annotate Tests/Tests.py @ 219:00e5aeea33dd

test_bitbucket_issue_131
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 24 Feb 2019 08:50:02 +0100
parents 70fba41776be
children 7b1c976caa9b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
1 #!/usr/bin/env python
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2 # -*- coding: utf-8 -*-
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
4
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
5 # Orthanc - A Lightweight, RESTful DICOM Store
73
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
6 # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 # Department, University Hospital of Liege, Belgium
195
af8e034f4262 preparing for 2019
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 194
diff changeset
8 # Copyright (C) 2017-2019 Osimis S.A., Belgium
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 #
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 # This program is free software: you can redistribute it and/or
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 # modify it under the terms of the GNU General Public License as
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 # published by the Free Software Foundation, either version 3 of the
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 # License, or (at your option) any later version.
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 #
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 # This program is distributed in the hope that it will be useful, but
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 # WITHOUT ANY WARRANTY; without even the implied warranty of
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 # General Public License for more details.
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 #
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 # You should have received a copy of the GNU General Public License
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 # along with this program. If not, see <http://www.gnu.org/licenses/>.
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23
202
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
24 import base64
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
25 import copy
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
26 import pprint
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
27 import tempfile
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 import unittest
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
30 from PIL import ImageChops
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 from Toolbox import *
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
32 from xml.dom import minidom
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 _LOCAL = None
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 _REMOTE = None
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 def SetOrthancParameters(local, remote):
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 global _LOCAL, _REMOTE
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 _LOCAL = local
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 _REMOTE = remote
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
44 def ExtractDicomTags(rawDicom, tags):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
45 with tempfile.NamedTemporaryFile(delete = True) as f:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
46 f.write(rawDicom)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
47 f.flush()
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
48 data = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
49
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
50 result = []
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
51 for tag in tags:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
52 match = re.search('<element[^>]+name="%s">([^>]*)</element>' % tag, data)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
53 if match == None:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
54 result.append('')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
55 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
56 result.append(match.group(1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
57
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
58 return result
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
59
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
60
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
61 def CompareLists(a, b):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
62 if len(a) != len(b):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
63 return False
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
64
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
65 for i in range(len(a)):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
66 d = a[i] - b[i]
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
67 if abs(d) >= 0.51: # Add some tolerance for rounding errors
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
68 return False
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
69
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
70 return True
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
71
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
72
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
73 def CompareTags(a, b, tagsToIgnore):
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
74 for i in tagsToIgnore:
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
75 if i in a:
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
76 del a[i]
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
77 if i in b:
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
78 del b[i]
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
79
123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
80 if a.keys() == b.keys():
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
81 return True
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
82 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
83 print('Mismatch in tags: %s' % str(set(a.keys()) ^ set(b.keys())))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
84 return False
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
85
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
86
71
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
87 def CallFindScu(args):
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
88 p = subprocess.Popen([ FindExecutable('findscu'),
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
89 '-P', '-aec', _REMOTE['DicomAet'], '-aet', _LOCAL['DicomAet'],
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
90 _REMOTE['Server'], str(_REMOTE['DicomPort']) ] + args,
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
91 stderr=subprocess.PIPE)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
92 return p.communicate()[1]
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
93
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
94
142
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
95 def GetMoveScuCommand():
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
96 return [
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
97 FindExecutable('movescu'),
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
98 '--move', _LOCAL['DicomAet'], # Target AET (i.e. storescp)
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
99 '--call', _REMOTE['DicomAet'], # Called AET (i.e. Orthanc)
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
100 '--aetitle', _LOCAL['DicomAet'], # Calling AET (i.e. storescp)
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
101 _REMOTE['Server'],
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
102 str(_REMOTE['DicomPort'])
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
103 ]
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
104
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
105 def CallMoveScu(args):
142
6d2bfbbd0c2d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 141
diff changeset
106 subprocess.check_call(GetMoveScuCommand() + args,
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
107 stderr=subprocess.PIPE)
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
108
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
109
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
110
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
111 def GenerateTestSequence():
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
112 return [
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
113 {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
114 'StudyDescription': 'Hello^',
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
115 'ReferencedStudySequence' : [
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
116 {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
117 'StudyDescription': 'Toto',
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
118 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
119 {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
120 'StudyDescription': 'Tata',
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
121 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
122 ]
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
123 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
124 {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
125 'StudyDescription': 'Sébastien^',
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
126 'StudyDate' : '19700202',
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
127 }
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
128 ]
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
129
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
130
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
131
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
132
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
133 class Orthanc(unittest.TestCase):
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
134 def setUp(self):
83
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
135 if (sys.version_info >= (3, 0)):
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
136 # Remove annoying warnings about unclosed socket in Python 3
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
137 import warnings
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
138 warnings.simplefilter("ignore", ResourceWarning)
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
139
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
140 DropOrthanc(_LOCAL)
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
141 DropOrthanc(_REMOTE)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
142 UninstallLuaCallbacks(_REMOTE)
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
143 #print "In test", self._testMethodName
44
ffa542cce638 Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 43
diff changeset
144
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
145 def AssertSameImages(self, truth, url):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
146 im = GetImage(_REMOTE, url)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
147 self.assertTrue(CompareLists(truth, im.getdata()))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
148
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
149
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
150 def test_system(self):
177
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
151 self.assertTrue('Version' in DoGet(_REMOTE, '/system'))
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
152 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
153 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
154
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
155 systemInfo = DoGet(_REMOTE, '/system')
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
156 if systemInfo["Version"] == "mainline":
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
157 print "Skipping version checks since you're currently in mainline"
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
158 return
ef6b791c6d62 fix version checks
am@osimis.io
parents: 176
diff changeset
159
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
160 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 8, 6))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
161 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 8, 7))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
162 self.assertTrue(IsOrthancVersionAbove(_LOCAL, 0, 7, 6))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
163 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 0, 9, 6))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
164 self.assertFalse(IsOrthancVersionAbove(_LOCAL, 1, 8, 6))
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
165
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166 def test_upload(self):
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
167 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
168 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
169
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
170 sizeDummyCT = 2472
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
171 sizeOverwrite = 2476
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
172 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d'
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
173
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
174 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
183
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
175 self.assertEqual(instance, u['ID'])
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
176 self.assertEqual('Success', u['Status'])
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
177
183
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
178 if True:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
179 # New test for Orthanc 1.4.3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
180 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', u['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
181 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', u['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
182 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', u['ParentPatient'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 182
diff changeset
183
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
184 j = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
185 s = sizeDummyCT + j
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
186 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
187 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
188
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
189 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
190 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
191 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
192 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
193 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
194 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
195 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
196
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
197 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance)
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
198 self.assertEqual('20070101', i['StudyDate'])
173
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
199 self.assertEqual('KNIX', i['PatientName'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
200
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
201 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2):
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
202 # Overwriting
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
203 self.assertEqual('Success', u['Status'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
204 else:
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
205 self.assertEqual('AlreadyStored', u['Status'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
206
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
207 u = UploadInstance(_REMOTE, 'DummyCT-overwrite.dcm')
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
208 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
209 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
210 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
211 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
212
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
213 if IsOrthancVersionAbove(_REMOTE, 1, 4, 2):
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
214 # Overwriting
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
215 self.assertEqual('Success', u['Status'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
216 j2 = int(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % instance))
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
217 s2 = sizeOverwrite + j2
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
218 self.assertNotEqual(s, s2)
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
219 self.assertNotEqual(j, j2)
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
220 self.assertEqual('%d' % s2, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
221 self.assertEqual('%d' % s2, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
222 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % instance)
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
223 self.assertEqual('ANOTHER', i['PatientName'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
224 else:
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
225 self.assertEqual('AlreadyStored', u['Status'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
226 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
ed3db6386587 testing overwrite
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 154
diff changeset
