annotate Tests/Tests.py @ 55:a395fd51cc4f

test_dicom_to_json
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 21 Oct 2015 16:11:43 +0200
parents c5f8a6b0d85e
children 1059b8de42de
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1 #!/usr/bin/env python
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2 # -*- coding: utf-8 -*-
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3
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4
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5 # Orthanc - A Lightweight, RESTful DICOM Store
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6 # Copyright (C) 2012-2015 Sebastien Jodogne, Medical Physics
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7 # Department, University Hospital of Liege, Belgium
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8 #
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9 # This program is free software: you can redistribute it and/or
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10 # modify it under the terms of the GNU General Public License as
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11 # published by the Free Software Foundation, either version 3 of the
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12 # License, or (at your option) any later version.
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13 #
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14 # This program is distributed in the hope that it will be useful, but
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15 # WITHOUT ANY WARRANTY; without even the implied warranty of
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16 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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17 # General Public License for more details.
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18 #
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19 # You should have received a copy of the GNU General Public License
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20 # along with this program. If not, see <http://www.gnu.org/licenses/>.
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23 import tempfile
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24 import unittest
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25 import base64
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27 from PIL import ImageChops
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28 from Toolbox import *
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29 from xml.dom import minidom
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30
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31 _LOCAL = None
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32 _REMOTE = None
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35 def SetOrthancParameters(local, remote):
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36 global _LOCAL, _REMOTE
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37 _LOCAL = local
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38 _REMOTE = remote
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41 def ExtractDicomTags(rawDicom, tags):
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42 with tempfile.NamedTemporaryFile(delete = True) as f:
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43 f.write(rawDicom)
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44 f.flush()
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45 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
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47 result = []
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48 for tag in tags:
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49 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data)
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50 if match == None:
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51 result.append('')
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52 else:
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53 result.append(match.group(1))
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55 return result
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57
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58 def InstallLuaScript(path):
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59 with open(GetDatabasePath(path), 'r') as f:
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60 DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua')
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63 def UninstallLuaCallbacks():
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64 DoPost(_REMOTE, '/tools/execute-script', 'function OnStoredInstance() end', 'application/lua')
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65 InstallLuaScript('Lua/TransferSyntaxEnable.lua')
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67
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68 def CompareLists(a, b):
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69 if len(a) != len(b):
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70 return False
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71
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72 for i in range(len(a)):
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73 d = a[i] - b[i]
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74 if abs(d) >= 0.51: # Add some tolerance for rounding errors
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75 return False
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76
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77 return True
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79
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80 def CallMoveScu(args):
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81 subprocess.check_call([ FindExecutable('movescu'),
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82 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp)
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83 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc)
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84 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp)
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85 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args,
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86 stderr=subprocess.PIPE)
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87
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88
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89
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90 def GenerateTestSequence():
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91 return [
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92 {
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93 'StudyDescription': 'Hello^',
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94 'ReferencedStudySequence' : [
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95 {
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96 'StudyDescription': 'Toto',
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97 },
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98 {
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99 'StudyDescription': 'Tata',
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100 },
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101 ]
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102 },
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103 {
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104 'StudyDescription': 'Sébastien^',
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105 'StudyDate' : '19700202',
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106 }
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107 ]
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108
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109
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110
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111
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112 class Orthanc(unittest.TestCase):
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113 def setUp(self):
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114 DropOrthanc(_LOCAL)
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115 DropOrthanc(_REMOTE)
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116 UninstallLuaCallbacks()
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117 #print "In test", self._testMethodName
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118
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119 def AssertSameImages(self, truth, url):
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120 im = GetImage(_REMOTE, url)
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121 self.assertTrue(CompareLists(truth, im.getdata()))
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122
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123
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124 def test_system(self):
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125 self.assertTrue('Version' in DoGet(_REMOTE, '/system'))
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126 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
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127 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
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128
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129 def test_upload(self):
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130 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
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131 self.assertEqual('Success', u['Status'])
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132 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
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133 self.assertEqual('AlreadyStored', u['Status'])
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134 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
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135 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
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136 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
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137 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
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138
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139 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % u['ID'])
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140 self.assertEqual('20070101', i['StudyDate'])
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141
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142
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143 def test_upload_2(self):
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144 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
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145 instance = DoGet(_REMOTE, '/instances/%s' % i)
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146 self.assertEqual(i, instance['ID'])
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147 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109',
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148 instance['MainDicomTags']['SOPInstanceUID'])
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149
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parents:
diff changeset
150 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
151 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
152 series['MainDicomTags']['SeriesInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
153
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
154 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
155 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
156 study['MainDicomTags']['StudyInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
157
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
158 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
159 self.assertEqual('ozp00SjY2xG',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
160 patient['MainDicomTags']['PatientID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
161
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
162 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
163 self.assertEqual(2472, len(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
164 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
165 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
167 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
168
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
169
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
170 def test_images(self):
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
171 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
172 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
173
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
174 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
175 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
176 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
177 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
178
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
179 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
180 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
181 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
182 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
183
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
184 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
185 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
186 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
187
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
188 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
189 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
190 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
191 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
192
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
193 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
194 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
195 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
196 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
197
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
198 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
199 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
200 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
201
6
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
202
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
203 def test_hierarchy(self):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
204 UploadFolder(_REMOTE, 'Brainix/Epi')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
205 UploadFolder(_REMOTE, 'Brainix/Flair')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
206 UploadFolder(_REMOTE, 'Knee/T1')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
207 UploadFolder(_REMOTE, 'Knee/T2')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
208
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
209 p = DoGet(_REMOTE, '/patients')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
210 s = DoGet(_REMOTE, '/studies')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
211 t = DoGet(_REMOTE, '/series')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
212 self.assertEqual(2, len(p))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
213 self.assertEqual(2, len(s))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
214 self.assertEqual(4, len(t))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
215 self.assertEqual(94, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
216
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
217 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
218 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
219 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
220 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
221
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
222 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
223 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
224 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
225 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
226
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
227 self.assertTrue(brainixPatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
228 self.assertTrue(kneePatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
229 self.assertTrue(brainixStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
230 self.assertTrue(kneeStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
231 self.assertTrue(brainixEpi in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
232 self.assertTrue(brainixFlair in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
233 self.assertTrue(kneeT1 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
234 self.assertTrue(kneeT2 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
235
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
236 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
237 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
238 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
239
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
240 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
241 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
242 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
243
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
244 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
245 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
246
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
247 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
248 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
249
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
250 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
251 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
252 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
253 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
254
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
255 for patient in p:
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
256 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
257 self.assertEqual(patient, study['ParentPatient'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
258 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
259 self.assertEqual(study['ID'], series['ParentStudy'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
260 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
261 self.assertEqual(series['ID'], instance['ParentSeries'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
262
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
263 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])),
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
264 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID'])))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
265
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
266
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
267 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
268 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
269 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
270 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
271 self.assertEqual(50, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
272 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
273
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
274 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
275 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
276 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
277 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
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parents: 5
diff changeset
278 self.assertEqual(24, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
279 self.assertEqual('Study', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
280 self.assertEqual(kneeStudy, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
281
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
282 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
283 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
284 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
285 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
286 self.assertEqual(23, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
287 self.assertEqual('Series', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
