aca1d-c107a241-6659d6aa-594c674a-a468b94a/modify', {}) |
| 262 | 5886 |
| 5887 | |
| 5888 def test_log_level(self): | |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
5889 # https://bugs.orthanc-server.com/show_bug.cgi?id=65 |
| 262 | 5890 original = DoGet(_REMOTE, '/tools/log-level') |
| 5891 | |
| 5892 DoPut(_REMOTE, '/tools/log-level', 'default') | |
| 5893 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level')) | |
| 5894 DoGet(_REMOTE, '/system') | |
| 5895 | |
| 5896 DoPut(_REMOTE, '/tools/log-level', 'verbose') | |
| 5897 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level')) | |
| 5898 DoGet(_REMOTE, '/system') | |
| 5899 | |
| 5900 DoPut(_REMOTE, '/tools/log-level', 'trace') | |
| 5901 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level')) | |
| 5902 DoGet(_REMOTE, '/system') | |
| 5903 | |
| 5904 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level', 'nope')) | |
| 5905 | |
| 5906 # Switch back to the original log level | |
| 5907 DoPut(_REMOTE, '/tools/log-level', original) | |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5908 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5909 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5910 def test_upload_compressed(self): |
| 265 | 5911 # New in Orthanc 1.6.0 |
|
264
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5912 with open(GetDatabasePath('DummyCT.dcm.gz'), 'rb') as f: |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5913 d = f.read() |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5914 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5915 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom')) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5916 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5917 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5918 headers = { 'Content-Encoding' : 'nope' })) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5919 |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5920 a = DoPost(_REMOTE, '/instances', d, 'application/dicom', |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5921 headers = { 'Content-Encoding' : 'gzip' }) |
|
445f498bc1d4
test_upload_compressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
263
diff
changeset
|
5922 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a['ID']) |
| 262 | 5923 |
| 5924 | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5925 def test_study_series_find_inconsistency(self): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5926 # https://groups.google.com/forum/#!topic/orthanc-users/bLv6Z11COy0 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5927 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5928 def CountAnswers(query): |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5929 a = DoPost(_REMOTE, 'modalities/self/query', query) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5930 return len(DoGet(_REMOTE, '%s/answers' % a['Path'])) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5931 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5932 # This instance has "SeriesDescription" (0008,103e) tag, but no |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5933 # "ProtocolName" (0018,1030). Both of those tags are part of |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5934 # the "main DICOM tags" of Orthanc. |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5935 UploadInstance(_REMOTE, 'Issue137.dcm') |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5936 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5937 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5938 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5939 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5940 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5941 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5942 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5943 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5944 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5945 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5946 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5947 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5948 ## "SeriesDescription" is present, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5949 ## http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.4.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5950 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5951 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5952 # At the study level, the "SeriesDescription" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5953 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5954 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5955 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5956 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5957 'SeriesDescription' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5958 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5959 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5960 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5961 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5962 # This test fails on Orthanc <= 1.5.8 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5963 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5964 'Query' : { |
| 669 | 5965 'ImageComments' : '*' # Wildcard matching => no match, as the tag is absent |
| 5966 }, | |
| 5967 'Normalize' : False | |
| 5968 })) | |
| 5969 self.assertEqual(1, CountAnswers({ | |
| 5970 'Level' : 'Study', | |
| 5971 'Query' : { | |
| 5972 'ImageComments' : '' | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5973 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5974 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5975 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5976 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5977 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5978 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5979 'SeriesDescription' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5980 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5981 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5982 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5983 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5984 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5985 'Query' : { |
| 669 | 5986 'ImageComments' : '*' # Matches, as wiped out by the normalization |
| 5987 }, | |
| 5988 'Normalize' : True | |
| 5989 })) | |
| 5990 self.assertEqual(1, CountAnswers({ | |
| 5991 'Level' : 'Study', | |
| 5992 'Query' : { | |
| 5993 'ImageComments' : '' | |
|
263
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5994 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5995 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5996 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5997 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5998 for normalize in [ True, False ]: |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
5999 # At the series level, the "SeriesDescription" tag is allowed, and |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6000 # normalization has no effect |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6001 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6002 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6003 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6004 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6005 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6006 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6007 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6008 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6009 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6010 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6011 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6012 # "Universal matching" will match all entities, including |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6013 # those with the missing tag |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6014 # http://dicom.nema.org/medical/dicom/2019e/output/chtml/part04/sect_C.2.2.2.3.html |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6015 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6016 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6017 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6018 'SeriesDescription' : '*' # Wildcard matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6019 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6020 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6021 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6022 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6023 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6024 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6025 'SeriesDescription' : '*model*' # The actual value is "STL model: intraop Report" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6026 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6027 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6028 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6029 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6030 'Level' : 'Series', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6031 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6032 'SeriesDescription' : '*MISMATCHED^VALUE*' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6033 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6034 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6035 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6036 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6037 # Universal matching matches any instance, even if the |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6038 # query is at the study-level, and thus if "SeriesDescription" |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6039 # makes no sense |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6040 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6041 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6042 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6043 'SeriesDescription' : '' # Universal matching |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6044 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6045 'Normalize' : normalize, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6046 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6047 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6048 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6049 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6050 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6051 ## "ProtocolName" is absent, and has VR "CS" => wildcard is allowed |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6052 ## |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6053 |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6054 # At the study level, the "ProtocolName" tag is not allowed, but |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6055 # is wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6056 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6057 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6058 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6059 'ProtocolName' : 'NOPE' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6060 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6061 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6062 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6063 self.assertEqual(0, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6064 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6065 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6066 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6067 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6068 'Normalize' : False |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6069 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6070 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6071 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6072 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6073 'ProtocolName' : 'THIS^VALUE^IS^WIPED^OUT' |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6074 }, |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6075 'Normalize' : True |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6076 })) |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6077 self.assertEqual(1, CountAnswers({ |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6078 'Level' : 'Study', |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6079 'Query' : { |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
changeset
|
6080 'ProtocolName' : '*' # Matches, as wiped out by the normalization |
|
a2719263fd04
test_study_series_find_inconsistency
Sebastien Jodogne <s.jodogne@gmail.com>
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6081 }, |
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6082 'Normalize' : True |
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6083 })) |
|
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6084 |
|
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6085 for normalize in [ True, False ]: |
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6086 # At the series level, the "ProtocolName" tag is allowed, and |
|
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6087 # normalization has no effect |
|
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6088 |
|
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|
6089 self.assertEqual(1, CountAnswers({ |
|
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|
6090 'Level' : 'Series', |
|
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|
6091 'Query' : { |
|
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|
6092 'ProtocolName' : '' # Universal matching |
|
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|
6093 }, |
|
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|
6094 'Normalize' : normalize, |
|
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|
6095 })) |
|
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|
6096 self.assertEqual(0, CountAnswers({ |
|
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|
6097 'Level' : 'Series', |
|
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|
6098 'Query' : { |
|
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|
6099 'ProtocolName' : '*' # Wildcard matching => no match, as the tag is absent |
|
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|
6100 }, |
|
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diff
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|
6101 'Normalize' : normalize, |
|
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|
6102 })) |
|
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|
6103 self.assertEqual(0, CountAnswers({ |
|
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|
6104 'Level' : 'Series', |
|
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|
6105 'Query' : { |
|
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|
6106 'ProtocolName' : '*MISMATCHED^VALUE*' |
|
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|
6107 }, |
|
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|
6108 'Normalize' : normalize, |
|
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|
6109 })) |
|
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|
6110 |
|
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|
6111 self.assertEqual(1, CountAnswers({ |
|
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|
6112 'Level' : 'Study', |
|
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|
6113 'Query' : { |
|
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|
6114 'ProtocolName' : '' # Universal matching |
|
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|
6115 }, |
|
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|
6116 'Normalize' : normalize, |
|
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|
6117 })) |
|
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|
6118 |
|
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|
6119 |
|
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|
6120 ## |
|
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|
6121 ## "StudyInstanceUID" is present, and has VR "UI" => wildcard is not allowed |
|
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|
6122 ## |
|
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|
6123 |
|
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|
6124 for level in [ 'Study', 'Series' ] : |
|
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|
6125 for normalize in [ True, False ]: |
|
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|
6126 self.assertEqual(1, CountAnswers({ |
|
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|
6127 'Level' : level, |
|
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|
6128 'Query' : { |
|
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|
6129 'StudyInstanceUID' : '' # Universal matching |
|
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|
6130 }, |
|
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|
6131 'Normalize' : normalize, |
|
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|
6132 })) |
|
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|
6133 self.assertEqual(0, CountAnswers({ |
|
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|
6134 'Level' : level, |
|
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|
6135 'Query' : { |
|
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|
6136 'StudyInstanceUID' : 'MISMATCHED^VALUE' |
|
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|
6137 }, |
|
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|
6138 'Normalize' : normalize, |
|
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|
6139 })) |
|
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|
6140 self.assertEqual(1, CountAnswers({ |
|
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|
6141 'Level' : level, |
|
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|
6142 'Query' : { |
|
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|
6143 'StudyInstanceUID' : '4.5.6' # This is the actual value |
|
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|
6144 }, |
|
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|
6145 'Normalize' : normalize, |
|
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|
6146 })) |
|
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|
6147 |
| 269 | 6148 # Wildcard matching is not allowed for this VR |
|
263
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diff
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|
6149 # This test fails on Orthanc <= 1.5.8 |
| 269 | 6150 self.assertRaises(Exception, lambda: CountAnswers({ |
|
263
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|
6151 'Level' : level, |
|
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|
6152 'Query' : { |
| 269 | 6153 'StudyInstanceUID' : '*' |
|
263
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|
6154 }, |
|
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|
6155 'Normalize' : normalize, |
|
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|
6156 })) |
| 265 | 6157 |
| 6158 | |
| 6159 def test_rendered(self): | |
| 6160 # New in Orthanc 1.6.0 | |
| 6161 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID'] | |
| 6162 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6163 self.assertEqual("RGB", im.mode) | |
| 6164 self.assertEqual(41, im.size[0]) | |
| 6165 self.assertEqual(41, im.size[1]) | |
| 6166 | |
| 6167 # http://effbot.org/zone/pil-comparing-images.htm | |
| 6168 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png')) | |
| 6169 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None) | |
| 6170 | |
| 6171 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10' % i) | |
| 6172 self.assertEqual("RGB", im.mode) | |
| 6173 self.assertEqual(10, im.size[0]) | |
| 6174 self.assertEqual(10, im.size[1]) | |
| 6175 | |
| 6176 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10' % i) | |
| 6177 self.assertEqual("RGB", im.mode) | |
| 6178 self.assertEqual(10, im.size[0]) | |
| 6179 self.assertEqual(10, im.size[1]) | |
| 6180 | |
| 6181 im = GetImage(_REMOTE, '/instances/%s/rendered?height=128' % i) | |
| 6182 self.assertEqual("RGB", im.mode) | |
| 6183 self.assertEqual(128, im.size[0]) | |
| 6184 self.assertEqual(128, im.size[1]) | |
| 6185 | |
| 6186 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=0' % i) | |
| 6187 self.assertEqual("RGB", im.mode) | |
| 6188 self.assertEqual(10, im.size[0]) | |
| 6189 self.assertEqual(10, im.size[1]) | |
| 6190 | |
| 6191 im = GetImage(_REMOTE, '/instances/%s/rendered?height=10&smooth=1' % i) | |
| 6192 self.assertEqual("RGB", im.mode) | |
| 6193 self.assertEqual(10, im.size[0]) | |
| 6194 self.assertEqual(10, im.size[1]) | |
| 6195 | |
| 6196 im = GetImage(_REMOTE, '/instances/%s/rendered?height=5&width=10' % i) | |
| 6197 self.assertEqual("RGB", im.mode) | |
| 6198 self.assertEqual(5, im.size[0]) | |
| 6199 self.assertEqual(5, im.size[1]) | |
| 6200 | |
| 6201 | |
| 6202 # Grayscale image | |
| 6203 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] | |
| 6204 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6205 self.assertEqual("L", im.mode) | |
| 6206 self.assertEqual(288, im.size[0]) | |
| 6207 self.assertEqual(288, im.size[1]) | |
| 6208 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6209 | |
| 6210 # Those are the original windowing parameters that are written | |
| 6211 # inside the DICOM file | |
| 6212 im2 = GetImage(_REMOTE, '/instances/%s/rendered?window-center=248.009544468547&window-width=431.351843817788' % i) | |
| 6213 self.assertEqual("L", im2.mode) | |
| 6214 self.assertEqual(288, im2.size[0]) | |
| 6215 self.assertEqual(288, im2.size[1]) | |
| 6216 self.assertTrue(ImageChops.difference(im, im2).getbbox() is None) | |
| 6217 | |
| 6218 im = GetImage(_REMOTE, '/instances/%s/rendered?width=512&smooth=0' % i) | |
| 6219 self.assertEqual("L", im.mode) | |
| 6220 self.assertEqual(512, im.size[0]) | |
| 6221 self.assertEqual(512, im.size[1]) | |
| 6222 | |
| 6223 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=0' % i) | |
| 6224 self.assertEqual("L", im.mode) | |
| 6225 self.assertEqual(10, im.size[0]) | |
| 6226 self.assertEqual(10, im.size[1]) | |
| 6227 | |
| 6228 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&smooth=1' % i) | |
| 6229 self.assertEqual("L", im.mode) | |
| 6230 self.assertEqual(10, im.size[0]) | |
| 6231 self.assertEqual(10, im.size[1]) | |
| 6232 | |
| 6233 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=-1000' % i) | |
| 6234 self.assertEqual("L", im.mode) | |
| 6235 self.assertEqual(1, im.size[0]) | |
| 6236 self.assertEqual(1, im.size[1]) | |
| 6237 self.assertEqual(255, im.getpixel((0, 0))) | |
| 6238 | |
| 6239 im = GetImage(_REMOTE, '/instances/%s/rendered?width=1&window-center=1000' % i) | |
| 6240 self.assertEqual("L", im.mode) | |
| 6241 self.assertEqual(1, im.size[0]) | |
| 6242 self.assertEqual(1, im.size[1]) | |
| 6243 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6244 | |
| 6245 | |
| 6246 # Test monochrome 1 | |
| 6247 i = UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')['ID'] | |
| 6248 im = GetImage(_REMOTE, '/instances/%s/rendered' % i) | |
| 6249 self.assertEqual("L", im.mode) | |
| 6250 self.assertEqual(2010, im.size[0]) | |
| 6251 self.assertEqual(2446, im.size[1]) | |
| 6252 self.assertEqual(0, im.getpixel((0, 0))) | |
| 6253 im = GetImage(_REMOTE, '/instances/%s/rendered?width=20' % i) | |
| 6254 self.assertEqual("L", im.mode) | |
| 6255 self.assertEqual(20, im.size[0]) | |
| 6256 self.assertEqual(24, im.size[1]) | |
| 6257 im = GetImage(_REMOTE, '/instances/%s/rendered?height=24' % i) | |
| 6258 self.assertEqual("L", im.mode) | |
| 6259 self.assertEqual(20, im.size[0]) | |
| 6260 self.assertEqual(24, im.size[1]) | |
| 6261 im = GetImage(_REMOTE, '/instances/%s/rendered?width=10&height=24' % i) | |
| 6262 self.assertEqual("L", im.mode) | |
| 6263 self.assertEqual(10, im.size[0]) | |
| 6264 self.assertEqual(12, im.size[1]) | |
| 6265 im = GetImage(_REMOTE, '/instances/%s/rendered?width=40&height=24' % i) | |
| 6266 self.assertEqual("L", im.mode) | |
| 6267 self.assertEqual(20, im.size[0]) | |
| 6268 self.assertEqual(24, im.size[1]) | |
|
268
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|
6269 |
|
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|
6270 |
|
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|
6271 def test_bitbucket_issue_154(self): |
|
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|
6272 # "Matching against list of UID-s by C-MOVE" |
|
589
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diff
changeset
|
6273 # https://bugs.orthanc-server.com/show_bug.cgi?id=154 |
|
268
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|
6274 a = UploadInstance(_REMOTE, 'Issue154-d1.dcm') ['ID'] |
|
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|
6275 b = UploadInstance(_REMOTE, 'Issue154-d2.dcm') ['ID'] |
|
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6276 |
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6277 study = '1.2.826.0.1.3680043.8.498.35214236271657363033644818354280454731' |
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6278 series1 = '1.2.826.0.1.3680043.8.498.12243321927795467590791662266352305113' |
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6279 series2 = '1.2.826.0.1.3680043.8.498.43769499931624584079690260699536473555' |
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6280 |
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6281 # C-FIND is working on list of UIDs |
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6282 i = CallFindScu([ '-k', 'QueryRetrieveLevel=SERIES', |
|
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6283 '-k', 'StudyInstanceUID=%s' % study, |
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6284 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2) ]) |
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6285 series = re.findall('\(0020,000e\).*?\[(.*?)\]', i) |
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6286 self.assertEqual(2, len(series)) |
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6287 self.assertTrue(series1 in series) |
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6288 self.assertTrue(series2 in series) |
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6289 |
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6290 # Individual retrieval is working in Orthanc < 1.6.0 |
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6291 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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6292 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
|
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6293 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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6294 '-k', 'StudyInstanceUID=%s' % study, |
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6295 '-k', 'SeriesInstanceUID=%s' % series1, |
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6296 ]))) |
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6297 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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6298 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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6299 '-k', 'StudyInstanceUID=%s' % study, |
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6300 '-k', 'SeriesInstanceUID=%s' % series2, |
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6301 ]))) |
|
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6302 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
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6303 |
|
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6304 DropOrthanc(_LOCAL) |
|
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6305 |
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6306 # But list matching is working only in Orthanc >= 1.6.0 |
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6307 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
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|
6308 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ |
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|
6309 '--study', '-k', 'QueryRetrieveLevel=SERIES', |
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|
6310 '-k', 'StudyInstanceUID=%s' % study, |
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6311 '-k', 'SeriesInstanceUID=%s\\%s' % (series1, series2), |
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6312 ]))) |
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6313 self.assertEqual(2, len(DoGet(_LOCAL, '/instances'))) |
|
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6314 |
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6315 |
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6316 def test_storage_commitment_api(self): |
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6317 # Storage commitment is available since Orthanc 1.6.0 |
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6318 |
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6319 def WaitTransaction(uid): |
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6320 while True: |
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6321 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
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6322 if s['Status'] != 'Pending': |
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6323 return s |
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|
6324 else: |
|
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6325 time.sleep(0.01) |
|
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6326 |
| 281 | 6327 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
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6328 sopClassUid = '1.2.840.10008.5.1.4.1.1.4' |
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6329 sopInstanceUid = '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' |
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6330 |
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6331 # Against self |
| 281 | 6332 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6333 "DicomInstances" : [ [ sopClassUid, sopInstanceUid ] ], | |
| 6334 }) ['ID'] | |
|
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6335 self.assertTrue(transaction.startswith('2.25.')) |
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6336 |
|
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6337 result = WaitTransaction(transaction) |
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6338 self.assertEqual('ORTHANC', result['RemoteAET']) |
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6339 self.assertEqual('Success', result['Status']) |
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6340 self.assertEqual(1, len(result['Success'])) |
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6341 self.assertEqual(0, len(result['Failures'])) |
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6342 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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6343 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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6344 |
| 281 | 6345 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6346 "DicomInstances" : [ | |
| 6347 { 'SOPClassUID' : sopClassUid, | |
| 6348 'SOPInstanceUID' : sopInstanceUid }, | |
| 6349 ], | |
| 6350 }) | |
| 6351 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) | |
| 6352 self.assertEqual(result, WaitTransaction(transaction)) | |
| 6353 | |
| 6354 tmp = DoPost(_REMOTE, '/modalities/self/storage-commitment', { | |
| 6355 "Resources" : [ | |
| 6356 instance['ID'], | |
| 6357 instance['ParentSeries'], | |
| 6358 instance['ParentStudy'], | |
| 6359 instance['ParentPatient'], | |
| 6360 ] | |
| 6361 }) | |
|
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6362 self.assertEqual(tmp['Path'], '/storage-commitment/%s' % tmp['ID']) |
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6363 self.assertEqual(result, WaitTransaction(transaction)) |
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|
6364 |
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|
6365 |
| 281 | 6366 transaction = DoPost(_REMOTE, '/modalities/self/storage-commitment', { |
| 6367 "DicomInstances" : [ | |
| 6368 [ 'nope', 'nope2' ], | |
| 6369 [ sopClassUid, sopInstanceUid ], | |
| 6370 ], | |
| 6371 }) ['ID'] | |
|
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6372 self.assertTrue(transaction.startswith('2.25.')) |
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6373 |
|
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|
6374 result = WaitTransaction(transaction) |
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6375 self.assertEqual('ORTHANC', result['RemoteAET']) |
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6376 self.assertEqual('Failure', result['Status']) |
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6377 self.assertEqual(1, len(result['Success'])) |
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|
6378 self.assertEqual(1, len(result['Failures'])) |
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6379 self.assertEqual(sopClassUid, result['Success'][0]['SOPClassUID']) |
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6380 self.assertEqual(sopInstanceUid, result['Success'][0]['SOPInstanceUID']) |
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6381 self.assertEqual('nope', result['Failures'][0]['SOPClassUID']) |
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6382 self.assertEqual('nope2', result['Failures'][0]['SOPInstanceUID']) |
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|
6383 self.assertEqual(274, result['Failures'][0]['FailureReason']) |
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6384 |
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|
6385 # Cannot remove items from a failed storage commitment transaction |
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|
6386 self.assertRaises(Exception, lambda: |
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6387 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction)) |
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6388 |
|
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6389 |
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6390 # Against Orthanc 0.8.6, that does not support storage commitment |
|
509
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6391 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
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|
6392 self.assertRaises(Exception, lambda: |
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|
6393 DoPost(_REMOTE, '/modalities/orthanctest/storage-commitment', { |
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6394 "DicomInstances" : [ |
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6395 [ sopClassUid, sopInstanceUid ], |
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6396 ] |
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6397 })) |
|
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6398 |
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|
6399 |
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6400 |
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6401 def test_storage_commitment_store(self): |
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|
6402 # Storage commitment is available since Orthanc 1.6.0 |
|
280
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diff
changeset
|
6403 |
|
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279
diff
changeset
|
6404 def WaitTransaction(uid): |
|
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diff
changeset
|
6405 while True: |
|
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diff
changeset
|
6406 s = DoGet(_REMOTE, '/storage-commitment/%s' % uid) |
|
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testing storage commitment reports
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diff
changeset
|
6407 if s['Status'] != 'Pending': |
|
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279
diff
changeset
|
6408 return s |
|
5daa3896981c
testing storage commitment reports
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279
diff
changeset
|
6409 else: |
|
342
bf8369ea3ff1
more tests of webdav
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parents:
341
diff
changeset
|
6410 time.sleep(0.01) |
|
280
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diff
changeset
|
6411 |
|
279
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starting tests for storage commitment
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diff
changeset
|
6412 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
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diff
changeset
|
6413 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
6414 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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diff
changeset
|
6415 |
|
31e1e49df380
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269
diff
changeset
|
6416 # The Orthanc 0.8.6 from "_LOCAL" does not support storage commitment |
|
509
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6417 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
508
diff
changeset
|
6418 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6419 'Resources' : [ i ], |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
508
diff
changeset
|
6420 'StorageCommitment' : True, |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6421 })) |
|
279
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diff
changeset
|
6422 |
|
31e1e49df380
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269
diff
changeset
|
6423 j = DoPost(_REMOTE, '/modalities/orthanctest/store', { |
|
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diff
changeset
|
6424 'Resources' : [ i ], |
|
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diff
changeset
|
6425 'StorageCommitment' : False, |
|
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269
diff
changeset
|
6426 }) |
|
31e1e49df380
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269
diff
changeset
|
6427 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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269
diff
changeset
|
6428 |
|
31e1e49df380
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269
diff
changeset
|
6429 j = DoPost(_REMOTE, '/modalities/self/store', { |
|
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diff
changeset
|
6430 'Resources' : [ i ], |
|
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starting tests for storage commitment
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269
diff
changeset
|
6431 'StorageCommitment' : True, |
|
31e1e49df380
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269
diff
changeset
|
6432 }) |
|
31e1e49df380
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
269
diff
changeset
|
6433 |
|
31e1e49df380
starting tests for storage commitment
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269
diff
changeset
|
6434 transaction = j['StorageCommitmentTransactionUID'] |
|
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diff
changeset
|
6435 self.assertTrue(transaction.startswith('2.25.')) |
|
280
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279
diff
changeset
|
6436 |
|
5daa3896981c
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279
diff
changeset
|
6437 result = WaitTransaction(transaction) |
|
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279
diff
changeset
|
6438 self.assertEqual('ORTHANC', result['RemoteAET']) |
|
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279
diff
changeset
|
6439 self.assertEqual('Success', result['Status']) |
|
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diff
changeset
|
6440 self.assertEqual(1, len(result['Success'])) |
|
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diff
changeset
|
6441 self.assertEqual(0, len(result['Failures'])) |
|
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diff
changeset
|
6442 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', result['Success'][0]['SOPClassUID']) |
|
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diff
changeset
|
6443 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
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diff
changeset
|
6444 result['Success'][0]['SOPInstanceUID']) |
|
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parents:
279
diff
changeset
|
6445 |
|
5daa3896981c
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279
diff
changeset
|
6446 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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diff
changeset
|
6447 DoPost(_REMOTE, '/storage-commitment/%s/remove' % transaction) |
|
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279
diff
changeset
|
6448 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
285
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6449 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6450 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6451 def test_store_straight(self): # New in Orthanc 1.6.1 |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6452 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6453 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6454 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
281
diff
changeset
|
6455 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6456 dicom = f.read() |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6457 |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6458 self.assertRaises(Exception, lambda: DoPost( |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6459 _REMOTE, '/modalities/orthanctest/store-straight', 'nope', 'nope')) |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6460 |
|
281a32ecc5c1
test_store_straight
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281
diff
changeset
|
6461 answer = DoPost(_REMOTE, '/modalities/orthanctest/store-straight', dicom, 'nope') |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6462 |
|
281a32ecc5c1
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diff
changeset
|
6463 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', |
|
281a32ecc5c1
test_store_straight
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diff
changeset
|
6464 answer['SOPClassUID']) |
|
281a32ecc5c1
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diff
changeset
|
6465 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6466 answer['SOPInstanceUID']) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6467 |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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281
diff
changeset
|
6468 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
281a32ecc5c1
test_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6469 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
289
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6470 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
285
diff
changeset
|
6471 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6472 def test_storescu_transcoding(self): # New in Orthanc 1.7.0 |
|
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diff
changeset
|
6473 # Add a RLE-encoded DICOM file |
|
4a70411ac9ad
test_storescu_transcoding
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285
diff
changeset
|
6474 i = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.5.dcm')['ID'] |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6475 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6476 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6477 rleSize = len(DoGet(_REMOTE, '/instances/%s/file' % i)) |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6478 |
|
4a70411ac9ad
test_storescu_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
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285
diff
changeset
|
6479 # Export the instance, with transcoding: "_REMOTE" is the |
|
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test_storescu_transcoding
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diff
changeset
|
6480 # Orthanc server being tested |
|
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diff
changeset
|
6481 try: |
|
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test_storescu_transcoding
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diff
changeset
|
6482 DoDelete(_REMOTE, '/modalities/toto') |
|
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diff
changeset
|
6483 except: |
|
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test_storescu_transcoding
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diff
changeset
|
6484 pass |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6485 |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6486 params = DoGet(_REMOTE, '/modalities?expand') ['orthanctest'] |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6487 DoPut(_REMOTE, '/modalities/toto', params) |
|
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test_storescu_transcoding
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diff
changeset
|
6488 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
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test_storescu_transcoding
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diff
changeset
|
6489 j = DoGet(_LOCAL, '/instances') |
|
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diff
changeset
|
6490 self.assertEqual(1, len(j)) |
|
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test_storescu_transcoding
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diff
changeset
|
6491 uncompressedSize = len(DoGet(_LOCAL, '/instances/%s/file' % j[0])) |
|
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test_storescu_transcoding
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diff
changeset
|
6492 self.assertTrue(uncompressedSize > rleSize / 2) |
|
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test_storescu_transcoding
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diff
changeset
|
6493 |
|
509
17a74118d73a
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Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
6494 # Export, with transcoding disabled => this fails with 0.8.6 but not with more recent versions |
|
289
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6495 params['AllowTranscoding'] = False |
|
4a70411ac9ad
test_storescu_transcoding
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diff
changeset
|
6496 DoPut(_REMOTE, '/modalities/toto', params) |
|
509
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
6497 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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diff
changeset
|
6498 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain')) |
|
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allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
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diff
changeset
|
6499 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