227 self.assertEqual('%d' % s, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
228
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
229 def test_upload_2(self):
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
230 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
231 instance = DoGet(_REMOTE, '/instances/%s' % i)
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
232 self.assertEqual(i, instance['ID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
233 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
234 instance['MainDicomTags']['SOPInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
235
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
236 series = DoGet(_REMOTE, '/series/%s' % instance['ParentSeries'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
237 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
238 series['MainDicomTags']['SeriesInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
239
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
240 study = DoGet(_REMOTE, '/studies/%s' % series['ParentStudy'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
241 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
242 study['MainDicomTags']['StudyInstanceUID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
243
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
244 patient = DoGet(_REMOTE, '/patients/%s' % study['ParentPatient'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
245 self.assertEqual('ozp00SjY2xG',
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
246 patient['MainDicomTags']['PatientID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
247
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
248 dicom = DoGet(_REMOTE, '/instances/%s/file' % instance['ID'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249 self.assertEqual(2472, len(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 self.assertEqual('3e29b869978b6db4886355a2b1132124', ComputeMD5(dicom))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)['StationName'])
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags' % i)['0008,1010']['Value'])
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
254 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['StationName'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
255 self.assertEqual('TWINOW', DoGet(_REMOTE, '/instances/%s/tags?short' % i)['0008,1010'])
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
258 def test_images(self):
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
259 i = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
260 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
3
2dbba2e6aa4b reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
261
5
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
262 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
263 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
264 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
265 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
266
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
267 im = GetImage(_REMOTE, '/instances/%s/image-uint8' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
268 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
269 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
270 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
271
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
272 im = GetImage(_REMOTE, '/instances/%s/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
273 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
274 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
275
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
276 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
277 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
278 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
279 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
280
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
281 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
282 self.assertEqual("L", im.mode)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
283 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
284 self.assertEqual(358, im.size[1])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
285
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
286 im = GetImage(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
287 self.assertEqual(512, im.size[0])
19eb87a45685 test_images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3
diff changeset
288 self.assertEqual(358, im.size[1])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
289
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
290 # This is Little Endian Explicit
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
291 self.assertEqual('1.2.840.10008.1.2.1', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID'])
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
292
6
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
293
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
294 def test_hierarchy(self):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
295 UploadFolder(_REMOTE, 'Brainix/Epi')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
296 UploadFolder(_REMOTE, 'Brainix/Flair')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
297 UploadFolder(_REMOTE, 'Knee/T1')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
298 UploadFolder(_REMOTE, 'Knee/T2')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
299
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
300 p = DoGet(_REMOTE, '/patients')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
301 s = DoGet(_REMOTE, '/studies')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
302 t = DoGet(_REMOTE, '/series')
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
303 self.assertEqual(2, len(p))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
304 self.assertEqual(2, len(s))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
305 self.assertEqual(4, len(t))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
306 self.assertEqual(94, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
307
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
308 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
309 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
310 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
311 brainixFlair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
312
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
313 kneePatient = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
314 kneeStudy = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
315 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
316 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59'
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
317
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
318 self.assertTrue(brainixPatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
319 self.assertTrue(kneePatient in p)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
320 self.assertTrue(brainixStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
321 self.assertTrue(kneeStudy in s)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
322 self.assertTrue(brainixEpi in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
323 self.assertTrue(brainixFlair in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
324 self.assertTrue(kneeT1 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
325 self.assertTrue(kneeT2 in t)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
326
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
327 self.assertEqual(44, len(DoGet(_REMOTE, '/patients/%s/instances' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
328 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
329 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % brainixPatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
330
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
331 self.assertEqual(50, len(DoGet(_REMOTE, '/patients/%s/instances' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
332 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/series' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
333 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/studies' % kneePatient)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
334
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
335 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
336 self.assertEqual(44, len(DoGet(_REMOTE, '/studies/%s/instances' % brainixStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
337
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
338 self.assertEqual(2, len(DoGet(_REMOTE, '/studies/%s/series' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
339 self.assertEqual(50, len(DoGet(_REMOTE, '/studies/%s/instances' % kneeStudy)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
340
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
341 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixEpi)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
342 self.assertEqual(22, len(DoGet(_REMOTE, '/series/%s/instances' % brainixFlair)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
343 self.assertEqual(24, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT1)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
344 self.assertEqual(26, len(DoGet(_REMOTE, '/series/%s/instances' % kneeT2)))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
345
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
346 for patient in p:
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
347 for study in DoGet(_REMOTE, '/patients/%s/studies' % patient):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
348 self.assertEqual(patient, study['ParentPatient'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
349 for series in DoGet(_REMOTE, '/studies/%s/series' % study['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
350 self.assertEqual(study['ID'], series['ParentStudy'])
211
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
351 self.assertEqual('Unknown', series['Status'])
6
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
352 for instance in DoGet(_REMOTE, '/series/%s/instances' % series['ID']):
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
353 self.assertEqual(series['ID'], instance['ParentSeries'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
354
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
355 self.assertEqual(json.dumps(DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance['ID'])),
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
356 json.dumps(DoGet(_REMOTE, '/instances/%s/tags' % instance['ID'])))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
357
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
358
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
359 r = DoDelete(_REMOTE, "/studies/%s" % brainixStudy)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
360 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
361 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
362 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
363 self.assertEqual(50, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
364 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
365
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
366 r = DoDelete(_REMOTE, "/series/%s" % kneeT2)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
367 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
368 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
369 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
370 self.assertEqual(24, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
371 self.assertEqual('Study', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
372 self.assertEqual(kneeStudy, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
373
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
374 r = DoDelete(_REMOTE, "/instances/%s" % DoGet(_REMOTE, '/instances')[0])['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
375 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
376 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
377 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
378 self.assertEqual(23, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
379 self.assertEqual('Series', r['Type'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
380 self.assertEqual(kneeT1, r['ID'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
381
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
382 r = DoDelete(_REMOTE, "/patients/%s" % kneePatient)['RemainingAncestor']
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
383 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
384 self.assertEqual(0, len(DoGet(_REMOTE, '/studies')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
385 self.assertEqual(0, len(DoGet(_REMOTE, '/series')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
386 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
387 self.assertEqual(None, r)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
388
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
389 DropOrthanc(_REMOTE)
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
390 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
6d645b3011e1 test_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5
diff changeset
391 self.assertEqual('0', DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
392
213
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
393 def test_delete_cascade(self):
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
394 # make sure deleting the last instance of a study deletes the series, study and patient
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
395
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
396 self.assertEqual(0, len(DoGet(_REMOTE, '/instances'))) # make sure orthanc is empty when starting the test
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
397 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
398 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
399 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
400 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
401 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
402
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
403 DoDelete(_REMOTE, '/instances/%s' % a)
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
404
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
405 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
406 self.assertEqual(0, len(DoGet(_REMOTE, '/series')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
407 self.assertEqual(0, len(DoGet(_REMOTE, '/studies')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
408 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
eba6b8c38eee added a delete_cascade test to reproduce an issue in our MSSQL plugin
amazy
parents: 211
diff changeset
409
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
410
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
411 def test_multiframe(self):
7
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
412 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
413 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % i)))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
414
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
415 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
416 self.assertEqual("L", im.mode)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
417 self.assertEqual(512, im.size[0])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
418 self.assertEqual(512, im.size[1])
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
419
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
420 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint8' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
421 DoGet(_REMOTE, '/instances/%s/frames/0/image-uint16' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
422 DoGet(_REMOTE, '/instances/%s/frames/75/preview' % i)
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
423 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/aaa/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
424 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/preview' % i))
302f06f3bba2 test_multi_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 6
diff changeset
425
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
426
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
427 def test_changes(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
428 # Check emptiness
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
429 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
430 self.assertEqual(0, len(c['Changes']))
202
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
431 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
432 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
433 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
434 self.assertEqual(0, len(c['Changes']))
202
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
435 #self.assertEqual(0, c['Last']) # Not true anymore for Orthanc >= 1.5.2
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
436 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
437
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
438 # Add 1 instance
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
439 i = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
440 c = DoGet(_REMOTE, '/changes')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
441 begin = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
442 self.assertEqual(4, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
443 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
444 self.assertEqual(c['Changes'][-1]['Seq'], c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