288 self.assertEqual(kneeT1, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
289
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
290 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
291 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
292 self.assertEqual(0, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
293 self.assertEqual(0, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
294 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
295 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
296
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
297 DropOrthanc(_REMOTE)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
298 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
299 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
300
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
301
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
302 def test_multiframe(self):
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
303 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
304 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
305
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
306 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
307 self.assertEqual("L", im.mode)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
308 self.assertEqual(512, im.size[0])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
309 self.assertEqual(512, im.size[1])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
310
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
311 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
312 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
313 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
314 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
315 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
316
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
317
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
318 def test_changes(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
319 # Check emptiness
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
320 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
321 self.assertEqual(0, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
322 self.assertEqual(0, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
323 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
324 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
325 self.assertEqual(0, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
326 self.assertEqual(0, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
327 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
328
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
329 # Add 1 instance
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
330 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
331 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
332 begin = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
333 self.assertEqual(4, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
334 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
335 self.assertEqual(c['Changes'][-1]['Seq'], c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
336
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
337 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
338 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
339 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
340 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
341 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
342 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
343 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
344 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
345 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
346 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
347 self.assertEqual(begin - 1, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
348 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
349 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
350 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
351 self.assertEqual(begin - 2, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
352 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
353
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
354 UploadFolder(_REMOTE, 'Knee/T1')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
355 UploadFolder(_REMOTE, 'Knee/T2')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
356 since = begin
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
357 countPatients = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
358 countStudies = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
359 countSeries = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
360 countInstances = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
361 completed = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
362 while True:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
363 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 })
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
364 since = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
365 for i in c['Changes']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
366 if i['ResourceType'] == 'Instance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
367 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
368 if i['ResourceType'] == 'Patient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
369 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
370 if i['ResourceType'] == 'Study':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
371 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
372 if i['ResourceType'] == 'Series':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
373 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
374 if i['ChangeType'] == 'NewInstance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
375 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
376 if i['ChangeType'] == 'NewPatient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
377 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
378 if i['ChangeType'] == 'NewStudy':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
379 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
380 if i['ChangeType'] == 'NewSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
381 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
382 if i['ChangeType'] == 'CompletedSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
383 completed += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
384 self.assertTrue('ID' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
385 self.assertTrue('Path' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
386 self.assertTrue('Seq' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
387 if c['Done']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
388 break
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
389
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
390 self.assertEqual(2 * 50, countInstances)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
391 self.assertEqual(2 * 1, countPatients)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
392 self.assertEqual(2 * 1, countStudies)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
393 self.assertEqual(2 * 2, countSeries)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
394 self.assertEqual(0, completed)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
395
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
396
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
397 def test_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
398 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
399 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
400
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
401 z = GetArchive(_REMOTE, '/patients/%s/archive' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
402 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
403
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
404 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
405 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
406
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
407 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
408 self.assertEqual(1, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
409
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
410 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
411
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
412 z = GetArchive(_REMOTE, '/patients/%s/archive' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
413 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
414
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
415
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
416 def test_media_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
417 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
418 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
419
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
420 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
421 self.assertEqual(3, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
422 self.assertTrue('IMAGES/IM0' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
423 self.assertTrue('IMAGES/IM1' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
424 self.assertTrue('DICOMDIR' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
425
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
426 try:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
427 os.remove('/tmp/DICOMDIR')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
428 except:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
429 # The file does not exist
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
430 pass
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
431
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
432 z.extract('DICOMDIR', '/tmp')
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
433 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
434 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
435 self.assertEqual(3, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
436 self.assertTrue(a[0].startswith('Warning'))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
437 self.assertEqual('BasicDirectory', a[1])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
438 self.assertEqual('', a[2])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
439
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
440 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
441 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
442 self.assertEqual(1, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
443 self.assertEqual('', a[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
444
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
445 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
446 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
447 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
448
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
449 os.remove('/tmp/DICOMDIR')
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
450
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
451
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
452 def test_protection(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
453 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
454 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
455 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
456 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
457 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
458 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
459 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
460 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
461 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
462 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
463 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
464 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
465
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
466
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
467 def test_raw_tags(self):
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
468 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
469
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
470 dicom = DoGet(_REMOTE, '/instances/%s/file' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
471 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
472
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
473 s = '/instances/%s/content/' % i
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
474
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
475 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
476 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
477
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
478 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
479 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
480
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
481 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
482 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
483 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
484 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
485
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
486 for i in DoGet(_REMOTE, '/instances'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
487 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
488 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), ''))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
489
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
490
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
491 def test_raw_tags_mdn(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
492 # Bug reported by Cyril Paulus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
493 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
494 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
495
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
496
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
497 def test_modify_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
498 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
499 modified = DoPost(_REMOTE, '/instances/%s/modify' % i,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
500 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
501 "Replace" : {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
502 "PatientName" : "hello",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
503 #"PatientID" : "world"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
504 },
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
505 "Remove" : [ "StationName" ],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
506 "RemovePrivateTags" : None
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
507 }),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
508 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
509 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
510
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
511 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
512 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
513 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
514 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
515
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
516 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
517 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
518 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
519 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
520
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
521
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
522 def test_modify_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
523 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
524 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
525 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
526
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
527 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
528 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
529 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
530 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
531
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
532 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
533 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
534 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
535 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
536 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
537 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
538 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
539
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
540 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
541 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
542
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
543
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
544 def test_modify_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
545 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
546 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
547 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
548 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
549
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
550 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
551 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
552 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
553 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
554
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
555 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
556 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
557 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
558 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
559 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
560 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
561 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
562
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
563 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
564 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
565 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
566 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
567 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
568
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
569 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
570 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
571
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
572
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
573 def test_anonymize_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
574 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
575 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
576 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
577
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
578 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
579 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
580 '{}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
581 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
582
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
583 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
584 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
585 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
586 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
587 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
588 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
589 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
590
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
591 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
592 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
593
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
594
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
595 def test_anonymize_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
596 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
597 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
598 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
599 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
600
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
601 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
602 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
603 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
604 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
605