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parents:
508
diff
changeset
|
6500 DoPost(_REMOTE, '/modalities/toto/store', str(i), 'text/plain') |
|
378
a4b8450a1158
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377
diff
changeset
|
6501 DoDelete(_REMOTE, '/modalities/toto') |
|
290
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
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289
diff
changeset
|
6502 |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6503 |
|
b5333f87065b
test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6504 def test_bitbucket_issue_169(self): |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6505 with open(GetDatabasePath('Issue169.dcm.bz2'), 'rb') as f: |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6506 dicom = bz2.decompress(f.read()) |
|
b5333f87065b
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diff
changeset
|
6507 |
|
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test_bitbucket_issue_169
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diff
changeset
|
6508 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(dicom)) |
|
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diff
changeset
|
6509 |
|
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test_bitbucket_issue_169
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diff
changeset
|
6510 self.assertEqual(44350560, len(dicom)) |
|
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test_bitbucket_issue_169
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diff
changeset
|
6511 i = DoPost(_REMOTE, '/instances', dicom, 'application/dicom') ['ID'] |
|
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test_bitbucket_issue_169
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diff
changeset
|
6512 |
|
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test_bitbucket_issue_169
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289
diff
changeset
|
6513 tags = DoGet(_REMOTE, '/instances/%s/tags' % i) |
|
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test_bitbucket_issue_169
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diff
changeset
|
6514 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
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test_bitbucket_issue_169
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diff
changeset
|
6515 |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6516 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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test_bitbucket_issue_169
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diff
changeset
|
6517 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') |
|
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test_bitbucket_issue_169
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diff
changeset
|
6518 j = DoGet(_LOCAL, '/instances') |
|
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test_bitbucket_issue_169
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diff
changeset
|
6519 self.assertEqual(1, len(j)) |
|
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test_bitbucket_issue_169
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6520 |
|
b5333f87065b
test_bitbucket_issue_169
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289
diff
changeset
|
6521 # In Orthanc <= 1.6.1, transfer syntax changed from "Explicit |
|
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test_bitbucket_issue_169
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diff
changeset
|
6522 # VR Little Endian" (1.2.840.10008.1.2.1) to "Implicit VR |
|
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test_bitbucket_issue_169
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diff
changeset
|
6523 # Little Endian" (1.2.840.10008.1.2) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6524 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6525 DoGet(_LOCAL, '/instances/%s/file' % j[0]))) |
|
290
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test_bitbucket_issue_169
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289
diff
changeset
|
6526 |
|
b5333f87065b
test_bitbucket_issue_169
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diff
changeset
|
6527 # In Orthanc <= 1.6.1, the value of the private tags was lost |
|
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test_bitbucket_issue_169
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diff
changeset
|
6528 # because of this transcoding |
|
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test_bitbucket_issue_169
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diff
changeset
|
6529 tags = DoGet(_LOCAL, '/instances/%s/tags' % j[0]) |
|
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test_bitbucket_issue_169
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parents:
289
diff
changeset
|
6530 self.assertEqual('NORMAL', tags['1337,1001']['Value']) |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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290
diff
changeset
|
6531 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6532 |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
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301
diff
changeset
|
6533 def test_modify_transcode_instance(self): |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6534 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6535 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6536 DoGet(_REMOTE, '/instances/%s/file' % i))) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6537 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
6538 a = ExtractDicomTags(DoGet(_REMOTE, '/instances/%s/file' % i), [ 'SOPInstanceUID' ]) [0] |
|
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HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
6539 self.assertTrue(len(a) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6540 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6541 SYNTAXES = [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
6542 '1.2.840.10008.1.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6543 '1.2.840.10008.1.2.1', |
|
300
d6c2eb5a2603
disabling test on Deflated Explicit VR Little Endian
Sebastien Jodogne <s.jodogne@gmail.com>
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299
diff
changeset
|
6544 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
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293
diff
changeset
|
6545 '1.2.840.10008.1.2.2', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6546 '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6547 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6548 '1.2.840.10008.1.2.4.57', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6549 '1.2.840.10008.1.2.4.70', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6550 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6551 |
| 304 | 6552 if HasGdcmPlugin(_REMOTE): |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6553 SYNTAXES = SYNTAXES + [ |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6554 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6555 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6556 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6557 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6558 ] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6559 |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6560 for syntax in SYNTAXES: |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6561 transcoded = DoPost(_REMOTE, '/instances/%s/modify' % i, { |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6562 'Transcode' : syntax, |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6563 'Keep' : [ 'SOPInstanceUID' ], |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6564 'Force' : True, |
|
291
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6565 }) |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6566 |
|
cfa785074c64
test_modify_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
290
diff
changeset
|
6567 self.assertEqual(syntax, GetTransferSyntax(transcoded)) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6568 |
|
299
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6569 b = ExtractDicomTags(transcoded, [ 'SOPInstanceUID' ]) [0] |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6570 self.assertTrue(len(b) > 20) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6571 if syntax in [ '1.2.840.10008.1.2.4.50', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6572 '1.2.840.10008.1.2.4.51', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6573 '1.2.840.10008.1.2.4.81', |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6574 '1.2.840.10008.1.2.4.91' ]: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6575 # Lossy transcoding: The SOP instance UID must have changed |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6576 self.assertNotEqual(a, b) |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6577 else: |
|
c2144cf4bd83
HasGdcmPlugin() test
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
293
diff
changeset
|
6578 self.assertEqual(a, b) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6579 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6580 def test_archive_transcode(self): |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6581 info = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6582 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6583 # GET on "/media" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6584 z = GetArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6585 self.assertEqual(2, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6586 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6587 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6588 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/media?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6589 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6590 z = GetArchive(_REMOTE, '/patients/%s/media?transcode=1.2.840.10008.1.2.4.50' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6591 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6592 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6593 z = GetArchive(_REMOTE, '/studies/%s/media?transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6594 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6595 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6596 z = GetArchive(_REMOTE, '/series/%s/media?transcode=1.2.840.10008.1.2.4.57' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6597 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6598 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6599 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6600 # POST on "/media" |
|
032722c3e919
extended test_archive_transcode
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diff
changeset
|
6601 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6602 _REMOTE, '/patients/%s/media' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6603 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6604 z = PostArchive(_REMOTE, '/patients/%s/media' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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292
diff
changeset
|
6605 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6606 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6607 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
6608 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6609 z = PostArchive(_REMOTE, '/studies/%s/media' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6610 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6611 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6612 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6613 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6614 z = PostArchive(_REMOTE, '/series/%s/media' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6615 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6616 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6617 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6618 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6619 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6620 # GET on "/archive" |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6621 z = GetArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6622 self.assertEqual(1, len(z.namelist())) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6623 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6624 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6625 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients/%s/archive?transcode=nope' % info['ParentPatient'])) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6626 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6627 z = GetArchive(_REMOTE, '/patients/%s/archive?transcode=1.2.840.10008.1.2' % info['ParentPatient']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6628 self.assertEqual('1.2.840.10008.1.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6629 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6630 z = GetArchive(_REMOTE, '/studies/%s/archive?transcode=1.2.840.10008.1.2.2' % info['ParentStudy']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6631 self.assertEqual('1.2.840.10008.1.2.2', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6632 |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6633 z = GetArchive(_REMOTE, '/series/%s/archive?transcode=1.2.840.10008.1.2.4.70' % info['ParentSeries']) |
|
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6634 self.assertEqual('1.2.840.10008.1.2.4.70', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6635 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6636 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6637 # POST on "/archive" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6638 self.assertRaises(Exception, lambda: PostArchive( |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6639 _REMOTE, '/patients/%s/archive' % info['ParentPatient'], { 'Transcode' : 'nope' })) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6640 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6641 z = PostArchive(_REMOTE, '/patients/%s/archive' % info['ParentPatient'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6642 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6643 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6644 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6645 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6646 z = PostArchive(_REMOTE, '/studies/%s/archive' % info['ParentStudy'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6647 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6648 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6649 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6650 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6651 z = PostArchive(_REMOTE, '/series/%s/archive' % info['ParentSeries'], { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6652 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6653 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6654 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
292
e1827a4f5d3b
test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
291
diff
changeset
|
6655 |
|
293
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6656 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6657 # "/tools/create-*" |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6658 z = PostArchive(_REMOTE, '/tools/create-archive', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6659 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6660 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6661 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6662 self.assertEqual(1, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6663 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6664 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6665 z = PostArchive(_REMOTE, '/tools/create-media', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6666 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6667 'Transcode' : '1.2.840.10008.1.2.4.51', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6668 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6669 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6670 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6671 |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6672 z = PostArchive(_REMOTE, '/tools/create-media-extended', { |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6673 'Resources' : [ info['ParentStudy'] ], |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6674 'Transcode' : '1.2.840.10008.1.2.4.57', |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6675 }) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6676 self.assertEqual(2, len(z.namelist())) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6677 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
032722c3e919
extended test_archive_transcode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
292
diff
changeset
|
6678 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6679 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6680 z = GetArchive(_REMOTE, '/tools/create-archive?resources=%s&transcode=1.2.840.10008.1.2.4.50' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6681 self.assertEqual(1, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6682 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax(z.read(z.namelist()[0]))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6683 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6684 z = GetArchive(_REMOTE, '/tools/create-media?resources=%s&transcode=1.2.840.10008.1.2.4.51' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6685 self.assertEqual(2, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6686 self.assertEqual('1.2.840.10008.1.2.4.51', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6687 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6688 z = GetArchive(_REMOTE, '/tools/create-media-extended?resources=%s&transcode=1.2.840.10008.1.2.4.57' % info['ParentStudy']) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6689 self.assertEqual(2, len(z.namelist())) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6690 self.assertEqual('1.2.840.10008.1.2.4.57', GetTransferSyntax(z.read('IMAGES/IM0'))) |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6691 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6692 |
|
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
6693 |
| 308 | 6694 |
| 587 | 6695 def test_download_file_transcode(self): |
| 6696 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 6697 | |
| 6698 info = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.1.dcm') | |
| 6699 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( | |
| 6700 DoGet(_REMOTE, '/instances/%s/file' % info['ID']))) | |
| 6701 | |
| 6702 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( | |
| 6703 DoGet(_REMOTE, '/instances/%s/file?transcode=1.2.840.10008.1.2.4.50' % info['ID']))) | |
| 6704 | |
| 6705 | |
|
301
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6706 def test_modify_keep_source(self): |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6707 # https://groups.google.com/d/msg/orthanc-users/CgU-Wg8vDio/BY5ZWcDEAgAJ |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6708 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6709 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6710 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6711 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6712 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6713 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6714 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6715 'KeepSource' : True, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6716 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6717 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6718 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6719 self.assertEqual(2, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6720 self.assertTrue(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6721 self.assertTrue(j['ID'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6722 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6723 DoDelete(_REMOTE, '/studies/%s' % j['ID']) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6724 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6725 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6726 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6727 'Replace' : { |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6728 'StationName' : 'TEST', |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6729 }, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6730 'KeepSource' : False, |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6731 }) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6732 |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6733 s = DoGet(_REMOTE, '/studies') |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6734 self.assertEqual(1, len(s)) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6735 self.assertFalse(i['ParentStudy'] in s) |
|
6652d5720a45
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
300
diff
changeset
|
6736 self.assertTrue(j['ID'] in s) |
|
302
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6737 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6738 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6739 def test_modify_transcode_study(self): |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6740 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6741 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6742 DoGet(_REMOTE, '/instances/%s/file' % i['ID']))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6743 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6744 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6745 j = DoPost(_REMOTE, '/studies/%s/modify' % i['ParentStudy'], { |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6746 'Transcode' : '1.2.840.10008.1.2.4.50', |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6747 'KeepSource' : False |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6748 }) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6749 |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6750 k = DoGet(_REMOTE, '/instances') |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6751 self.assertEqual(1, len(k)) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6752 self.assertEqual(i['ID'], DoGet(_REMOTE, '/instances/%s/metadata?expand' % k[0]) ['ModifiedFrom']) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6753 self.assertEqual('1.2.840.10008.1.2.4.50', GetTransferSyntax( |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6754 DoGet(_REMOTE, '/instances/%s/file' % k[0]))) |
|
22b6dd0f8c84
test_modify_transcode_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
6755 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
6756 |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6757 def test_modify_need_force_to_change_uids(self): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6758 def Modify(level, resourceId, replaceTags, force, keepSource): |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6759 return DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6760 'Replace' : replaceTags, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6761 'Force': force, |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6762 'KeepSource' : keepSource |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6763 }) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6764 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6765 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6766 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6767 i = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6768 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6769 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6770 # can not change the StudyInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6771 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6772 Modify('studies', i['ParentStudy'], {'StudyInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6773 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6774 # can not change the SeriesInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6775 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6776 Modify('series', i['ParentSeries'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6777 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6778 # can not change the SOPInstanceUID unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6779 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6780 Modify('instances', i['ID'], {'SOPInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6781 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6782 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6783 # can not change the PatientID of a study unless you force it |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6784 self.assertRaises(Exception, lambda: Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6785 self.assertRaises(Exception, lambda: Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6786 self.assertRaises(Exception, lambda: Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=False, keepSource=True)) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6787 |
| 500 | 6788 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6789 # this was forbidden even with Force=true till 1.11.2 included |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6790 Modify('studies', i['ParentStudy'], {'PatientID': 'NEW'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6791 Modify('series', i['ParentSeries'], {'StudyInstanceUID': '1.3'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6792 Modify('instances', i['ID'], {'SeriesInstanceUID': '1.2'}, force=True, keepSource=True) |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6793 |
|
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
6794 |
|
504
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6795 def test_modify_study_module_reconstruction(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6796 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6797 def UploadAndModify(level, resourceId, replaceTags, force, keepSource, dropOrthanc=True): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6798 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6799 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6800 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6801 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6802 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6803 UploadFolder(_REMOTE, 'Knee/T2') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6804 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6805 if dropOrthanc: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6806 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6807 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6808 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % (level, resourceId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6809 'Replace' : replaceTags, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6810 'Force': force, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6811 'KeepSource' : keepSource |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6812 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6813 modifiedResource = DoGet(_REMOTE, '/%s/%s' % (level, modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6814 return (modifyResponse, modifiedResource) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6815 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6816 kneeSeriesT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6817 kneeSeriesT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6818 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6819 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6820 kneeStudyInstanceUID = '2.16.840.1.113669.632.20.121711.10000160881' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6821 kneeSeriesInstanceUIDT1 = '1.3.46.670589.11.17521.5.0.3124.2008081908564160709' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6822 kneeSeriesInstanceUIDT2 = '1.3.46.670589.11.17521.5.0.3124.2008081909090037350' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6823 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6824 ####### study level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6825 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6826 # modify study description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6827 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6828 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6829 'StudyDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6830 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6831 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6832 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6833 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6834 # modify patient name at study level and make sure the PatientMainDicomTags are updated + the patient has been updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6835 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6836 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6837 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6838 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6839 self.assertEqual(kneeStudy, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6840 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6841 patient = DoGet(_REMOTE, '/patients/%s' % kneePatient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6842 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6843 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6844 # modify patient name and patient id at study level and make sure the PatientMainDicomTags are updated + a new patient has been created + the old one does not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6845 modifyResponse, modifiedResource = UploadAndModify('studies', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6846 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6847 'PatientID': 'TOTO_ID', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6848 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6849 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6850 self.assertNotEqual(kneeStudy, modifyResponse['ID']) # the study has changed since the PatientID has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6851 self.assertEqual('TOTO', modifiedResource['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6852 self.assertEqual('TOTO_ID', modifiedResource['PatientMainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6853 patient = DoGet(_REMOTE, '/patients/%s' % modifyResponse['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6854 self.assertEqual('TOTO', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6855 self.assertEqual('TOTO_ID', patient['MainDicomTags']['PatientID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6856 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6857 ####### series level tests ####### |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6858 # modify series description and make sure the MainDicomTags are updated |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6859 modifyResponse, modifiedResource = UploadAndModify('series', kneeStudy, replaceTags={ |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6860 'SeriesInstanceUID': kneeSeriesInstanceUIDT1, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6861 'StudyInstanceUID': kneeStudyInstanceUID, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6862 'SeriesDescription': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6863 }, force=True, keepSource=True) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6864 self.assertEqual(kneeSeriesT1, modifyResponse['ID']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6865 self.assertEqual('TOTO', modifiedResource['MainDicomTags']['SeriesDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6866 self.assertEqual(kneeStudy, modifyResponse['ParentResources'][0]) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6867 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6868 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6869 def test_rename_patient_with_multiple_studies(self): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6870 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6871 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6872 patientOrthancId = '5436938e-7ae68340-5ea6ad3c-4e6e09bd-1bd335de' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6873 patientDicomId = 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6874 patientName = 'Test' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6875 study1234 = '72de3b86-da4b2556-bb33f32f-d1d84f80-fb017059' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6876 study2345 = '3594f32b-dcf60e81-58252b67-66222714-c09fca81' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6877 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6878 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6879 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6880 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6881 # each sub-test is in a dedicated 'if' for clarity |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6882 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6883 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6884 # it shall be impossible to rename a patient when modifying a study if that patient already has other studies |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6885 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6886 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6887 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6888 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6889 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6890 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6891 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6892 # rename the patient (at patient level) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6893 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6894 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6895 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6896 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6897 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6898 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6899 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6900 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6901 # make sure the patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6902 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6903 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6904 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6905 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6906 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6907 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6908 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6909 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6910 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6911 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6912 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6913 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6914 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6915 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6916 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID, SeriesInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6917 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6918 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6919 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6920 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6921 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6922 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6923 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6924 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6925 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6926 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6927 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6928 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6929 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6930 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6931 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6932 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6933 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6934 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6935 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6936 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6937 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6938 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6939 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6940 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6941 # it shall not be possible to keep all dicom UID and have KeepSource at False since the modified instances |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6942 # would have the same orthanc ids as the source ids -> they would be deleted |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6943 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('patients', study1234), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6944 'Replace' : {'PatientName': "TOTO"}, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6945 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6946 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6947 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6948 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6949 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6950 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6951 # rename the patient (at patient level) and don't keep sources and preserve all DicomID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6952 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6953 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6954 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6955 # rename the patient (at patient level) and don't keep sources and preserve StudyInstanceUID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6956 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('patients', patientOrthancId), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6957 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6958 'PatientName': 'TOTO' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6959 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6960 'Keep': ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6961 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6962 'KeepSource' : True |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6963 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6964 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6965 # make sure tha patient name has been edited at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6966 self.assertEqual('TOTO', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6967 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6968 # there should only be 2 studies since we have set KeepSource=False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6969 self.assertEqual(2, len(modifiedPatient['Studies'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6970 modifiedStudy1 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][0])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6971 modifiedStudy2 = DoGet(_REMOTE, '/%s/%s' % ('studies', modifiedPatient['Studies'][1])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6972 # the StudyInstanceUID shall not have changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6973 self.assertIn(modifiedStudy1['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6974 self.assertIn(modifiedStudy2['MainDicomTags']['StudyInstanceUID'], ['1.2.3', '2.3.4']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6975 # the DB model of parent shall have been reconstructed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6976 self.assertEqual('TOTO', modifiedStudy1['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6977 self.assertEqual('TOTO', modifiedStudy2['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6978 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6979 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6980 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6981 # try to attach the knee study to an existing patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6982 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6983 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6984 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6985 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6986 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6987 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6988 # try to change the PatientID at study level. This only works if we specify all Patient Tags and if they are identical to the existing Patient in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6989 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6990 # this should fail if only specifying the PatientID |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6991 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6992 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6993 'PatientID': 'TEST_1' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6994 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6995 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6996 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6997 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6998 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
6999 # this should fail if specifying all tags but one of them is not correct |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7000 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7001 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7002 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7003 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7004 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7005 'PatientSex': 'F' # this is wrong ! |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7006 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7007 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7008 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7009 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7010 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7011 # this should fail if specifying a tag that is not defined in DB for that patient |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7012 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7013 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7014 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7015 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7016 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7017 'PatientSex': 'M', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7018 '0010,1000': 'TUTU' # this does not exist in DB |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7019 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7020 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7021 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7022 })) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7023 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7024 # this should now work with all correct tags |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7025 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7026 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7027 'PatientID': 'TEST_1', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7028 'PatientName': 'Test', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7029 'PatientBirthDate': '19000101', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7030 'PatientSex': 'M' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7031 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7032 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7033 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7034 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7035 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7036 self.assertEqual('Test', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7037 patient = DoGet(_REMOTE, '/%s/%s' % ('patients', patientOrthancId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7038 # make sure tha patient name remains the same at patient level |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7039 self.assertEqual('Test', patient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7040 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7041 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7042 if True: |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7043 # try to edit patient in Knee (only study from this patient) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7044 DropOrthanc(_REMOTE) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7045 UploadFolder(_REMOTE, 'PatientWith2studies') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7046 UploadFolder(_REMOTE, 'Knee/T1') |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7047 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7048 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7049 originalKneePatientId = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7050 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7051 originalKneePatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7052 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7053 # try to change the PatientName and StudyDescription at study level. |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7054 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7055 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7056 'PatientName': 'Test Knee', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7057 'StudyDescription': 'Knee study' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7058 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7059 'Keep': ['StudyInstanceUID'], |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7060 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7061 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7062 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7063 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7064 self.assertEqual('Test Knee', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7065 # reload the patient, it shall have been updated as well (and kept the same ID since we did not change the PatientID) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7066 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId)) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7067 self.assertEqual('Test Knee', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7068 |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7069 # try to change the PatientID and PatientName and StudyDescription at study level. Since we use a new PatientID, we can modify its name too |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7070 modifyResponse = DoPost(_REMOTE, '/%s/%s/modify' % ('studies', kneeStudy), { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7071 'Replace' : { |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7072 'PatientName': 'Test Knee 2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7073 'PatientID': 'TEST_KNEE_2', |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7074 'StudyDescription': 'Knee study 2' |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7075 }, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7076 'Force': True, |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7077 'KeepSource' : False |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7078 }) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7079 modifiedStudy = DoGet(_REMOTE, '/%s/%s' % ('studies', modifyResponse['ID'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7080 self.assertEqual('Test Knee 2', modifiedStudy['PatientMainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7081 self.assertEqual('Knee study 2', modifiedStudy['MainDicomTags']['StudyDescription']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7082 # reload the patient, now, its orthanc id has changed |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7083 modifiedPatient = DoGet(_REMOTE, '/%s/%s' % ('patients', modifiedStudy['ParentPatient'])) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7084 self.assertEqual('Test Knee 2', modifiedPatient['MainDicomTags']['PatientName']) |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7085 # the previous patient shall not exist anymore |
