annotate NewTests/helpers.py @ 649:5d7b6e43ab7d

updated copyright, as Orthanc Team now replaces Osimis
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 30 May 2024 21:51:11 +0200
parents 79812e0df162
children 8ba9b20ae95f bdb9763d53ff
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1 import unittest
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2 from orthanc_api_client import OrthancApiClient
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3 import subprocess
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4 import json
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5 import os
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6 import typing
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7 import shutil
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8 import glob
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9 import time
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10 from threading import Thread
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13 import pathlib
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14 here = pathlib.Path(__file__).parent.resolve()
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15
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16
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17 default_base_config = {
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18 "AuthenticationEnabled": False,
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19 "RemoteAccessAllowed": True
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20 }
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21
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22
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23 def get_container_health(container_name):
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24 try:
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25 # Run the docker inspect command
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26 result = subprocess.run(
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27 ["docker", "inspect", "--format", "{{.State.Health.Status}}", container_name],
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28 capture_output=True,
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29 text=True,
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30 check=True,
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31 )
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32
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33 # Extract the health status from the command output
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34 return result.stdout.strip()
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35
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36 except subprocess.CalledProcessError as e:
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37 print(f"Error checking container health: {e}")
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38 return None
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39
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40 def wait_container_healthy(container_name):
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41 retry = 0
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42
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43 while (get_container_health(container_name) != "healthy" and retry < 200):
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44 print(f"Waiting for {container_name} to be healty")
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45 time.sleep(1)
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46
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48
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49 class Helpers:
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50
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51 orthanc_under_tests_hostname: str = 'localhost'
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52 orthanc_under_tests_http_port: int = 8052
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53 orthanc_under_tests_dicom_port: int = 4252
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54 orthanc_under_tests_exe: str = None
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55 orthanc_previous_version_exe: str = None
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56 orthanc_under_tests_docker_image: str = None
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57 skip_preparation: bool = False
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58 break_after_preparation: bool = False
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59 break_before_preparation: bool = False
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60 plugins: typing.List[str] = []
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61
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62 @classmethod
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63 def get_orthanc_url(cls):
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64 return f"http://{cls.orthanc_under_tests_hostname}:{cls.orthanc_under_tests_http_port}"
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65
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66 @classmethod
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67 def get_orthanc_ip(cls):
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68 return cls.orthanc_under_tests_hostname
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69
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70 @classmethod
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71 def get_orthanc_dicom_port(cls):
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72 return cls.orthanc_under_tests_dicom_port
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73
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74 @classmethod
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75 def is_docker(cls):
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76 return cls.orthanc_under_tests_exe is None and cls.orthanc_under_tests_docker_image is not None
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77
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78 @classmethod
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79 def is_exe(cls):
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80 return cls.orthanc_under_tests_exe is not None and cls.orthanc_under_tests_docker_image is None
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82 @classmethod
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83 def find_executable(cls, name):
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84 p = os.path.join('/usr/local/bin', name)
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85 if os.path.isfile(p):
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86 return p
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87
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88 p = os.path.join('/usr/local/sbin', name)
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89 if os.path.isfile(p):
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90 return p
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91
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92 return name
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93
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94
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95 class OrthancTestCase(unittest.TestCase):
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96
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97 o: OrthancApiClient = None # the orthanc under tests api client
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98 _orthanc_process = None
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99 _orthanc_container_name = None
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100 _orthanc_is_running = False
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101 _orthanc_logger_thread = None
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102 _show_orthanc_output = False
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103
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104 @classmethod
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105 def setUpClass(cls):
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106
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107 cls.o = OrthancApiClient(Helpers.get_orthanc_url())
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108 cls._prepare()
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109
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110 @classmethod
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111 def tearDownClass(cls):
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112 if not Helpers.break_after_preparation:
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113 cls.kill_orthanc()
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114 cls.terminate()
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115
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116 @classmethod
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117 def prepare(cls):
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118 pass # to override
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119
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120 @classmethod