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
606 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
607 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
608 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
609 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
610 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
611 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
612 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
613
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
614 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
615 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
616 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
617 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
618 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
619
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
620 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
621 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
622
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
623
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
624
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
625 def test_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
626 # Check emptiness
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
627 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
628 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
629 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
630 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
631 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
632 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
633 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
634 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
635
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
636 # Add 1 instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
637 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
638 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
639
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
640 # Export the instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
641 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
642 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
643 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
644 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
645 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
646
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
647 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
648 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
649 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
650 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
651 e = DoGet(_REMOTE, '/exports?limit=1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
652 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
653 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
654 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
655 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
656 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
657 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
658 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
659 seqInstance = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
660
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
661 # Export the series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
662 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
663
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
664 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
665 self.assertEqual(2, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
666 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
667 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
668 seqSeries = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
669 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
670 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
671 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
672 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
673 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
674 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
675 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
676 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
677 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
678 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
679 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
680 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
681 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
682
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
683 # Export the study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
684 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
685 seqStudy = DoGet(_REMOTE, '/exports')['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
686
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
687 # Export the patient
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
688 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
689 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
690 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
691 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
692 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
693
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
694 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
695 self.assertEqual(4, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
696 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
697 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
698 seqPatient = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
699 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
700 self.assertNotEqual(seqSeries, seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
701 self.assertNotEqual(seqStudy, seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
702 self.assertTrue(seqInstance < seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
703 self.assertTrue(seqSeries < seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
704 self.assertTrue(seqStudy < seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
705 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
706 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
707 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
708 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
709 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
710 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
711 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
712 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
713 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
714 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
715 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
716 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
717 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
718 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
719 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
720 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
721 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
722 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
723 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
724 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
725
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
726
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
727 # Check the content of the logged information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
728 e = DoGet(_REMOTE, '/exports')['Exports']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
729
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
730 if 'PatientID' in e[0]:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
731 # Since Orthanc 0.8.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
732 patient = 'PatientID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
733 study = 'StudyInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
734 series = 'SeriesInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
735 instance = 'SOPInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
736 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
737 # Up to Orthanc 0.8.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
738 patient = 'PatientId'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
739 study = 'StudyInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
740 series = 'SeriesInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
741 instance = 'SopInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
742
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
743 for k in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
744 self.assertTrue('Date' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
745 self.assertTrue('Seq' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
746 self.assertEqual('orthanctest', e[k]['RemoteModality'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
747
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
748 self.assertEqual(10, len(e[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
749 self.assertEqual('Instance', e[0]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
750 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
751 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
752 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
753 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
754 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
755 self.assertEqual('ozp00SjY2xG', e[0][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
756
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
757 self.assertEqual(9, len(e[1]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
758 self.assertEqual('Series', e[1]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
759 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
760 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
761 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
762 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
763 self.assertEqual('ozp00SjY2xG', e[1][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
764
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
765 self.assertEqual(8, len(e[2]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
766 self.assertEqual('Study', e[2]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
767 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
768 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
769 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
770 self.assertEqual('ozp00SjY2xG', e[2][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
771
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
772 self.assertEqual(7, len(e[3]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
773 self.assertEqual('Patient', e[3]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
774 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
775 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
776 self.assertEqual('ozp00SjY2xG', e[3][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
777
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
778 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
779 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
780
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
781
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
782 def test_store_peer(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
783 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
784 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
785
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
786 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
787 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
788 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
789
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
790 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
791 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
792 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
793
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
794 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
795
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
796 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
797 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
798
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
799
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
800 def test_bulk_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
801 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
802
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
803 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
804 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
805
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
806 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
807 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
808
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
809 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
810
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
811 # Send using patient's UUID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
812 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
813 j = DoPost(_REMOTE, '/modalities/orthanctest/store',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
814 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
815 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
816
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
817
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
818 def test_color(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
819 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
820 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
821 self.assertEqual("RGB", im.mode)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
822 self.assertEqual(41, im.size[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
823 self.assertEqual(41, im.size[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
824
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
825 # http://effbot.org/zone/pil-comparing-images.htm
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
826 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png'))
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
827 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
828
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
829
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
830 def test_faking_ruby_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
831 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
832 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
833 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
834 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
835 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
836 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
837 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
838 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
839 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
840 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
841 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
842 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
843
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
844
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
845 def test_faking_ruby_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
846 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
847 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
848 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
849 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
850 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
851 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
852 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
853 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
854 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
855
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
856
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
857 def test_faking_google_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
858 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
859 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
860 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
861 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
862 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
863 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
864 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
865 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
866 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
867 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
868 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
869 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
870
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
871
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
872 def test_faking_google_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
873 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
874 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
875 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
876 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
877 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
878 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
879 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
880 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
881 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
882
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
883
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
884 def test_lua(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
885 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
886 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
887 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
888
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
889
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
890 def test_metadata(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
891 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
892 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
893 i = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
894
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
895 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
896 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
897 self.assertEqual('LastUpdate', m[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
898
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
899 m = DoGet(_REMOTE, '/instances/%s/metadata' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
900 self.assertEqual(3, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
901 self.assertTrue('IndexInSeries' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
902 self.assertTrue('ReceptionDate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
903 self.assertTrue('RemoteAET' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
904
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
905 # Play with custom metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
906 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
907 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
908 self.assertEqual(2, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
909 self.assertTrue('LastUpdate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
910 self.assertTrue('5555' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
911 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
912 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
913 self.assertEqual('hello', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
914 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
915 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
916 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
917 self.assertTrue('LastUpdate' in m)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
918
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
919
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
920 def test_statistics(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
921 # Upload 16 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
922 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
923 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
924 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
925 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
926 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
927
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