445
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
446 c = DoGet(_REMOTE, '/changes?last')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
447 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
448 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
449 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
450 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 1))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
451 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
452 self.assertEqual(begin, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
453 self.assertTrue(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
454 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 2))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
455 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
456 self.assertEqual(begin - 1, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
457 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
458 c = DoGet(_REMOTE, '/changes?limit=1&since=' + str(begin - 3))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
459 self.assertEqual(1, len(c['Changes']))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
460 self.assertEqual(begin - 2, c['Last'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
461 self.assertFalse(c['Done'])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
462
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
463 UploadFolder(_REMOTE, 'Knee/T1')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
464 UploadFolder(_REMOTE, 'Knee/T2')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
465 since = begin
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
466 countPatients = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
467 countStudies = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
468 countSeries = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
469 countInstances = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
470 completed = 0
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
471 while True:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
472 c = DoGet(_REMOTE, '/changes', { 'since' : since, 'limit' : 3 })
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
473 since = c['Last']
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
474 for i in c['Changes']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
475 if i['ResourceType'] == 'Instance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
476 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
477 if i['ResourceType'] == 'Patient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
478 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
479 if i['ResourceType'] == 'Study':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
480 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
481 if i['ResourceType'] == 'Series':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
482 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
483 if i['ChangeType'] == 'NewInstance':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
484 countInstances += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
485 if i['ChangeType'] == 'NewPatient':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
486 countPatients += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
487 if i['ChangeType'] == 'NewStudy':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
488 countStudies += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
489 if i['ChangeType'] == 'NewSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
490 countSeries += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
491 if i['ChangeType'] == 'CompletedSeries':
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
492 completed += 1
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
493 self.assertTrue('ID' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
494 self.assertTrue('Path' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
495 self.assertTrue('Seq' in i)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
496 if c['Done']:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
497 break
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
498
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
499 self.assertEqual(2 * 50, countInstances)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
500 self.assertEqual(2 * 1, countPatients)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
501 self.assertEqual(2 * 1, countStudies)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
502 self.assertEqual(2 * 2, countSeries)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
503 self.assertEqual(0, completed)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
504
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
505
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
506 def test_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
507 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
508 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
192
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
509 knee = 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
510
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
511 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee)
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
512 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
513
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
514 z = GetArchive(_REMOTE, '/studies/%s/archive' % DoGet(_REMOTE, '/studies')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
515 self.assertEqual(2, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
516
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
517 z = GetArchive(_REMOTE, '/series/%s/archive' % DoGet(_REMOTE, '/series')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
518 self.assertEqual(1, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
519
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
520 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
192
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
521 brainix = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
522
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
523 z = GetArchive(_REMOTE, '/patients/%s/archive' % knee)
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
524 self.assertEqual(2, len(z.namelist()))
192
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
525
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
526 z = PostArchive(_REMOTE, '/tools/create-archive', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
527 'Resources' : [ brainix, knee ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
528 })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
529 self.assertEqual(3, len(z.namelist()))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
530
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
531
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
532 def test_media_archive(self):
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
533 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
534 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
535
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
536 z = GetArchive(_REMOTE, '/patients/%s/media' % DoGet(_REMOTE, '/patients')[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
537 self.assertEqual(3, len(z.namelist()))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
538 self.assertTrue('IMAGES/IM0' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
539 self.assertTrue('IMAGES/IM1' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
540 self.assertTrue('DICOMDIR' in z.namelist())
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
541
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
542 try:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
543 os.remove('/tmp/DICOMDIR')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
544 except:
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
545 # The file does not exist
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
546 pass
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
547
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
548 z.extract('DICOMDIR', '/tmp')
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
549 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
550 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
551 self.assertEqual(3, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
552 self.assertTrue(a[0].startswith('Warning'))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
553 self.assertEqual('BasicDirectory', a[1])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
554 self.assertEqual('', a[2])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
555
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
556 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
557 stderr = subprocess.STDOUT).split('\n')
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
558 self.assertEqual(1, len(a))
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
559 self.assertEqual('', a[0])
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
560
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
561 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
8
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
562 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
563 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081909113806560', a) != None)
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
564
f8d781d1d267 test_changes, test_archive, test_media_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 7
diff changeset
565 os.remove('/tmp/DICOMDIR')
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
566
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
568 def test_protection(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
569 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
570 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
571 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
572 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
573 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
574 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
575 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
576 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
577 DoPut(_REMOTE, '/patients/%s/protected' % a, '1', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
578 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
579 DoPut(_REMOTE, '/patients/%s/protected' % a, '0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
580 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
581
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
582
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
583 def test_raw_tags(self):
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
584 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
585
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
586 dicom = DoGet(_REMOTE, '/instances/%s/file' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
587 self.assertEqual('1a7c56cb02d6e742cc9c856a8ac182e3', ComputeMD5(dicom))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
588
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
589 s = '/instances/%s/content/' % i
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
590
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
591 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, s + '0008-1010').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
592 self.assertRaises(Exception, lambda: DoGet(_REMOTE, s + '0008-1011'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
593
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
594 self.assertEqual('Abdomen', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/0/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
595 self.assertEqual('cla_3c', DoGet(_REMOTE, s + '7fe1-1001/0/7fe1-1008/8/7fe1-1057').strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
596
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
597 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
598 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
599 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
600 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
601
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
602 for i in DoGet(_REMOTE, '/instances'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
603 aid = DoGet(_REMOTE, '/instances/%s' % i)['MainDicomTags']['SOPInstanceUID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
604 self.assertEqual(aid, DoGet(_REMOTE, '/instances/%s/content/0008-0018' % i).replace(chr(0), ''))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
605
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
606
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
607 def test_raw_tags_mdn(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
608 # Bug reported by Cyril Paulus
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
609 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
610 self.assertAlmostEqual(0.000027, DoGet(_REMOTE, '/instances/%s/content/7053-1000' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
611
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
612
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
613 def test_modify_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
614 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
615 modified = DoPost(_REMOTE, '/instances/%s/modify' % i,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
616 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
617 "Replace" : {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
618 "PatientName" : "hello",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
619 #"PatientID" : "world"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
620 },
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
621 "Remove" : [ "StationName" ],
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
622 "RemovePrivateTags" : True
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
623 }),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
624 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
625 j = DoPost(_REMOTE, '/instances', modified, 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
626
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
627 self.assertNotEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
628 #self.assertNotEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % i).strip())
83
3f2170efa8d2 patches for python3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 81
diff changeset
629 self.assertEqual('LOGIQBOOK', DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i).strip())
10
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
630 DoGet(_REMOTE, '/instances/%s/content/6003-1010' % i) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
631
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
632 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
633 #self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/0010-0020' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
634 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
635 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/6003-1010' % j))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
636
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
637
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
638 def test_modify_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
639 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
640 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
641 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
642
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
643 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
644 newSeries = DoPost(_REMOTE, '/series/%s/modify' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
645 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
646 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
647
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
648 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
649 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
650 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
651 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
652 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
653 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
654 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
655
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
656 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
657 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
658
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
659
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
660 def test_modify_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
661 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
662 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
663 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
664 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
665
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
666 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
667 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
668 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
669 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
670
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
671 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['ModifiedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
672 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
673 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
674 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
675 ss = DoGet(_REMOTE, '/series/%s' % s)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