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121 def terminate(cls):
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122 pass # to override
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123
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124 @classmethod
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125 def _prepare(cls):
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126 if not Helpers.skip_preparation:
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127 cls.prepare()
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128
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129 @classmethod
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130 def get_storage_path(cls, storage_name: str):
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131 return str(here / "storages" / f"{storage_name}")
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132
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133 @classmethod
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134 def generate_configuration(cls, config_name: str, config: object, storage_name: str, plugins = []):
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135
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136 # add plugins and default storge directory
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137 if plugins and len(plugins) > 0:
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138 config["Plugins"] = plugins
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139
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140 if Helpers.is_exe() and not "StorageDirectory" in config:
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141 config["StorageDirectory"] = cls.get_storage_path(storage_name=storage_name)
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142
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143 if not "Name" in config:
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144 config["Name"] = config_name
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145
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146 if not "HttpPort" in config:
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147 config["HttpPort"] = Helpers.orthanc_under_tests_http_port
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148
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149 if not "DicomPort" in config:
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150 config["DicomPort"] = Helpers.orthanc_under_tests_dicom_port
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151
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152 # copy the values from the base config
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153 for k, v in default_base_config.items():
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154 if not k in config:
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155 config[k] = v
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156
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157 # save to disk
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158 path = str(here / "configurations" / f"{config_name}.json")
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159 with open(path, "w") as f:
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160 json.dump(config, f, indent=4)
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161
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162 return path
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163
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164 @classmethod
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165 def clear_storage(cls, storage_name: str):
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166 storage_path = cls.get_storage_path(storage_name=storage_name)
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167 if Helpers.is_exe():
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168
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169 # clear the directory but keep it !
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170 for root, dirs, files in os.walk(storage_path):
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171 for f in files:
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172 os.unlink(os.path.join(root, f))
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173 for d in dirs:
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174 shutil.rmtree(os.path.join(root, d))
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175 shutil.rmtree(storage_path, ignore_errors=True)
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176 else:
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177 cmd = [
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178 "docker", "run", "--rm",
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179 "-v", f"{storage_path}:/var/lib/orthanc/db/",
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180 "--name", "storage-cleanup",
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181 "debian:12-slim",
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182 "rm", "-rf", "/var/lib/orthanc/db/*"
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183 ]
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184
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185 subprocess.run(cmd, check=True)
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186
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187 @classmethod
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188 def is_storage_empty(cls, storage_name: str):
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189 storage_path = cls.get_storage_path(storage_name=storage_name)
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190 return len(glob.glob(os.path.join(storage_path, '*'))) == 0
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191
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192 @classmethod
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193 def create_docker_network(cls, network: str):
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194 if Helpers.is_docker():
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195 subprocess.run(["docker", "network", "rm", network]) # ignore error
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196 subprocess.run(["docker", "network", "create", network])
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197
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198 @classmethod
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199 def launch_orthanc_to_prepare_db(cls, config_name: str = None, config: object = None, config_path: str = None, storage_name: str = None, plugins = []):
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200 if config_name and storage_name and config:
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201 # generate the configuration file
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202 config_path = cls.generate_configuration(
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203 config_name=config_name,
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204 storage_name=storage_name,
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205 config=config,
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206 plugins=plugins
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207 )
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208 elif not config_path or not storage_name or not config_name:
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209 raise RuntimeError("Invalid configuration")
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210
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211 # run orthanc
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212 if Helpers.orthanc_previous_version_exe:
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213 cls.launch_orthanc_exe(
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214 exe_path=Helpers.orthanc_previous_version_exe,
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215 config_path=config_path
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216 )
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217 elif Helpers.orthanc_previous_version_docker_image:
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218 cls.launch_orthanc_docker(
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219 docker_image=Helpers.orthanc_previous_version_docker_image,
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220 storage_name=storage_name,
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221 config_name=config_name,
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222 config_path=config_path
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223 )
473
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224 else:
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225 raise RuntimeError("Invalid configuration, can not launch Orthanc")
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226
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227 @classmethod
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228 def launch_orthanc_under_tests(cls, config_name: str = None, config: object = None, config_path: str = None, storage_name: str = None, plugins = [], docker_network: str = None, enable_verbose: bool = False, show_orthanc_output: bool = False):