928 s = DoGet(_REMOTE, '/statistics')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
929 self.assertEqual(16, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
930 self.assertEqual(2, s['CountPatients'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
931 self.assertEqual(2, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
932 self.assertEqual(4, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
933 d = int(s['TotalUncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
934
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
935 e = 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
936 for patient in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
937 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
938 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
939 self.assertEqual(1, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
940 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
941 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
942
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
943 for study in DoGet(_REMOTE, '/studies'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
944 s = DoGet(_REMOTE, '/studies/%s/statistics' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
945 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
946 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
947 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
948
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
949 for series in DoGet(_REMOTE, '/series'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
950 s = DoGet(_REMOTE, '/series/%s/statistics' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
951 self.assertEqual(4, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
952 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
953
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
954 self.assertEqual(3 * d, e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
956
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
957 def test_custom_attachment(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
958 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
959 patient = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
960 instance = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
961 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
962 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
963
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
964 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
965 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
966 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
967 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
968
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
969 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
970 hello = 'hellohellohellohellohellohellohellohellohello'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
971 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
972 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
973 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
974 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
975 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
976
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
977 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
978 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
979 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
980 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
981 size +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
982 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
983 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
984
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
985 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
986 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
987 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
988 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
989 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
990 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
991 self.assertEqual('world2', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
992
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
993 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
994 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
995 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
996 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
997 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
998 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
999
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1000 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1001 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1002 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1003
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1004 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1005 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1006
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1007
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1008 def test_incoming_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1009 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1010 subprocess.check_call([ FindExecutable('storescu'),
44
ffa542cce638 Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 43
diff changeset
1011 _REMOTE['Server'], str(_REMOTE['DicomPort']),
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1012 GetDatabasePath('ColorTestImageJ.dcm') ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1013 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1014
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1016 def test_incoming_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1017 def CallFindScu(args):
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1018 p = subprocess.Popen([ FindExecutable('findscu'),
44
ffa542cce638 Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 43
diff changeset
1019 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'],
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1020 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1021 stderr=subprocess.PIPE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1022 return p.communicate()[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1023
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1024 UploadInstance(_REMOTE, 'Multiframe.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1025 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1026
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1027 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1028 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1029 self.assertEqual(2, len(patientNames))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1030 self.assertTrue('Test Patient BG ' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1031 self.assertTrue('Anonymized' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1032
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1033 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1034 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1035 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1036 self.assertTrue('20070208' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1037 self.assertTrue('19980312' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1038
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1039 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1040 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1041 self.assertEqual(1, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1042
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1043 # Test the "CaseSentitivePN" flag (false by default)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1044 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1045 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1046 self.assertEqual(1, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1047
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1048
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1049 def test_incoming_movescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1050 UploadInstance(_REMOTE, 'Multiframe.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1051
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1052 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
17
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1053 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ])
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1054 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1055 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=12345678' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1056 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1057
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1058
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1059 def test_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1060 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1061 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1062 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1063 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1064
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1065 # Test the "find-patient" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1066 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1067 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1068 self.assertEqual('ozp00SjY2xG', p[0]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1069
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1070 # Test wildcards constraints. The "LO" value representation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1071 # for PatientID is always case-sensitive, but the "PN" for
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1072 # PatientName might depend on the implementation:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1073 # "GenerateConfigurationForTests.py" will force it to be case
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1074 # insensitive (which was the default until Orthanc 0.8.6).
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1075 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1076 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1077
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1078 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1079 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1080
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1081 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1082 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1083
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1084 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1085 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1086
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1087 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1088 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1089
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1090 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1091 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1092
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1093 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1094 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1095
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1096 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1097 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1098 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1099 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1100
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1101 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1102 self.assertEqual(2, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1103
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1104 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1105 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1106 self.assertEqual(1, len(s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1107 self.assertEqual('20070208', s[0]['StudyDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1108
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1109 # Test range searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1110 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1111 'StudyDate' : '-20070101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1112 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1113
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1114 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1115 'StudyDate' : '20090101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1116 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1117
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1118 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1119 'StudyDate' : '20070101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1120 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1121
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1122 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1123 'StudyDate' : '-20090101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1124 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1125
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1126 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1127 'StudyDate' : '20070207-20070207' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1128 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1129
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1130 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1131 'StudyDate' : '20070208-20070208' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1132 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1133
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1134 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1135 'StudyDate' : '20070209-20070209' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1136 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1137
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1138 # Test the ModalitiesInStudy tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1139 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1140 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1141 'ModalitiesInStudy' : 'US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1142 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1143
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1144 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1145 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1146 'ModalitiesInStudy' : 'CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1147 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1148
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1149 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1150 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1151 'ModalitiesInStudy' : 'US\\CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1152 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1153
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1154 # Test the "find-series" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1155 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1156 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1157 'StudyInstanceUID' : s[0]['StudyInstanceUID'] })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1158 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1159
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1160 # Test "\" separator
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1161 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1162 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1163 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1164 'Modality' : 'MR\\CT\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1165 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1166
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1167 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1168 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1169 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1170 'Modality' : 'MR\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1171 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1172
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1173
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1174 def test_update_modalities(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1175 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1176 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1177 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1178 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1179 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1180 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1181 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1182 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1183 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1184 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1185 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1186 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'MedInriaaa' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1187 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1188 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1189 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1190 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1191 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1192 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1193
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1194
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1195 def test_update_peers(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1196 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1197 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1198 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1199 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1200 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1201 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1202 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1203 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1204 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1205 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1206 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1207 DoPut(_REMOTE, '/peers/tata', [ 'http://localhost:8042/', 'user', 'pass' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1208 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1209 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1210 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1211 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1212 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1213 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1214 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1215 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1216
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1217
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1218 def test_mesterhazy_modification(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1219 # When I modify a series ( eg. curl
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1220 # http://localhost:8042/series/uidhere/modify -X POST -d
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1221 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1222 # series is added to a new Study, instead of the existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1223 # Study. Fixed in Orthanc 0.7.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1224
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1225 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1226 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1227 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1228
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1229 modified = DoPost(_REMOTE, '/series/%s/modify' % series,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1230 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }}))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1231
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1232 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1234
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1235 def test_create(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1236 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1237 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1238 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1239 'Modality' : 'CT',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1240 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1241 }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1242