|
16ff0375835d
new tests and modified tests for new DicomModificationJob features
Alain Mazy <am@osimis.io>
parents:
501
diff
changeset
|
7086 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/%s/%s' % ('patients', originalKneePatientId))) |
|
498
62f37c13d4d0
new tests for modifications after sanity checks cleanup
Alain Mazy <am@osimis.io>
parents:
497
diff
changeset
|
7087 |
|
305
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7088 def test_store_peer_transcoding(self): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7089 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID'] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7090 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7091 SYNTAXES = [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7092 '1.2.840.10008.1.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7093 '1.2.840.10008.1.2.1', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7094 #'1.2.840.10008.1.2.1.99', # Deflated Explicit VR Little Endian (cannot be decoded in debug mode if Orthanc is statically linked against DCMTK 3.6.5) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7095 '1.2.840.10008.1.2.2', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7096 '1.2.840.10008.1.2.4.50', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7097 '1.2.840.10008.1.2.4.51', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7098 '1.2.840.10008.1.2.4.57', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7099 '1.2.840.10008.1.2.4.70', |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7100 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7101 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7102 if HasGdcmPlugin(_REMOTE): |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7103 SYNTAXES = SYNTAXES + [ |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7104 '1.2.840.10008.1.2.4.80', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7105 '1.2.840.10008.1.2.4.81', # This makes DCMTK 3.6.2 crash |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7106 '1.2.840.10008.1.2.4.90', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7107 '1.2.840.10008.1.2.4.91', # JPEG2k, unavailable without GDCM |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7108 ] |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7109 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7110 for syntax in SYNTAXES: |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7111 body = { |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7112 'Resources' : [ i ], |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7113 } |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7114 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7115 if syntax != '1.2.840.10008.1.2.1': |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7116 body['Transcode'] = syntax |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7117 |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7118 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7119 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7120 DoPost(_REMOTE, '/peers/peer/store', body, 'text/plain') |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7121 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7122 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7123 self.assertEqual(syntax, GetTransferSyntax( |
|
ed20ead1a8b6
test_store_peer_transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7124 DoGet(_LOCAL, '/instances/%s/file' % DoGet(_LOCAL, '/instances') [0]))) |
|
ed20ead1a8b6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7125 |
|
ed20ead1a8b6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
304
diff
changeset
|
7126 DropOrthanc(_LOCAL) |
| 308 | 7127 |
| 7128 | |
| 295 | 7129 def test_getscu(self): |
| 307 | 7130 def CleanTarget(): |
| 7131 if os.path.isdir('/tmp/GETSCU'): | |
| 7132 shutil.rmtree('/tmp/GETSCU') | |
| 7133 os.makedirs('/tmp/GETSCU') | |
| 7134 | |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
7135 env = {} |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
7136 if _DOCKER: |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
7137 # This is "getscu" from DCMTK 3.6.5 compiled using LSB, |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
7138 # and running in a GNU/Linux distribution running DCMTK |
|
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
7139 # 3.6.0. Tell "getscu" where it can find the DICOM dictionary. |
| 529 | 7140 env['DCMDICTPATH'] = os.environ.get('DCMDICTPATH', '/usr/share/libdcmtk2/dicom.dic') |
|
306
da2be3ff2db5
fix getscu binaries
Sebastien Jodogne <s.jodogne@gmail.com>
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296
diff
changeset
|
7141 |
| 295 | 7142 # no transcoding required |
| 307 | 7143 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 7144 | |
| 7145 CleanTarget() | |
| 295 | 7146 |
|
306
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
7147 subprocess.check_call([ |
|
da2be3ff2db5
fix getscu binaries
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296
diff
changeset
|
7148 FindExecutable('getscu'), |
|
da2be3ff2db5
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diff
changeset
|
7149 _REMOTE['Server'], |
|
da2be3ff2db5
fix getscu binaries
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parents:
296
diff
changeset
|
7150 str(_REMOTE['DicomPort']), |
|
da2be3ff2db5
fix getscu binaries
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parents:
296
diff
changeset
|
7151 '-aec', 'ORTHANC', |
|
da2be3ff2db5
fix getscu binaries
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diff
changeset
|
7152 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc |
| 307 | 7153 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775', |
|
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7154 '-k', '0008,0052=STUDY', |
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7155 '--output-directory', '/tmp/GETSCU/' |
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7156 ], env = env) |
| 295 | 7157 |
| 311 | 7158 f1 = '/tmp/GETSCU/MR.1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549' |
| 7159 self.assertTrue(os.path.isfile(f1)) | |
| 7160 with open(f1, 'rb') as f: | |
| 543 | 7161 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
| 311 | 7162 |
| 307 | 7163 CleanTarget() |
| 295 | 7164 |
| 7165 # transcoding required | |
| 311 | 7166 UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm') |
| 307 | 7167 |
| 7168 subprocess.check_call([ | |
| 7169 FindExecutable('getscu'), | |
| 7170 _REMOTE['Server'], | |
| 7171 str(_REMOTE['DicomPort']), | |
| 7172 '-aec', 'ORTHANC', | |
| 7173 '-aet', 'ORTHANCTEST', # pretend to be the other orthanc | |
| 311 | 7174 '-k', '0020,000d=2.16.840.1.113669.632.20.1211.10000357775\\1.2.840.113663.1298.6234813.1.298.20000329.1115122', |
| 307 | 7175 '-k', '0008,0052=STUDY', |
| 7176 '--output-directory', '/tmp/GETSCU/' | |
| 7177 ], env = env) | |
| 7178 | |
| 311 | 7179 self.assertTrue(os.path.isfile(f1)) |
| 7180 with open(f1, 'rb') as f: | |
| 543 | 7181 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read(), encoding='ISO-8859-1')) |
| 311 | 7182 |
| 7183 # This file is transcoded from "1.2.840.10008.1.2.4.50" to "1.2.840.10008.1.2.1" | |
| 7184 # (LittleEndianExplicit is proposed by default by "getscu") | |
| 7185 f2 = '/tmp/GETSCU/US.1.2.840.113663.1298.1.3.715.20000329.1115326' | |
| 7186 self.assertTrue(os.path.isfile(f2)) | |
| 7187 with open(f2, 'rb') as f: | |
| 7188 self.assertEqual('1.2.840.10008.1.2.1', GetTransferSyntax(f.read())) | |
|
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|
7189 |
|
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|
7190 |
|
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7191 def test_findscu_truncation(self): |
|
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7192 # https://groups.google.com/forum/#!msg/orthanc-users/FkckWAHvso8/UbRBAhQ5CwAJ |
| 585 | 7193 # Fixed by: https://orthanc.uclouvain.be/hg/orthanc/rev/2724977419fb |
|
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7194 UploadInstance(_REMOTE, 'Multiframe.dcm') |
|
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7195 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm') |
|
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|
7196 |
|
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|
7197 study = '1.3.46.670589.7.5.8.80001255161.20000323.151537.1' |
|
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7198 |
|
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7199 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyInstanceUID' ]) |
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7200 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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7201 self.assertEqual(2, len(result)) |
|
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7202 |
|
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7203 # The "StudyInstanceUID" is set as a list of 5 times the same |
|
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7204 # study, leading to a string of 249 characters |
|
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|
7205 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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|
7206 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s' % (( study, ) * 5) ]) |
|
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7207 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
7208 self.assertEqual(1, len(result)) |
|
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7209 |
|
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7210 # The "StudyInstanceUID" is set as a list of 6 times the same |
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7211 # study, leading to a string of 299 characters. In Orthanc <= |
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7212 # 1.7.2, this is above the value of ORTHANC_MAXIMUM_TAG_LENGTH |
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7213 # == 256, and is thus wiped out by C-FIND SCP. As a |
|
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7214 # consequence, Orthanc <= 1.7.2 doesn't apply the filter on |
|
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7215 # "StudyInstanceUID" and returns all the available |
|
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7216 # studies (i.e. 2). This issue was fixed in Orthanc 1.7.3. |
|
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7217 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', |
|
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7218 'StudyInstanceUID=%s\\%s\\%s\\%s\\%s\\%s' % (( study, ) * 6) ]) |
|
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7219 result = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
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|
7220 self.assertEqual(1, len(result)) |
|
328
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|
7221 |
|
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diff
changeset
|
7222 |
|
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|
7223 def test_store_compressed(self): |
|
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7224 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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|
7225 dicom = f.read() |
|
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|
7226 i = DoPost(_REMOTE, '/instances', dicom) ['ID'] |
|
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|
7227 sourceSize = len(dicom) |
|
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|
7228 |
|
328
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|
7229 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7230 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
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|
7231 |
|
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|
7232 # Sending to the local Orthanc 0.8.6 server, without compression: OK |
|
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|
7233 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
7234 _REMOTE, '/peers/peer/store', { |
|
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|
7235 'Resources' : [ i ], |
|
8a462f9c5a97
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|
7236 'Synchronous' : False, |
|
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|
7237 })) |
|
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|
7238 |
|
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diff
changeset
|
7239 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
7240 self.assertFalse(job['Content']['Compress']) |
|
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|
7241 self.assertEqual('', job['Content']['Peer'][2]) # Password must not be reported |
|
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|
7242 self.assertEqual(str(sourceSize), job['Content']['Size']) |
|
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|
7243 |
|
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|
7244 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7245 DropOrthanc(_LOCAL) |
|
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|
7246 |
|
509
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diff
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|
7247 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
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|
7248 # Sending to the local Orthanc 0.8.6 server, with compression: |
|
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|
7249 # Not supported by Orthanc 0.8.6 => failure |
|
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|
7250 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/peers/peer/store', { |
|
328
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|
7251 'Resources' : [ i ], |
|
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|
7252 'Compress' : True, |
|
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|
7253 })) |
|
509
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|
7254 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) |
|
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|
7255 |
|
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|
7256 # Sending to the tested remote server, with compression: OK |
|
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|
7257 jobId = MonitorJob2(_REMOTE, lambda: DoPost( |
|
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|
7258 _REMOTE, '/peers/self/store', { |
|
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|
7259 'Resources' : [ i ], |
|
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|
7260 'Compress' : True, |
|
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|
7261 'Synchronous' : False, |
|
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|
7262 })) |
|
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|
7263 |
|
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|
7264 job = DoGet(_REMOTE, '/jobs/%s' % jobId) |
|
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|
7265 self.assertTrue(job['Content']['Compress']) |
|
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|
7266 |
|
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|
7267 # Compression must have divided the size of the sent data at least twice |
|
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|
7268 self.assertLess(int(job['Content']['Size']), sourceSize / 2) |
| 332 | 7269 |
| 7270 | |
| 7271 def test_move_ambra(self): | |
| 7272 # "Orthanc + Ambra: Query/Retrieve" (2020-08-25) | |
| 7273 # https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ | |
| 7274 | |
| 7275 UploadInstance(_REMOTE, '2019-06-17-VedranZdesic.dcm') | |
| 7276 | |
| 7277 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7278 '--study', | |
| 7279 '-k', 'StudyInstanceUID=' | |
| 7280 ]))) | |
| 7281 | |
| 7282 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7283 '--study', | |
| 7284 '-k', 'AccessionNumber=', | |
| 7285 ]))) | |
| 7286 | |
| 7287 self.assertFalse(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7288 '--study', | |
| 7289 '-k', 'AccessionNumber=', | |
| 7290 '-k', 'StudyInstanceUID=' | |
| 7291 ]))) | |
| 7292 | |
| 7293 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7294 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7295 '--study', | |
| 7296 '-k', 'AccessionNumber=CT16000988', | |
| 7297 '-k', 'StudyInstanceUID=', | |
| 7298 ]))) | |
| 7299 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7300 DropOrthanc(_LOCAL) | |
| 7301 | |
| 7302 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7303 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7304 '--study', | |
| 7305 '-k', 'AccessionNumber=CT16000988', | |
| 7306 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39', | |
| 7307 ]))) | |
| 7308 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7309 DropOrthanc(_LOCAL) | |
| 7310 | |
| 7311 # This fails on Orthanc <= 1.7.3 | |
| 7312 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 7313 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([ | |
| 7314 '--study', | |
| 7315 '-k', 'AccessionNumber=', | |
| 7316 '-k', 'StudyInstanceUID=1.2.840.113619.2.278.3.4194965761.659.1468842739.39' | |
| 7317 ]))) | |
| 7318 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 7319 DropOrthanc(_LOCAL) | |
|
333
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diff
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|
7320 |
|
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diff
changeset
|
7321 |
|
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diff
changeset
|
7322 def test_decode_elscint(self): |
|
695be643b0f4
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diff
changeset
|
7323 # https://groups.google.com/g/orthanc-users/c/d9anAx6lSis/m/qEzm1x3PAAAJ |
|
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diff
changeset
|
7324 a = UploadInstance(_REMOTE, '2020-09-12-ELSCINT1-PMSCT_RLE1.dcm')['ID'] |
|
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diff
changeset
|
7325 b = UploadInstance(_REMOTE, '2020-09-11-Christopher-ELSCINT1-Raw.dcm')['ID'] |
|
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diff
changeset
|
7326 |
|
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diff
changeset
|
7327 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % a) |
|
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diff
changeset
|
7328 self.assertEqual("L", im.mode) |
|
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diff
changeset
|
7329 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
7330 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
7331 |
|
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diff
changeset
|
7332 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % b) |
|
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diff
changeset
|
7333 self.assertEqual("L", im.mode) |
|
695be643b0f4
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diff
changeset
|
7334 self.assertEqual(512, im.size[0]) |
|
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diff
changeset
|
7335 self.assertEqual(512, im.size[1]) |
|
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diff
changeset
|
7336 |
|
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diff
changeset
|
7337 # The two tests below fail on Orthanc <= 1.7.3 |
|
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diff
changeset
|
7338 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % a) |
|
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diff
changeset
|
7339 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
7340 |
|
695be643b0f4
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diff
changeset
|
7341 raw = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % b) |
|
695be643b0f4
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diff
changeset
|
7342 self.assertEqual(512 * 512 * 2, len(raw)) |
|
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diff
changeset
|
7343 |
|
334
971ff285302b
test_rest_modalities_in_study_2
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333
diff
changeset
|
7344 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7345 def test_rest_modalities_in_study_2(self): |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7346 # Problem reported by Alain Mazy on 2020-09-15 |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7347 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7348 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
971ff285302b
test_rest_modalities_in_study_2
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diff
changeset
|
7349 |
|
335
96718de2f29c
simplification and fix of test_incoming_findscu
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diff
changeset
|
7350 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=' ]) |
|
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diff
changeset
|
7351 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) |
|
96718de2f29c
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diff
changeset
|
7352 self.assertEqual(1, len(modalitiesInStudy)) |
|
96718de2f29c
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diff
changeset
|
7353 self.assertEqual('CT\\PT ', modalitiesInStudy[0]) |
|
96718de2f29c
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diff
changeset
|
7354 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
7355 for i in [ '', 'CT', 'PT', 'UX', 'UX\\MR', 'CT\\PT', 'UX\\PT', 'CT\\PT', 'UX\\CT\\PT' ]: |
|
96718de2f29c
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diff
changeset
|
7356 # The empty string '' corresponds to universal matching. |
|
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diff
changeset
|
7357 # The case where "i == 'CT'" failed in Orthanc <= 1.7.3. |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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parents:
334
diff
changeset
|
7358 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
334
diff
changeset
|
7359 if i in [ 'UX', 'UX\\MR' ]: |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
7360 expected = 0 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
7361 else: |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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334
diff
changeset
|
7362 expected = 1 |
|
96718de2f29c
simplification and fix of test_incoming_findscu
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parents:
334
diff
changeset
|
7363 |
|
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7364 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7365 'Query' : { 'ModalitiesInStudy' : i }}) |
|
335
96718de2f29c
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diff
changeset
|
7366 self.assertEqual(expected, len(a)) |
|
334
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7367 |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7368 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0020,000d=', '-k', '0008,0061=%s' % i ]) |
|
971ff285302b
test_rest_modalities_in_study_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
333
diff
changeset
|
7369 studyInstanceUid = re.findall('\(0020,000d\).*?\[(.*?)\]', i) |
|
335
96718de2f29c
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diff
changeset
|
7370 self.assertEqual(expected, len(studyInstanceUid)) |
|
337
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7371 |
|
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7372 |
|
ec13ace43bde
trying webdav tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
335
diff
changeset
|
7373 def test_webdav(self): |
|
ec13ace43bde
trying webdav tests
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parents:
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diff
changeset
|
7374 self.assertRaises(Exception, lambda: DoPropFind(_REMOTE, '/webdav/', 2)) |
|
ec13ace43bde
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diff
changeset
|
7375 |
|
342
bf8369ea3ff1
more tests of webdav
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341
diff
changeset
|
7376 for suffix in [ '', '/' ]: |
|
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341
diff
changeset
|
7377 f = DoPropFind(_REMOTE, '/webdav' + suffix, 0) |
|
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diff
changeset
|
7378 self.assertEqual(1, len(f)) |
|
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341
diff
changeset
|
7379 self.assertTrue('/webdav/' in f.keys()) |
|
bf8369ea3ff1
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341
diff
changeset
|
7380 self.assertTrue(f['/webdav/']['folder']) |
|
bf8369ea3ff1
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diff
changeset
|
7381 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
bf8369ea3ff1
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341
diff
changeset
|
7382 |
|
bf8369ea3ff1
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341
diff
changeset
|
7383 f = DoPropFind(_REMOTE, '/webdav' + suffix, 1) |
|
bf8369ea3ff1
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diff
changeset
|
7384 self.assertEqual(6, len(f)) |
|
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341
diff
changeset
|
7385 self.assertTrue(f['/webdav/']['folder']) |
|
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341
diff
changeset
|
7386 self.assertEqual('webdav', f['/webdav/']['displayname']) |
|
bf8369ea3ff1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
7387 |
|
bf8369ea3ff1
more tests of webdav
Sebastien Jodogne <s.jodogne@gmail.com>
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341
diff
changeset
|
7388 for i in [ 'by-dates', 'by-patients', 'by-studies', 'by-uids', 'uploads' ]: |
|
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more tests of webdav
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341
diff
changeset
|
7389 self.assertTrue(f['/webdav/%s' % i]['folder']) |
|
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341
diff
changeset
|
7390 self.assertEqual(i, f['/webdav/%s' % i]['displayname']) |
|
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341
diff
changeset
|
7391 |
|
bf8369ea3ff1
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
341
diff
changeset
|
7392 for depth in [ 0, 1 ]: |
|
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341
diff
changeset
|
7393 for suffix2 in [ '', '/' ]: |
|
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341
diff
changeset
|
7394 g = DoPropFind(_REMOTE, '/webdav/%s%s' % (i, suffix2), depth) |
|
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diff
changeset
|
7395 |
|
bf8369ea3ff1
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341
diff
changeset
|
7396 if i == 'uploads': |
|
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diff
changeset
|
7397 # Empty folders might still exist in "/uploads/" |
|
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341
diff
changeset
|
7398 self.assertTrue('/webdav/uploads/' in g) |
|
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341
diff
changeset
|
7399 self.assertEqual('uploads', g['/webdav/uploads/']['displayname']) |
|
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diff
changeset
|
7400 for j in g.items(): |
|
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diff
changeset
|
7401 self.assertTrue(g.items()[0][1]['folder']) |
|
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diff
changeset
|
7402 else: |
|
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diff
changeset
|
7403 self.assertEqual(1, len(g)) |
|
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341
diff
changeset
|
7404 self.assertEqual('/webdav/%s/' % i, g.items()[0][0]) |
|
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diff
changeset
|
7405 self.assertTrue(g.items()[0][1]['folder']) |
|
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341
diff
changeset
|
7406 self.assertEqual(i, g.items()[0][1]['displayname']) |
|
341
66a36befb208
extending Toolbox.DoPropFind()
Sebastien Jodogne <s.jodogne@gmail.com>
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337
diff
changeset
|
7407 |
|
342
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diff
changeset
|
7408 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
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diff
changeset
|
7409 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
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diff
changeset
|
7410 DoPut(_REMOTE, '/webdav/uploads/dummy', f.read(), 'text/plain') |
|
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diff
changeset
|
7411 |
|
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341
diff
changeset
|
7412 while len(DoGet(_REMOTE, '/patients')) == 0: |
|
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diff
changeset
|
7413 time.sleep(0.01) |
|
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diff
changeset
|
7414 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
337
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diff
changeset
|
7415 |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
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348
diff
changeset
|
7416 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7417 def test_log_categories(self): |
| 350 | 7418 original = DoGet(_REMOTE, '/tools/log-level-http') |
|
349
698898a93a10
test_log_categories
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diff
changeset
|
7419 |
| 350 | 7420 DoPut(_REMOTE, '/tools/log-level-http', 'default') |
| 7421 self.assertEqual('default', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7422 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7423 |
| 350 | 7424 DoPut(_REMOTE, '/tools/log-level-http', 'verbose') |
| 7425 self.assertEqual('verbose', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7426 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7427 |
| 350 | 7428 DoPut(_REMOTE, '/tools/log-level-http', 'trace') |
| 7429 self.assertEqual('trace', DoGet(_REMOTE, '/tools/log-level-http')) | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7430 DoGet(_REMOTE, '/system') |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7431 |
| 350 | 7432 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-http', 'nope')) |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7433 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7434 # Switch back to the original log level |
| 350 | 7435 DoPut(_REMOTE, '/tools/log-level-http', original) |
| 7436 | |
| 7437 for c in [ 'generic', 'http', 'dicom', 'plugins', 'sqlite', 'lua', 'jobs' ]: | |
|
349
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7438 DoPut(_REMOTE, '/tools/log-level-%s' % c, DoGet(_REMOTE, '/tools/log-level-%s' % c)) |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7439 |
|
698898a93a10
test_log_categories
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
348
diff
changeset
|
7440 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/log-level-nope', 'default')) |
| 357 | 7441 |
| 7442 | |
| 7443 def test_upload_zip(self): | |
| 7444 f = StringIO() | |
| 7445 with zipfile.ZipFile(f, 'w') as z: | |
| 7446 z.writestr('hello/world/invalid.txt', 'Hello world') | |
| 7447 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as g: | |
| 7448 c = g.read() | |
| 7449 z.writestr('hello/world/dicom1.dcm', c) | |
| 7450 z.writestr('hello/world/dicom2.dcm', c) | |
| 7451 | |
| 7452 f.seek(0) | |
| 7453 i = DoPost(_REMOTE, '/instances', f.read()) | |
| 7454 | |
| 7455 self.assertEqual(2, len(i)) | |
| 7456 self.assertEqual(i[0], i[1]) | |
| 7457 self.assertEqual(6, len(i[0])) | |
| 7458 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['ID']) | |
| 7459 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', i[0]['ParentSeries']) | |
| 7460 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', i[0]['ParentStudy']) | |
| 7461 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', i[0]['ParentPatient']) | |
| 7462 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', i[0]['Path']) | |
| 7463 | |
| 7464 # Both are "Success" (instead of one "AlreadyStored"), because "OverwriteInstance" is true | |
| 7465 self.assertEqual('Success', i[0]['Status']) | |
|
361
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7466 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7467 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7468 def test_transfer_syntax_no_metaheader(self): |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7469 a = UploadInstance(_REMOTE, 'TransferSyntaxes/1.2.840.10008.1.2.dcm')['ID'] |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7470 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % a) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7471 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid']) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7472 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7473 # This fails on Orthanc <= 1.8.1 |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7474 self.assertTrue('TransferSyntax' in m) |
|
6cf5cc4d0a99
test_transfer_syntax_no_metaheader
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
359
diff
changeset
|
7475 self.assertEqual('1.2.840.10008.1.2', m['TransferSyntax']) |
|
368
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7476 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7477 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7478 def test_upload_multipart_1(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7479 # This tests the "Upload" button in Orthanc Explorer |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7480 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7481 def EncodeChunk(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7482 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7483 'Content-Disposition : form-data ; name ="files[]" ; filename = "%s" \r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7484 '\r\n%s\r\n') % (boundary, filename, data)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7485 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7486 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7487 dcm1 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7488 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7489 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7490 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7491 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7492 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7493 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7494 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7495 m = DoPost(_REMOTE, '/instances', (EncodeChunk(dcm1, boundary, 'DummyCT.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7496 EncodeChunk(dcm2, boundary, 'ColorTestMalaterre.dcm') + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7497 '--' + boundary + '--'), headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7498 'Content-Type' : 'multipart/form-data ; boundary = %s ' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7499 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7500 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7501 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7502 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7503 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7504 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7505 def test_upload_multipart_2(self): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7506 # This tests the "maxChunkSize" option of "jQuery File Upload |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7507 # 5.12", whose source code can be found in: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7508 # "OrthancServer/OrthancExplorer/libs/jquery-file-upload/" |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7509 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7510 def EncodeBody(data, boundary, filename): |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7511 return (('--%s\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7512 'Content-Disposition: form-data; name="files[]"; filename="%s"\r\n' + |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7513 '\r\n%s\r\n--%s') % (boundary, filename, data, boundary)) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7514 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7515 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7516 dcm = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7517 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7518 with open(GetDatabasePath('ColorTestMalaterre.dcm'), 'rb') as f: |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7519 dcm2 = f.read() |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7520 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7521 boundary = '----WebKitFormBoundarypJDNQqJPoXiorRmQ' |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7522 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7523 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7524 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7525 EncodeBody(dcm[0:1000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7526 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7527 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7528 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7529 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7530 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7531 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7532 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7533 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7534 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7535 EncodeBody(dcm[1000:2000], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7536 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7537 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7538 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7539 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7540 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7541 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7542 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7543 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7544 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7545 EncodeBody(dcm2, boundary, 'ColorTestMalaterre.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7546 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7547 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7548 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7549 'X-File-Name' : 'ColorTestMalaterre.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7550 'X-File-Size' : str(len(dcm2)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7551 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7552 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7553 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7554 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7555 # Upload the last chunk => the file is now entirely available |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7556 m = DoPost(_REMOTE, '/instances', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7557 EncodeBody(dcm[2000:len(dcm)], boundary, 'DummyCT.dcm'), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7558 headers = { |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7559 'Content-Type' : 'multipart/form-data; boundary=%s' % boundary, |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7560 'X-Requested-With' : 'XMLHttpRequest', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7561 'X-File-Name' : 'DummyCT.dcm', |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7562 'X-File-Size' : str(len(dcm)), |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7563 }) |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7564 |
|
2cc40121c3a8
test_upload_multipart_1 and test_upload_multipart_2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
363
diff
changeset
|
7565 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
377
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7566 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7567 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7568 def test_pixel_data_offset(self): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7569 # New in Orthanc 1.9.1 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7570 def Check(path, offset): |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7571 i = UploadInstance(_REMOTE, path) ['ID'] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7572 metadata = DoGetRaw(_REMOTE, '/instances/%s/metadata/PixelDataOffset' % i) [1] |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7573 self.assertEqual(offset, metadata) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7574 |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7575 Check('ColorTestMalaterre.dcm', str(0x03a0)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7576 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', str(0x037c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7577 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', str(0x03e8)) # Big endian |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7578 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', str(0x04ac)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7579 Check('TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm', str(0x072c)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7580 Check('TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm', str(0x0620)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7581 Check('TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm', str(0x065a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7582 Check('TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm', str(0x0b46)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7583 Check('TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm', str(0x073e)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7584 Check('TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm', str(0x0b66)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7585 Check('TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm', str(0x19b8)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7586 Check('TransferSyntaxes/1.2.840.10008.1.2.5.dcm', str(0x0b0a)) |
|
cc79fa4945da
test_pixel_data_offset
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
374
diff
changeset
|
7587 Check('TransferSyntaxes/1.2.840.10008.1.2.dcm', '') # No valid DICOM preamble |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7588 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7589 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7590 def test_peer_store_straight(self): |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7591 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7592 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports'])) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7593 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7594 peer = DoGet(_REMOTE, '/peers/peer/system') |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7595 if not IsOrthancVersionAbove(_LOCAL, 0, 8, 6): |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7596 self.assertEqual(3, len(peer)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7597 self.assertEqual(5, peer['DatabaseVersion']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7598 self.assertEqual('MyOrthanc', peer['Name']) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7599 self.assertEqual('0.8.6', peer['Version']) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7600 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7601 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7602 j = DoPost(_REMOTE, '/peers/peer/store-straight', f.read(), 'application/dicom') |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7603 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7604 # Remote server is Orthanc 0.8.6, thus "ParentPatient", |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7605 # "ParentStudy", "ParentSeries" are not reported |
|
509
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7606 if not IsOrthancVersionAbove(_LOCAL, 1, 11, 2): # don't know which specific version the behaviour changed but this fails with 0.8.6 |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7607 self.assertEqual(3, len(j)) |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7608 else: |
|
17a74118d73a
allow the tests to run with more recent LOCAL version of Orthanc (1.11.2 instead of 0.8.6)
Alain Mazy <am@osimis.io>
parents:
508
diff
changeset
|
7609 self.assertEqual(6, len(j)) |
|
382
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7610 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['ID']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7611 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', j['Path']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7612 self.assertEqual('Success', j['Status']) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7613 |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7614 self.assertEqual(1, len(DoGet(_LOCAL, '/patients'))) |
|
a8dd562943a7
added test_peer_store_straight
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
380
diff
changeset
|
7615 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
| 383 | 7616 |
| 7617 | |
| 7618 def test_cp246(self): | |
| 7619 # This fails on Orthanc <= 1.9.0 | |
| 7620 a = UploadInstance(_REMOTE, '2021-02-19-MalaterreCP246.dcm')['ID'] | |
| 7621 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) | |
| 7622 | |
| 7623 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % a) | |
| 7624 self.assertEqual('1.2.840.10008.5.1.4.1.1.128', tags['0008,0016']) | |
| 7625 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517715415141633', tags['0008,0018']) | |