676 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
677 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
678
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
679 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
680 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
681 j = DoGet(_REMOTE, '/instances/%s' % i)['ModifiedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
682 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
683 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
684
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
685 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
686 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
687
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
688
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
689 def test_anonymize_series(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
690 # Upload 4 images from the same series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
691 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
692 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
693
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
694 origSeries = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
695 newSeries = DoPost(_REMOTE, '/series/%s/anonymize' % origSeries,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
696 '{}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
697 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
698
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
699 self.assertEqual(origSeries, DoGet(_REMOTE, '/series/%s' % newSeries)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
700 instances = DoGet(_REMOTE, '/series/%s' % newSeries)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
701 self.assertEqual(4, len(instances))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
702 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
703 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
704 self.assertEqual(newSeries, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
705 self.assertEqual(origSeries, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
706
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
707 DoGet(_REMOTE, '/instances/%s/content/0008-1010' % j)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
708 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/0008-1010' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
709
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
710
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
711 def test_anonymize_study(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
712 # Upload 4 images from the 2 series of the same study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
713 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
714 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
715 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
716
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
717 origStudy = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
718 newStudy = DoPost(_REMOTE,'/studies/%s/anonymize' % origStudy,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
719 '{"Replace":{"PatientName":"Jodogne"}}',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
720 'application/json')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
721
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
722 self.assertEqual(origStudy, DoGet(_REMOTE, '/studies/%s' % newStudy)['AnonymizedFrom'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
723 series = DoGet(_REMOTE, '/studies/%s' % newStudy)['Series']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
724 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
725 for s in series:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
726 ss = DoGet(_REMOTE, '/series/%s' % s)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
727 self.assertEqual(newStudy, DoGet(_REMOTE, '/series/%s' % s)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
728 self.assertEqual(origStudy, DoGet(_REMOTE, '/series/%s' % ss)['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
729
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
730 instances = DoGet(_REMOTE, '/series/%s' % s)['Instances']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
731 for i in instances:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
732 j = DoGet(_REMOTE, '/instances/%s' % i)['AnonymizedFrom']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
733 self.assertEqual(s, DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
734 self.assertEqual(ss, DoGet(_REMOTE, '/instances/%s' % j)['ParentSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
735
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
736 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 8
diff changeset
737 self.assertNotEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % j).strip())
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
738
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
739
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
740
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
741 def test_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
742 # Check emptiness
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
743 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
744 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
745 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
746 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
747 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
748 self.assertEqual(0, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
749 self.assertEqual(0, e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
750 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
751
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
752 # Add 1 instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
753 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
754 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
755
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
756 # Export the instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
757 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain') # instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
758 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
759 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
760 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
761 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
762
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
763 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
764 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
765 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
766 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
767 e = DoGet(_REMOTE, '/exports?limit=1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
768 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
769 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
770 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
771 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
772 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
773 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
774 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
775 seqInstance = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
776
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
777 # Export the series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
778 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
779
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
780 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
781 self.assertEqual(2, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
782 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
783 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
784 seqSeries = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
785 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
786 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
787 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
788 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
789 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
790 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
791 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
792 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
793 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
794 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
795 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
796 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
797 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
798
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
799 # Export the study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
800 j = DoPost(_REMOTE, '/modalities/orthanctest/store', 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
801 seqStudy = DoGet(_REMOTE, '/exports')['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
802
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
803 # Export the patient
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
804 j = DoPost(_REMOTE, '/modalities/orthanctest/store', '6816cb19-844d5aee-85245eba-28e841e6-2414fae2', 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
805 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
806 self.assertEqual(1, len(DoGet(_LOCAL, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
807 self.assertEqual(1, len(DoGet(_LOCAL, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
808 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
809
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
810 e = DoGet(_REMOTE, '/exports')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
811 self.assertEqual(4, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
812 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
813 self.assertEqual(e['Exports'][-1]['Seq'], e['Last'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
814 seqPatient = e['Last']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
815 self.assertNotEqual(seqInstance, seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
816 self.assertNotEqual(seqSeries, seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
817 self.assertNotEqual(seqStudy, seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
818 self.assertTrue(seqInstance < seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
819 self.assertTrue(seqSeries < seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
820 self.assertTrue(seqStudy < seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
821 e = DoGet(_REMOTE, '/exports?limit=1&since=0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
822 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
823 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
824 self.assertEqual(e['Exports'][-1]['Seq'], seqInstance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
825 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqInstance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
826 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
827 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
828 self.assertEqual(e['Exports'][-1]['Seq'], seqSeries)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
829 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqSeries))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
830 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
831 self.assertFalse(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
832 self.assertEqual(e['Exports'][-1]['Seq'], seqStudy)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
833 e = DoGet(_REMOTE, '/exports?limit=1&since=' + str(seqStudy))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
834 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
835 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
836 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
837 e = DoGet(_REMOTE, '/exports?last')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
838 self.assertEqual(1, len(e['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
839 self.assertTrue(e['Done'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
840 self.assertEqual(e['Exports'][-1]['Seq'], seqPatient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
841
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
842
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
843 # Check the content of the logged information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
844 e = DoGet(_REMOTE, '/exports')['Exports']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
845
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
846 if 'PatientID' in e[0]:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
847 # Since Orthanc 0.8.6
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
848 patient = 'PatientID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
849 study = 'StudyInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
850 series = 'SeriesInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
851 instance = 'SOPInstanceUID'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
852 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
853 # Up to Orthanc 0.8.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
854 patient = 'PatientId'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
855 study = 'StudyInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
856 series = 'SeriesInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
857 instance = 'SopInstanceUid'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
858
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
859 for k in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
860 self.assertTrue('Date' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
861 self.assertTrue('Seq' in e[k])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
862 self.assertEqual('orthanctest', e[k]['RemoteModality'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
863
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
864 self.assertEqual(10, len(e[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
865 self.assertEqual('Instance', e[0]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
866 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
867 self.assertEqual('/instances/66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', e[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
868 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', e[0][instance])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
869 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[0][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
870 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[0][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
871 self.assertEqual('ozp00SjY2xG', e[0][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
872
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
873 self.assertEqual(9, len(e[1]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
874 self.assertEqual('Series', e[1]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
875 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
876 self.assertEqual('/series/f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', e[1]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
877 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.394', e[1][series])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
878 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[1][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
879 self.assertEqual('ozp00SjY2xG', e[1][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
880
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
881 self.assertEqual(8, len(e[2]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
882 self.assertEqual('Study', e[2]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
883 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
884 self.assertEqual('/studies/b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', e[2]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
885 self.assertEqual('1.2.840.113619.2.176.2025.1499492.7391.1171285944.390', e[2][study])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
886 self.assertEqual('ozp00SjY2xG', e[2][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
887
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
888 self.assertEqual(7, len(e[3]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
889 self.assertEqual('Patient', e[3]['ResourceType'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
890 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
891 self.assertEqual('/patients/6816cb19-844d5aee-85245eba-28e841e6-2414fae2', e[3]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
892 self.assertEqual('ozp00SjY2xG', e[3][patient])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
893
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
894 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
895 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
896
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
897
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
898 def test_store_peer(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
899 self.assertEqual(0, len(DoGet(_LOCAL, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
900 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
901
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
902 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
903 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
904 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
905
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
906 j = DoPost(_REMOTE, '/peers/peer/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