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1243 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1244 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1245
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1246 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1247 self.assertEqual((5, 5), png.size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1248
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1249 j = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1250 self.assertEqual('Instance', j['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1251 self.assertEqual(j['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1252
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1253
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1254 def test_pilates(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1255 # "SCU failed error when accessing orthanc with osirix" by
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1256 # Pilates Agentur (Mar 10, 2014 at 9:33 PM)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1257 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1258 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1259 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1260 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1261
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1262
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1263 def test_shared_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1264 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1265 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1266 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1267
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1268 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1269 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1270 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1271 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1272 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1273 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1274 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1275 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1276
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1277 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1278 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1279
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1280
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1281 def test_modules(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1282 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1283 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1284 s = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1285 t = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1286
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1287 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1288 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1289 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1290 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1291 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1292 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1293 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1294 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1295 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1296 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1297
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1298
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1299 def test_auto_directory(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1300 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1301 self.assertTrue('now' in DoGet(_REMOTE, '/tools'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1302 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1303 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1304 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1305 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1306 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1307 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1308 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1309 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1310 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1311 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1312 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1313 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1314 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope'))
28
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1315 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1316 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1317 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status)
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1318 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1319
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1320
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1321 def test_echo(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1322 DoPost(_REMOTE, '/modalities/orthanctest/echo')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1323
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1324
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1325 def test_xml(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1326 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1327 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1328 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1329 self.assertEqual(len(items), len(json))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1330
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1331 self.assertTrue('dicom-conformance' in json)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1332
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1333 ok = False
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1334 for i in items:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1335 if i.childNodes[0].data == 'dicom-conformance':
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1336 ok = True
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1337 self.assertTrue(ok)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1338
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1339
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1340 def test_googlecode_issue_16(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1341 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1342 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1343 self.assertEqual('0018,1063', t)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1344
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1345
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1346 def test_googlecode_issue_22(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1347 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1348 a = [
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1349 "f804691f62197040438f4627c6b994f1", # Frame 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1350 "c69eee9a51eea3e8611e82e578897254",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1351 "315666be83e2d0111c77bc0996d84901",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1352 "3e27aa959d911172c48a1436443c72b1",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1353 "958642c9e7e9d232d3869faff546058c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1354 "5e7ea8e3e4230cae707d143481355c59",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1355 "eda37f83558d858a596175aed8b2ad47",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1356 "486713bd2895c4ecbe0e97715ac7f80a",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1357 "091ef729eb169e67da8a0faa9631f9a8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1358 "5aa2b8c7ffe0a483efaa8e12417686ca",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1359 "e2f39e85896fe58876654b94cd0b5013",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1360 "6fd2129e4950abbe1be053bc814d5da8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1361 "c3331a8ba7a757f3d423735ab7fa81f9",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1362 "746f808582156734dd6b6fdfd3a0b72c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1363 "8075ea2b227a70c60ea6b7b75a6bb190",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1364 "806b8b3e300c615099c11a5ec23465aa",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1365 "7c836aa298ba6eef96434579af631a11",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1366 "a0357dc9f4f72d73a885c33d7c287446",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1367 "f25ba3be1cc7d7fad95706adc199ea7d",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1368 "8b114c526b8cbed6cad8a3248b7b480c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1369 "44e6670f127e612a2b4aa60a0d207698",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1370 "b8945f90fe02facf2ace24ca1ecbe0a5",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1371 "95c796c2fa8f59018b15cf2987b1f79b",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1372 "ce0a51ab30224205b44920221dc27351", # Frame 23
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1373 ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1374
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1375 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1376 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1377
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1378 for i in range(len(a)):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1379 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i))))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1380
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1381
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1382 def test_googlecode_issue_19(self):
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1383 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1384 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1385
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1386 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID']
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1387 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview'))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1388
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1389
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1390 def test_googlecode_issue_37(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1391 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1392 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1393
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1394 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1395 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1396 'Query' : { 'StationName' : 'SMR4-MP3' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1397 self.assertEqual(1, len(a))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1398
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1399
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1400 def test_rest_find(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1401 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1402 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1403 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1404 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1405 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1406 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1407
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1408 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1409 'CaseSensitive' : False,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1410 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1411 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1412
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1413 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1414 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1415 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1416 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1417
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1418 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1419 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1420 'CaseSensitive' : False,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1421 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1422 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1423 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1424
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1425 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1426 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1427 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1428 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1429
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1430 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1431 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1432 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1433 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1434
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1435 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1436 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1437 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1438 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1439
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1440 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1441 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1442 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1443 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1444
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1445 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1446 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1447
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1448 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1449 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1450
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1451 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1452 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1453
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1454 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1455 self.assertEqual(8, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1456
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1457
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1458 def test_rest_query_retrieve(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1459 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1460
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1461 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1462 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1463 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1464 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1465 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1466 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1467
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1468 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1469 for p in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1470 DoPost(_REMOTE, '/modalities/orthanctest/store', p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1471 DoDelete(_REMOTE, '/patients/%s' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1472
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1473 for q in DoGet(_REMOTE, '/queries'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1474 DoDelete(_REMOTE, '/queries/%s' % q)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1475
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1476 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1477 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1478 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series',
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1479 'Query' : {
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1480 'PatientName' : '*NE*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1481 'StudyDate' : '*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1482 }})['ID']
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1483 self.assertEqual(1, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1484
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1485 b = DoGet(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1486 self.assertTrue('answers' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1487 self.assertTrue('level' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1488 self.assertTrue('modality' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1489 self.assertTrue('query' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1490 self.assertTrue('retrieve' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1491 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1492 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1493
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1494 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1495 self.assertEqual(2, len(q))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1496 self.assertTrue('PatientName' in q)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1497 self.assertTrue('StudyDate' in q)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1498 self.assertEqual('*NE*', q['PatientName'])
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1499 self.assertEqual('*', q['StudyDate'])
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1500
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1501 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1502
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1503 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1504 self.assertTrue('content' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1505 self.assertTrue('retrieve' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1506
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1507 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1508 self.assertEqual('887', s['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1509 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1510
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1511 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1512 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1513 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1514 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1515 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1516 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1517
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1518 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1519 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1520 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1521 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1522 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1523
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1524 DoDelete(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1525 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1526
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1527
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1528 def test_parent(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1529 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1530 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1531 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1532 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1533 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1534 self.assertEqual(instance, u);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1535
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1536 a = DoGet(_REMOTE, '/studies/%s/patient' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1537 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1538 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1539
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1540 a = DoGet(_REMOTE, '/series/%s/patient' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1541 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1542 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1543
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1544 a = DoGet(_REMOTE, '/series/%s/study' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1545 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1546 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1547