| 7626 self.assertEqual('1.2.840.113745.101000.1008000.38179.6792.6324567', tags['0020,000d']) | |
| 7627 self.assertEqual('1.3.12.2.1107.5.1.4.36085.2.0.517714246252254', tags['0020,000e']) | |
| 7628 | |
| 7629 study = DoGet(_REMOTE, '/instances/%s/study' % a) | |
| 7630 self.assertEqual(tags['0020,000d'], study['MainDicomTags']['StudyInstanceUID']) | |
| 7631 | |
| 7632 series = DoGet(_REMOTE, '/instances/%s/series' % a) | |
| 7633 self.assertEqual(tags['0020,000e'], series['MainDicomTags']['SeriesInstanceUID']) | |
| 7634 | |
| 7635 instance = DoGet(_REMOTE, '/instances/%s' % a) | |
| 7636 self.assertEqual(tags['0008,0018'], instance['MainDicomTags']['SOPInstanceUID']) | |
| 7637 | |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7638 |
|
392
5cbcb4a83b41
fix for revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
391
diff
changeset
|
7639 def test_revisions_metadata(self): |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7640 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7641 # was introduced in 1.9.2), or if configuration option |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7642 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7643 # related to revisions mimic CouchDB: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7644 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7645 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7646 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7647 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7648 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7649 self.assertEqual('"0-%s"' % ComputeMD5('1.2.840.10008.1.2.4.70'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7650 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7651 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7652 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7653 'If-None-Match' : '"aaa"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7654 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7655 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7656 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7657 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7658 'If-None-Match' : '"aaa-bbb"' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7659 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7660 self.assertEqual('400', headers['status']) # Bad header format |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7661 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7662 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7663 'If-None-Match' : '"0-16de4d7060d0b9d102ef0fca8acc892a"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7664 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7665 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7666 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7667 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7668 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7669 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7670 'If-None-Match' : '"1-16de4d7060d0b9d102ef0fca8acc892a"' # Bad revision, good MD5 |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7671 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7672 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7673 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7674 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7675 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7676 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7677 'If-None-Match' : '"0-aaa"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7678 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7679 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7680 self.assertEqual('"0-16de4d7060d0b9d102ef0fca8acc892a"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7681 self.assertEqual('1.2.840.10008.1.2.4.70', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7682 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7683 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7684 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7685 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7686 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7687 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7688 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7689 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7690 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7691 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7692 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7693 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7694 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7695 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7696 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7697 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7698 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7699 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7700 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7701 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7702 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7703 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7704 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7705 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7706 'If-None-Match' : '"1-tata"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7707 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7708 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7709 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7710 self.assertEqual('hello', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7711 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7712 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7713 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7714 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7715 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7716 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7717 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7718 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7719 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7720 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7721 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7722 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7723 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7724 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7725 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7726 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7727 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7728 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7729 self.assertEqual('200', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7730 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7731 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7732 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7733 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7734 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7735 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7736 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7737 self.assertEqual('404', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7738 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7739 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7740 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7741 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7742 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7743 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7744 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7745 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7746 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7747 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7748 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7749 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7750 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7751 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7752 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7753 self.assertEqual('', body) # Body must be empty on 304 status |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7754 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7755 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7756 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7757 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7758 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7759 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7760 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7761 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7762 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/metadata/1024' % i, headers = { |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7763 'If-None-Match' : headers['etag'] |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7764 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7765 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7766 if headers['status'] == '200': |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7767 print("Your database backend doesn't store revisions") |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7768 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7769 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7770 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7771 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7772 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7773 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7774 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7775 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7776 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7777 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7778 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7779 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7780 elif headers['status'] == '304': # Revisions are supported |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7781 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7782 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7783 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7784 self.assertEqual('409', headers['status']) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7785 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7786 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/metadata/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7787 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7788 }) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7789 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7790 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
391
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7791 self.assertEqual('', body) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7792 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7793 else: |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7794 raise Exception('Internal error') |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7795 |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7796 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/metadata/1024' % i)) |
|
227d9a932467
testing revisions in metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
390
diff
changeset
|
7797 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7798 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7799 def test_revisions_attachments(self): |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7800 # This test fails on Orthanc <= 1.9.1 (support for revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7801 # was introduced in 1.9.2), or if configuration option |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7802 # "CheckRevisions" is "False". Conventions for HTTP headers |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7803 # related to revisions mimic CouchDB: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7804 # https://docs.couchdb.org/en/stable/api/document/common.html |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7805 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7806 |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7807 with open(GetDatabasePath('DummyCT.dcm'), 'rb') as f: |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7808 md5 = ComputeMD5(f.read()) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7809 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7810 # "/compress", "/uncompress" and "/verify-md5" are POST |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7811 # methods, and are not affected by revisions |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7812 for suffix in [ '', '/compressed-data', '/compressed-md5', '/compressed-size', |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7813 '/data', '/is-compressed', '/md5', '/size' ]: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7814 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7815 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7816 self.assertEqual('"0-%s"' % md5, headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7817 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7818 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7819 'If-None-Match' : '"0-3e29b869978b6db4886355a2b1132124"', |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7820 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7821 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7822 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7823 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7824 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7825 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7826 'If-None-Match' : '"tata"', # Invalid header |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7827 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7828 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7829 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7830 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7831 'If-None-Match' : '"1-%s"' % md5, # Bad revision, good MD5 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7832 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7833 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7834 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7835 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7836 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom/%s' % (i, suffix), headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7837 'If-None-Match' : '"0-tata"' # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7838 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7839 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7840 self.assertEqual('"0-3e29b869978b6db4886355a2b1132124"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7841 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7842 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/dicom' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7843 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7844 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7845 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/dicom' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7846 self.assertEqual('403', headers['status']) # Forbidden (system metadata) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7847 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7848 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7849 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7850 self.assertEqual('"0-%s"' % ComputeMD5('hello'), headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7851 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7852 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7853 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7854 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7855 self.assertEqual('hello', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7856 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7857 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7858 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7859 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7860 self.assertEqual('304', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7861 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7862 self.assertEqual('', body) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7863 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7864 for h in [ '"1-5d41402abc4b2a76b9719d911017c592"', # Bad revision, good MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7865 '"0-tata"']: # Good revision, bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7866 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7867 'If-None-Match' : h |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7868 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7869 self.assertEqual('200', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7870 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7871 self.assertEqual('hello', body) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7872 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7873 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7874 'If-None-Match' : 'tata' # Bad header format |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7875 }) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7876 self.assertEqual('400', headers['status']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7877 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7878 |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7879 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7880 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7881 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7882 self.assertEqual('409', headers['status']) # No revision given, but "CheckRevisions" is True |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7883 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7884 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7885 'If-Match' : '45-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7886 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7887 self.assertEqual('409', headers['status']) # Conflict, as bad revision |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7888 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7889 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7890 'If-Match' : '0-tata' |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7891 }) |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7892 self.assertEqual('409', headers['status']) # Conflict, as bad MD5 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7893 |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7894 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7895 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7896 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7897 self.assertEqual('200', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7898 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7899 (headers, body) = DoDeleteRaw(_REMOTE, '/instances/%s/attachments/1024' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7900 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7901 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7902 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7903 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7904 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7905 self.assertEqual('404', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7906 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7907 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/1024' % i)) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7908 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7909 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7910 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7911 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7912 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7913 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7914 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7915 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7916 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7917 'If-None-Match' : '"0-5d41402abc4b2a76b9719d911017c592"' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7918 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7919 self.assertEqual('304', headers['status']) # Not modified |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7920 self.assertEqual('"0-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7921 self.assertEqual('', body) # Body must be empty on 304 status |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7922 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7923 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7924 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7925 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7926 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7927 self.assertEqual('"1-5d41402abc4b2a76b9719d911017c592"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7928 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7929 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7930 (headers, body) = DoGetRaw(_REMOTE, '/instances/%s/attachments/1024/data' % i, headers = { |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7931 'If-None-Match' : headers['etag'] |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7932 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7933 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7934 if headers['status'] == '200': |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7935 print("Your database backend doesn't store revisions") |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7936 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7937 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7938 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7939 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7940 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7941 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7942 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7943 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7944 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7945 self.assertEqual('"1-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7946 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7947 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7948 elif headers['status'] == '304': # Revisions are supported |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7949 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7950 'If-Match' : '0-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7951 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7952 self.assertEqual('409', headers['status']) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7953 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7954 (headers, body) = DoPutRaw(_REMOTE, '/instances/%s/attachments/1024' % i, 'hello2', headers = { |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7955 'If-Match' : '1-5d41402abc4b2a76b9719d911017c592' |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7956 }) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7957 self.assertEqual('200', headers['status']) |
|
397
eb87ec525b53
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
394
diff
changeset
|
7958 self.assertEqual('"2-6e809cbda0732ac4845916a59016f954"', headers['etag']) |
|
393
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7959 self.assertEqual('{}', body) |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7960 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7961 else: |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7962 raise Exception('Internal error') |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7963 |
|
3019306499c5
test_revisions_attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
392
diff
changeset
|
7964 self.assertEqual('hello2', DoGet(_REMOTE, '/instances/%s/attachments/1024/data' % i)) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7965 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7966 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7967 def test_issue_195(self): |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7968 # This fails on Orthanc <= 1.9.2 |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
7969 # https://bugs.orthanc-server.com/show_bug.cgi?id=195 |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7970 a = UploadInstance(_REMOTE, 'Issue195.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7971 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7972 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7973 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7974 # The expected result can be found by typing "dcm2json Database/Issue195.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7975 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7976 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7977 self.assertEqual("UI", b["00080018"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7978 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.13188.1620309604.848735", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7979 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7980 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7981 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7982 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7983 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.13188.1620309604.848733", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7984 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7985 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7986 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7987 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7988 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.13188.1620309604.848734", |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7989 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7990 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7991 self.assertEqual(1, len(b["00081030"])) # Case of an empty value |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7992 self.assertEqual("LO", b["00081030"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7993 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7994 self.assertEqual(2, len(b["0008103E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7995 self.assertEqual("LO", b["0008103E"]["vr"]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7996 self.assertEqual("Hello1", b["0008103E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7997 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7998 a = UploadInstance(_REMOTE, 'Issue195-bis.dcm')['ID'] |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
7999 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8000 headers = { 'Accept' : 'application/dicom+json' }) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8001 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8002 # The expected result can be found by typing "dcm2json Database/Issue195-bis.dcm" |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8003 self.assertEqual(5, len(b)) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8004 self.assertEqual(2, len(b["00080018"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8005 self.assertEqual("UI", b["00080018"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8006 self.assertEqual("1.2.276.0.7230010.3.1.4.8323329.6792.1625504071.652470", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8007 b["00080018"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8008 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8009 self.assertEqual(2, len(b["0020000D"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8010 self.assertEqual("UI", b["0020000D"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8011 self.assertEqual("1.2.276.0.7230010.3.1.2.8323329.6792.1625504071.652468", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8012 b["0020000D"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8013 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8014 self.assertEqual(2, len(b["0020000E"])) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8015 self.assertEqual("UI", b["0020000E"]["vr"]) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8016 self.assertEqual("1.2.276.0.7230010.3.1.3.8323329.6792.1625504071.652469", |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8017 b["0020000E"]["Value"][0]) |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8018 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8019 self.assertEqual(2, len(b["00084567"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8020 self.assertEqual("UN", b["00084567"]["vr"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8021 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8022 # NB: "QgA=" corresponds to the base64 encoding of (uint16_t) 0x42 in little endian: |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8023 # $ echo -n 'QgA=' | base64 -d | hexdump -C |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8024 self.assertEqual("QgA=", b["00084567"]["InlineBinary"]) |
|
399
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8025 |
|
dd519677974d
integration tests for issue 195
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
397
diff
changeset
|
8026 # Case of an empty value, fails in Orthanc <= 1.9.2 because of issue #195 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8027 self.assertEqual(1, len(b["00084565"])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8028 self.assertEqual("UN", b["00084565"]["vr"]) |
|
402
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8029 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8030 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8031 def test_modify_attribute(self): |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8032 # This fails on Orthanc <= 1.9.3 (not implemented) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8033 # https://groups.google.com/g/orthanc-users/c/1pzCqT-ByXg/m/VyIGK5i5BgAJ |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8034 i = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8035 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8036 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % i) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8037 self.assertFalse('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8038 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8039 i = DoPost(_REMOTE, '/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0/modify', { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8040 "Replace": { |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8041 "0020,9165": "0020,9056", |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8042 } |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8043 }) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8044 instances = DoGet(_REMOTE, '/studies/%s/instances' % i['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8045 self.assertEqual(1, len(instances)) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8046 |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8047 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8048 self.assertTrue('0020,9165' in tags) |
|
cc947ddc57c5
test_modify_attribute
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
399
diff
changeset
|
8049 self.assertEqual('0020,9056', tags['0020,9165']) |
| 405 | 8050 |
| 8051 | |
| 8052 def test_issue_146(self): | |
| 8053 # "Update Anonyization to 2019c" | |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
8054 # https://bugs.orthanc-server.com/show_bug.cgi?id=146 |
| 405 | 8055 |
| 8056 def GetTags(study, params): | |
| 8057 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, params) ['ID'] | |
| 8058 b = DoGet(_REMOTE, '/studies/%s/instances' % a) | |
| 8059 self.assertEqual(1, len(b)) | |
| 8060 return DoGet(_REMOTE, '/instances/%s/tags?short' % b[0]['ID']) | |
| 8061 | |
| 8062 | |
| 8063 UploadInstance(_REMOTE, 'Issue146.dcm') | |
| 8064 study = '7c950970-321e4ab0-28446c5f-f94850f1-5c44634b' | |
| 8065 | |
| 8066 self.assertRaises(Exception, lambda: GetTags(study, { 'DicomVersion' : 'nope' })) | |
| 8067 | |
| 8068 tags2008 = GetTags(study, { 'DicomVersion' : '2008' }) | |
| 8069 tags2017c = GetTags(study, { 'DicomVersion' : '2017c' }) | |
| 8070 tags2021b = GetTags(study, { 'DicomVersion' : '2021b' }) | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8071 tags2023b = GetTags(study, { 'DicomVersion' : '2023b' }) |
| 405 | 8072 tagsDefault = GetTags(study, {}) |
| 8073 | |
| 420 | 8074 orthancVersion = DoGet(_REMOTE, '/system') ['Version'] |
| 8075 self.assertEqual('Orthanc %s - PS 3.15-2008 Table E.1-1' % orthancVersion, tags2008['0012,0063']) | |
| 8076 self.assertEqual('Orthanc %s - PS 3.15-2017c Table E.1-1 Basic Profile' % orthancVersion, tags2017c['0012,0063']) | |
| 8077 self.assertEqual('Orthanc %s - PS 3.15-2021b Table E.1-1 Basic Profile' % orthancVersion, tags2021b['0012,0063']) | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8078 self.assertEqual('Orthanc %s - PS 3.15-2023b Table E.1-1 Basic Profile' % orthancVersion, tags2023b['0012,0063']) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8079 self.assertEqual(tagsDefault['0012,0063'], tags2023b['0012,0063']) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8080 |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8081 self.assertEqual(len(tags2021b), len(tags2023b)) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8082 self.assertNotEqual(tags2021b, tags2023b) |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8083 |
|
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8084 for t in [ tags2008, tags2017c, tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8085 self.assertTrue(t['0010,0010'].startswith('Anonymized')) |
| 8086 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', t['0008,0016']) | |
| 8087 self.assertEqual(36, len(t['0010,0020'])) # Length of a UUID | |
| 8088 self.assertEqual('YES', t['0012,0062']) | |
| 8089 | |
| 8090 for t in [ tags2008 ]: | |
| 8091 self.assertEqual('20200101', t['0008,0020']) | |
| 8092 | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8093 for t in [ tags2017c, tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8094 self.assertEqual('', t['0008,0020']) # Study Date, anonymized between 2008 and 2017c |
| 8095 | |
| 8096 for t in [ tags2008, tags2017c ]: | |
| 8097 self.assertEqual('HELLO^C', t['0050,0020']) | |
| 8098 self.assertEqual('HELLO^D', t['3006,0002']) | |
| 8099 | |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8100 for t in [ tags2021b, tags2023b, tagsDefault ]: |
| 405 | 8101 self.assertFalse('0050,0020' in t) # Device Description, anonymized between 2017c and 2019c |
| 8102 self.assertEqual('', t['3006,0002']) # StructureSetLabel, anonymized between 2019c and 2021b | |
|
406
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8103 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8104 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8105 def test_anonymize_relationships_6(self): |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8106 # 2020-10-20 (Salim Kanoun): "I think I have hit an |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8107 # anonymization issue for the tag 0008,1250. This tags is a |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8108 # sequence containing StudyUID / Series UID of related series. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8109 # [After anonymization,] this tag keep a reference of the |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8110 # original Study/Series UID. |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8111 # https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8112 UploadInstance(_REMOTE, '2020-11-16-SalimKanounAnonymization.dcm') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8113 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8114 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % DoGet(_REMOTE, '/instances') [0]) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8115 self.assertEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8116 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8117 self.assertEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8118 tags['0008,1250'][0]['0020,000e']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8119 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8120 a = DoGet(_REMOTE, '/studies') |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8121 self.assertEqual(1, len(a)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8122 b = DoPost(_REMOTE, '/studies/%s/anonymize' % a[0], {}) ['ID'] |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8123 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8124 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8125 self.assertEqual(1, len(c)) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8126 tags = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8127 |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8128 # In Orthanc <= 1.9.3, the two tests below failed |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8129 self.assertNotEqual('1.2.840.113619.6.95.31.0.3.4.1.3175.13.6054282', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8130 tags['0008,1250'][0]['0020,000d']) |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8131 self.assertNotEqual('1.3.12.2.1107.5.1.4.11047.30000019111306043635400005028', |
|
62ee5e57ee05
test_anonymize_relationships_6
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
405
diff
changeset
|
8132 tags['0008,1250'][0]['0020,000e']) |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8133 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8134 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8135 def test_modify_subsequences(self): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8136 # New in Orthanc 1.9.4 (cf. LSD-629) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8137 UploadInstance(_REMOTE, 'Issue22-NoPixelData.dcm') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8138 studies = DoGet(_REMOTE, '/studies') |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8139 self.assertEqual(1, len(studies)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8140 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8141 def GetTags(study): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8142 instances = DoGet(_REMOTE, '/studies/%s/instances' % study) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8143 self.assertEqual(1, len(instances)) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8144 return DoGet(_REMOTE, '/instances/%s/tags?short' % instances[0]['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8145 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8146 tags1 = GetTags(studies[0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8147 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8148 a = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8149 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8150 'PatientName' : 'Hello1', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8151 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello2', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8152 'DimensionIndexSequence[*].PatientName' : 'Hello3', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8153 'ReferencedImageEvidenceSequence[2].ReferencedSeriesSequence[0].ReferencedSOPSequence[0].ReferencedSOPInstanceUID' : 'Hello4', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8154 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8155 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8156 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8157 'ReferencedPerformedProcedureStepSequence', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8158 'PerformedProtocolCodeSequence[0].CodeValue', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8159 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8160 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[1].ReferencedSOPClassUID', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8161 'SharedFunctionalGroupsSequence[2].ReferencedImageSequence', # Inexistent tag |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8162 ] |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8163 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8164 tags2 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8165 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8166 self.assertEqual('Anonymized1', tags1['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8167 self.assertEqual('Hello1', tags2['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8168 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8169 self.assertEqual('Stack ID', tags1['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8170 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8171 self.assertEqual('Stack ID', tags2['0020,9222'][0]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8172 self.assertEqual('Hello2', tags2['0020,9222'][1]['0020,9421']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8173 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8174 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8175 self.assertFalse('0010,0010' in tags1['0020,9222'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8176 self.assertEqual('Hello3', tags2['0020,9222'][i]['0010,0010']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8177 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8178 self.assertEqual('1.3.46.670589.11.22237.5.20.1.1.7512.2014100814064168452', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8179 tags1['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8180 self.assertEqual('Hello4', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8181 tags2['0008,9092'][2]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8182 self.assertEqual(tags1['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8183 tags2['0008,9092'][1]['0008,1115'][0]['0008,1199'][0]['0008,1155']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8184 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8185 self.assertTrue('0008,1111' in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8186 self.assertFalse('0008,1111' in tags2) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8187 self.assertTrue('0008,0100' in tags1['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8188 self.assertFalse('0008,0100' in tags2['0040,0260'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8189 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8190 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8191 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8192 self.assertFalse('0008,1155' in tags2['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8193 self.assertTrue('0008,1150' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8194 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8195 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][0]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8196 self.assertFalse('0008,1150' in tags2['5200,9229'][0]['0008,1140'][1]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8197 self.assertTrue('0008,1150' in tags2['5200,9229'][0]['0008,1140'][2]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8198 |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8199 self.assertEqual('1.3.46.670589.11.22237.5.0.11272.2014100816243076000', |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8200 tags1['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8201 self.assertEqual('1.2.3.4', tags2['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8202 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8203 a = DoPost(_REMOTE, '/studies/%s/anonymize' % studies[0], { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8204 'Replace' : { |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8205 'DimensionIndexSequence[1].DimensionDescriptionLabel' : 'Hello1', |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8206 'DimensionOrganizationSequence[0].DimensionOrganizationUID' : '1.2.3.4', |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8207 }, |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8208 'Remove' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8209 'SharedFunctionalGroupsSequence[*].ReferencedImageSequence[*].ReferencedSOPInstanceUID', # 5200,9229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8210 ], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8211 'Keep' : [ |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8212 'ReferencedImageEvidenceSequence', # 0008,9092 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8213 'DimensionIndexSequence', # 0020,9222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8214 'PerFrameFunctionalGroupsSequence[*].2005,140f[*].SOPInstanceUID', # 5200,9230 |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8215 '(5200,9230)[*].2005,140f[*].(0008,0023)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8216 '(5200,9230)[*].2005,140f[*].(0008,0033)', # Compatibility with Orthanc 1.9.4 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8217 ], |
|
557
1cdb14a679f2
fix anonymization tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
556
diff
changeset
|