907 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
908 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
909
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
910 self.assertEqual(1, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
911
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
912 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
913 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
914
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
915
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
916 def test_bulk_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
917 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
918
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
919 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
920 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
921
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
922 j = DoPost(_REMOTE, '/modalities/orthanctest/store', [ a['ID'], b['ID'] ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
923 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
924
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
925 DropOrthanc(_LOCAL)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
926
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
927 # Send using patient's UUID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
928 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
929 j = DoPost(_REMOTE, '/modalities/orthanctest/store',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
930 [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ], 'application/json')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
931 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
932
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
933
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
934 def test_color(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
935 i = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
936 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
937 self.assertEqual("RGB", im.mode)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
938 self.assertEqual(41, im.size[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
939 self.assertEqual(41, im.size[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
940
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
941 # http://effbot.org/zone/pil-comparing-images.htm
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
942 truth = Image.open(GetDatabasePath('ColorTestMalaterre.png'))
11
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
943 self.assertTrue(ImageChops.difference(im, truth).getbbox() is None)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
944
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 10
diff changeset
945
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
946 def test_faking_ruby_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
947 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
948 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
949 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
950 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
951 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
952 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
953 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
954 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
955 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
956 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
957 DoGet(_REMOTE, '/patients/%s/protected' % a, data = { '_method' : 'PUT' }, body = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
958 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
959
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
960
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
961 def test_faking_ruby_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
962 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
963 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
964 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
965 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
966 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
967 DoGet(_REMOTE, '/patients/%s' % a, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
968 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
969 DoGet(_REMOTE, '/patients/%s' % b, data = { '_method' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
970 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
971
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
972
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
973 def test_faking_google_put(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
974 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
975 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
976 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
977 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
978 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
979 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
980 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
981 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
982 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '1')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
983 self.assertEqual(1, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
984 DoPost(_REMOTE, '/patients/%s/protected' % a, headers = { 'X-HTTP-Method-Override' : 'PUT' }, data = '0')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
985 self.assertEqual(0, DoGet(_REMOTE, '/patients/%s/protected' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
986
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
987
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
988 def test_faking_google_delete(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
989 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
990 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
991 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
992 a = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
993 b = DoGet(_REMOTE, '/patients')[1]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
994 DoPost(_REMOTE, '/patients/%s' % a, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
995 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
996 DoPost(_REMOTE, '/patients/%s' % b, headers = { 'X-HTTP-Method-Override' : 'DELETE' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
997 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
998
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
999
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1000 def test_lua(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1001 self.assertEqual(42, DoPost(_REMOTE, '/tools/execute-script', 'print(42)'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1002 self.assertTrue(IsDefinedInLua(_REMOTE, 'PrintRecursive'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1003 self.assertFalse(IsDefinedInLua(_REMOTE, 'HelloWorld'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1004
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1005
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1006 def test_metadata(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1007 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1008 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1009 i = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1010
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1011 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1012 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1013 self.assertEqual('LastUpdate', m[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1014
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1015 m = DoGet(_REMOTE, '/instances/%s/metadata' % i)
145
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1016 self.assertEqual(8, len(m))
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1017 self.assertTrue('IndexInSeries' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1018 self.assertTrue('ReceptionDate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1019 self.assertTrue('RemoteAET' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1020 self.assertTrue('Origin' in m)
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1021 self.assertTrue('TransferSyntax' in m)
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1022 self.assertTrue('SopClassUid' in m)
145
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1023 self.assertTrue('RemoteIP' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1024 self.assertTrue('HttpUsername' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1025 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i), 1)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1026 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i), 'RestApi')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1027 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i), '') # None, received by REST API
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1028 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i), '1.2.840.10008.1.2.4.91') # JPEG2k
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1029 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i), '1.2.840.10008.5.1.4.1.1.4')
12
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1030
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1031 # Play with custom metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1032 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'coucou')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1033 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1034 self.assertEqual(2, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1035 self.assertTrue('LastUpdate' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1036 self.assertTrue('5555' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1037 self.assertEqual('coucou', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1038 DoPut(_REMOTE, '/patients/%s/metadata/5555' % p, 'hello')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1039 self.assertEqual('hello', DoGet(_REMOTE, '/patients/%s/metadata/5555' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1040 DoDelete(_REMOTE, '/patients/%s/metadata/5555' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1041 m = DoGet(_REMOTE, '/patients/%s/metadata' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1042 self.assertEqual(1, len(m))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 11
diff changeset
1043 self.assertTrue('LastUpdate' in m)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1044
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1045
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1046 def test_statistics(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1047 # Upload 16 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1048 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1049 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1050 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1051 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1052 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1053
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1054 s = DoGet(_REMOTE, '/statistics')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1055 self.assertEqual(16, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1056 self.assertEqual(2, s['CountPatients'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1057 self.assertEqual(2, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1058 self.assertEqual(4, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1059 d = int(s['TotalUncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1060
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1061 e = 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1062 for patient in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1063 s = DoGet(_REMOTE, '/patients/%s/statistics' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1064 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1065 self.assertEqual(1, s['CountStudies'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1066 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1067 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1068
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1069 for study in DoGet(_REMOTE, '/studies'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1070 s = DoGet(_REMOTE, '/studies/%s/statistics' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1071 self.assertEqual(8, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1072 self.assertEqual(2, s['CountSeries'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1073 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1074
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1075 for series in DoGet(_REMOTE, '/series'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1076 s = DoGet(_REMOTE, '/series/%s/statistics' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1077 self.assertEqual(4, s['CountInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1078 e += int(s['UncompressedSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1079
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1080 self.assertEqual(3 * d, e)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1081
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1082
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1083 def test_custom_attachment(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1084 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1085 patient = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1086 instance = DoGet(_REMOTE, '/instances')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1087 size = int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1088 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1089
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1090 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1091 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1092 self.assertTrue('dicom' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1093 self.assertTrue('dicom-as-json' in DoGet(_REMOTE, '/instances/%s/attachments' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1094
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1095 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/22' % patient, 'hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1096 hello = 'hellohellohellohellohellohellohellohellohello'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1097 DoPut(_REMOTE, '/patients/%s/attachments/1025' % patient, hello)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1098 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1099 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1100 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1101 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1102
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1103 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1104 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1105 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1106 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1107 size +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1108 int(DoGet(_REMOTE, '/patients/%s/attachments/1025/compressed-size' % patient)) +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1109 int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1110
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1111 self.assertEqual(2, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1112 self.assertEqual(hello, DoGet(_REMOTE, '/patients/%s/attachments/1025/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1113 self.assertEqual('world', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1114 DoPost(_REMOTE, '/patients/%s/attachments/1025/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1115 DoPost(_REMOTE, '/patients/%s/attachments/1026/verify-md5' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1116 DoPut(_REMOTE, '/patients/%s/attachments/1026' % patient, 'world2')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1117 self.assertEqual('world2', DoGet(_REMOTE, '/patients/%s/attachments/1026/data' % patient))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1118
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1119 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1120 DoDelete(_REMOTE, '/patients/%s/attachments/1025' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1121 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1122 int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1123 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1124 size + int(DoGet(_REMOTE, '/patients/%s/attachments/1026/compressed-size' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1125
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1126 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1127 DoDelete(_REMOTE, '/patients/%s/attachments/1026' % patient)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1128 self.assertEqual(0, len(DoGet(_REMOTE, '/patients/%s/attachments' % patient)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1129
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1130 self.assertEqual(int(DoGet(_REMOTE, '/patients/%s/statistics' % patient)['DiskSize']), size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1131 self.assertEqual(size, int(DoGet(_REMOTE, '/statistics')['TotalDiskSize']))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1132
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1133
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1134 def test_incoming_storescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1135 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