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1548 a = DoGet(_REMOTE, '/instances/%s/patient' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1549 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1550 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1551
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1552 a = DoGet(_REMOTE, '/instances/%s/study' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1553 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1554 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1555
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1556 a = DoGet(_REMOTE, '/instances/%s/series' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1557 self.assertEqual('Series', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1558 self.assertEqual(series, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1559
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1560
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1561 def test_shanon(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1562 def Anonymize(instance, replacements = {}):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1563 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, { 'Replace' : replacements }, 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1564
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1565 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1566 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1567 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1568
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1569 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1570 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1571 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1572 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1573 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1574
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1575 a = ExtractDicomTags(Anonymize(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1576 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1577 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1578 self.assertTrue(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1579
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1580 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1581 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1582 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1583 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1584
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1585 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1586 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1587 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1588
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1589 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1590 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1591 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1592
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1593 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1594 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1595 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1596
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1597 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1598 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1599 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1600
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1601 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1602 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1603 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1604 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1605 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1606 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1607
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1608 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1609
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1610
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1611 def test_shanon_2(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1612 def Modify(instance, replacements = {}):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1613 return DoPost(_REMOTE, '/instances/%s/modify' % instance, { 'Replace' : replacements }, 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1614
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1615 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1616 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1617 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1618
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1619 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1620 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1621 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1622 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1623 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1624
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1625 a = ExtractDicomTags(Modify(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1626 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1627 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1628 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1629 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1630 self.assertEqual(0, len(a[4]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1631
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1632 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1633 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1634 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1635 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1636 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1637
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1638 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1639 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1640 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1641 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1642 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1643
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1644 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1645 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1646 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1647 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1648 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1649
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1650 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1651 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1652 self.assertNotEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1653 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1654 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1655
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1656 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1657 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1658 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1659 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1660 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1661 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1662 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1663 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1664
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1665 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1666
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1667
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1668 def test_instances_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1669 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1670 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1671 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1672 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1673
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1674 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1675 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1676 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1677 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1678
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1679 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1680 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1681 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1682 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1683
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1684 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1685 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1686 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1687 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1688
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1689 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1690 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1691 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1692
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1693
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1694 def test_lookup(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1695 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1696 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1697
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1698 UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1699
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1700 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1701 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1702 self.assertEqual('Patient', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1703 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1704 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1705
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1706 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1707 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1708 self.assertEqual('Study', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1709 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1710 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1711
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1712 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1713 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1714 self.assertEqual('Series', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1715 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1716 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1717
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1718 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1719 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1720 self.assertEqual('Instance', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1721 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1722 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1723
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1724 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1725 a = DoPost(_REMOTE, '/tools/lookup', '3113719P')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1726 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1727
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1728
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1729 def test_autorouting(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1730 knee1 = 'Knee/T1/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1731 knee2 = 'Knee/T2/IM-0001-0002.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1732 other = 'Brainix/Flair/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1733
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1734 # Check that this version is >= 0.8.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1735 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1736 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1737
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1738 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1739 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1740
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1741 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1742 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1743 InstallLuaScript('Lua/Autorouting.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1744 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1745 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1746 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1747 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1748 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1749 self.assertEqual(3, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1750
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1751 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1752 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1753 InstallLuaScript('Lua/AutoroutingConditional.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1754 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1755 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1756 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1757 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1758 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1759 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1760
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1761 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1762 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1763 InstallLuaScript('Lua/AutoroutingModification.lua')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1764 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1765 WaitEmpty(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1766 UninstallLuaCallbacks()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1767 i = DoGet(_LOCAL, '/instances')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1768 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1769
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1770 with tempfile.NamedTemporaryFile(delete = True) as f:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1771 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1772 f.flush()
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1773 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1774 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1775 self.assertEqual(None, re.search('"MilitaryRank"', routed))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
1776 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag
17
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1777
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1778
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1779 def test_storescu_rf(self):
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1780 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1781 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1782 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
1783 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1784
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1785
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1786 def test_anonymize_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1787 def AnonymizeAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1788 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1789 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1790
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1791 def ModifyAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1792 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1793 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1794
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1795 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1796 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1797 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1798 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1799 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1800 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1801
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1802 b = AnonymizeAndUpload(a, '{}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1803 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1804 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1805
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1806 # Keep private tag (only OK since Orthanc 0.8.0)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1807 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1808 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1809 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1810
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1811 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1812 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1813 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1814
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1815 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1816 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1817 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1818
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1819 # Examples from the Wiki
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1820 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": null}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1821 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1822 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1823 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1824 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1825 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1826 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1827 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1828 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1829
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1830 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": null}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1831 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1832 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1833 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1834 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1835 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1836 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1837
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1838 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1839 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1840 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1841 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1842 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1843 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1844 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1845
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1846
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1847 # Test modify non-existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1848 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1849 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1850 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1851 'Modality' : 'CT',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1852 }))['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1853
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1854 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1855 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1856 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1857
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1858 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1859 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1860 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1861 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
1862
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1863
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1864 def test_incoming_jpeg(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1865 def storescu():
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1866 with open(os.devnull, 'w') as FNULL:
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1867 subprocess.check_call([ FindExecutable('storescu'), '-xs',
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1868 _REMOTE['Server'], str(_REMOTE['DicomPort']),
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1869 GetDatabasePath('Knix/Loc/IM-0001-0001.dcm') ],
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1870 stderr = FNULL)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1871