8218 'DicomVersion' : '2021b', |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8219 'KeepPrivateTags' : True # Compatibility with Orthanc 1.9.4 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8220 }) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8221 tags3 = GetTags(a['ID']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8222 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8223 # UIDs |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8224 for i in [ '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8225 '0010,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8226 '0008,0018', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8227 '0010,0020' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8228 self.assertNotEqual(tags1[i], tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8229 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8230 self.assertNotEqual(tags1['0020,9221'][0]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8231 tags3['0020,9221'][0]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8232 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8233 self.assertNotEqual(tags1['5200,9229'][0]['2005,140e'][0]['0008,0014'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8234 tags3['5200,9229'][0]['2005,140e'][0]['0008,0014']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8235 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8236 # http://dicom.nema.org/medical/dicom/current/output/chtml/part15/chapter_E.html#table_E.1-1 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8237 # Removals (X) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8238 for i in [ '0008,0021', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8239 '0008,002a', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8240 '0008,0031', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8241 '0008,1030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8242 '0008,103e', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8243 '0008,1111', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8244 '0010,21c0', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8245 '0040,0006', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8246 '0040,0241', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8247 '0040,0244', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8248 '0040,0245', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8249 '0040,0250', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8250 '0040,0251', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8251 '0040,0253', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8252 '0040,0254', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8253 '0040,0555', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8254 ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8255 self.assertTrue(i in tags1) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8256 self.assertFalse(i in tags3) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8257 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8258 # Clearings (Z) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8259 for i in [ '0008,0020', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8260 '0008,0023', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8261 '0008,0030', |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8262 '0008,0033' ]: |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8263 self.assertNotEqual('', tags1[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8264 self.assertEqual('', tags3[i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8265 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8266 # Replace |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8267 self.assertEqual('In-Stack Position Number', tags1['0020,9222'][1]['0020,9421']) |
|
408
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8268 self.assertEqual('Hello1', tags3['0020,9222'][1]['0020,9421']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8269 self.assertEqual('1.2.3.4', tags3['0020,9221'][0]['0020,9164']) |
|
4e0b9fddbc71
test "Replace" for UID in subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
407
diff
changeset
|
8270 |
|
407
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8271 # "Keep" on DimensionIndexSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8272 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8273 self.assertEqual(tags1['0020,9222'][i]['0020,9164'], |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8274 tags3['0020,9222'][i]['0020,9164']) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8275 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8276 # "Keep" on ReferencedImageEvidenceSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8277 self.assertEqual(json.dumps(tags1['0008,9092']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8278 json.dumps(tags3['0008,9092'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8279 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8280 # "Keep" on PerFrameFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8281 self.assertEqual(json.dumps(tags1['5200,9230']), |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8282 json.dumps(tags3['5200,9230'])) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8283 |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8284 # "Remove" on SharedFunctionalGroupsSequence |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8285 for i in range(3): |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8286 self.assertTrue('0008,1155' in tags1['5200,9229'][0]['0008,1140'][i]) |
|
ad98466353c6
test_modify_subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
406
diff
changeset
|
8287 self.assertFalse('0008,1155' in tags3['5200,9229'][0]['0008,1140'][i]) |
| 410 | 8288 |
| 8289 | |
| 8290 def test_bulk_modify(self): | |
| 8291 # New in Orthanc 1.9.4 | |
| 8292 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8293 def GetModified(lst, resourceType, expectedCount = None): |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8294 m = map(lambda x: x['ID'], filter(lambda x: x['Type'] == resourceType, lst['Resources'])) |
| 410 | 8295 if expectedCount != None: |
| 8296 self.assertEqual(expectedCount, len(m)) | |
| 8297 return m | |
| 8298 | |
| 8299 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 8300 series = DoGet(_REMOTE, '/series') [0] | |
| 8301 study = DoGet(_REMOTE, '/studies') [0] | |
| 8302 patient = DoGet(_REMOTE, '/patients') [0] | |
| 8303 | |
| 8304 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 8305 'Resources' : [ instance ] | |
| 8306 }) | |
| 8307 | |
| 8308 self.assertNotEqual(instance, GetModified(a, 'Instance', 1) [0]) | |
| 8309 self.assertEqual(series, GetModified(a, 'Series', 1) [0]) | |
| 8310 self.assertEqual(study, GetModified(a, 'Study', 1) [0]) | |
| 8311 self.assertEqual(patient, GetModified(a, 'Patient', 1) [0]) | |
| 8312 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8313 b = DoPost(_REMOTE, '/tools/bulk-anonymize', { |
| 410 | 8314 'Resources' : [ instance ] |
| 8315 }) | |
| 8316 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8317 self.assertNotEqual(instance, GetModified(b, 'Instance', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8318 self.assertNotEqual(series, GetModified(b, 'Series', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8319 self.assertNotEqual(study, GetModified(b, 'Study', 1) [0]) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8320 self.assertNotEqual(patient, GetModified(b, 'Patient', 1) [0]) |
| 410 | 8321 |
| 8322 self.assertEqual(3, len(DoGet(_REMOTE, '/instances'))) | |
| 8323 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) | |
| 8324 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) | |
| 8325 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8326 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8327 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8328 'Resources' : GetModified(b, 'Patient', 1) + GetModified(a, 'Instance', 1) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8329 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8330 |
| 410 | 8331 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
| 8332 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8333 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8334 | |
| 8335 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) | |
| 8336 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 8337 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 8338 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 8339 | |
| 8340 a = DoPost(_REMOTE, '/tools/bulk-modify', { | |
| 8341 'Resources' : [ knee1, brainix ] | |
| 8342 }) | |
| 8343 | |
| 8344 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 8345 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) | |
| 8346 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) | |
| 8347 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) | |
| 8348 | |
| 8349 for i in GetModified(a, 'Instance', 2): | |
| 8350 self.assertTrue(not i in [ instance, knee1, knee2, brainix ]) | |
| 8351 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/ModifiedFrom' % i) in [ knee1, brainix ]) | |
| 8352 | |
| 8353 b = GetModified(a, 'Series', 2) | |
| 8354 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % knee1) ['ID'] in b) | |
| 8355 self.assertTrue(DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] in b) | |
| 8356 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID'] in b) | |
| 8357 self.assertFalse(DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] in b) | |
| 8358 | |
| 8359 b = GetModified(a, 'Study', 2) | |
| 8360 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'] in b) | |
| 8361 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] in b) | |
| 8362 self.assertTrue(DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID'] in b) | |
| 8363 self.assertFalse(DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] in b) | |
| 8364 | |
| 8365 b = GetModified(a, 'Patient', 2) | |
| 8366 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'] in b) | |
| 8367 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'] in b) | |
| 8368 self.assertTrue(DoGet(_REMOTE, '/instances/%s/patient' % knee2) ['ID'] in b) | |
| 8369 self.assertFalse(DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] in b) | |
| 8370 | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8371 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8372 'Resources' : GetModified(a, 'Instance', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8373 }) |
| 410 | 8374 |
| 8375 sourceInstances = DoGet(_REMOTE, '/instances') | |
| 8376 sourceSeries = DoGet(_REMOTE, '/series') | |
| 8377 sourceStudies = DoGet(_REMOTE, '/studies') | |
| 8378 sourcePatients = DoGet(_REMOTE, '/patients') | |
| 8379 self.assertEqual(4, len(sourceInstances)) | |
| 8380 self.assertEqual(4, len(sourceSeries)) | |
| 8381 self.assertEqual(3, len(sourceStudies)) | |
| 8382 self.assertEqual(3, len(sourcePatients)) | |
| 8383 | |
| 8384 a = DoPost(_REMOTE, '/tools/bulk-anonymize', { | |
| 8385 'Resources' : [ knee1, brainix ] | |
| 8386 }) | |
| 8387 | |
| 8388 self.assertEqual(6, len(DoGet(_REMOTE, '/instances'))) | |
| 8389 self.assertEqual(6, len(DoGet(_REMOTE, '/series'))) | |
| 8390 self.assertEqual(5, len(DoGet(_REMOTE, '/studies'))) | |
| 8391 self.assertEqual(5, len(DoGet(_REMOTE, '/patients'))) | |
| 8392 | |
| 8393 for i in GetModified(a, 'Instance', 2): | |
| 8394 self.assertFalse(i in sourceInstances) | |
| 8395 self.assertTrue(DoGet(_REMOTE, '/instances/%s/metadata/AnonymizedFrom' % i) in [ knee1, brainix ]) | |
| 8396 | |
| 8397 for i in GetModified(a, 'Series', 2): | |
| 8398 self.assertFalse(i in sourceSeries) | |
| 8399 self.assertTrue(DoGet(_REMOTE, '/series/%s/metadata/AnonymizedFrom' % i) in sourceSeries) | |
| 8400 | |
| 8401 for i in GetModified(a, 'Study', 2): | |
| 8402 self.assertFalse(i in sourceStudies) | |
| 8403 self.assertTrue(DoGet(_REMOTE, '/studies/%s/metadata/AnonymizedFrom' % i) in sourceStudies) | |
| 8404 | |
| 8405 for i in GetModified(a, 'Patient', 2): | |
| 8406 self.assertFalse(i in sourcePatients) | |
| 8407 self.assertTrue(DoGet(_REMOTE, '/patients/%s/metadata/AnonymizedFrom' % i) in sourcePatients) | |
|
411
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8408 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8409 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8410 'Resources' : GetModified(a, 'Patient', 2) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8411 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8412 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8413 self.assertEqual(4, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8414 self.assertEqual(4, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8415 self.assertEqual(3, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8416 self.assertEqual(3, len(DoGet(_REMOTE, '/patients'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8417 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8418 DoPost(_REMOTE, '/tools/bulk-delete', { |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8419 'Resources' : [ instance, |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8420 DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8421 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'] ] |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8422 }) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8423 |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8424 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8425 self.assertEqual(0, len(DoGet(_REMOTE, '/series'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8426 self.assertEqual(0, len(DoGet(_REMOTE, '/studies'))) |
|
8cf866641fa7
testing bulk deletion
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
410
diff
changeset
|
8427 self.assertEqual(0, len(DoGet(_REMOTE, '/patients'))) |
|
412
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8428 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8429 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8430 def test_dicom_to_json_format(self): |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8431 # Test new output formats for DICOM tags introduced in 1.9.4 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8432 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8433 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8434 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8435 series = DoGet(_REMOTE, '/instances/%s/series' % instance) ['ID'] |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8436 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8437 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8438 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instance) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8439 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?short' % instance) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8440 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8441 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8442 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/tags?full' % instance) ['0010,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8443 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8444 # Test "GetInstanceHeader()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8445 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8446 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % instance) ['TransferSyntaxUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8447 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % instance) ['0002,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8448 self.assertEqual('TransferSyntaxUID', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8449 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8450 self.assertEqual('String', DoGet(_REMOTE, '/instances/%s/header?full' % instance) ['0002,0010']['Type']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8451 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8452 # Test "ListResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8453 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand') [0]['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
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411
diff
changeset
|
8454 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&short') [0]['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8455 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8456 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients?expand&full') [0]['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8457 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8458 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand') [0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8459 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&short') [0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8460 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8461 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies?expand&full') [0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8462 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8463 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand') [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8464 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&short') [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8465 self.assertEqual('20070101', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8466 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies?expand&full') [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8467 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8468 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand') [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8469 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&short') [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8470 self.assertEqual('20070101', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8471 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series?expand&full') [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8472 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8473 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand') [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8474 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&short') [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8475 self.assertEqual('20070101', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8476 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances?expand&full') [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8477 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8478 # Test "GetSingleResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8479 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s' % patient) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8480 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?short' % patient) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8481 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8482 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s?full' % patient) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8483 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8484 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s' % study) ['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8485 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?short' % study) ['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8486 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8487 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s?full' % study) ['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8488 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8489 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s' % study) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8490 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?short' % study) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8491 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8492 self.assertEqual('StudyDate', DoGet(_REMOTE, '/studies/%s?full' % study) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8493 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8494 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s' % series) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8495 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?short' % series) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8496 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8497 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/series/%s?full' % series) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8498 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8499 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s' % instance) ['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8500 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?short' % instance) ['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8501 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8502 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/instances/%s?full' % instance) ['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8503 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8504 # Test "Find()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8505 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8506 self.assertEqual('20070101', a[0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8507 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8508 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8509 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Short' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8510 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8511 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8512 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8513 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : {}, 'Expand' : True, 'Full' : True }) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8514 self.assertEqual('20070101', a[0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8515 self.assertEqual('KNIX', a[0]['PatientMainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8516 self.assertEqual('StudyDate', a[0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8517 self.assertEqual('PatientName', a[0]['PatientMainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8518 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8519 # Test "GetChildResources()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8520 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies' % patient) [0]['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8521 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?short' % patient) [0]['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8522 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8523 self.assertEqual('StudyDate', DoGet(_REMOTE, '/patients/%s/studies?full' % patient) [0]['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8524 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8525 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series' % patient) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8526 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?short' % patient) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8527 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8528 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/patients/%s/series?full' % patient) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8529 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8530 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances' % patient) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8531 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?short' % patient) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8532 self.assertEqual('20070101', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8533 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/patients/%s/instances?full' % patient) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8534 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8535 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series' % study) [0]['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8536 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?short' % study) [0]['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8537 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8538 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/studies/%s/series?full' % study) [0]['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8539 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8540 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances' % study) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8541 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?short' % study) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8542 self.assertEqual('20070101', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8543 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/studies/%s/instances?full' % study) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8544 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8545 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances' % series) [0]['MainDicomTags']['InstanceCreationDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8546 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?short' % series) [0]['MainDicomTags']['0008,0012']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8547 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8548 self.assertEqual('InstanceCreationDate', DoGet(_REMOTE, '/series/%s/instances?full' % series) [0]['MainDicomTags']['0008,0012']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8549 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8550 # Test "GetParentResource()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8551 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient' % instance) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8552 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?short' % instance) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8553 self.assertEqual('KNIX', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8554 self.assertEqual('PatientName', DoGet(_REMOTE, '/instances/%s/patient?full' % instance) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8555 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8556 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study' % instance) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8557 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?short' % instance) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8558 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8559 self.assertEqual('StudyDate', DoGet(_REMOTE, '/instances/%s/study?full' % instance) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8560 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8561 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series' % instance) ['MainDicomTags']['SeriesDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8562 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?short' % instance) ['MainDicomTags']['0008,0021']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8563 self.assertEqual('20070101', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8564 self.assertEqual('SeriesDate', DoGet(_REMOTE, '/instances/%s/series?full' % instance) ['MainDicomTags']['0008,0021']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8565 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8566 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient' % series) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8567 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?short' % series) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8568 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8569 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/patient?full' % series) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8570 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8571 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study' % series) ['MainDicomTags']['StudyDate']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8572 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?short' % series) ['MainDicomTags']['0008,0020']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8573 self.assertEqual('20070101', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8574 self.assertEqual('StudyDate', DoGet(_REMOTE, '/series/%s/study?full' % series) ['MainDicomTags']['0008,0020']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8575 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8576 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient' % study) ['MainDicomTags']['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8577 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?short' % study) ['MainDicomTags']['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8578 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8579 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/patient?full' % study) ['MainDicomTags']['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8580 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8581 # Test "GetChildInstancesTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8582 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % patient) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8583 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags?short' % patient) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8584 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8585 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/instances-tags' % patient) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8586 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8587 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?simplify' % study) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8588 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags?short' % study) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8589 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8590 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/instances-tags' % study) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8591 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8592 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?simplify' % series) [instance]['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8593 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags?short' % series) [instance]['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8594 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8595 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/instances-tags' % series) [instance]['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8596 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8597 # Test "GetSharedTags()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8598 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8599 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8600 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8601 self.assertEqual('PatientName', DoGet(_REMOTE, '/patients/%s/shared-tags' % patient) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8602 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8603 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8604 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8605 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8606 self.assertEqual('PatientName', DoGet(_REMOTE, '/studies/%s/shared-tags' % study) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8607 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8608 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?simplify' % series) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8609 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags?short' % series) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8610 self.assertEqual('KNIX', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8611 self.assertEqual('PatientName', DoGet(_REMOTE, '/series/%s/shared-tags' % series) ['0010,0010']['Name']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8612 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8613 # Test "GetModule()" in "OrthancRestResources.cpp" |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8614 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module' % patient) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8615 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?simplify' % patient) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8616 self.assertEqual('KNIX', DoGet(_REMOTE, '/patients/%s/module?short' % patient) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8617 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8618 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient' % study) ['0010,0010']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8619 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % study) ['PatientName']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8620 self.assertEqual('KNIX', DoGet(_REMOTE, '/studies/%s/module-patient?short' % study) ['0010,0010']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8621 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8622 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module' % study) ['0008,1030']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8623 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?simplify' % study) ['StudyDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8624 self.assertEqual('Knee (R)', DoGet(_REMOTE, '/studies/%s/module?short' % study) ['0008,1030']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8625 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8626 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module' % series) ['0008,103e']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8627 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?simplify' % series) ['SeriesDescription']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8628 self.assertEqual('AX. FSE PD', DoGet(_REMOTE, '/series/%s/module?short' % series) ['0008,103e']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8629 |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8630 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8631 DoGet(_REMOTE, '/instances/%s/module' % instance) ['0008,0018']['Value']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8632 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8633 DoGet(_REMOTE, '/instances/%s/module?simplify' % instance) ['SOPInstanceUID']) |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8634 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
cd9da28451cc
test_dicom_to_json_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
411
diff
changeset
|
8635 DoGet(_REMOTE, '/instances/%s/module?short' % instance) ['0008,0018']) |
| 413 | 8636 |
| 8637 # Test "ListQueryAnswers()" in "OrthancRestModalities.cpp" | |
| 8638 a = DoPost(_REMOTE, '/modalities/self/query', { 'Level' : 'Study', | |
| 8639 'Query' : { 'PatientID' : '*' }}) ['ID'] | |
| 8640 | |
| 8641 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a))) | |
| 8642 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Value']) | |
| 8643 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers?expand' % a) [0]['0010,0020']['Name']) | |
| 8644 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a) [0]['PatientID']) | |
| 8645 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers?expand&short' % a) [0]['0010,0020']) | |
| 8646 | |
| 8647 # Test "GetQueryOneAnswer()" in "OrthancRestModalities.cpp" | |
| 8648 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Value']) | |
| 8649 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/answers/0/content' % a) ['0010,0020']['Name']) | |
| 8650 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a) ['PatientID']) | |
| 8651 self.assertEqual('ozp00SjY2xG', DoGet(_REMOTE, '/queries/%s/answers/0/content?short' % a) ['0010,0020']) | |
| 8652 | |
| 8653 # Test "GetQueryArguments()" in "OrthancRestModalities.cpp" | |
| 8654 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Value']) | |
| 8655 self.assertEqual('PatientID', DoGet(_REMOTE, '/queries/%s/query' % a) ['0010,0020']['Name']) | |
| 8656 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?simplify' % a) ['PatientID']) | |
| 8657 self.assertEqual('*', DoGet(_REMOTE, '/queries/%s/query?short' % a) ['0010,0020']) | |
| 8658 | |
|
414
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8659 # Test "BulkContent()" in "OrthancRestResources.cpp" |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8660 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ] }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8661 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8662 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['PatientID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8663 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['StudyDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8664 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['PatientName']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8665 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['SeriesDescription']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8666 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8667 a[3]['MainDicomTags']['SOPInstanceUID']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8668 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8669 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8670 'Short': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8671 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8672 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8673 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8674 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8675 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8676 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8677 a[3]['MainDicomTags']['0008,0018']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8678 |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8679 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ patient, study, series, instance ], |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8680 'Full': True }) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8681 self.assertEqual(4, len(a)) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8682 self.assertEqual('ozp00SjY2xG', a[0]['MainDicomTags']['0010,0020']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8683 self.assertEqual('PatientID', a[0]['MainDicomTags']['0010,0020']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8684 self.assertEqual('Knee (R)', a[1]['MainDicomTags']['0008,1030']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8685 self.assertEqual('StudyDescription', a[1]['MainDicomTags']['0008,1030']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8686 self.assertEqual('KNIX', a[1]['PatientMainDicomTags']['0010,0010']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8687 self.assertEqual('PatientName', a[1]['PatientMainDicomTags']['0010,0010']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8688 self.assertEqual('AX. FSE PD', a[2]['MainDicomTags']['0008,103e']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8689 self.assertEqual('SeriesDescription', a[2]['MainDicomTags']['0008,103e']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8690 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8691 a[3]['MainDicomTags']['0008,0018']['Value']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8692 self.assertEqual('SOPInstanceUID', a[3]['MainDicomTags']['0008,0018']['Name']) |
|
a2beea45a53d
test /tools/bulk-content
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
413
diff
changeset
|
8693 |
| 415 | 8694 |
| 8695 def test_bulk_content(self): | |
| 8696 # New in Orthanc 1.9.4 | |
| 8697 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] | |
| 8698 knee2 = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm') ['ID'] | |
| 8699 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] | |
| 8700 | |
| 8701 brainixHierarchy = [ | |
| 8702 DoGet(_REMOTE, '/instances/%s/patient' % brainix) ['ID'], | |
| 8703 DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'], | |
| 8704 DoGet(_REMOTE, '/instances/%s/series' % brainix) ['ID'], | |
| 8705 brainix, | |
| 8706 ] | |
| 8707 | |
| 8708 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy }) | |
| 8709 self.assertEqual(4, len(a)) | |
| 8710 b = map(lambda x: x['ID'], a) | |
| 8711 for i in range(4): | |
| 8712 self.assertEqual(brainixHierarchy[i], b[i]) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8713 self.assertTrue('Metadata' in a[i]) |
| 415 | 8714 |
| 8715 for (level, index) in [ | |
| 8716 ('Patient', 0), | |
| 8717 ('Study', 1), | |
| 8718 ('Series', 2), | |
| 8719 ('Instance', 3), | |
| 8720 ]: | |
| 8721 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : brainixHierarchy, | |
| 8722 'Level' : level }) | |
| 8723 self.assertEqual(1, len(a)) | |
| 8724 self.assertEqual(level, a[0]['Type']) | |
| 8725 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8726 self.assertTrue('Metadata' in a[0]) |
| 415 | 8727 |
| 8728 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ brainix ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8729 'Level' : level, |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8730 'Metadata' : False }) |
| 415 | 8731 self.assertEqual(1, len(a)) |
| 8732 self.assertEqual(level, a[0]['Type']) | |
| 8733 self.assertEqual(brainixHierarchy[index], a[0]['ID']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8734 self.assertFalse('Metadata' in a[0]) |
| 415 | 8735 |
| 8736 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2, brainix ] }) | |
| 8737 self.assertEqual(3, len(a)) | |
| 8738 for item in a: | |
| 8739 self.assertEqual('Instance', item['Type']) | |
| 8740 b = map(lambda x: x['ID'], a) | |
| 8741 self.assertTrue(knee1 in b) | |
| 8742 self.assertTrue(knee2 in b) | |
| 8743 self.assertTrue(brainix in b) | |
| 8744 | |
| 8745 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
| 8746 'Level' : 'Series' }) | |
| 8747 self.assertEqual(2, len(a)) | |
| 8748 for item in a: | |
| 8749 self.assertEqual('Series', item['Type']) | |
| 8750 b = map(lambda x: x['ID'], a) | |
| 8751 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee1) ['ParentSeries'] in b) | |
| 8752 self.assertTrue(DoGet(_REMOTE, '/instances/%s' % knee2) ['ParentSeries'] in b) | |
| 8753 | |
| 8754 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8755 'Level' : 'Study', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8756 'Metadata' : False }) |
| 415 | 8757 self.assertEqual(1, len(a)) |
| 8758 self.assertEqual(DoGet(_REMOTE, '/instances/%s/study' % knee1) ['ID'], a[0]['ID']) | |
| 8759 self.assertEqual('Study', a[0]['Type']) | |
| 8760 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8761 self.assertFalse('Metadata' in a[0]) |
| 415 | 8762 |
| 8763 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, knee2 ], | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8764 'Level' : 'Patient', |
|
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8765 'Metadata' : True }) |
| 415 | 8766 self.assertEqual(1, len(a)) |
| 8767 self.assertEqual(DoGet(_REMOTE, '/instances/%s/patient' % knee1) ['ID'], a[0]['ID']) | |
| 8768 self.assertEqual('Patient', a[0]['Type']) | |
| 8769 self.assertEqual('KNEE', a[0]['MainDicomTags']['PatientName']) | |
|
418
8a3d67a40083
test "Metadata" in "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
417
diff
changeset
|
8770 self.assertTrue('Metadata' in a[0]) |
|
451
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8771 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8772 self.assertEqual(2, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8773 self.assertTrue('MainDicomTagsSignature' in a[0]['Metadata']) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8774 else: |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8775 self.assertEqual(1, len(a[0]['Metadata'])) |
|
33051f9ac850
new metadata MainDicomTagsSignature
Alain Mazy <am@osimis.io>
parents:
449
diff
changeset
|
8776 self.assertTrue('LastUpdate' in a[0]['Metadata']) |
| 415 | 8777 |
| 8778 for level in [ 'Instance', 'Series', 'Study', 'Patient' ]: | |
| 8779 a = DoPost(_REMOTE, '/tools/bulk-content', { 'Resources' : [ knee1, brainix ], | |
| 8780 'Level' : level }) | |
| 8781 self.assertEqual(2, len(a)) | |
| 8782 for item in a: | |
| 8783 self.assertEqual(level, item['Type']) | |
| 8784 b = map(lambda x: x['ID'], a) | |
| 8785 if level == 'Instance': | |
| 8786 self.assertTrue(knee1 in b) | |
| 8787 self.assertTrue(brainix in b) | |
| 8788 else: | |
| 8789 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (knee1, level.lower())) ['ID'] in b) | |
| 8790 self.assertTrue(DoGet(_REMOTE, '/instances/%s/%s' % (brainix, level.lower())) ['ID'] in b) | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8791 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8792 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8793 def test_split_instances(self): |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8794 # New in 1.9.4 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8795 knee1 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8796 knee2 = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm') ['ID'] |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8797 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8798 series = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285' |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8799 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8800 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8801 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8802 self.assertEqual(1, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8803 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8804 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8805 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8806 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee1) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8807 self.assertEqual('2', DoGet(_REMOTE, '/instances/%s/tags?simplify' % knee2) ['InstanceNumber']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8808 for i in [ knee1, knee2 ]: |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8809 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8810 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % i) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8811 |
| 417 | 8812 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { |
| 8813 'KeepSource' : False | |
| 8814 })) # Neither "Instances", nor "Series" | |
| 8815 | |
| 8816 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8817 'KeepSource' : False, | |
| 8818 'Instances' : [ ], | |
| 8819 'Series' : [ ] | |
| 8820 })) # Empty "Instances" and "Series" | |
| 8821 | |
| 8822 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8823 'Instances' : [ 'nope' ], | |
| 8824 'KeepSource' : False | |
| 8825 })) | |
| 8826 | |
| 8827 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/studies/%s/split' % study, { | |
| 8828 'Series' : [ 'nope' ], | |
| 8829 'KeepSource' : False | |
| 8830 })) | |
| 8831 | |
|
416
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8832 result = DoPost(_REMOTE, '/studies/%s/split' % study, { |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8833 'Instances' : [ knee1 ], |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8834 'KeepSource' : False |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8835 }) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8836 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8837 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8838 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8839 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8840 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8841 instances = DoGet(_REMOTE, '/instances') |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8842 self.assertEqual(2, len(instances)) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8843 |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8844 self.assertFalse(knee1 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8845 self.assertTrue(knee2 in instances) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8846 instances.remove(knee2) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8847 self.assertEqual(series, DoGet(_REMOTE, '/instances/%s/series' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8848 self.assertEqual(study, DoGet(_REMOTE, '/instances/%s/study' % knee2) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8849 self.assertNotEqual(series, DoGet(_REMOTE, '/instances/%s/series' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8850 self.assertNotEqual(study, DoGet(_REMOTE, '/instances/%s/study' % instances[0]) ['ID']) |