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229 cls._show_orthanc_output = show_orthanc_output
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230
474
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231 if config_name and storage_name and config:
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232 # generate the configuration file
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233 config_path = cls.generate_configuration(
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234 config_name=config_name,
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235 storage_name=storage_name,
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236 config=config,
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237 plugins=plugins
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238 )
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239 elif not config_path or not storage_name or not config_name:
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240 raise RuntimeError("Invalid configuration")
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241
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242 # run orthanc
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243 if Helpers.orthanc_under_tests_exe:
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244 cls.launch_orthanc_exe(
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245 exe_path=Helpers.orthanc_under_tests_exe,
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246 config_path=config_path,
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247 enable_verbose=enable_verbose
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248 )
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249 elif Helpers.orthanc_under_tests_docker_image:
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250 cls.launch_orthanc_docker(
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251 docker_image=Helpers.orthanc_under_tests_docker_image,
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252 storage_name=storage_name,
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253 config_name=config_name,
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254 config_path=config_path,
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255 network=docker_network,
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256 enable_verbose=enable_verbose
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257 )
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258 else:
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259 raise RuntimeError("Invalid configuration, can not launch Orthanc")
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260
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261 @classmethod
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262 def launch_orthanc_exe(cls, exe_path: str, config_path: str, enable_verbose: bool = False, show_orthanc_output: bool = False):
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263 if enable_verbose:
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264 cmd = [exe_path, "--verbose", config_path]
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265 else:
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266 cmd = [exe_path, config_path]
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267
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268 cls._orthanc_process = subprocess.Popen(
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269 cmd,
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270 stdout=subprocess.PIPE,
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271 stderr=subprocess.PIPE
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272 )
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273
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274 cls.o.wait_started(10)
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275 if not cls.o.is_alive():
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276 output = cls.get_orthanc_process_output()
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277 print("Orthanc output\n" + output)
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278
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279 raise RuntimeError(f"Orthanc failed to start '{exe_path}', conf = '{config_path}'. Check output above")
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280
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281 @classmethod
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282 def launch_orthanc_docker(cls, docker_image: str, storage_name: str, config_path: str, config_name: str, network: str = None, enable_verbose: bool = False):
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283 storage_path = cls.get_storage_path(storage_name=storage_name)
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284
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285 cmd = [
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286 "docker", "run", "--rm",
592
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287 "-e", "VERBOSE_ENABLED=true" if enable_verbose else "VERBOSE_ENABLED=false",
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288 "-e", "VERBOSE_STARTUP=true" if enable_verbose else "VERBOSE_STARTUP=false",
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289 "-v", f"{config_path}:/etc/orthanc/orthanc.json",
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290 "-v", f"{storage_path}:/var/lib/orthanc/db/",
474
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291 "--name", config_name,
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292 "-p", f"{Helpers.orthanc_under_tests_http_port}:{Helpers.orthanc_under_tests_http_port}",
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293 "-p", f"{Helpers.orthanc_under_tests_dicom_port}:{Helpers.orthanc_under_tests_dicom_port}"
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294 ]
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295 if network:
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296 cmd.extend(["--network", network])
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297 cmd.append(docker_image)
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298
474
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299 cls._orthanc_container_name = config_name
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300 print("docker cmd line: " + " ".join(cmd))
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301
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302 cls._orthanc_process = subprocess.Popen(
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303 cmd,
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304 stdout=subprocess.PIPE,
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305 stderr=subprocess.PIPE
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306 )
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307
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308 cls.o.wait_started(10)
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309 if not cls.o.is_alive():
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310 output = cls.get_orthanc_process_output()
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311 print("Orthanc output\n" + output)
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312
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313 raise RuntimeError(f"Orthanc failed to start Orthanc through Docker '{docker_image}', conf = '{config_path}'. Check output above")
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314
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315
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316 @classmethod
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317 def kill_orthanc(cls):
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318 if Helpers.is_exe():
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319 if cls._orthanc_process:
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320 cls._orthanc_process.kill()
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321 else:
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322 return
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323 else:
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324 subprocess.run(["docker", "stop", cls._orthanc_container_name])
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325
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326 if cls._show_orthanc_output:
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327 output = cls.get_orthanc_process_output()
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328 print("Orthanc output\n" + output)
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329
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330 cls._orthanc_process = None
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331
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332 @classmethod
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333 def get_orthanc_process_output(cls):
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334 outputs = cls._orthanc_process.communicate()
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335 output = ""
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336 for o in outputs:
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337 output += o.decode('utf-8')
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338 return output