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1872 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1873 InstallLuaScript('Lua/TransferSyntaxDisable.lua')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1874 self.assertRaises(Exception, storescu)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1875 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1876 InstallLuaScript('Lua/TransferSyntaxEnable.lua')
43
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 40
diff changeset
1877 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')")
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1878 storescu()
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1879 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1880
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1881
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1882 def test_storescu_jpeg(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1883 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1884
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1885 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1886 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1887 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1888 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1889
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1890 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1891 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1892 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1893 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ])
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1894 self.assertEqual(5, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1895
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1896 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1897
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1898 DropOrthanc(_REMOTE)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1899 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1900
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1901
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1902 def test_pixel_data(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1903 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1904 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1905 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1906
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1907 phenixSize = 358 * 512 * 2
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1908 colorSize = 1000 * 1000 * 3
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1909 jpegSize = 51918
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1910
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1911 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1912 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1913 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1914
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1915 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1916 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1917
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1918 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1919 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1920
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1921
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1922 def test_decode_brainix(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1923 brainix = [
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1924 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1925 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1926 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1927 ]
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1928 h = '6fb11b932d535c2be04beabd99793ff8'
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1929 maxValue = 426.0
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1930
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1931 truth = Image.open(GetDatabasePath('Formats/Brainix.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1932 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1933 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1934 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1935
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1936 truth2 = map(lambda x: min(255, x), truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1937 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1938 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1939
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1940 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1941 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1942 self.AssertSameImages(truth2, '/instances/%s/preview' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1943
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1944 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1945 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1946
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1947
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1948 def test_decode_color(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1949 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1950 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1951
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1952 for i in [ imagej, color ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1953 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1954 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1955
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1956 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1957 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1958
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1959 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1960 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1961
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1962
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1963 def test_decode_rf(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1964 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1965 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1966
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1967 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1968 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1969 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1970 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1971
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1972 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1973
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1974
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1975 def test_decode_multiframe(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1976 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1977
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1978 # Test the first frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1979 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1980 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1981 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1982 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1983 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1984 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1985
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1986 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1987
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1988 # Test the last frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1989 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1990 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1991
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1992
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1993 def test_decode_signed(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1994 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1995 minValue = -2000
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1996 maxValue = 4042
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1997
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1998 truth = Image.open(GetDatabasePath('Formats/SignedCT.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1999 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2000
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2001 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2002 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2003
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2004 truth3 = map(lambda x: 255 if x >= 256 else x, truth2)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2005 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2006
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2007 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2008 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2009 self.AssertSameImages(tmp, '/instances/%s/preview' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2010
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2011 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed)))
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2012
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2013
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
2014 def test_googlecode_issue_32(self):
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2015 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2016 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2017 self.assertEqual(u'Рентгенография', tags['SeriesDescription'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2018 self.assertEqual(u'Таз', tags['BodyPartExamined'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2019 self.assertEqual(u'Прямая', tags['ViewPosition'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2020
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2022 def test_encodings(self):
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2023 # Latin-1 (ISO_IR 100)
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2024 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2025 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2026 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription'])
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2027
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2028 # Latin-2 (ISO_IR 101)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2029 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID']
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2030 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2031 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format -
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2032 self.assertEqual('Imię i Nazwisko osoby opisującej',
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2033 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8'))
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2034
26
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2035
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2036 def test_storescu_custom_aet(self):
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2037 # This tests a feature introduced in Orthanc 0.9.1: "Custom
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2038 # setting of the local AET during C-Store SCU (both in Lua and
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2039 # in the REST API)."
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2040 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2041
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2042 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2043
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2044 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2045 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2046 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2047
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2048 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2049 'LocalAet' : 'YOP',
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2050 'Resources' : [ a['ID'], b['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2051 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2052
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2053 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2054 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2055
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2056 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2057 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2058
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2059 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2060 'Resources' : [ c['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2061 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2062
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2063 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2064 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2065
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2066 DropOrthanc(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2067 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2068
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2069 InstallLuaScript('Lua/AutoroutingChangeAet.lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2070 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2071
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2072 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2073 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2074 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2075 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2076 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2077
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2078 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2079 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2080 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2081 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2082 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID']))
34
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2083
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2084 def test_resources_since_limit(self):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2085 # Upload 16 instances
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2086 for i in range(4):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2087 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2088 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2089 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2090 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2091
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2092 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2093 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2094 self.assertEqual(4, len(DoGet(_REMOTE, '/series')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2095 self.assertEqual(16, len(DoGet(_REMOTE, '/instances')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2096
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2097 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2098 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2099
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2100 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2101 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2102 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2103 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2104 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2105 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2106 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2107 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2108 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2109 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2110 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2111 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2112 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2113 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2114 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2115
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2116 for limit in [ 1, 2, 3, 7, 16, 17 ]:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2117 s = {}
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2118 since = 0
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2119 while True:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2120 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2121 if len(t) == 0:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2122 break
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2123
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2124 since += len(t)
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2125 for i in t:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2126 s[i] = None
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2127
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2128 self.assertEqual(16, len(s))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2129 for instance in DoGet(_REMOTE, '/instances'):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2130 self.assertTrue(instance in s)
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2131
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2132
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2133 def test_create_pdf(self):
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2134 # Upload 4 instances
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2135 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2136 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2137 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2138 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2139
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2140 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2141 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2142 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2143
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2144 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f:
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2145 pdf = f.read()
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2146
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2147 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2148 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2149 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2150 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2151 'Modality' : 'CT',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2152 },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2153 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2154 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2155
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2156 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2157 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2158
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2159 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2160 self.assertEqual(len(b), len(pdf) + 1)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2161 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0'))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2162
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2163 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2164 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2165 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2166 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2167 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2168 }
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2169 })))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2170
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2171 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2172 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2173 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2174 'Tags' : { 'StudyDescription' : 'PDF^Patient' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2175 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2176 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2177
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2178 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2179
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2180 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2181 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2182 'Parent' : brainixStudy,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2183 'Tags' : { 'SeriesDescription' : 'PDF^Study' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2184 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2185 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2186