|
80164728c038
test_split_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
415
diff
changeset
|
8851 self.assertEqual('1', DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0]) ['InstanceNumber']) |
|
419
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8852 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8853 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8854 def test_merge_instances(self): |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8855 # New in Orthanc 1.9.4 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8856 knee = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8857 brainix = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8858 brainixStudy = DoGet(_REMOTE, '/instances/%s/study' % brainix) ['ID'] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8859 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8860 self.assertEqual(2, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8861 self.assertEqual(2, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8862 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8863 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8864 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8865 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8866 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8867 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8868 self.assertTrue(knee in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8869 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8870 result = DoPost(_REMOTE, '/studies/%s/merge' % brainixStudy, { |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8871 'Resources' : [ knee ] |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8872 }) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8873 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8874 self.assertEqual(1, len(DoGet(_REMOTE, '/patients'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8875 self.assertEqual(1, len(DoGet(_REMOTE, '/studies'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8876 self.assertEqual(2, len(DoGet(_REMOTE, '/series'))) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8877 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/studies')[0]) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8878 |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8879 instances = DoGet(_REMOTE, '/instances') |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8880 self.assertEqual(2, len(instances)) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8881 self.assertTrue(brainix in instances) |
|
6a57c4efe38a
test_merge_instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
418
diff
changeset
|
8882 self.assertFalse(knee in instances) |
|
423
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8883 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8884 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8885 def test_query_retrieve_format(self): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8886 # New in Orthanc 1.9.5 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8887 # https://groups.google.com/g/orthanc-users/c/1KC4d-0K8s0/m/hfYYz1-tAgAJ |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8888 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') ['ID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8889 study = DoGet(_REMOTE, '/instances/%s/study' % i) ['MainDicomTags']['StudyInstanceUID'] |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8890 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8891 a = DoPost(_REMOTE, '/modalities/self/query', { |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8892 'Level' : 'Study', |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8893 'Query' : {} |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8894 }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8895 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8896 b = DoGet(_REMOTE, a['Path'] + '/answers') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8897 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8898 self.assertEqual('0', b[0]) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8899 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8900 b = DoGet(_REMOTE, a['Path'] + '/answers?expand') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8901 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8902 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8903 self.assertEqual('ISO_IR 100', b[0]['0008,0005']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8904 self.assertEqual('SpecificCharacterSet', b[0]['0008,0005']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8905 self.assertEqual('A10003245599', b[0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8906 self.assertEqual('AccessionNumber', b[0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8907 self.assertEqual('STUDY', b[0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8908 self.assertEqual('QueryRetrieveLevel', b[0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8909 self.assertEqual('ORTHANC', b[0]['0008,0054']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8910 self.assertEqual('RetrieveAETitle', b[0]['0008,0054']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8911 self.assertEqual('887', b[0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8912 self.assertEqual('PatientID', b[0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8913 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8914 self.assertEqual('StudyInstanceUID', b[0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8915 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8916 for (key, value) in b[0].items(): |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8917 self.assertEqual('String', value['Type']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8918 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8919 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8920 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8921 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8922 # What is below this point didn't work on Orthanc <= 1.9.3 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8923 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8924 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&short') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8925 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8926 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8927 self.assertEqual('ISO_IR 100', b[0]['0008,0005']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8928 self.assertEqual('A10003245599', b[0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8929 self.assertEqual('STUDY', b[0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8930 self.assertEqual('ORTHANC', b[0]['0008,0054']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8931 self.assertEqual('887', b[0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8932 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8933 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8934 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?short'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8935 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8936 b = DoGet(_REMOTE, a['Path'] + '/answers?expand&simplify') |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8937 self.assertEqual(1, len(b)) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8938 self.assertEqual(6, len(b[0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8939 self.assertEqual('ISO_IR 100', b[0]['SpecificCharacterSet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8940 self.assertEqual('A10003245599', b[0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8941 self.assertEqual('STUDY', b[0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8942 self.assertEqual('ORTHANC', b[0]['RetrieveAETitle']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8943 self.assertEqual('887', b[0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8944 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b[0]['StudyInstanceUID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8945 self.assertEqual(json.dumps(b[0]), |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8946 json.dumps(DoGet(_REMOTE, a['Path'] + '/answers/0/content?simplify'))) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8947 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8948 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], {}) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8949 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8950 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8951 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8952 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8953 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8954 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8955 self.assertEqual('STUDY', b['Query'][0]['0008,0052']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8956 self.assertEqual('887', b['Query'][0]['0010,0020']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8957 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8958 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8959 # What is below this point didn't work on Orthanc <= 1.9.4 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8960 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8961 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Full' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8962 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8963 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8964 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8965 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8966 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8967 self.assertEqual('A10003245599', b['Query'][0]['0008,0050']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8968 self.assertEqual('STUDY', b['Query'][0]['0008,0052']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8969 self.assertEqual('887', b['Query'][0]['0010,0020']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8970 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['0020,000d']['Value']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8971 self.assertEqual('AccessionNumber', b['Query'][0]['0008,0050']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8972 self.assertEqual('QueryRetrieveLevel', b['Query'][0]['0008,0052']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8973 self.assertEqual('PatientID', b['Query'][0]['0010,0020']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8974 self.assertEqual('StudyInstanceUID', b['Query'][0]['0020,000d']['Name']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8975 |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8976 b = DoPost(_REMOTE, '/queries/%s/retrieve' % a['ID'], { 'Simplify' : True }) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8977 self.assertEqual('REST API', b['Description']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8978 self.assertEqual('ORTHANC', b['LocalAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8979 self.assertEqual('ORTHANC', b['RemoteAet']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8980 self.assertEqual(1, len(b['Query'])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8981 self.assertEqual(4, len(b['Query'][0])) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8982 self.assertEqual('A10003245599', b['Query'][0]['AccessionNumber']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8983 self.assertEqual('STUDY', b['Query'][0]['QueryRetrieveLevel']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8984 self.assertEqual('887', b['Query'][0]['PatientID']) |
|
cef3847dc8af
test_query_retrieve_format
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
420
diff
changeset
|
8985 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', b['Query'][0]['StudyInstanceUID']) |
|
424
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8986 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8987 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8988 def test_anonymize_nested(self): |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8989 # New in Orthanc 1.9.5 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8990 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8991 tags = { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8992 'MappingResourceIdentificationSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8993 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8994 # Test "DicomModification::RelationshipsVisitor::GetDefaultAction()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8995 '0009,1002' : 'ABCD', # Private tag not registered in dictionary |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8996 '0016,0071' : '-12', # "GPS Latitude" whose VR is DS in "removals_" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8997 '0034,0005' : '13', # VR is OB, and in "clearings_" (only in DCMTK 3.6.2) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8998 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
8999 # Test "DicomModification::RelationshipsVisitor::VisitString()" |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9000 'StudyDescription' : 'Hello', # Removed |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9001 'StudyDate' : '20210705', # Cleared |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9002 '0009,1001' : '-1234', # Private tag whose VR is DS |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9003 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9004 # Test anonymization of nested sequences |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9005 'ReferencedStudySequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9006 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9007 'PatientID' : 'HELLO' |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9008 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9009 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9010 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9011 # Non-anonymized tags |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9012 'CodeMeaning' : 'MEANING1', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9013 'EquivalentCodeSequence' : [ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9014 { |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9015 'CodeMeaning' : 'MEANING2', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9016 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9017 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9018 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9019 ], |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9020 } |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9021 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9022 a = DoPost(_REMOTE, '/tools/create-dicom', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9023 json.dumps({ |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9024 'Tags' : tags, |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9025 'PrivateCreator' : 'Lunit', |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9026 })) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9027 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9028 study = DoGet(_REMOTE, '/instances/%s/study' % a) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9029 b = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9030 c = DoGet(_REMOTE, '/studies/%s/instances' % b) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9031 self.assertEqual(1, len(c)) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9032 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9033 tags1 = DoGet(_REMOTE, '/instances/%s/tags?short' % a) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9034 tags2 = DoGet(_REMOTE, '/instances/%s/tags?short' % c[0]['ID']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9035 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9036 # Only "StudyDate" must be present in |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9037 # "MappingResourceIdentificationSequence" after anonymization |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9038 self.assertEqual(1, len(tags1['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9039 self.assertEqual(1, len(tags2['0008,0124'])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9040 self.assertEqual(9, len(tags1['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9041 self.assertEqual(3, len(tags2['0008,0124'][0])) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9042 self.assertEqual('', tags2['0008,0124'][0]['0008,0020']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9043 self.assertEqual('MEANING1', tags2['0008,0124'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9044 self.assertEqual('MEANING2', tags2['0008,0124'][0]['0008,0121'][0]['0008,0104']) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9045 |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9046 self.assertTrue('0008,1110' in tags1['0008,0124'][0]) |
|
934f505677da
test_anonymize_nested
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
423
diff
changeset
|
9047 self.assertFalse('0008,1110' in tags2['0008,0124'][0]) |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9048 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9049 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9050 def test_issue_200(self): |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9051 # https://groups.google.com/g/orthanc-users/c/9CTLsL-JqDw/m/2I0xgyYHBAAJ |
|
589
47b87c87213b
new tests for GET /tools/create-archive
Alain Mazy <am@osimis.io>
parents:
588
diff
changeset
|
9052 # https://bugs.orthanc-server.com/show_bug.cgi?id=200 |
| 428 | 9053 self.assertEqual(0, len(DoGet(_REMOTE, '/changes') ['Changes'])) |
| 9054 self.assertEqual(0, len(DoGet(_REMOTE, '/changes?last') ['Changes'])) | |
| 429 | 9055 u = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
427
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9056 |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9057 for change in DoGet(_REMOTE, '/changes') ['Changes']: |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9058 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) |
|
77455e156112
integration test for issue 200
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
424
diff
changeset
|
9059 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) |
| 428 | 9060 |
| 9061 last = DoGet(_REMOTE, '/changes?last') ['Changes'] | |
| 9062 self.assertEqual(1, len(last)) | |
| 9063 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 9064 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
| 429 | 9065 |
| 9066 self.assertEqual(0, len(DoGet(_REMOTE, '/exports') ['Exports'])) | |
| 9067 self.assertEqual(0, len(DoGet(_REMOTE, '/exports?last') ['Exports'])) | |
| 9068 DoPost(_REMOTE, '/modalities/self/store', [ u ]) | |
| 9069 | |
| 9070 for change in DoGet(_REMOTE, '/exports') ['Exports']: | |
| 9071 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', change['Date'])) | |
| 9072 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', change['ID'])) | |
| 9073 | |
| 9074 last = DoGet(_REMOTE, '/exports?last') ['Exports'] | |
| 9075 self.assertEqual(1, len(last)) | |
| 9076 self.assertEqual('ozp00SjY2xG', last[0]['PatientID']) | |
| 9077 self.assertEqual('self', last[0]['RemoteModality']) | |
| 9078 self.assertEqual('Instance', last[0]['ResourceType']) | |
| 9079 self.assertEqual('/instances/%s' % last[0]['ID'], last[0]['Path']) | |
| 9080 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', last[0]['StudyInstanceUID']) | |
| 9081 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', last[0]['SeriesInstanceUID']) | |
| 9082 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', last[0]['SOPInstanceUID']) | |
| 9083 self.assertTrue(re.match('[0-9]{8}T[0-9]{6}', last[0]['Date'])) | |
| 9084 self.assertTrue(re.match('[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}-[0-9a-z]{8}', last[0]['ID'])) | |
|
431
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9085 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9086 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9087 def test_upload_dicomdir_archive(self): |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9088 # This test fails on Orthanc <= 1.9.6 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9089 # https://groups.google.com/g/orthanc-users/c/sgBU89o4nhU/m/kbRAYiQUAAAJ |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9090 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9091 # Create a ZIP archive with a DICOMDIR |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9092 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9093 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9094 media = DoGet(_REMOTE, '/studies/%s/media' % study) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9095 DoDelete(_REMOTE, '/instances/%s' % instance) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9096 |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9097 result = DoPost(_REMOTE, '/instances', media) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9098 self.assertEqual(1, len(result)) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9099 self.assertEqual(instance, result[0]['ID']) |
|
e665c493e23e
test_upload_dicomdir_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
429
diff
changeset
|
9100 self.assertEqual('Success', result[0]['Status']) |
|
432
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9101 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9102 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9103 def test_modify_keep_source(self): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9104 # https://groups.google.com/g/orthanc-users/c/1lvlBTs2WUY/m/HmYsc2CPBQAJ |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9105 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9106 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9107 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9108 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9109 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, {}) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9110 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9111 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9112 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9113 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9114 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9115 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9116 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9117 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9118 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9119 a = DoPost(_REMOTE, '/studies/%s/anonymize' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9120 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9121 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9122 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9123 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9124 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9125 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'Replace' : { } }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9126 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9127 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9128 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9129 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9130 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : True }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9131 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9132 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9133 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9134 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9135 a = DoPost(_REMOTE, '/studies/%s/modify' % study, { 'KeepSource' : False }) ['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9136 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9137 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9138 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9139 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9140 def GetStudy(a): |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9141 b = filter(lambda x: x['Type'] == 'Study', a['Resources']) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9142 if len(b) == 1: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9143 return b[0]['ID'] |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9144 else: |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9145 raise Exception() |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9146 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9147 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9148 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ]})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9149 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9150 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9151 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9152 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9153 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9154 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9155 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9156 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9157 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9158 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-anonymize', { 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9159 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9160 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9161 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9162 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9163 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9164 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9165 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9166 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9167 # No more studies, because "bulk-modify" was not given a |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9168 # level, so the modified instance belongs to the same study as |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9169 # the original instance |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9170 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9171 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9172 # The following fails on Orthanc <= 1.9.6 because "Level" was |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9173 # introduced in 1.9.7 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9174 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9175 UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9176 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'Replace' : { }})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9177 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9178 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9179 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9180 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9181 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : True})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9182 self.assertEqual(2, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9183 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9184 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9185 |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9186 a = GetStudy(DoPost(_REMOTE, '/tools/bulk-modify', { 'Level' : 'Study', 'Resources' : [ study ], 'KeepSource' : False})) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9187 self.assertEqual(1, len(DoGet(_REMOTE, '/instances'))) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9188 DoDelete(_REMOTE, '/studies/%s' % a) |
|
f4609c97e995
test_modify_keep_source
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
431
diff
changeset
|
9189 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) |
|
433
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9190 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9191 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9192 def test_multiframe_windowing(self): |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9193 # Fixed in Orthanc 1.9.7 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9194 a = UploadInstance(_REMOTE, 'MultiframeWindowing.dcm') ['ID'] |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9195 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9196 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9197 self.assertEqual(0x00, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9198 self.assertEqual(0x10, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9199 self.assertEqual(0x20, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9200 self.assertEqual(0x30, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9201 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9202 # Center the window on value "16 == 0x10", thus it has the |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9203 # mid-level value (i.e. 127) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9204 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9205 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9206 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9207 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9208 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9209 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9210 # Window center and window width are burned in FrameVOILUTSequence for frame 0 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9211 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9212 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9213 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9214 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9215 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9216 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9217 im = GetImage(_REMOTE, '/instances/%s/frames/1/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9218 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9219 self.assertEqual(116, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9220 self.assertEqual(132, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9221 self.assertEqual(148, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9222 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9223 im = GetImage(_REMOTE, '/instances/%s/frames/2/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9224 self.assertEqual(0, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9225 self.assertEqual(32, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9226 self.assertEqual(64, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9227 self.assertEqual(96, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9228 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9229 im = GetImage(_REMOTE, '/instances/%s/frames/3/rendered?window-center=127&window-width=256' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9230 self.assertEqual(100, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9231 self.assertEqual(132, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9232 self.assertEqual(164, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9233 self.assertEqual(196, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9234 |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9235 im = GetImage(_REMOTE, '/instances/%s/frames/0/rendered?window-center=16&window-width=128' % a) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9236 self.assertEqual(127 - 2 * 16, im.getpixel((0, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9237 self.assertEqual(127, im.getpixel((1, 0))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9238 self.assertEqual(127 + 2 * 16, im.getpixel((0, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9239 self.assertEqual(127 + 2 * 32, im.getpixel((1, 1))) |
|
cb579ad96a6c
test_multiframe_windowing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
432
diff
changeset
|
9240 |
|
436
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9241 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9242 def test_dicom_seg(self): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9243 # This test fails in Orthanc <= 1.9.7 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9244 a = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9245 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9246 self.assertEqual(96, len(DoGet(_REMOTE, '/instances/%s/frames' % a))) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9247 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/96/preview' % a)) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9248 |
|
9f87d5b2b382
added test_dicom_seg
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parents:
433
diff
changeset
|
9249 nonEmptyFrames = [ 11, 12, 13, 14, 15, 16, 39, 40, 42, 43, 44, 45, |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
9250 46, 47, 48, 49, 75, 76, 77, 78, 79, 80, 81 ] |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
9251 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
9252 for i in range(96): |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9253 im = GetImage(_REMOTE, '/instances/%s/frames/%d/preview' % (a, i)) |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
9254 self.assertEqual('L', im.mode) |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
9255 self.assertEqual(256, im.size[0]) |
|
9f87d5b2b382
added test_dicom_seg
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parents:
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diff
changeset
|
9256 self.assertEqual(256, im.size[1]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
9257 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9258 e = im.getextrema() |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9259 self.assertEqual(0, e[0]) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9260 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
9261 if e[1] == 0: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9262 self.assertFalse(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9263 else: |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9264 self.assertTrue(i in nonEmptyFrames) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9265 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9266 im1 = GetImage(_REMOTE, '/instances/%s/frames/44/preview' % a) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9267 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9268 # Generated by "dcm2pnm +F 45 DicomSeg.dcm DicomSeg-Frame45.pgm" |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9269 im2 = Image.open(GetDatabasePath('DicomSeg-Frame45.pgm')) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
9270 im2 = im2.point(lambda p: 255 if p == 128 else 0) |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9271 |
|
9f87d5b2b382
added test_dicom_seg
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
433
diff
changeset
|
9272 self.assertTrue(ImageChops.difference(im1, im2).getbbox() is None) |
| 440 | 9273 |
| 9274 | |
| 9275 def test_numpy(self): | |
|
448
63f475995400
Orthanc 1.9.8 is now known as Orthanc 1.10.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
447
diff
changeset
|
9276 # New in Orthanc 1.10.0 |
| 440 | 9277 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID'] |
| 9278 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 9279 b = UploadInstance(_REMOTE, 'DicomSeg.dcm') ['ID'] | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9280 d = UploadInstance(_REMOTE, 'Issue124.dcm') ['ID'] |
| 440 | 9281 |
| 9282 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % a))) | |
| 9283 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9284 self.assertEqual(numpy.float32, c.dtype) | |
| 9285 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9286 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9287 self.assertAlmostEqual(536, c.max()) |
| 440 | 9288 |
| 9289 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % a))) | |
| 9290 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9291 self.assertEqual(numpy.uint16, c.dtype) | |
| 9292 self.assertEqual((288, 288, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9293 self.assertEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9294 self.assertEqual(536, c.max()) |
| 440 | 9295 |
| 9296 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?rescale=1&compress=false' % a))) | |
| 9297 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9298 self.assertEqual(numpy.float32, c.dtype) | |
| 9299 self.assertEqual((1, 288, 288, 1), c.shape) | |
| 9300 | |
| 9301 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 9302 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=true&compress=0' % series))) | |
| 9303 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9304 self.assertEqual(numpy.float32, c.dtype) | |
| 9305 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 9306 | |
| 9307 series = DoGet(_REMOTE, '/instances/%s/series' % a)['ID'] | |
| 9308 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy?rescale=1' % series))) | |
| 9309 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9310 self.assertEqual(numpy.float32, c.dtype) | |
| 9311 self.assertEqual((2, 288, 288, 1), c.shape) | |
| 9312 | |
| 9313 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy?compress' % a))) | |
| 9314 self.assertTrue(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9315 self.assertEqual(1, len(c.files)) | |
| 9316 self.assertEqual(numpy.float32, c['arr_0'].dtype) | |
| 9317 self.assertEqual((1, 288, 288, 1), c['arr_0'].shape) | |
| 9318 | |
| 9319 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % b))) | |
| 9320 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9321 self.assertEqual(numpy.float32, c.dtype) | |
| 9322 self.assertEqual((256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9323 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9324 self.assertAlmostEqual(0, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9325 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9326 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/14/numpy' % b))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9327 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9328 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9329 self.assertEqual((256, 256, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9330 self.assertAlmostEqual(0, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9331 self.assertAlmostEqual(255, c.max()) |
| 440 | 9332 |
| 9333 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/numpy' % b))) | |
| 9334 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9335 self.assertEqual(numpy.float32, c.dtype) | |
| 9336 self.assertEqual((96, 256, 256, 1), c.shape) | |
| 9337 | |
| 9338 series = DoGet(_REMOTE, '/instances/%s/series' % b)['ID'] | |
| 9339 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/series/%s/numpy' % series))) | |
| 9340 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) | |
| 9341 self.assertEqual(numpy.float32, c.dtype) | |
| 9342 self.assertEqual((96, 256, 256, 1), c.shape) | |
|
441
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9343 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9344 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9345 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9346 self.assertEqual(numpy.float32, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9347 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9348 self.assertAlmostEqual(-3024, c.min()) # RescaleIntercept equals -1024 in this image |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9349 self.assertAlmostEqual(2374, c.max()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9350 |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9351 c = numpy.load(io.BytesIO(DoGet(_REMOTE, '/instances/%s/frames/0/numpy?rescale=0' % d))) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9352 self.assertFalse(isinstance(c, numpy.lib.npyio.NpzFile)) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9353 self.assertEqual(numpy.int16, c.dtype) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9354 self.assertEqual((512, 512, 1), c.shape) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9355 self.assertEqual(-2000, c.min()) |
|
21a45ddc9256
expanded test_numpy
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
440
diff
changeset
|
9356 self.assertEqual(3398, c.max()) |
|
442
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9357 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9358 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9359 def test_find_patient_name_with_brackets_and_star(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9360 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9361 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9362 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9363 "Replace" : { |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9364 "PatientName" : "MyName[*]", |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9365 "PatientID": "test_brackets" |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9366 }, |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9367 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9368 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9369 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9370 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9371 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9372 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9373 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9374 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9375 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9376 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9377 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9378 'Query' : { 'PatientName' : 'MyName[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9379 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9380 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9381 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9382 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9383 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9384 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9385 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9386 'Query' : { 'PatientName' : 'MyName*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9387 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9388 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9389 def test_find_patient_name_with_brackets_only(self): |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9390 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID'] |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9391 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9392 modified = DoPost(_REMOTE, '/instances/%s/modify' % u, json.dumps({ |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9393 "Replace" : { |
|
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added tests for patient names with square brackets
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parents:
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diff
changeset
|
9394 "PatientName" : "MyName2[]", |
|
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added tests for patient names with square brackets
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parents:
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diff
changeset
|
9395 "PatientID": "test_brackets2" |
|
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9396 }, |
|
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added tests for patient names with square brackets
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parents:
441
diff
changeset
|
9397 "Force": True |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9398 }), |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9399 'application/json') |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9400 |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9401 m = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID'] |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
9402 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9403 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9404 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9405 self.assertEqual(1, len(a)) |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9406 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9407 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9408 'Query' : { 'PatientName' : 'MyName2[*]' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9409 self.assertEqual(1, len(a)) |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9410 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9411 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9412 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
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Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9413 self.assertEqual(1, len(a)) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9414 |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9415 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9416 'Query' : { 'PatientName' : 'MyName2*' }}) |
|
af57603438b3
added tests for patient names with square brackets
Alain Mazy <am@osimis.io>
parents:
441
diff
changeset
|
9417 self.assertEqual(1, len(a)) |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9418 |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9419 |
|
452
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9420 def test_rest_find_requested_tags(self): |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9421 if IsOrthancVersionAbove(_REMOTE, 1, 11, 1): # RequestedTags introduced in 1.11.0 but Sequences allowed since 1.11.1 |
| 471 | 9422 |
| 9423 # Upload instances | |
| 9424 for i in range(2): | |
| 9425 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9426 | |
| 9427 # Patient level | |
| 9428 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9429 'CaseSensitive' : False, | |
| 9430 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9431 'RequestedTags' : [ 'PatientName', 'PatientID', 'PatientSex', 'PatientBirthDate'], |
| 471 | 9432 'Expand': True |
| 9433 }) | |
| 9434 self.assertEqual(1, len(a)) | |
| 9435 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9436 self.assertIn('PatientID', a[0]['RequestedTags']) | |
| 9437 self.assertIn('PatientSex', a[0]['RequestedTags']) | |
| 9438 self.assertIn('PatientBirthDate', a[0]['RequestedTags']) | |
| 9439 | |
| 9440 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9441 self.assertEqual('5Yp0E', a[0]['RequestedTags']['PatientID']) | |
| 9442 self.assertEqual('0000', a[0]['RequestedTags']['PatientSex']) | |
| 9443 self.assertEqual('19490301', a[0]['RequestedTags']['PatientBirthDate']) | |
| 9444 | |
| 9445 # Study level, request patient tags too | |
| 9446 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9447 'CaseSensitive' : False, | |
| 9448 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9449 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID'], | |