1136 subprocess.check_call([ FindExecutable('storescu'),
44
ffa542cce638 Toolbox.FindExecutable()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 43
diff changeset
1137 _REMOTE['Server'], str(_REMOTE['DicomPort']),
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1138 GetDatabasePath('ColorTestImageJ.dcm') ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1139 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1140
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1141 i = DoGet(_REMOTE, '/instances')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1142 self.assertEqual(1, len(i))
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1143 m = DoGet(_REMOTE, '/instances/%s/metadata' % i[0])
145
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1144 self.assertEqual(8, len(m))
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1145 self.assertTrue('IndexInSeries' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1146 self.assertTrue('ReceptionDate' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1147 self.assertTrue('RemoteAET' in m)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1148 self.assertTrue('Origin' in m)
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1149 self.assertTrue('TransferSyntax' in m)
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1150 self.assertTrue('SopClassUid' in m)
145
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1151 self.assertTrue('RemoteIP' in m)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 144
diff changeset
1152 self.assertTrue('CalledAET' in m)
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1153 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/IndexInSeries' % i[0]), 1)
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1154 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i[0]), 'DicomProtocol')
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1155 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i[0]), 'STORESCU')
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
1156 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i[0]), '1.2.840.10008.1.2.1')
95
a807a4699eb4 testing of metadata SopClassUid
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 92
diff changeset
1157 self.assertEqual(DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % i[0]), '1.2.840.10008.5.1.4.1.1.7')
63
2652d562267a test Origin metadata of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 62
diff changeset
1158
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1159
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1160 def test_incoming_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1161 UploadInstance(_REMOTE, 'Multiframe.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1162 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1163
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1164 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', '0010,0010' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1165 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1166 self.assertEqual(2, len(patientNames))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1167 self.assertTrue('Test Patient BG ' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1168 self.assertTrue('Anonymized' in patientNames)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1169
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1170 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1171 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1172 self.assertEqual(2, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1173 self.assertTrue('20070208' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1174 self.assertTrue('19980312' in series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1175
56
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1176 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,0021', '-k', 'ModalitiesInStudy=MR\\XA' ])
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1177 series = re.findall('\(0008,0021\).*?\[\s*(.*?)\s*\]', i)
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1178 self.assertEqual(1, len(series))
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1179 self.assertTrue('19980312' in series)
1059b8de42de ModalitiesInStudy subtest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 55
diff changeset
1180
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1181 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=Anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1182 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1183 self.assertEqual(1, len(series))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1184
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1185 # Test the "CaseSentitivePN" flag (false by default)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1186 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'PatientName=anonymized' ])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1187 series = re.findall('\(0010,0010\).*?\[\s*(.*?)\s*\]', i)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1188 self.assertEqual(1, len(series))
66
821d9eb73c45 Test returning sequence values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
1189
70
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1190 # Test range search (buggy if Orthanc <= 0.9.6)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1191 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1192 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1193 self.assertEqual(2, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1194 self.assertTrue('20070208' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1195 self.assertTrue('19980312' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1196 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=19980312-19980312' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1197 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1198 self.assertEqual(1, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1199 self.assertTrue('19980312' in studies)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1200 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'StudyDate=-19980312' ])
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1201 studies = re.findall('\(0008,0020\).*?\[\s*(.*?)\s*\]', i)
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1202 self.assertEqual(1, len(studies))
9e7b5809481f test range search
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 69
diff changeset
1203 self.assertTrue('19980312' in studies)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1204
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1205
191
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1206 def test_incoming_findscu_2(self):
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1207 # This test fails if "LookupMode_DatabaseOnly" is used
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1208 # (sequences are not available in this mode, and only main
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1209 # DICOM tags are returned)
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1210 UploadInstance(_REMOTE, 'Multiframe.dcm')
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1211 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1212
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1213 # Test returning sequence values (only since Orthanc 0.9.5)
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1214 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0008,2112' ]) # "ColorTestImageJ" has this sequence tag
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1215 sequences = re.findall('\(0008,2112\)', i)
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1216 self.assertEqual(1, len(sequences))
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1217
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1218 # Test returning a non-main DICOM tag,
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1219 # "SecondaryCaptureDeviceID" (0018,1010), whose value is
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1220 # "MEDPC" in "ColorTestImageJ.dcm"
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1221 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010' ])
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1222 tags = re.findall('\(0018,1010\).*MEDPC', i)
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1223 self.assertEqual(1, len(tags))
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1224
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1225
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1226 def test_incoming_findscu_3(self):
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1227 # This test fails if "LookupMode_DatabaseOnly" or
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1228 # "LookupMode_DiskOnAnswer" is used, as
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1229 # "SecondaryCaptureDeviceID" (0018,1010) is not a main DICOM
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1230 # tag, as thus a constraint cannot be applied to it
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1231 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1232
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1233 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', '0018,1010=MEDPC' ])
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1234 sequences = re.findall('\(0018,1010\)', i)
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1235 self.assertEqual(1, len(sequences))
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1236
bc8bc83465dc testing C-FIND optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1237
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1238 def test_incoming_movescu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1239 UploadInstance(_REMOTE, 'Multiframe.dcm')
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1240
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1241 # No matching patient, so no job is created
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1242 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1243 CallMoveScu([ '--patient', '-k', '0008,0052=PATIENT', '-k', 'PatientID=none' ])
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1244 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1245
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
1246 # 1 Matching patient, track the job
138
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1247 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1248 '--patient',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1249 '-k', '0008,0052=PATIENT',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1250 '-k', 'PatientID=12345678'
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
1251 ])))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1252 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1253
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1254
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1255 def test_findscu(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1256 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1257 j = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1258 k = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1259 DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1260
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1261 # Test the "find-patient" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1262 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1263 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1264 self.assertEqual('ozp00SjY2xG', p[0]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1265
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1266 # Test wildcards constraints. The "LO" value representation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1267 # for PatientID is always case-sensitive, but the "PN" for
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1268 # PatientName might depend on the implementation:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1269 # "GenerateConfigurationForTests.py" will force it to be case
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1270 # insensitive (which was the default until Orthanc 0.8.6).
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1271 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'K*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1272 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1273
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1274 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'k*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1275 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1276
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1277 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'ozp*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1278 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1279
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1280 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : 'o?p*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1281 self.assertEqual(1, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1282
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1283 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientID' : '0?q*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1284 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1285
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1286 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'B*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1287 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1288
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1289 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'b*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1290 self.assertEqual(0, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1291
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1292 DoPost(_REMOTE, '/modalities/orthanctest/store', str(j), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1293 DoPost(_REMOTE, '/modalities/orthanctest/store', str(k), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1294 DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1295 self.assertEqual(3, len(DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { })))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1296
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1297 p = DoPost(_REMOTE, '/modalities/orthanctest/find-patient', { 'PatientName' : 'A*' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1298 self.assertEqual(2, len(p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1300 # Test the "find-study" level. This is the instance "ColorTestImageJ.dcm"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1301 s = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1302 self.assertEqual(1, len(s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1303 self.assertEqual('20070208', s[0]['StudyDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1304
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1305 # Test range searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1306 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1307 'StudyDate' : '-20070101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1308 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1309
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1310 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1311 'StudyDate' : '20090101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1312 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1313
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1314 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1315 'StudyDate' : '20070101-' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1316 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1317
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1318 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1319 'StudyDate' : '-20090101' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1320 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1322 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1323 'StudyDate' : '20070207-20070207' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1324 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1325
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1326 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1327 'StudyDate' : '20070208-20070208' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1328 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1329
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1330 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', { 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1331 'StudyDate' : '20070209-20070209' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1332 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1333
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1334 # Test the ModalitiesInStudy tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1335 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1336 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1337 'ModalitiesInStudy' : 'US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1338 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1339
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1340 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1341 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1342 'ModalitiesInStudy' : 'CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1343 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1344