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2187 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2188
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2189 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2190 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2191 'Parent' : brainixEpi,
37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 36
diff changeset
2192 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' },
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2193 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2194 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2195
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2196 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2197
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2198 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2199 self.assertEqual(len(b), len(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2200 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2201
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2202 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance))
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2203
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2204
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2205 def test_create_series(self):
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2206 i = DoPost(_REMOTE, '/tools/create-dicom',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2207 json.dumps({
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2208 'Tags' : {
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2209 'SpecificCharacterSet' : 'ISO_IR 100',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2210 'PatientName' : 'Sébastien Jodogne',
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2211 'Modality' : 'CT',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2212 },
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2213 'Content' : [
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2214 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2215 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2216 'Tags' : { 'ImageComments' : 'Tutu' }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2217 },
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2218 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2219 ]
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2220 }))
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2221
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2222 s = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2223 self.assertEqual('Series', s['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2224 self.assertEqual(s['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2225 self.assertEqual(2, len(s['Instances']))
39
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2226 self.assertEqual(2, s['ExpectedNumberOfInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2227 self.assertEqual('Complete', s['Status'])
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2228
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2229 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2230 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2231 self.assertTrue('ImageComments' in a or 'ImageComments' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2232 if 'ImageComments' in a:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2233 self.assertEqual('Tutu', a['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2234 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2235 self.assertEqual('Tutu', b['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2237 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2238 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2239 'Sébastien Jodogne')
47
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2240
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2241
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2242 def test_create_binary(self):
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2243 binary = ''.join(map(chr, range(256)))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2244 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary)
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2245 tags = {
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2246 'PatientName' : 'Jodogne',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2247 '8899-8899' : encoded
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2248 }
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2249
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2250 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2251 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2252 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2253 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2254
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2255 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2256 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2257
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2258 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2259 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2260 'InterpretBinaryTags' : False,
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2261 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2262 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2263
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2264 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2265 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1])
48
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2266
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2267
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2268 def test_patient_ids_collision(self):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2269 # Upload 3 instances from 3 different studies, but with the
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2270 # same PatientID
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2271 for i in range(3):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2272 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2273
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2274 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2275 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2276 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2277 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2278
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2279 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2280 'CaseSensitive' : True,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2281 'Query' : { 'PatientName' : 'FOO\\HELLO' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2282 self.assertEqual(2, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2283
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2284 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2285 'CaseSensitive' : False,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2286 'Query' : { 'PatientName' : 'Foo' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2287 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2288 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2289 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2290 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2291
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2292 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2293 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2294 self.assertEqual(3, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2295 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2296 self.assertTrue('FOO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2297 self.assertTrue('HELLO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2298 self.assertTrue('WORLD^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2299
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2300 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2301 self.assertEqual(1, len(set(d)))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2302 self.assertEqual('COMMON', d[0])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2303
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2304 for i in a:
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2305 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2306 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2307 self.assertEqual('%s^SERIES' % p, d)
49
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2308
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2309
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2310 def test_bitbucket_issue_4(self):
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2311 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2312 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2313 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2314 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2315 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2316 UploadInstance(_REMOTE, 'Formats/Rle.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2317
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2318 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2319 self.assertEqual(6, len(DoGet(_REMOTE, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2320
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2321 p = DoGet(_REMOTE, '/patients')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2322 self.assertEqual(2, len(p))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2323 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2324 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2325 self.assertEqual(3, len(i1))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2326 self.assertEqual(3, len(i2))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2327
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2328 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3])
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2329
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2330 self.assertEqual(6, len(DoGet(_LOCAL, '/instances')))
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2331
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2332
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2333 def test_create_sequence(self):
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2334 i = DoPost(_REMOTE, '/tools/create-dicom',
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2335 json.dumps({
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2336 'Tags' : {
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2337 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2338 'PatientName': 'Jodogne^',
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2339 'ReferencedStudySequence': GenerateTestSequence(),
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2340 }
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2341 }))['ID']
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2342
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2343 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2344 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2345 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2346 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2347 self.assertEqual(u'Sébastien^'.encode('latin-1'),
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2348 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i))
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2349
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2350
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2351 def test_modify_sequence(self):
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2352 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2353 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i))
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2354
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2355 j = DoPost(_REMOTE, '/instances/%s/modify' % i,
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2356 json.dumps({
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2357 "Replace" : {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2358 "PatientName" : "hello",
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2359 'ReferencedStudySequence': GenerateTestSequence(),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2360 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2361 }),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2362 'application/json')
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2363 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2364 DoDelete(_REMOTE, '/instances/%s' % i)
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2365
52
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2366 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j)))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2367
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2368
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2369 def test_compression(self):
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2370 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2371
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2372 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % i)[1]
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2373
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2374 # "StorageCompression" is enabled in the Orthanc to be tested,
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2375 # uncompress the data before running the test
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2376 if DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i) != 0:
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2377 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2378
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2379 cs = DoGet(_REMOTE, '/statistics')['TotalDiskSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2380 us = DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2381 size = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2382 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2383 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2384 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2385 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2386
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2387 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2388 self.assertTrue('compress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2389 self.assertTrue('uncompress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2390 self.assertTrue('is-compressed' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2391 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2392 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2393
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2394 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/compress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2395 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2396 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2397 self.assertLess(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2398 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2399 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1]))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2400 self.assertGreater(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2401 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2402 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2403 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2404
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2405 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2406 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2407 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2408 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2409 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2410 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2411 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2412 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2413 self.assertEqual(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2414 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2415
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2416
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2417 def test_ordered_slices(self):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2418 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2419 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2420 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2421 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2422 self.assertEqual(1, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2423 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2424 self.assertEqual(76, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2425 for j in range(76):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2426 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2427
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2428 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2429 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2430 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2431 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2432 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2433
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2434 self.assertEqual('Volume', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2435 self.assertEqual(3, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2436 self.assertEqual(3, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2437 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2438 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2439 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2440 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2441 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2442 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2443
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2444 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2445 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2446 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2447 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2448
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2449 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2450 self.assertEqual(2, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2451 self.assertEqual(2, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2452 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2453 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2454 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2455 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2456
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2457
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2458 def test_incoming_movescu_accession(self):
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2459 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2460
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2461 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2462 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2463 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2464 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2465 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2466 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=A10003245599' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2467 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2468
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2469
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2470 def test_dicom_to_json(self):
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2471 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2472
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2473 t = DoGet(_REMOTE, '/instances/%s/tags' % i)
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2474 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f:
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2475 self.assertEqual(json.loads(f.read()), t)
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2476
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2477 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2478 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f:
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2479 self.assertEqual(json.loads(f.read()), t)