| 9450 'Expand': True | |
| 9451 }) | |
| 9452 self.assertEqual(1, len(a)) | |
| 9453 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9454 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9455 | |
| 9456 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9457 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9458 | |
| 9459 | |
| 9460 # Series level, request patient and study tags too | |
| 9461 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9462 'CaseSensitive' : False, | |
| 9463 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9464 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'RequestAttributesSequence'], |
| 471 | 9465 'Expand': True |
| 9466 }) | |
| 9467 self.assertEqual(1, len(a)) | |
| 9468 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9469 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9470 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9471 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9472 |
| 9473 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9474 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9475 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9476 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
| 471 | 9477 |
| 9478 | |
| 9479 # Instance level, request patient, study and series tags too, include tags that are not part of the main dicom tags | |
| 9480 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9481 'CaseSensitive' : False, | |
| 9482 'Query' : { 'PatientName' : 'BRAINIX' }, | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9483 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'PhotometricInterpretation', 'RequestAttributesSequence'], |
| 471 | 9484 'Expand': True |
| 9485 }) | |
| 9486 self.assertEqual(1, len(a)) | |
| 9487 self.assertIn('PatientName', a[0]['RequestedTags']) | |
| 9488 self.assertIn('StudyInstanceUID', a[0]['RequestedTags']) | |
| 9489 self.assertIn('SeriesInstanceUID', a[0]['RequestedTags']) | |
| 9490 self.assertIn('PhotometricInterpretation', a[0]['RequestedTags']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9491 self.assertIn('RequestAttributesSequence', a[0]['RequestedTags']) |
| 471 | 9492 |
| 9493 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9494 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9495 self.assertEqual('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9496 self.assertEqual('MONOCHROME2', a[0]['RequestedTags']['PhotometricInterpretation']) | |
|
486
6144ef431512
new tests for sequences in ExtraMainDicomTags
Alain Mazy <am@osimis.io>
parents:
482
diff
changeset
|
9497 self.assertEqual('A10029316690', a[0]['RequestedTags']['RequestAttributesSequence'][0]['RequestedProcedureID']) |
|
452
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9498 |
|
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9499 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9500 def test_rest_find_requested_tags_computed_tags(self): |
| 471 | 9501 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9502 # Upload instances | |
| 9503 for i in range(2): | |
| 9504 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) | |
| 9505 | |
| 9506 | |
| 9507 # Patient level | |
| 9508 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', | |
| 9509 'CaseSensitive' : False, | |
| 9510 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9511 'RequestedTags' : [ 'PatientName', 'NumberOfPatientRelatedStudies', 'NumberOfPatientRelatedSeries', 'NumberOfPatientRelatedInstances'], | |
| 9512 'Expand': True | |
| 9513 }) | |
| 9514 self.assertEqual(1, len(a)) | |
| 9515 | |
| 9516 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9517 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedStudies']) | |
| 9518 self.assertEqual('1', a[0]['RequestedTags']['NumberOfPatientRelatedSeries']) | |
| 9519 self.assertEqual('2', a[0]['RequestedTags']['NumberOfPatientRelatedInstances']) | |
| 9520 | |
| 9521 # Study level | |
| 9522 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 9523 'CaseSensitive' : False, | |
| 9524 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9525 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'ModalitiesInStudy', 'SOPClassesInStudy', 'NumberOfStudyRelatedInstances', 'NumberOfStudyRelatedSeries'], | |
| 9526 'Expand': True | |
| 9527 }) | |
| 9528 self.assertEqual(1, len(a)) | |
| 9529 | |
| 9530 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9531 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9532 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9533 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9534 self.assertEqual('2', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9535 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
| 9536 | |
| 9537 # Series level | |
| 9538 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', | |
| 9539 'CaseSensitive' : False, | |
| 9540 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9541 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'NumberOfSeriesRelatedInstances'], | |
| 9542 'Expand': True | |
| 9543 }) | |
| 9544 self.assertEqual(1, len(a)) | |
| 9545 | |
| 9546 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9547 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9548 self.assertEqual('2', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
| 9549 | |
| 9550 # Instance level | |
| 9551 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', | |
| 9552 'CaseSensitive' : False, | |
| 9553 'Query' : { 'PatientName' : 'BRAINIX' }, | |
| 9554 'RequestedTags' : [ 'PatientName', 'StudyInstanceUID', 'SOPInstanceUID', 'InstanceAvailability'], | |
| 9555 'Expand': True | |
| 9556 }) | |
| 9557 self.assertEqual(2, len(a)) | |
| 9558 | |
| 9559 self.assertEqual('BRAINIX', a[0]['RequestedTags']['PatientName']) | |
| 9560 self.assertEqual('2.16.840.1.113669.632.20.1211.10000357775', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9561 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
| 456 | 9562 |
|
452
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9563 def test_list_resources_requested_tags(self): |
|
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9564 |
| 471 | 9565 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9566 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9567 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9568 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9569 | |
| 9570 # list series and request tags that are not in the default main dicom tags | |
| 9571 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;Modality;SeriesInstanceUID;MRAcquisitionType' % study) | |
| 9572 | |
| 9573 self.assertEqual('2D', a[0]['RequestedTags']['MRAcquisitionType']) | |
| 9574 self.assertEqual('MR', a[0]['RequestedTags']['Modality']) | |
| 9575 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9576 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9577 | |
| 9578 # list studies and request patient and studies tags | |
| 9579 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID' % patient) | |
| 9580 | |
| 9581 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9582 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9583 | |
| 9584 | |
| 9585 # list instances and request patient, studies and series tags including tags that are not in main dicom tags | |
| 9586 a = DoGet(_REMOTE, '/patients/%s/instances?expand&simplify&requestedTags=PatientName;StudyInstanceUID;SeriesInstanceUID;SOPInstanceUID;Rows;Columns;InstanceAvailability' % patient) | |
| 9587 | |
| 9588 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9589 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9590 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a[0]['RequestedTags']['SOPInstanceUID']) | |
| 9591 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9592 self.assertEqual('512', a[0]['RequestedTags']['Rows']) | |
| 9593 self.assertEqual('512', a[0]['RequestedTags']['Columns']) | |
| 9594 self.assertEqual('ONLINE', a[0]['RequestedTags']['InstanceAvailability']) | |
|
452
45dd181b0f17
added test for requestedTags in tools/find + list-resources
Alain Mazy <am@osimis.io>
parents:
451
diff
changeset
|
9595 |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9596 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9597 def test_list_resources_requested_tags_study_computed_tags(self): |
|
452
45dd181b0f17
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
9598 |
| 471 | 9599 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9600 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9601 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9602 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9603 | |
| 9604 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9605 a = DoGet(_REMOTE, '/patients/%s/studies?expand&simplify&requestedTags=PatientName;StudyInstanceUID;ModalitiesInStudy;SOPClassesInStudy;NumberOfStudyRelatedInstances;NumberOfStudyRelatedSeries' % patient) | |
| 9606 | |
| 9607 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', a[0]['RequestedTags']['StudyInstanceUID']) | |
| 9608 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9609 self.assertEqual('MR', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 9610 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', a[0]['RequestedTags']['SOPClassesInStudy']) | |
| 9611 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedInstances']) | |
| 9612 self.assertEqual('1', a[0]['RequestedTags']['NumberOfStudyRelatedSeries']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9613 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9614 |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9615 def test_list_resources_requested_tags_series_computed_tags(self): |
|
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9616 |
| 471 | 9617 if IsOrthancVersionAbove(_REMOTE, 1, 11, 0): |
| 9618 instance = UploadInstance(_REMOTE, 'DummyCT.dcm') ['ID'] | |
| 9619 patient = DoGet(_REMOTE, '/instances/%s/patient' % instance) ['ID'] | |
| 9620 study = DoGet(_REMOTE, '/instances/%s/study' % instance) ['ID'] | |
| 9621 | |
| 9622 # list studies and request patient and studies tags, including ModalitiesInStudy | |
| 9623 a = DoGet(_REMOTE, '/studies/%s/series?expand&simplify&requestedTags=PatientName;SeriesInstanceUID;NumberOfSeriesRelatedInstances' % study) | |
| 9624 | |
| 9625 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', a[0]['RequestedTags']['SeriesInstanceUID']) | |
| 9626 self.assertEqual('KNIX', a[0]['RequestedTags']['PatientName']) | |
| 9627 self.assertEqual('1', a[0]['RequestedTags']['NumberOfSeriesRelatedInstances']) | |
|
453
46ae8fb09254
test computed tags for tools/find and list-resources
Alain Mazy <am@osimis.io>
parents:
452
diff
changeset
|
9628 |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9629 def test_dicomweb_jpeg2k_implicit(self): |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9630 # This is a file encoded using 1.2.840.10008.1.2.4.90 transfer |
| 457 | 9631 # syntax, in which most DICOM tags have the "UN" value |
|
455
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9632 # representation. Support introduced in Orthanc 1.10.1. |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9633 # https://groups.google.com/g/orthanc-users/c/86fobx3ZyoM/m/KBG17un6AQAJ |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9634 a = UploadInstance(_REMOTE, '2022-03-08-RicSmi.dcm') ['ID'] |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9635 b = DoGet(_REMOTE, '/instances/%s/file' % a, |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9636 headers = { 'Accept' : 'application/dicom+json' }) |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9637 self.assertEqual(b['0020000D']['Value'][0], '1.2.276.0.7230010.3.1.2.2358427580.3460.1646695830.793') |
|
f53cd250becc
test_dicomweb_jpeg2k_implicit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
449
diff
changeset
|
9638 self.assertEqual(b['0020000E']['Value'][0], '1.2.276.0.7230010.3.1.3.2358427580.3460.1646695830.794') |
|
488
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9639 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9640 def test_create_png16RBGA(self): |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9641 with open(GetDatabasePath('Png16RBGATest.png'), 'rb') as f: |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9642 png = f.read() |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9643 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9644 i = DoPost(_REMOTE, '/tools/create-dicom', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9645 json.dumps({ |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9646 'PatientName' : 'Jodogne', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9647 'Modality' : 'CT', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9648 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9649 'PixelData' : 'data:image/png;base64,' + base64.b64encode(png) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9650 })) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9651 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9652 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9653 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip()) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9654 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9655 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9656 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9657 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9658 png = GetImage(_REMOTE, '/instances/%s/rendered' % i['ID']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9659 self.assertEqual((32, 32), png.size) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9660 |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9661 j = DoGet(_REMOTE, i['Path']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9662 self.assertEqual('Instance', j['Type']) |
|
e904b2282b0e
Added support for RGBA64 images in tools/create-dicom and /preview (Contribution from James Manners - Pliny)
Alain Mazy <am@osimis.io>
parents:
486
diff
changeset
|
9663 self.assertEqual(j['ID'], i['ID']) |
|
501
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9664 |
|
1b1bb8621021
/store: allows overriding CalledAet, Host, Port
Alain Mazy <am@osimis.io>
parents:
500
diff
changeset
|
9665 def test_storescu_custom_host_ip_port(self): |
| 510 | 9666 if IsOrthancVersionAbove(_REMOTE, 1, 11, 3): |
| 9667 DropOrthanc(_LOCAL) | |
| 9668 DropOrthanc(_REMOTE) | |
| 9669 | |
| 9670 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm') | |
| 9671 | |
| 9672 # upload to self -> orthanctest shall not receive any content | |
| 9673 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9674 'Resources' : [ a['ID']] | |
| 9675 }) | |
| 9676 self.assertEqual(0, len(DoGet(_LOCAL, '/instances'))) | |
| 9677 | |
| 9678 # upload to self by overriding it with config from orthanctest -> orthanctest shall receive the content | |
| 9679 c = DoGet(_REMOTE, '/modalities/orthanctest/configuration') | |
| 9680 DoPost(_REMOTE, '/modalities/self/store', { | |
| 9681 'LocalAet' : 'YOP', | |
| 9682 'CalledAet' : c['AET'], | |
| 9683 'Port' : c['Port'], | |
| 9684 'Host' : c['Host'], | |
| 9685 'Resources' : [ a['ID']] | |
| 9686 }) | |
| 9687 | |
| 9688 self.assertEqual(1, len(DoGet(_LOCAL, '/instances'))) | |
| 9689 | |
| 9690 DropOrthanc(_REMOTE) | |
| 9691 DropOrthanc(_LOCAL) | |
|
503
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9692 |
|
138d5efd4407
added test_rle_planar_configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
502
diff
changeset
|
9693 def test_rle_planar_configuration(self): |
| 531 | 9694 if IsOrthancVersionAbove(_REMOTE, 1, 11, 2): |
| 9695 # https://groups.google.com/g/orthanc-users/c/CSVWfRasSR0/m/y1XDRXVnAgAJ | |
| 9696 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
| 9697 uri = '/instances/%s/preview' % a | |
| 9698 im = GetImage(_REMOTE, uri) | |
| 9699 self.assertEqual('RGB', im.mode) | |
| 9700 self.assertEqual(1475, im.size[0]) | |
| 9701 self.assertEqual(1475, im.size[1]) | |
| 9702 self.assertEqual('c684b0050dc2523041240bf2d26dc85e', ComputeMD5(DoGet(_REMOTE, uri))) | |
| 9703 | |
| 9704 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): | |
| 9705 a = UploadInstance(_REMOTE, '2023-04-21-RLEPlanarConfigurationYBR_FULL.dcm') ['ID'] | |
| 9706 uri = '/instances/%s/preview' % a | |
| 9707 im = GetImage(_REMOTE, uri) | |
| 9708 self.assertEqual('RGB', im.mode) | |
| 9709 self.assertEqual(1260, im.size[0]) | |
| 9710 self.assertEqual(910, im.size[1]) | |
| 9711 self.assertEqual('07a3ea7ea08d54362f744cc5945e8743', ComputeMD5(DoGet(_REMOTE, uri))) | |
| 9712 | |
| 512 | 9713 |
| 9714 def test_rest_api_write_to_file_system(self): | |
| 9715 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): | |
| 9716 a = UploadInstance(_REMOTE, '2022-11-14-RLEPlanarConfiguration.dcm') ['ID'] | |
| 9717 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/instances/%s/export' % a, '/tmp/test.dcm')) | |
| 513 | 9718 |
|
515
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9719 def test_overwrite_generates_stable_study(self): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9720 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9721 # This test makes sure there are no regression wrt StableStudy when uploading instances in Orthanc |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9722 # The current behaviour (tested from 1.5.7 to 1.12.0) is |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9723 # If you upload 2 instances with a delay > StableAge, you get 2 StableStudy events and they are both listed in /changes |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9724 # If you upload twice the same instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9725 # If you upload an instance and a modified version of this instance with a delay > StableAge, you get 2 StableStudy events but only the last one is listed in /changes, the first one is deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9726 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9727 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9728 def GetAllStableStudyChangesIds(studyId, timeout): |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9729 # try to be as fast as possible -> stop as soon as we've found a StableStudy event that appeared after we started monitoring |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9730 fromSeq = DoGet(_REMOTE, '/changes')["Last"] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9731 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9732 endTime = time.time() + timeout |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9733 newStableStudyFound = False |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9734 while not newStableStudyFound and time.time() < endTime: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9735 time.sleep(0.1) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9736 changes = DoGet(_REMOTE, '/changes') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9737 stableStudyChangesIds = [] |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9738 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9739 for change in changes["Changes"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9740 if change["ChangeType"] == "StableStudy" and studyId == change["ID"]: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9741 stableStudyChangesIds.append(change["Seq"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9742 if change["Seq"] > fromSeq: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9743 newStableStudyFound = True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9744 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9745 return stableStudyChangesIds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9746 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9747 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9748 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9749 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9750 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9751 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9752 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9753 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9754 # upload the same instance again and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9755 upload1b = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9756 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9757 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9758 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9759 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9760 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9761 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9762 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9763 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9764 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9765 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9766 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9767 # reupload a modified instance in the same study and check a new change has been generated with a new id, the first change has been deleted |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9768 modified = DoPost(_REMOTE, '/instances/%s/modify' % upload1["ID"], |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9769 json.dumps({ |
|
5dca7ef42156
added a non-regression test wrt StableStudy
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parents:
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diff
changeset
|
9770 "Replace" : { |
|
5dca7ef42156
added a non-regression test wrt StableStudy
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parents:
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diff
changeset
|
9771 "InstitutionName" : "hello", |
|
5dca7ef42156
added a non-regression test wrt StableStudy
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parents:
512
diff
changeset
|
9772 "SOPInstanceUID": "1.2.840.113619.2.176.2025.1499492.7040.1171286241.705" |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9773 }, |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9774 "Force": True |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9775 }), |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9776 'application/json') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9777 upload1b = DoPost(_REMOTE, '/instances', modified, 'application/dicom') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9778 changes1b = GetAllStableStudyChangesIds(upload1b["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9779 self.assertEqual(upload1["ParentStudy"], upload1b["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9780 self.assertEqual(1, len(changes1b)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9781 self.assertNotEqual(changes1[0], changes1b[0]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9782 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9783 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9784 if True: |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9785 DropOrthanc(_REMOTE) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9786 upload1 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9787 # StableAge is set to 1, expect a StableStudy within 4 seconds |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9788 changes1 = GetAllStableStudyChangesIds(upload1["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9789 self.assertEqual(1, len(changes1)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9790 |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9791 # upload a new instance in the same study and check a second StableStudy change has been generated with a new id |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9792 upload2 = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm') |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9793 changes2 = GetAllStableStudyChangesIds(upload2["ParentStudy"], 4) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9794 self.assertEqual(upload1["ParentStudy"], upload2["ParentStudy"]) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9795 self.assertEqual(2, len(changes2)) |
|
5dca7ef42156
added a non-regression test wrt StableStudy
Alain Mazy <am@osimis.io>
parents:
512
diff
changeset
|
9796 self.assertEqual(changes1[0], changes2[0]) |
| 516 | 9797 |
| 513 | 9798 def test_labels(self): |
| 523 | 9799 def CheckAllLabels(expected): |
| 9800 actual = DoGet(_REMOTE, '/tools/labels') | |
| 9801 self.assertEqual(len(actual), len(expected)) | |
| 9802 for i in expected: | |
| 9803 self.assertTrue(i in actual) | |
| 9804 for i in actual: | |
| 9805 self.assertTrue(i in expected) | |
| 9806 | |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9807 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9808 DoGet(_REMOTE, '/system') ['HasLabels']): |
| 513 | 9809 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
| 9810 patient = DoGet(_REMOTE, '/instances/%s/patient' % u) ['ID'] | |
| 9811 study = DoGet(_REMOTE, '/instances/%s/study' % u) ['ID'] | |
| 9812 series = DoGet(_REMOTE, '/instances/%s/series' % u) ['ID'] | |
| 9813 | |
| 9814 for base in [ '/instances/%s' % u, | |
| 9815 '/series/%s' % series, | |
| 9816 '/studies/%s' % study, | |
|
519
b1991073e4d1
test alphanumeric labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
518
diff
changeset
|
9817 '/patients/%s' % patient ]: |
| 521 | 9818 |
| 9819 # no tags by default | |
| 513 | 9820 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 523 | 9821 CheckAllLabels([]) |
| 521 | 9822 |
| 9823 # 404 if requesting a tag that does apply for a resource | |
| 513 | 9824 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9825 |
| 9826 # delete a non existing tag does not generate an error | |
| 513 | 9827 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 9828 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 521 | 9829 |
| 9830 # Not an alphanumeric label -> 400 | |
| 9831 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '%s/labels/@' % base)) | |
| 9832 | |
| 9833 # add a tag | |
| 513 | 9834 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9835 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9836 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 523 | 9837 CheckAllLabels([ 'hello' ]) |
| 521 | 9838 |
| 9839 # double tagging does not generate any error | |
| 9840 self.assertEqual('', DoPut(_REMOTE, '%s/labels/hello' % base)) | |
| 9841 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 9842 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) | |
| 9843 self.assertEqual('hello', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9844 | |
| 9845 # add a second tag | |
| 9846 self.assertEqual('', DoPut(_REMOTE, '%s/labels/world' % base)) | |
| 9847 self.assertEqual('', DoGet(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9848 self.assertEqual('', DoGet(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9849 self.assertEqual(2, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9850 self.assertIn(DoGet(_REMOTE, base) ['Labels'][0], ['hello', 'world']) | |
| 9851 self.assertIn(DoGet(_REMOTE, base) ['Labels'][1], ['hello', 'world']) | |
| 523 | 9852 CheckAllLabels([ 'hello', 'world' ]) |
| 521 | 9853 |
| 9854 # delete the first tag | |
| 513 | 9855 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/hello' % base)) |
| 521 | 9856 self.assertEqual(1, len(DoGet(_REMOTE, base) ['Labels'])) |
| 9857 self.assertEqual('world', DoGet(_REMOTE, base) ['Labels'][0]) | |
| 9858 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/hello' % base)) | |
| 523 | 9859 CheckAllLabels([ 'world' ]) |
| 521 | 9860 |
| 9861 # delete the second tag | |
| 9862 self.assertEqual('', DoDelete(_REMOTE, '%s/labels/world' % base)) | |
| 513 | 9863 self.assertEqual(0, len(DoGet(_REMOTE, base) ['Labels'])) |
| 521 | 9864 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '%s/labels/world' % base)) |
| 523 | 9865 CheckAllLabels([ ]) |
| 521 | 9866 |
| 9867 # test all valid chars | |
| 523 | 9868 VALID = r'abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789_-' |
| 9869 self.assertEqual('', DoPut(_REMOTE, '%s/labels/%s' % (base, VALID))) | |
| 9870 CheckAllLabels([ VALID ]) | |
| 9871 DoDelete(_REMOTE, '%s/labels/%s' % (base, VALID)) | |
| 9872 CheckAllLabels([ ]) | |
| 9873 | |
|
517
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9874 else: |
|
692f2956ddab
test HasLabels in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
516
diff
changeset
|
9875 print("Your database backend doesn't support labels") |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9876 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9877 def test_find_labels(self): |
| 548 | 9878 def Execute(labels, constraint, query = { }, level='Instance'): |
| 9879 return DoPost(_REMOTE, '/tools/find', { 'Level' : level, | |
| 525 | 9880 'Query' : query, |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9881 'Labels' : labels, |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9882 'LabelsConstraint' : constraint, }) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9883 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9884 if (IsOrthancVersionAbove(_REMOTE, 1, 12, 0) and |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9885 DoGet(_REMOTE, '/system') ['HasLabels']): |
| 548 | 9886 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
| 9887 studyId = u["ParentStudy"] | |
| 9888 seriesId = u["ParentSeries"] | |
| 9889 patientId = u["ParentPatient"] | |
| 9890 u = u["ID"] | |
| 9891 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9892 |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9893 # The instance has no label |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9894 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9895 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9896 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9897 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9898 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9899 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9900 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9901 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9902 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9903 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9904 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9905 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9906 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9907 DoPut(_REMOTE, '/instances/%s/labels/a' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9908 # The instance has label "a" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9909 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9910 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9911 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9912 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9913 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9914 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9915 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9916 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9917 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9918 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9919 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9920 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9921 |
| 525 | 9922 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'PatientID' : 'nope' }))) |
| 9923 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : '' }))) | |
| 9924 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
| 9925 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '' }))) | |
| 9926 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
| 9927 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
| 9928 self.assertEqual(0, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
| 9929 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '' }))) | |
| 9930 | |
| 9931 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
| 9932 | |
| 9933 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
| 9934 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
| 9935 self.assertEqual(1, len(Execute([ 'a' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
| 9936 self.assertEqual(1, len(Execute([ 'a' ], 'All', { | |
| 9937 'PatientID' : 'ozp00SjY2xG', | |
| 9938 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 9939 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 9940 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 9941 }))) | |
| 9942 | |
| 9943 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'nope' }))) | |
| 9944 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : '' }))) | |
| 9945 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : 'nope' }))) | |
| 9946 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '' }))) | |
| 9947 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : 'nope' }))) | |
| 9948 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '' }))) | |
| 9949 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : 'nope' }))) | |
| 9950 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '' }))) | |
| 9951 | |
| 9952 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'PatientID' : 'ozp00SjY2xG' }))) | |
| 9953 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' }))) | |
| 9954 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' }))) | |
| 9955 self.assertEqual(0, len(Execute([ 'b' ], 'All', { 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' }))) | |
| 9956 self.assertEqual(0, len(Execute([ 'b' ], 'All', { | |
| 9957 'PatientID' : 'ozp00SjY2xG', | |
| 9958 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', | |
| 9959 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', | |
| 9960 'SOPInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', | |
| 9961 }))) | |
| 9962 | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9963 DoPut(_REMOTE, '/instances/%s/labels/b' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9964 # The instance has labels "a" and "b" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9965 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9966 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9967 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9968 self.assertEqual(1, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9969 self.assertEqual(1, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9970 self.assertEqual(0, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9971 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9972 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9973 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9974 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9975 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9976 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
| 524 | 9977 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'All'))) |
| 9978 self.assertEqual(1, len(Execute([ 'b', 'c' ], 'Any'))) | |
| 9979 self.assertEqual(0, len(Execute([ 'b', 'c' ], 'None'))) | |
| 9980 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'All'))) | |
| 9981 self.assertEqual(0, len(Execute([ 'c', 'd' ], 'Any'))) | |
| 9982 self.assertEqual(1, len(Execute([ 'c', 'c' ], 'None'))) | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9983 |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
9984 DoDelete(_REMOTE, '/instances/%s/labels/a' % u) |
|
522
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9985 # The instance has label "b" |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9986 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9987 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9988 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9989 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9990 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9991 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9992 self.assertEqual(1, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9993 self.assertEqual(1, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9994 self.assertEqual(0, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9995 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9996 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9997 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9998 |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
9999 DoDelete(_REMOTE, '/instances/%s/labels/b' % u) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10000 # The instance has no more label |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10001 self.assertEqual(1, len(Execute([], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10002 self.assertEqual(1, len(Execute([], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10003 self.assertEqual(1, len(Execute([], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10004 self.assertEqual(0, len(Execute([ 'a' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10005 self.assertEqual(0, len(Execute([ 'a' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10006 self.assertEqual(1, len(Execute([ 'a' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10007 self.assertEqual(0, len(Execute([ 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10008 self.assertEqual(0, len(Execute([ 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10009 self.assertEqual(1, len(Execute([ 'b' ], 'None'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10010 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'All'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10011 self.assertEqual(0, len(Execute([ 'a', 'b' ], 'Any'))) |
|
fce9e90acdc2
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
521
diff
changeset
|
10012 self.assertEqual(1, len(Execute([ 'a', 'b' ], 'None'))) |
| 548 | 10013 |
| 10014 | |
| 10015 # tests at series levels (make sure to test only with series levels and with multiple levels) | |
| 10016 DoPut(_REMOTE, '/series/%s/labels/b' % seriesId) | |
| 10017 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10018 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10019 }, 'Series'))) | |
| 10020 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10021 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10022 }, 'Series'))) | |
| 10023 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10024 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10025 }, 'Series'))) | |
| 10026 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10027 'SeriesInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394' | |
| 10028 }, 'Series'))) | |
| 10029 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10030 'PatientID' : 'ozp00SjY2xG', | |
| 10031 }, 'Series'))) | |
| 10032 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10033 'PatientID' : 'ozp00SjY2xG', | |
| 10034 }, 'Series'))) | |
| 10035 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10036 'PatientID' : 'ozp00SjY2xG', | |
| 10037 }, 'Series'))) | |
| 10038 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10039 'PatientID' : 'ozp00SjY2xG', | |
| 10040 }, 'Series'))) | |
| 10041 | |
| 10042 # tests at study levels (make sure to test only with study levels and with multiple levels) | |
| 10043 DoPut(_REMOTE, '/studies/%s/labels/b' % studyId) | |
| 10044 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10045 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10046 }, 'Study'))) | |
| 10047 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10048 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10049 }, 'Study'))) | |
| 10050 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10051 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10052 }, 'Study'))) | |
| 10053 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10054 'StudyInstanceUID' : '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390' | |
| 10055 }, 'Study'))) | |
| 10056 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10057 'PatientID' : 'ozp00SjY2xG', | |
| 10058 }, 'Study'))) | |
| 10059 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10060 'PatientID' : 'ozp00SjY2xG', | |
| 10061 }, 'Study'))) | |
| 10062 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10063 'PatientID' : 'ozp00SjY2xG', | |
| 10064 }, 'Study'))) | |
| 10065 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10066 'PatientID' : 'ozp00SjY2xG', | |
| 10067 }, 'Study'))) | |
| 10068 | |
| 10069 # tests at patient levels | |
| 10070 DoPut(_REMOTE, '/patients/%s/labels/b' % patientId) | |
| 10071 self.assertEqual(1, len(Execute([ 'a' ], 'None', { | |
| 10072 'PatientID' : 'ozp00SjY2xG', | |
| 10073 }, 'Patient'))) | |
| 10074 self.assertEqual(0, len(Execute([ 'a' ], 'Any', { | |
| 10075 'PatientID' : 'ozp00SjY2xG', | |
| 10076 }, 'Patient'))) | |
| 10077 self.assertEqual(1, len(Execute([ 'b' ], 'Any', { | |
| 10078 'PatientID' : 'ozp00SjY2xG', | |
| 10079 }, 'Patient'))) | |
| 10080 self.assertEqual(1, len(Execute([ 'b' ], 'All', { | |
| 10081 'PatientID' : 'ozp00SjY2xG', | |
| 10082 }, 'Patient'))) | |
| 10083 | |
|
518
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
10084 else: |
|
43a323de0b02
added test_find_labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
517
diff
changeset
|
10085 print("Your database backend doesn't support labels") |
|
527
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10086 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10087 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10088 def test_numeric_metadata(self): |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10089 if IsOrthancVersionAbove(_REMOTE, 1, 12, 0): |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10090 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID'] |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10091 study = DoGet(_REMOTE, '/instances/%s/study' % instance)['ID'] |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10092 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10093 m = DoGet(_REMOTE, '/studies/%s/metadata' % study) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10094 self.assertEqual(2, len(m)) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10095 self.assertTrue('LastUpdate' in m) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10096 self.assertTrue('MainDicomTagsSignature' in m) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10097 lastUpdate = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'LastUpdate')) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10098 signature = DoGet(_REMOTE, '/studies/%s/metadata/%s' % (study, 'MainDicomTagsSignature')) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10099 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10100 m = DoGet(_REMOTE, '/studies/%s/metadata?numeric' % study) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10101 self.assertEqual(2, len(m)) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10102 self.assertTrue(7 in m) # MetadataType_LastUpdate |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10103 self.assertTrue(15 in m) # MetadataType_MainDicomTagsSignature |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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526
diff
changeset
|
10104 self.assertEqual(lastUpdate, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 7))) |
|
86456045ac80
added test_numeric_metadata
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526
diff
changeset
|
10105 self.assertEqual(signature, DoGet(_REMOTE, '/studies/%s/metadata/%d' % (study, 15))) |
|
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added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
10106 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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526
diff
changeset
|
10107 m = DoGet(_REMOTE, '/studies/%s/metadata?expand' % study) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
10108 self.assertEqual(2, len(m)) |
|
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added test_numeric_metadata
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526
diff
changeset
|
10109 self.assertTrue('LastUpdate' in m) |
|
86456045ac80
added test_numeric_metadata
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parents:
526
diff
changeset
|
10110 self.assertTrue('MainDicomTagsSignature' in m) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10111 self.assertEqual(lastUpdate, m['LastUpdate']) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10112 self.assertEqual(signature, m['MainDicomTagsSignature']) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10113 |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10114 m = DoGet(_REMOTE, '/studies/%s/metadata?expand&numeric' % study) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10115 self.assertEqual(2, len(m)) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10116 self.assertTrue('7' in m) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10117 self.assertTrue('15' in m) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10118 self.assertEqual(lastUpdate, m['7']) |
|
86456045ac80
added test_numeric_metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
526
diff
changeset
|
10119 self.assertEqual(signature, m['15']) |
|
535
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10120 |
|
584
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10121 def test_expand(self): |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10122 # test new expand options introduced in 1.12.2 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10123 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10124 r = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10125 instanceId = r['ID'] |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10126 seriesId = r['ParentSeries'] |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10127 studyId = r['ParentStudy'] |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10128 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10129 self.assertEqual(DoGet(_REMOTE, '/instances?expand'), DoGet(_REMOTE, '/instances?expand=true')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10130 self.assertEqual(DoGet(_REMOTE, '/instances'), DoGet(_REMOTE, '/instances?expand=false')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10131 |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10132 self.assertEqual(DoGet(_REMOTE, '/series?expand'), DoGet(_REMOTE, '/series?expand=true')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10133 self.assertEqual(DoGet(_REMOTE, '/series'), DoGet(_REMOTE, '/series?expand=false')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10134 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10135 self.assertEqual(DoGet(_REMOTE, '/studies?expand'), DoGet(_REMOTE, '/studies?expand=true')) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10136 self.assertEqual(DoGet(_REMOTE, '/studies'), DoGet(_REMOTE, '/studies?expand=false')) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10137 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10138 r = DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10139 self.assertEqual(1, len(r)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10140 self.assertIn('MainDicomTags', r[0]) |
|
