Mercurial > hg > orthanc-tests

annotate NewTests/WithIngestTranscoding/test_with_ingest_transcoding.py @ 618:4b3d13e498a5

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force running docker as 999:999
author Alain Mazy <am@osimis.io>
date Mon, 05 Feb 2024 16:42:37 +0100
parents 2170c10f9d49
children
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1 import unittest
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2 import time
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3 import os
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4 from helpers import OrthancTestCase, Helpers
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5
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6 from orthanc_api_client import OrthancApiClient, generate_test_dicom_file
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7 from orthanc_tools import OrthancTestDbPopulator
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8
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9 import pathlib
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10 import glob
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11 import pprint
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12
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13 here = pathlib.Path(__file__).parent.resolve()
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14
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15
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16 class TestWithIngestTranscoding(OrthancTestCase):
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17
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18 @classmethod
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19 def prepare(cls):
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20 print('-------------- preparing TestWithIngestTranscoding tests')
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21
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22 cls.clear_storage(storage_name="WithIngestTranscoding")
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23
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24 config = {
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25 "IngestTranscoding": "1.2.840.10008.1.2.4.70"
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26 }
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27
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28 config_path = cls.generate_configuration(
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29 config_name="with_ingest_transcoding",
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30 storage_name="WithIngestTranscoding",
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31 config=config,
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32 plugins=Helpers.plugins
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33 )
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34
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35 print('-------------- prepared TestWithIngestTranscoding tests')
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36 if Helpers.break_after_preparation:
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37 print(f"++++ It is now time to start your Orthanc under tests with configuration file '{config_path}' +++++")
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38 input("Press Enter to continue")
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39 else:
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40 print('-------------- launching TestWithIngestTranscoding tests')
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41 cls.launch_orthanc_under_tests(
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42 config_path=config_path,
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43 config_name="with_ingest_transcoding",
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44 storage_name="WithIngestTranscoding",
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45 plugins=Helpers.plugins
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46 )
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47
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48 print('-------------- waiting for orthanc-under-tests to be available')
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49 cls.o.wait_started()
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50
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51 def test_modify(self):
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52 self.o.delete_all_content()
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53
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54 # upload a study
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55 self.o.upload_file(here / "../../Database/Brainix/Flair/IM-0001-0001.dcm")
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56
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57 # first modify it without transcoding
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58 r = self.o.post(
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59 endpoint="studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988/modify",
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60 json={
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61 "Replace": {"PatientID": "TUTU"},
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62 "Force": True,
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63 "KeepSource": True,
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64 "Synchronous": True
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65 }
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66 ).json()
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67
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68 study_id = r['ID']
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69 instance_id = self.o.studies.get_first_instance_id(orthanc_id=study_id)
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70
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71 r = self.o.get(
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72 endpoint=f"instances/{instance_id}/metadata?expand"
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73 ).json()
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74 self.assertEqual("1.2.840.10008.1.2.4.70", r['TransferSyntax'])
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75 self.o.studies.delete(orthanc_id=study_id)
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76
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77 # first modify it with transcoding -> IngestTranscoding shall not be applied
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78 r = self.o.post(
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79 endpoint="studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988/modify",
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80 json={
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81 "Replace": {"PatientID": "TUTU"},
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82 "Force": True,
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83 "KeepSource": True,
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84 "Synchronous": True,
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85 "Transcode": "1.2.840.10008.1.2.4.80"
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86 }
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87 ).json()
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88
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89 instance_id = self.o.studies.get_first_instance_id(orthanc_id=r['ID'])
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90
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91 r = self.o.get(
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92 endpoint=f"instances/{instance_id}/metadata?expand"
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93 ).json()
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94 self.assertEqual("1.2.840.10008.1.2.4.80", r['TransferSyntax'])
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95
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96
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97 def test_anonymize(self):
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98 self.o.delete_all_content()
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99
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100 # upload a study
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101 self.o.upload_file(here / "../../Database/Brainix/Flair/IM-0001-0001.dcm")
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102
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103 # first anonymize it without transcoding
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104 r = self.o.post(
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105 endpoint="studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988/anonymize",
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106 json={
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107 "Synchronous": True
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108 }
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109 ).json()
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110
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111 study_id = r['ID']
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112 instance_id = self.o.studies.get_first_instance_id(orthanc_id=study_id)
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113
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114 r = self.o.get(
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115 endpoint=f"instances/{instance_id}/metadata?expand"
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116 ).json()
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117 self.assertEqual("1.2.840.10008.1.2.4.70", r['TransferSyntax'])
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118 self.o.studies.delete(orthanc_id=study_id)
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119
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120 # first anonymize it with transcoding -> IngestTranscoding shall not be applied
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121 r = self.o.post(
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122 endpoint="studies/27f7126f-4f66fb14-03f4081b-f9341db2-53925988/anonymize",
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123 json={
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124 "Synchronous": True,
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125 "Transcode": "1.2.840.10008.1.2.4.80"
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126 }
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127 ).json()
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128
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129 instance_id = self.o.studies.get_first_instance_id(orthanc_id=r['ID'])
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130
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131 r = self.o.get(
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132 endpoint=f"instances/{instance_id}/metadata?expand"
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133 ).json()
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134 self.assertEqual("1.2.840.10008.1.2.4.80", r['TransferSyntax'])