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1345 t = DoPost(_REMOTE, '/modalities/orthanctest/find-study', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1346 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1347 'ModalitiesInStudy' : 'US\\CT' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1348 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1349
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1350 # Test the "find-series" level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1351 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1352 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1353 'StudyInstanceUID' : s[0]['StudyInstanceUID'] })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1354 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1355
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1356 # Test "\" separator
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1357 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1358 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1359 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1360 'Modality' : 'MR\\CT\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1361 self.assertEqual(1, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1362
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1363 t = DoPost(_REMOTE, '/modalities/orthanctest/find-series', {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1364 'PatientID' : 'B9uTHKOZ',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1365 'StudyInstanceUID' : s[0]['StudyInstanceUID'],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1366 'Modality' : 'MR\\US' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1367 self.assertEqual(0, len(t))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1368
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1369
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1370 def test_update_modalities(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1371 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1372 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1373 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1374 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1375 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1376 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1377 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1378 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1379 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1380 DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000 ])
116
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1381 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'MedInria' ]) # check backward compatiblity with obsolete manufacturer
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1382 DoDelete(_REMOTE, '/modalities/tata')
124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 123
diff changeset
1383 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoUniversalWildcard' ])
121
1a19f953f53c also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 120
diff changeset
1384 DoDelete(_REMOTE, '/modalities/tata')
1a19f953f53c also test GenericNoWildcardInDates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 120
diff changeset
1385 DoPut(_REMOTE, '/modalities/tata', [ "STORESCP", "localhost", 2000, 'GenericNoWildcardInDates' ])
128
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1386 modalitiesReadback = DoGet(_REMOTE, '/modalities?expand')
182
7a6b532853ab modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 181
diff changeset
1387 self.assertEqual('STORESCP', modalitiesReadback['tata']['AET'])
7a6b532853ab modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 181
diff changeset
1388 self.assertEqual('localhost', modalitiesReadback['tata']['Host'])
7a6b532853ab modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 181
diff changeset
1389 self.assertEqual(2000, modalitiesReadback['tata']['Port'])
7a6b532853ab modalities are now described as JSON objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 181
diff changeset
1390 self.assertEqual('GenericNoWildcardInDates', modalitiesReadback['tata']['Manufacturer'])
116
4a196ebc7a4f updated tests for issue #31
amazy
parents: 112
diff changeset
1391 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/modalities/toto', [ "STORESCP", "localhost", 2000, 'InvalidManufacturerName' ]))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1392 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1393 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1394 DoDelete(_REMOTE, '/modalities/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1395 DoDelete(_REMOTE, '/modalities/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1396 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1397 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/modalities/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1398
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1399
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1400 def test_update_peers(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1401 # curl -X PUT http://localhost:8042/peers/toto -d '["http://localhost:8042/"]' -v
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1402 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1403 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1404 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1405 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1406 try:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1407 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1408 except:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1409 pass
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1410 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1411 DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/' ])
214
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1412 DoPut(_REMOTE, '/peers/tata', { 'Url': 'http://localhost:8042/',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1413 'Username': 'user',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1414 'Password' : 'pass',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1415 'RemoteSelf' : 'self' })
128
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1416 self.assertTrue('tata' in DoGet(_REMOTE, '/peers'))
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1417 peersReadback = DoGet(_REMOTE, '/peers?expand')
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1418 self.assertEqual('http://localhost:8042/', peersReadback['tata']['Url'])
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1419 self.assertEqual('user', peersReadback['tata']['Username'])
214
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1420
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1421 if IsOrthancVersionAbove(_REMOTE, 1, 5, 4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1422 self.assertEqual(None, peersReadback['tata']['Password']) # make sure no sensitive data is included
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1423 self.assertFalse(peersReadback['tata']['Pkcs11']) # make sure no sensitive data is included
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1424 self.assertEqual('self', peersReadback['tata']['RemoteSelf'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1425 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1426 self.assertFalse('Password' in peersReadback['tata']) # make sure no sensitive data is included
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1427 self.assertFalse('Pkcs11' in peersReadback['tata']) # make sure no sensitive data is included
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1428 self.assertFalse('RemoteSelf' in peersReadback['tata'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1429
128
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1430 self.assertFalse('CertificateFile' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1431 self.assertFalse('CertificateKeyFile' in peersReadback['tata']) # make sure no sensitive data is included
a9fdfcb696e6 added tests for ?expand in /peers and /modalities
amazy
parents: 127
diff changeset
1432 self.assertFalse('CertificateKeyPassword' in peersReadback['tata']) # make sure no sensitive data is included
214
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1433
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1434 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1435 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/peers/toto', [ 'http://localhost:8042/', 'a', 'b', 'c' ]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1436 self.assertTrue('store' in DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1437 self.assertTrue('store' in DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1438 DoDelete(_REMOTE, '/peers/toto')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1439 DoDelete(_REMOTE, '/peers/tata')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1440 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/toto'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1441 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/peers/tata'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1442
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1443
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1444 def test_mesterhazy_modification(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1445 # When I modify a series ( eg. curl
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1446 # http://localhost:8042/series/uidhere/modify -X POST -d
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1447 # '{"Replace":{"SeriesDate":"19990101"}}' ) the modified
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1448 # series is added to a new Study, instead of the existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1449 # Study. Fixed in Orthanc 0.7.5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1450
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1451 u = UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1452 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1453 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1454
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1455 modified = DoPost(_REMOTE, '/series/%s/modify' % series,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1456 json.dumps({ "Replace" : { "SeriesDate" : "19990101" }}))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1457
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1458 self.assertEqual(study, DoGet(_REMOTE, '/series/%s' % modified['ID']) ['ParentStudy'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1459
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1460
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1461 def test_create(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1462 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1463 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1464 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1465 'Modality' : 'CT',
58
b5518378e23b fix test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
1466 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1',
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1467 'PixelData' : 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==' # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1468 }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1469
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1470 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1471 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1472
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1473 png = GetImage(_REMOTE, '/instances/%s/preview' % i['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1474 self.assertEqual((5, 5), png.size)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1475
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1476 j = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1477 self.assertEqual('Instance', j['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1478 self.assertEqual(j['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
1479
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1480
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1481 def test_pilates(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1482 # "SCU failed error when accessing orthanc with osirix" by
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1483 # Pilates Agentur (Mar 10, 2014 at 9:33 PM)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1484 i = UploadInstance(_REMOTE, 'PilatesArgenturGEUltrasoundOsiriX.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1485 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1486 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1487 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1488
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1489
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1490 def test_shared_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1491 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1492 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1493 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1494
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1495 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1496 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1497 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p))
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1498
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1499 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags' % p)['0010,0010']['Value'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1500 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p)['PatientName'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1501 self.assertEqual('KNEE', DoGet(_REMOTE, '/patients/%s/shared-tags?short' % p)['0010,0010'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
1502
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1503 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1504 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1505 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1506 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1507 self.assertFalse('0008,0018' in DoGet(_REMOTE, '/patients/%s/shared-tags' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1508 self.assertFalse('SOPInstanceUID' in DoGet(_REMOTE, '/patients/%s/shared-tags?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1509
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1510 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/tags' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1511 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/tags?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1512
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1514 def test_modules(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1515 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1516 p = DoGet(_REMOTE, '/patients')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1517 s = DoGet(_REMOTE, '/studies')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1518 t = DoGet(_REMOTE, '/series')[0]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1519
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1520 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/patients/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1521 self.assertTrue('PatientName' in DoGet(_REMOTE, '/patients/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1522 self.assertTrue('0010,0010' in DoGet(_REMOTE, '/studies/%s/module-patient' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1523 self.assertTrue('PatientName' in DoGet(_REMOTE, '/studies/%s/module-patient?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1524 self.assertTrue('0008,1030' in DoGet(_REMOTE, '/studies/%s/module' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1525 self.assertTrue('StudyDescription' in DoGet(_REMOTE, '/studies/%s/module?simplify' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1526 self.assertTrue('0008,103e' in DoGet(_REMOTE, '/series/%s/module' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1527 self.assertTrue('SeriesDescription' in DoGet(_REMOTE, '/series/%s/module?simplify' % p))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1528 self.assertTrue('0008,0018' in DoGet(_REMOTE, '/instances/%s/module' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1529 self.assertTrue('SOPInstanceUID' in DoGet(_REMOTE, '/instances/%s/module?simplify' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1530
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1531
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1532 def test_auto_directory(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1533 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1534 self.assertTrue('now' in DoGet(_REMOTE, '/tools'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1535 self.assertTrue('dicom-conformance' in DoGet(_REMOTE, '/tools'))
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
1536 self.assertTrue('invalidate-tags' in DoGet(_REMOTE, '/tools'))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1537 self.assertTrue(len(DoGet(_REMOTE, '/tools/dicom-conformance')) > 1000)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1538 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1539 self.assertTrue('echo' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1540 self.assertTrue('find' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1541 self.assertTrue('find-instance' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1542 self.assertTrue('find-patient' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1543 self.assertTrue('find-series' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1544 self.assertTrue('find-study' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1545 self.assertTrue('store' in DoGet(_REMOTE, '/modalities/orthanctest'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1546 self.assertTrue('store' in DoGet(_REMOTE, '/peers/peer'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1547 self.assertTrue('matlab' in DoGet(_REMOTE, '/instances/%s/frames/0' % a))