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new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10141 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10142 r = DoGet(_REMOTE, '/studies/%s/instances?expand=false' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10143 self.assertEqual(1, len(r)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10144 self.assertIn('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', r[0]) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10145 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10146 self.assertEqual(DoGet(_REMOTE, '/studies/%s/instances?expand' % studyId), DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10147 self.assertEqual(DoGet(_REMOTE, '/studies/%s/instances' % studyId), DoGet(_REMOTE, '/studies/%s/instances?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10148 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10149 r = DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10150 self.assertEqual(1, len(r)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10151 self.assertIn('MainDicomTags', r[0]) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10152 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10153 r = DoGet(_REMOTE, '/studies/%s/series?expand=false' % studyId) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10154 self.assertEqual(1, len(r)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10155 self.assertIn('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', r[0]) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10156 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10157 self.assertEqual(DoGet(_REMOTE, '/studies/%s/series?expand' % studyId), DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10158 self.assertEqual(DoGet(_REMOTE, '/studies/%s/series' % studyId), DoGet(_REMOTE, '/studies/%s/series?expand=true' % studyId)) |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10159 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10160 |
|
c4f4b0bc908b
new tests for new expand GET arguments
Alain Mazy <am@osimis.io>
parents:
583
diff
changeset
|
10161 |
|
535
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10162 def test_add_attachment_to_non_existing_resource(self): |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10163 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): # till 1.12.0, it returned a 200 |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10164 (headers, body) = DoPutRaw(_REMOTE, '/instances/11111111-11111111-11111111-11111111-11111111/attachments/1025', 'hello') |
|
31f70bfd86a7
Fix orphan files remaining in storage when working with MaximumStorageSize
Alain Mazy <am@osimis.io>
parents:
533
diff
changeset
|
10165 self.assertEqual('404', headers['status']) |
|
538
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10166 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10167 def test_delete_updates_parents_last_update_metadata(self): |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10168 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10169 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm') |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10170 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm') |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10171 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10172 #instanceLastUpdate1 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10173 seriesLastUpdate1 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10174 studyLastUpdate1 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10175 patientLastUpdate1 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10176 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10177 time.sleep(1.01) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10178 DoDelete(_REMOTE, '/instances/%s' % j['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10179 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10180 #instanceLastUpdate2 = DoGet(_REMOTE, '/instances/%s/metadata/LastUpdate' % i['ID']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10181 seriesLastUpdate2 = DoGet(_REMOTE, '/series/%s/metadata/LastUpdate' % i['ParentSeries']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10182 studyLastUpdate2 = DoGet(_REMOTE, '/studies/%s/metadata/LastUpdate' % i['ParentStudy']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10183 patientLastUpdate2 = DoGet(_REMOTE, '/patients/%s/metadata/LastUpdate' % i['ParentPatient']) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10184 |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10185 #self.assertEqual(instanceLastUpdate1, instanceLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10186 self.assertNotEqual(seriesLastUpdate1, seriesLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10187 self.assertNotEqual(studyLastUpdate1, studyLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10188 self.assertNotEqual(patientLastUpdate1, patientLastUpdate2) |
|
7a83a8f087c7
LastUpdate when deleting resources
Alain Mazy <am@osimis.io>
parents:
535
diff
changeset
|
10189 |
|
554
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10190 def test_pixel_data_vr(self): |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10191 def Check(path, hasPixelData, hasMetadata, expectedVR): |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10192 i = UploadInstance(_REMOTE, path) ['ID'] |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10193 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10194 if hasMetadata: |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10195 self.assertTrue('PixelDataVR' in m) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10196 self.assertEqual(expectedVR, m['PixelDataVR']) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10197 else: |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10198 self.assertFalse('PixelDataVR' in m) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10199 |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10200 if hasPixelData: |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10201 self.assertTrue('PixelDataOffset' in m) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10202 j = DoGet(_REMOTE, '/instances/%s/file?expand' % i, headers = { |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10203 'Accept': 'application/dicom+json' |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10204 }) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10205 self.assertEqual(expectedVR, j['7FE00010']['vr']) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10206 |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10207 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10208 # File without pixel data |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10209 Check('MarekLatin2.dcm', False, False, None) |
|
ede184638961
added test_pixel_data_vr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
548
diff
changeset
|
10210 |
|
ede184638961
added test_pixel_data_vr
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diff
changeset
|
10211 # Those files are badly formatted, and should be 'OB' |
|
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diff
changeset
|
10212 # according to the DICOM standard => medata is present |
|
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diff
changeset
|
10213 Check('Issue143.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
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added test_pixel_data_vr
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548
diff
changeset
|
10214 Check('KarstenHilbertRF.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
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added test_pixel_data_vr
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parents:
548
diff
changeset
|
10215 Check('PilatesArgenturGEUltrasoundOsiriX.dcm', True, True, 'OW') # Little Endian Explicit, 8bpp |
|
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added test_pixel_data_vr
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diff
changeset
|
10216 |
|
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added test_pixel_data_vr
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diff
changeset
|
10217 # Those files are formatted as expected |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10218 Check('ColorTestMalaterre.dcm', True, False, 'OW') # Implicit Little Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10219 Check('Issue94.dcm', True, False, 'OW') # Implicit Little Endian, 16bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10220 Check('TransferSyntaxes/1.2.840.10008.1.2.1.dcm', True, False, 'OB') # Explicit Little Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10221 Check('Phenix/IM-0001-0001.dcm', True, False, 'OW') # Explicit Little Endian, 16bpp |
|
ede184638961
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parents:
548
diff
changeset
|
10222 Check('TransferSyntaxes/1.2.840.10008.1.2.2.dcm', True, False, 'OB') # Explicit Big Endian, 8bpp |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10223 Check('TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm', True, False, 'OB') # JPEG |
|
ede184638961
added test_pixel_data_vr
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parents:
548
diff
changeset
|
10224 Check('Knee/T1/IM-0001-0001.dcm', True, False, 'OB') # JPEG2k |
|
565
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diff
changeset
|
10225 |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10226 def test_encapsulate_stl(self): |
|
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diff
changeset
|
10227 if IsOrthancVersionAbove(_REMOTE, 1, 12, 1): |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10228 stl = b'Hello, world' |
|
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diff
changeset
|
10229 |
|
855c3720902a
added test_encapsulate_stl
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parents:
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diff
changeset
|
10230 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10231 'Content' : 'data:model/stl;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
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diff
changeset
|
10232 'Force' : True, |
|
855c3720902a
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diff
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|
10233 'Tags' : { |
|
855c3720902a
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diff
changeset
|
10234 'PatientName' : 'Jodogne' |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10235 } |
|
855c3720902a
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diff
changeset
|
10236 })) ['ID'] |
|
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diff
changeset
|
10237 |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10238 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
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diff
changeset
|
10239 self.assertEqual('Jodogne', tags['PatientName']) |
|
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added test_encapsulate_stl
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diff
changeset
|
10240 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10241 self.assertEqual('model/stl', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
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diff
changeset
|
10242 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.3', tags['SOPClassUID']) |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10243 |
|
855c3720902a
added test_encapsulate_stl
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parents:
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diff
changeset
|
10244 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10245 'Content' : 'data:model/mtl;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10246 'Tags' : {} |
|
855c3720902a
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557
diff
changeset
|
10247 })) ['ID'] |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10248 |
|
855c3720902a
added test_encapsulate_stl
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parents:
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diff
changeset
|
10249 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
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parents:
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diff
changeset
|
10250 self.assertFalse('PatientName' in tags) |
|
855c3720902a
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diff
changeset
|
10251 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10252 self.assertEqual('model/mtl', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
added test_encapsulate_stl
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diff
changeset
|
10253 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.5', tags['SOPClassUID']) |
|
855c3720902a
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parents:
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diff
changeset
|
10254 |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10255 i = DoPost(_REMOTE, '/tools/create-dicom', json.dumps({ |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10256 'Content' : 'data:model/obj;base64,%s' % base64.b64encode(stl).decode(), |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10257 'Tags' : {} |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10258 })) ['ID'] |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10259 |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10260 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i) |
|
855c3720902a
added test_encapsulate_stl
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
557
diff
changeset
|
10261 self.assertFalse('PatientName' in tags) |
|
855c3720902a
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parents:
557
diff
changeset
|
10262 self.assertEqual('M3D', tags['Modality']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10263 self.assertEqual('model/obj', tags['MIMETypeOfEncapsulatedDocument']) |
|
855c3720902a
added test_encapsulate_stl
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parents:
557
diff
changeset
|
10264 self.assertEqual('1.2.840.10008.5.1.4.1.1.104.4', tags['SOPClassUID']) |
| 591 | 10265 |
| 10266 | |
| 10267 def test_error_codes_content_type(self): | |
| 10268 | |
| 10269 # from 1.12.2, check that a ContentType header is included in errors with an error description (ex: 404) | |
| 10270 (headers, body) = DoGetRaw(_REMOTE, '/rnm94%3Cscript%3Ealert(1)%3C/script%3Ejdtkc/explorer.html') | |
| 10271 self.assertEqual('404', headers['status']) | |
| 10272 | |
| 10273 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
|
595
b6c1f0c9ca15
fix test_error_codes_content_type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
591
diff
changeset
|
10274 self.assertEqual('text/plain', headers['content-type']) |
| 591 | 10275 |
| 10276 (headers, body) = DoPutRaw(_REMOTE, '/system', 'hello') | |
| 10277 self.assertEqual('405', headers['status']) | |
| 10278 # when there is no body, there is no content-type | |
| 10279 self.assertNotIn('content-type', headers) | |
| 10280 | |
| 10281 # responses with bodies contain x-content-type-options | |
| 10282 if IsOrthancVersionAbove(_REMOTE, 1, 12, 2): | |
| 10283 (headers, body) = DoGetRaw(_REMOTE, '/system') | |
| 10284 self.assertIn('nosniff', headers['x-content-type-options']) | |
| 603 | 10285 |
| 10286 def test_modify_with_labels(self): | |
| 10287 | |
| 606 | 10288 if DoGet(_REMOTE, '/system')['ApiVersion'] < 23 or not DoGet(_REMOTE, '/system')['HasLabels']: |
| 10289 return | |
| 10290 | |
| 603 | 10291 def UploadAndLabel(testId): |
| 10292 DropOrthanc(_REMOTE) | |
| 10293 | |
| 10294 u = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm') | |
| 10295 studyId = u["ParentStudy"] | |
| 10296 seriesId = u["ParentSeries"] | |
| 10297 patientId = u["ParentPatient"] | |
| 10298 instanceId = u["ID"] | |
| 10299 | |
| 10300 if testId == 2: # multi instance study | |
| 10301 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm') | |
| 10302 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm') | |
| 10303 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm') | |
| 10304 | |
| 10305 # add a label to the study before modification | |
| 10306 DoPut(_REMOTE, '/patients/%s/labels/label-patient' % patientId) | |
| 10307 DoPut(_REMOTE, '/studies/%s/labels/label-study' % studyId) | |
| 10308 DoPut(_REMOTE, '/series/%s/labels/label-series' % seriesId) | |
| 10309 DoPut(_REMOTE, '/instances/%s/labels/label-instance' % instanceId) | |
| 10310 | |
| 10311 originalPatient = DoGet(_REMOTE, '/patients/%s' % patientId) | |
| 10312 self.assertEqual(1, len(originalPatient["Labels"])) | |
| 10313 self.assertIn('label-patient', originalPatient["Labels"]) | |
| 10314 | |
| 10315 originalStudy = DoGet(_REMOTE, '/studies/%s' % studyId) | |
| 10316 self.assertEqual(1, len(originalStudy["Labels"])) | |
| 10317 self.assertIn('label-study', originalStudy["Labels"]) | |
| 10318 | |
| 10319 originalSeries = DoGet(_REMOTE, '/series/%s' % seriesId) | |
| 10320 self.assertEqual(1, len(originalSeries["Labels"])) | |
| 10321 self.assertIn('label-series', originalSeries["Labels"]) | |
| 10322 | |
| 10323 originalInstance = DoGet(_REMOTE, '/instances/%s' % instanceId) | |
| 10324 self.assertEqual(1, len(originalInstance["Labels"])) | |
| 10325 self.assertIn('label-instance', originalInstance["Labels"]) | |
| 10326 | |
| 10327 return originalPatient, originalStudy, originalSeries, originalInstance | |
| 10328 | |
| 10329 | |
| 10330 for testId in range(1, 2): #test with a single instance study and a multi instance study | |
| 10331 | |
| 10332 originalPatient, originalStudy, originalSeries, originalInstance = UploadAndLabel(testId) | |
| 10333 | |
| 10334 # modify a study in place with no label field in the payload (default behavior before 1.12.3) | |
| 10335 DoPost(_REMOTE, '/studies/%s/modify' % originalStudy['ID'], { | |
| 10336 'Keep' : ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], | |
| 10337 'Replace' : { | |
| 10338 'PatientName': 'modified' | |
| 10339 }, | |
| 10340 'Force': True | |
| 10341 }) | |
| 10342 | |
| 10343 # with no options, all resources lose their labels during the modification | |
| 10344 modifiedStudy = DoGet(_REMOTE, '/studies/%s' % originalStudy['ID']) | |
| 10345 self.assertEqual(0, len(modifiedStudy["Labels"])) | |
| 10346 self.assertEqual('modified', modifiedStudy["PatientMainDicomTags"]["PatientName"]) | |
| 10347 | |
| 605 | 10348 if IsOrthancVersionAbove(_REMOTE, 1, 12, 3) and DoGet(_REMOTE, '/system')['ApiVersion'] >= 23 and DoGet(_REMOTE, '/system')['HasLabels']: |
| 603 | 10349 for testId in range(1, 2): #test with a single instance study and a multi instance study |
| 10350 | |
| 10351 originalPatient, originalStudy, originalSeries, originalInstance = UploadAndLabel(testId) | |
| 10352 | |
| 10353 # modify a study in place with no label field in the payload (default behavior before 1.12.3) | |
| 10354 DoPost(_REMOTE, '/studies/%s/modify' % originalStudy['ID'], { | |
| 10355 'Keep' : ['StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID'], | |
| 10356 'Replace' : { | |
| 10357 'PatientName': 'modified2' | |
| 10358 }, | |
| 10359 'Force': True, | |
| 10360 'KeepLabels': True | |
| 10361 }) | |
| 10362 | |
| 10363 # now, each resource level shall have kept its labels | |
| 10364 | |
| 10365 modifiedInstance = DoGet(_REMOTE, '/instances/%s' % originalInstance['ID']) | |
| 10366 self.assertEqual(1, len(modifiedInstance["Labels"])) | |
| 10367 self.assertIn('label-instance', modifiedInstance["Labels"]) | |
| 10368 | |
| 10369 modifiedSeries = DoGet(_REMOTE, '/series/%s' % originalSeries['ID']) | |
| 10370 self.assertEqual(1, len(modifiedSeries["Labels"])) | |
| 10371 self.assertIn('label-series', modifiedSeries["Labels"]) | |
| 10372 | |
| 10373 modifiedStudy = DoGet(_REMOTE, '/studies/%s' % originalStudy['ID']) | |
| 10374 self.assertEqual(1, len(modifiedStudy["Labels"])) | |
| 10375 self.assertIn('label-study', modifiedStudy["Labels"]) | |
| 10376 self.assertEqual('modified2', modifiedStudy["PatientMainDicomTags"]["PatientName"]) | |
| 10377 | |
| 10378 modifiedPatient = DoGet(_REMOTE, '/patients/%s' % originalPatient['ID']) | |
| 10379 self.assertEqual(1, len(modifiedPatient["Labels"])) | |
| 10380 self.assertIn('label-patient', modifiedPatient["Labels"]) | |
| 10381 | |
| 626 | 10382 def test_findscu_group_length(self): |
| 10383 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') | |
| 10384 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') | |
| 10385 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') | |
| 10386 | |
| 10387 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0008,0000=22' ]) # GE like C-Find that includes group-length | |
| 10388 # print(i) | |
| 10389 s = re.findall('\(0008,0000\).*?\[(.*?)\]', i) | |
| 10390 self.assertEqual(0, len(s)) | |
|
646
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Sebastien Jodogne <s.jodogne@gmail.com>
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640
diff
changeset
|
10391 |
|
652
dfd42a6c13fa
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10392 |
|
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10393 def test_tags_after_pixel_data(self): |
| 653 | 10394 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10395 # https://discourse.orthanc-server.org/t/private-tags-with-group-7fe0-are-not-provided-via-rest-api/4744 | |
| 10396 u = UploadInstance(_REMOTE, '2024-05-30-GuillemVela.dcm') ['ID'] | |
| 10397 | |
| 10398 a = DoGet(_REMOTE, '/instances/%s/tags' % u) | |
| 10399 self.assertFalse('8e05,1000' in a) | |
| 10400 | |
| 10401 a = DoGet(_REMOTE, '/instances/%s/tags?whole' % u) | |
| 10402 self.assertTrue('8e05,1000' in a) | |
| 10403 self.assertEqual('XEOS_Attributes', a['8e05,0010']['Value']) | |
| 10404 self.assertEqual('acquisition', a['8e05,1000']['Value']) | |
| 10405 self.assertEqual('specimen', a['8e05,1001']['Value']) | |
| 10406 | |
| 10407 a = DoGet(_REMOTE, '/instances/%s/tags?full' % u) | |
| 10408 self.assertFalse('8e05,1000' in a) | |
| 10409 | |
| 10410 a = DoGet(_REMOTE, '/instances/%s/tags?full&whole' % u) | |
| 10411 self.assertTrue('8e05,1000' in a) | |
| 10412 self.assertEqual('XEOS_Attributes', a['8e05,0010']['Value']) | |
| 10413 self.assertEqual('acquisition', a['8e05,1000']['Value']) | |
| 10414 self.assertEqual('specimen', a['8e05,1001']['Value']) | |
| 10415 | |
| 10416 a = DoGet(_REMOTE, '/instances/%s/tags?short' % u) | |
| 10417 self.assertFalse('8e05,1000' in a) | |
| 10418 | |
| 10419 a = DoGet(_REMOTE, '/instances/%s/tags?short&whole' % u) | |
| 10420 self.assertTrue('8e05,1000' in a) | |
| 10421 self.assertEqual('XEOS_Attributes', a['8e05,0010']) | |
| 10422 self.assertEqual('acquisition', a['8e05,1000']) | |
| 10423 self.assertEqual('specimen', a['8e05,1001']) | |
| 10424 | |
| 10425 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % u) | |
| 10426 self.assertFalse('Unknown Tag & Data' in a) | |
| 10427 | |
| 10428 a = DoGet(_REMOTE, '/instances/%s/tags?simplify&whole' % u) | |
| 10429 self.assertTrue('Unknown Tag & Data' in a) | |
| 10430 | |
| 10431 a = DoGet(_REMOTE, '/instances/%s/simplified-tags' % u) | |
| 10432 self.assertFalse('Unknown Tag & Data' in a) | |
| 10433 | |
| 10434 a = DoGet(_REMOTE, '/instances/%s/simplified-tags?whole' % u) | |
| 10435 self.assertTrue('Unknown Tag & Data' in a) | |
|
652
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10436 |
|
dfd42a6c13fa
added test_tags_after_pixel_data
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
649
diff
changeset
|
10437 |
|
646
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10438 def test_requested_tags(self): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10439 u = UploadInstance(_REMOTE, 'DummyCT.dcm') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10440 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10441 def CheckPatientContent(patient): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10442 self.assertEqual(u['ParentPatient'], patient['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10443 self.assertEqual('Patient', patient['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10444 self.assertFalse(patient['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10445 self.assertEqual(0, len(patient['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10446 self.assertTrue('LastUpdate' in patient) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10447 self.assertEqual(2, len(patient['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10448 self.assertEqual('ozp00SjY2xG', patient['MainDicomTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10449 self.assertEqual('KNIX', patient['MainDicomTags']['PatientName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10450 self.assertEqual(1, len(patient['Studies'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10451 self.assertEqual(u['ParentStudy'], patient['Studies'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10452 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10453 def CheckStudyContent(study): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10454 self.assertEqual(u['ParentStudy'], study['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10455 self.assertEqual(u['ParentPatient'], study['ParentPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10456 self.assertEqual('Study', study['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10457 self.assertFalse(study['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10458 self.assertEqual(0, len(study['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10459 self.assertTrue('LastUpdate' in study) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10460 self.assertEqual(7, len(study['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10461 self.assertEqual('0ECJ52puWpVIjTuhnBA0um', study['MainDicomTags']['InstitutionName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10462 self.assertEqual('1', study['MainDicomTags']['ReferringPhysicianName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10463 self.assertEqual('20070101', study['MainDicomTags']['StudyDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10464 self.assertEqual('Knee (R)', study['MainDicomTags']['StudyDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10465 self.assertEqual('1', study['MainDicomTags']['StudyID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10466 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', study['MainDicomTags']['StudyInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10467 self.assertEqual('120000.000000', study['MainDicomTags']['StudyTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10468 self.assertEqual(2, len(study['PatientMainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10469 self.assertEqual('ozp00SjY2xG', study['PatientMainDicomTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10470 self.assertEqual('KNIX', study['PatientMainDicomTags']['PatientName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10471 self.assertEqual(1, len(study['Series'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10472 self.assertEqual(u['ParentSeries'], study['Series'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10473 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10474 def CheckSeriesContent(series): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10475 self.assertEqual(None, series['ExpectedNumberOfInstances']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10476 self.assertEqual('Unknown', series['Status']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10477 self.assertEqual(u['ParentSeries'], series['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10478 self.assertEqual(u['ParentStudy'], series['ParentStudy']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10479 self.assertEqual('Series', series['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10480 self.assertFalse(series['IsStable']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10481 self.assertEqual(0, len(series['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10482 self.assertTrue('LastUpdate' in series) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10483 self.assertEqual(13, len(series['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10484 self.assertEqual('0', series['MainDicomTags']['CardiacNumberOfImages']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10485 self.assertEqual('0.999841\\0.000366209\\0.0178227\\-0.000427244\\0.999995\\0.00326545', series['MainDicomTags']['ImageOrientationPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10486 self.assertEqual('24', series['MainDicomTags']['ImagesInAcquisition']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10487 self.assertEqual('GE MEDICAL SYSTEMS', series['MainDicomTags']['Manufacturer']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10488 self.assertEqual('MR', series['MainDicomTags']['Modality']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10489 self.assertEqual('ca', series['MainDicomTags']['OperatorsName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10490 self.assertEqual('324-58-2995/6', series['MainDicomTags']['ProtocolName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10491 self.assertEqual('20070101', series['MainDicomTags']['SeriesDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10492 self.assertEqual('AX. FSE PD', series['MainDicomTags']['SeriesDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10493 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', series['MainDicomTags']['SeriesInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10494 self.assertEqual('5', series['MainDicomTags']['SeriesNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10495 self.assertEqual('120000.000000', series['MainDicomTags']['SeriesTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10496 self.assertEqual('TWINOW', series['MainDicomTags']['StationName']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10497 self.assertEqual(1, len(series['Instances'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10498 self.assertEqual(u['ID'], series['Instances'][0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10499 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10500 def CheckInstanceContent(instance): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10501 self.assertEqual(2472, instance['FileSize']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10502 self.assertTrue('FileUuid' in instance) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10503 self.assertEqual(u['ID'], instance['ID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10504 self.assertEqual(u['ParentSeries'], instance['ParentSeries']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10505 self.assertEqual('Instance', instance['Type']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10506 self.assertEqual(1, instance['IndexInSeries']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10507 self.assertEqual(0, len(instance['Labels'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10508 self.assertEqual(7, len(instance['MainDicomTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10509 self.assertEqual('1', instance['MainDicomTags']['AcquisitionNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10510 self.assertEqual('0.999841\\0.000366209\\0.0178227\\-0.000427244\\0.999995\\0.00326545', instance['MainDicomTags']['ImageOrientationPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10511 self.assertEqual('-149.033\\-118.499\\-61.0464', instance['MainDicomTags']['ImagePositionPatient']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10512 self.assertEqual('20070101', instance['MainDicomTags']['InstanceCreationDate']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10513 self.assertEqual('120000.000000', instance['MainDicomTags']['InstanceCreationTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10514 self.assertEqual('1', instance['MainDicomTags']['InstanceNumber']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10515 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', instance['MainDicomTags']['SOPInstanceUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10516 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10517 def CheckRequestedTags(resource): |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10518 self.assertEqual(6, len(resource['RequestedTags'])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10519 self.assertEqual('ozp00SjY2xG', resource['RequestedTags']['PatientID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10520 self.assertEqual('Knee (R)', resource['RequestedTags']['StudyDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10521 self.assertEqual('AX. FSE PD', resource['RequestedTags']['SeriesDescription']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10522 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', resource['RequestedTags']['SOPClassUID']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10523 self.assertEqual('2800', resource['RequestedTags']['RepetitionTime']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10524 self.assertEqual(3, len(resource['RequestedTags']['DerivationCodeSequence'][0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10525 self.assertEqual('121327', resource['RequestedTags']['DerivationCodeSequence'][0]['CodeValue']) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10526 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10527 requestedTags = 'PatientID;StudyDescription;SeriesDescription;SOPClassUID;RepetitionTime;DerivationCodeSequence' |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10528 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10529 a = DoGet(_REMOTE, '/patients?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10530 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10531 self.assertEqual(7, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10532 CheckPatientContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10533 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10534 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10535 a = DoGet(_REMOTE, '/patients?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10536 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10537 self.assertEqual(8, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10538 CheckPatientContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10539 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10540 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10541 a = DoGet(_REMOTE, '/studies?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10542 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10543 self.assertEqual(9, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10544 CheckStudyContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10545 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10546 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10547 a = DoGet(_REMOTE, '/studies?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10548 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10549 self.assertEqual(10, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10550 CheckStudyContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10551 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10552 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10553 a = DoGet(_REMOTE, '/series?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10554 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10555 self.assertEqual(10, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10556 CheckSeriesContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10557 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10558 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10559 a = DoGet(_REMOTE, '/series?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10560 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10561 self.assertEqual(11, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10562 CheckSeriesContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10563 CheckRequestedTags(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10564 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10565 a = DoGet(_REMOTE, '/instances?expand') |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10566 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10567 self.assertEqual(8, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10568 CheckInstanceContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10569 self.assertFalse('RequestedTags' in a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10570 |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10571 a = DoGet(_REMOTE, '/instances?expand&requestedTags=%s' % requestedTags) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10572 self.assertEqual(1, len(a)) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10573 self.assertEqual(9, len(a[0])) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10574 CheckInstanceContent(a[0]) |
|
0daf680aa3cc
added test_requested_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
640
diff
changeset
|
10575 CheckRequestedTags(a[0]) |
|
647
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10576 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10577 a = DoGet(_REMOTE, '/patients/%s' % u['ParentPatient']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10578 self.assertEqual(7, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10579 CheckPatientContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10580 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10581 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10582 a = DoGet(_REMOTE, '/patients/%s?requestedTags=%s' % (u['ParentPatient'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10583 self.assertEqual(8, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10584 CheckPatientContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10585 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10586 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10587 a = DoGet(_REMOTE, '/studies/%s' % u['ParentStudy']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10588 self.assertEqual(9, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10589 CheckStudyContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10590 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10591 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10592 a = DoGet(_REMOTE, '/studies/%s?requestedTags=%s' % (u['ParentStudy'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10593 self.assertEqual(10, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10594 CheckStudyContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10595 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10596 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10597 a = DoGet(_REMOTE, '/series/%s' % u['ParentSeries']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10598 self.assertEqual(10, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10599 CheckSeriesContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10600 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10601 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10602 a = DoGet(_REMOTE, '/series/%s?requestedTags=%s' % (u['ParentSeries'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10603 self.assertEqual(11, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10604 CheckSeriesContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10605 CheckRequestedTags(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10606 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10607 a = DoGet(_REMOTE, '/instances/%s' % u['ID']) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10608 self.assertEqual(8, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10609 CheckInstanceContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10610 self.assertFalse('RequestedTags' in a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10611 |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10612 a = DoGet(_REMOTE, '/instances/%s?requestedTags=%s' % (u['ID'], requestedTags)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10613 self.assertEqual(9, len(a)) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10614 CheckInstanceContent(a) |
|
5ee7be1be006
test expansion of single resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
646
diff
changeset
|
10615 CheckRequestedTags(a) |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10616 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10617 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10618 def test_computed_tags(self): |
| 662 | 10619 # curl 'http://alice:orthanctest@localhost:8042/patients/0946fcb6-cf12ab43-bad958c1-bf057ad5-0fc6f54c?requested-tags=0020,1200;0020,1202;0020,1204' |
| 10620 # curl 'http://alice:orthanctest@localhost:8042/studies/6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf?requested-tags=0008,0061;0008,0062;0020,1206;0020,1208' | |
| 10621 # curl 'http://alice:orthanctest@localhost:8042/series/318603c5-03e8cffc-a82b6ee1-3ccd3c1e-18d7e3bb?requested-tags=0020,1209' | |
| 10622 # curl 'http://alice:orthanctest@localhost:8042/instances/ee693caa-9786a685-4f0f9fb0-4411cc8b-988f5574?requested-tags=0008,0056' | |
| 10623 | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10624 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10625 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10626 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10627 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm') |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10628 |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10629 instance = 'ee693caa-9786a685-4f0f9fb0-4411cc8b-988f5574' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10630 series = '318603c5-03e8cffc-a82b6ee1-3ccd3c1e-18d7e3bb' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10631 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10632 patient = '0946fcb6-cf12ab43-bad958c1-bf057ad5-0fc6f54c' |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10633 |
| 685 | 10634 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): # the old syntax is still required for the upgrade/downgrade PG tests |
| 10635 a = DoGet(_REMOTE, '/instances/%s?requested-tags=0008,0056' % instance) | |
| 10636 else: | |
| 10637 a = DoGet(_REMOTE, '/instances/%s?RequestedTags=0008,0056' % instance) | |
| 10638 | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10639 self.assertEqual(1, len(a['RequestedTags'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10640 self.assertEqual('ONLINE', a['RequestedTags']['InstanceAvailability']) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10641 |
| 685 | 10642 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10643 a = DoGet(_REMOTE, '/series/%s?requested-tags=0020,1209' % series) | |
| 10644 else: | |
| 10645 a = DoGet(_REMOTE, '/series/%s?RequestedTags=0020,1209' % series) | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10646 self.assertEqual(1, len(a['RequestedTags'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10647 self.assertEqual(2, int(a['RequestedTags']['NumberOfSeriesRelatedInstances'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10648 |
| 685 | 10649 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10650 a = DoGet(_REMOTE, '/studies/%s?requested-tags=0008,0061;0008,0062;0020,1206;0020,1208' % study) | |
| 10651 else: | |
| 10652 a = DoGet(_REMOTE, '/studies/%s?RequestedTags=0008,0061;0008,0062;0020,1206;0020,1208' % study) | |
| 10653 | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10654 self.assertEqual(4, len(a['RequestedTags'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10655 self.assertEqual('CT\\PT', a['RequestedTags']['ModalitiesInStudy']) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10656 self.assertEqual('1.2.840.10008.5.1.4.1.1.128\\1.2.840.10008.5.1.4.1.1.2', a['RequestedTags']['SOPClassesInStudy']) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10657 self.assertEqual(2, int(a['RequestedTags']['NumberOfStudyRelatedSeries'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10658 self.assertEqual(4, int(a['RequestedTags']['NumberOfStudyRelatedInstances'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10659 |
| 685 | 10660 if IsOrthancVersionAbove(_REMOTE, 1, 12, 4): |
| 10661 a = DoGet(_REMOTE, '/patients/%s?requested-tags=0020,1200;0020,1202;0020,1204' % patient) | |
| 10662 else: | |
| 10663 a = DoGet(_REMOTE, '/studies/%s?RequestedTags=0020,1200;0020,1202;0020,1204' % study) | |
|
661
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10664 self.assertEqual(3, len(a['RequestedTags'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10665 self.assertEqual(1, int(a['RequestedTags']['NumberOfPatientRelatedStudies'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10666 self.assertEqual(2, int(a['RequestedTags']['NumberOfPatientRelatedSeries'])) |
|
763e2ccbd0df
added test_computed_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
653
diff
changeset
|
10667 self.assertEqual(4, int(a['RequestedTags']['NumberOfPatientRelatedInstances'])) |
| 663 | 10668 |
| 10669 def test_computed_tags_and_patient_comments(self): | |
| 10670 UploadInstance(_REMOTE, 'WithEmptyPatientComments.dcm') | |
| 10671 | |
| 10672 # without requesting PatientComments, we get the computed tags | |
| 10673 i = CallFindScu([ '-k', 'PatientID=WITH_COMMENTS', '-k', 'QueryRetrieveLevel=Study', '-k', 'ModalitiesInStudy', '-k', 'NumberOfStudyRelatedSeries', '-k', 'NumberOfStudyRelatedInstances' ]) | |
| 10674 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) | |
| 10675 self.assertEqual(1, len(modalitiesInStudy)) | |
| 10676 self.assertEqual('CT', modalitiesInStudy[0]) | |
| 10677 | |
| 664 | 10678 if IsOrthancVersionAbove(_REMOTE, 1, 12, 5): |
| 663 | 10679 # when requesting PatientComments, with 1.12.4, we did not get the computed tags |
| 10680 i = CallFindScu([ '-k', 'PatientID=WITH_COMMENTS', '-k', 'QueryRetrieveLevel=Study', '-k', 'ModalitiesInStudy', '-k', 'NumberOfStudyRelatedSeries', '-k', 'NumberOfStudyRelatedInstances', '-k', 'PatientComments' ]) | |
| 10681 modalitiesInStudy = re.findall('\(0008,0061\).*?\[(.*?)\]', i) | |
| 10682 self.assertEqual(1, len(modalitiesInStudy)) | |
| 10683 self.assertEqual('CT', modalitiesInStudy[0]) | |
| 10684 numberOfStudyRelatedSeries = re.findall('\(0020,1206\).*?\[(.*?)\]', i) | |
| 10685 self.assertEqual(1, len(numberOfStudyRelatedSeries)) | |
| 10686 self.assertEqual(1, int(numberOfStudyRelatedSeries[0])) | |
| 10687 numberOfStudyRelatedInstances = re.findall('\(0020,1208\).*?\[(.*?)\]', i) | |
| 10688 self.assertEqual(1, len(numberOfStudyRelatedInstances)) | |
| 10689 self.assertEqual(1, int(numberOfStudyRelatedInstances[0])) | |
| 10690 | |
| 10691 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', | |
| 10692 'Expand': True, | |
| 10693 'Query' : { 'PatientID' : 'WITH_COMMENTS'}, | |
| 10694 'RequestedTags': ['ModalitiesInStudy', 'NumberOfStudyRelatedSeries', 'NumberOfStudyRelatedInstances', 'PatientComments']}) | |
| 10695 | |
| 10696 self.assertEqual(4, len(a[0]['RequestedTags'].keys())) | |
| 10697 self.assertEqual(1, int(a[0]['RequestedTags']['NumberOfStudyRelatedSeries'])) | |
| 10698 self.assertEqual(1, int(a[0]['RequestedTags']['NumberOfStudyRelatedInstances'])) | |
| 10699 self.assertEqual('CT', a[0]['RequestedTags']['ModalitiesInStudy']) | |
| 10700 self.assertEqual('', a[0]['RequestedTags']['PatientComments']) |