79
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
1548 self.assertTrue('raw' in DoGet(_REMOTE, '/instances/%s/frames/0' % a))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1549 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/tools/nope'))
28
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1550 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1551 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/nope/nope.html'))
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1552 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope')[0].status)
156c7ae164b5 new test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 27
diff changeset
1553 self.assertEqual(404, DoGetRaw(_REMOTE, '/nope/nope.html')[0].status)
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1554
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1555
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1556 def test_echo(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1557 DoPost(_REMOTE, '/modalities/orthanctest/echo')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1558
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1559
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1560 def test_xml(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1561 json = DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/json' })
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1562 xml = minidom.parseString(DoGet(_REMOTE, '/tools', headers = { 'accept' : 'application/xml' }))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1563 items = xml.getElementsByTagName('root')[0].getElementsByTagName('item')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1564 self.assertEqual(len(items), len(json))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1565
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1566 self.assertTrue('dicom-conformance' in json)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1568 ok = False
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1569 for i in items:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1570 if i.childNodes[0].data == 'dicom-conformance':
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1571 ok = True
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1572 self.assertTrue(ok)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1573
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1574
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1575 def test_googlecode_issue_16(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1576 i = UploadInstance(_REMOTE, 'Issue16.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1577 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)['FrameIncrementPointer']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1578 self.assertEqual('0018,1063', t)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1579
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1580
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1581 def test_googlecode_issue_22(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1582 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1583 a = [
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1584 "f804691f62197040438f4627c6b994f1", # Frame 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1585 "c69eee9a51eea3e8611e82e578897254",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1586 "315666be83e2d0111c77bc0996d84901",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1587 "3e27aa959d911172c48a1436443c72b1",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1588 "958642c9e7e9d232d3869faff546058c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1589 "5e7ea8e3e4230cae707d143481355c59",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1590 "eda37f83558d858a596175aed8b2ad47",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1591 "486713bd2895c4ecbe0e97715ac7f80a",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1592 "091ef729eb169e67da8a0faa9631f9a8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1593 "5aa2b8c7ffe0a483efaa8e12417686ca",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1594 "e2f39e85896fe58876654b94cd0b5013",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1595 "6fd2129e4950abbe1be053bc814d5da8",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1596 "c3331a8ba7a757f3d423735ab7fa81f9",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1597 "746f808582156734dd6b6fdfd3a0b72c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1598 "8075ea2b227a70c60ea6b7b75a6bb190",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1599 "806b8b3e300c615099c11a5ec23465aa",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1600 "7c836aa298ba6eef96434579af631a11",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1601 "a0357dc9f4f72d73a885c33d7c287446",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1602 "f25ba3be1cc7d7fad95706adc199ea7d",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1603 "8b114c526b8cbed6cad8a3248b7b480c",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1604 "44e6670f127e612a2b4aa60a0d207698",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1605 "b8945f90fe02facf2ace24ca1ecbe0a5",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1606 "95c796c2fa8f59018b15cf2987b1f79b",
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1607 "ce0a51ab30224205b44920221dc27351", # Frame 23
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1608 ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1609
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1610 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1611 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/preview' % s))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1612
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1613 for i in range(len(a)):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1614 self.assertEqual(a[i], ComputeMD5(DoGet(_REMOTE, '/instances/%s/frames/%d/preview' % (s, i))))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1615
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1616
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1617 def test_googlecode_issue_19(self):
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1618 # This is an image with "YBR_FULL" photometric interpretation, it is not supported by Orthanc
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1619 # gdcmconv -i /home/jodogne/DICOM/GdcmDatabase/US_DataSet/HDI5000_US/3EAF5E01 -w -o Issue19.dcm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1620
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1621 a = UploadInstance(_REMOTE, 'Issue19.dcm')['ID']
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
1622 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/941ad3c8-05d05b88-560459f9-0eae0e20-6cddd533/preview'))
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1623
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1624
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
1625 def test_googlecode_issue_37(self):
13
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1626 # Same test for issues 35 and 37. Fixed in Orthanc 0.9.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1627 u = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1628
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1629 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1630 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1631 'Query' : { 'StationName' : 'SMR4-MP3' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 12
diff changeset
1632 self.assertEqual(1, len(a))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1633
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1634
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1635 def test_rest_find(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1636 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1637 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1638 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1639 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1640 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1641 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1642
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1643 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1644 'CaseSensitive' : False,
194
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1645 'Query' : { 'PatientName' : 'BRAINIX' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1646 self.assertEqual(1, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1647
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1648 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1649 'CaseSensitive' : False,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1650 'Query' : { 'PatientName' : 'BRAINIX\\KNEE\\NOPE' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1651 self.assertEqual(2, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1652
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1653 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1654 'CaseSensitive' : False,
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1655 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1656 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1657
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1658 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1659 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1660 'Query' : { 'PatientName' : '*n*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1661 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1662
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1663 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1664 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1665 'CaseSensitive' : False,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1666 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1667 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1668 self.assertEqual('20080822', a[0]['MainDicomTags']['PatientBirthDate'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1669
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1670 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1671 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1672 'Query' : { 'PatientName' : '*ne*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1673 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1674
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1675 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1676 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1677 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1678 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1679
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1680 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1681 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1682 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1683 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1684
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1685 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1686 'CaseSensitive' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1687 'Query' : { 'PatientName' : '*NE*' }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1688 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1689
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1690 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1691 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1692
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1693 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1694 self.assertEqual(2, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1695
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1696 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1697 self.assertEqual(4, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1698
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1699 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance', 'Query' : { }})
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1700 self.assertEqual(8, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1701
194
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1702 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1703 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1704 'Query' : { 'StudyDate' : '20061201-20061201' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1705 self.assertEqual(1, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1706 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1707
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1708 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1709 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1710 'Query' : { 'StudyDate' : '20061201-20091201' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1711 self.assertEqual(2, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1712 for i in range(2):
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1713 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1714
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1715 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1716 'Query' : { 'StudyDate' : '20061202-20061202' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1717 self.assertEqual(0, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1718
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1719 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1720 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1721 'Query' : { 'StudyDate' : '-20061201' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1722 self.assertEqual(1, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1723 self.assertEqual('BRAINIX', a[0]['PatientMainDicomTags']['PatientName'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1724
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1725 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1726 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1727 'Query' : { 'StudyDate' : '-20051201' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1728 self.assertEqual(0, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1729
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1730 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1731 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1732 'Query' : { 'StudyDate' : '20061201-' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1733 self.assertEqual(2, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1734 for i in range(2):
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1735 self.assertTrue(a[i]['PatientMainDicomTags']['PatientName'] in ['BRAINIX', 'KNEE'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1736
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1737 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1738 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1739 'Query' : { 'StudyDate' : '20061202-' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1740 self.assertEqual(1, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1741 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1742
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1743 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1744 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1745 'Query' : { 'StudyDate' : '20080819-' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1746 self.assertEqual(1, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1747 self.assertEqual('KNEE', a[0]['PatientMainDicomTags']['PatientName'])
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1748
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1749 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1750 'Expand' : True,
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1751 'Query' : { 'StudyDate' : '20080820-' }})
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1752 self.assertEqual(0, len(a))
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1753
9f7ae64c0fda more tests about find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1754
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1755
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1756 def test_rest_query_retrieve(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1757 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1758
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1759 # Upload 8 instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1760 for i in range(2):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1761 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1762 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1763 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1764 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1765
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1766 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1767 for p in DoGet(_REMOTE, '/patients'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1768 DoPost(_REMOTE, '/modalities/orthanctest/store', p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1769 DoDelete(_REMOTE, '/patients/%s' % p)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1770
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1771 for q in DoGet(_REMOTE, '/queries'):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1772 DoDelete(_REMOTE, '/queries/%s' % q)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1773
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1774 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1775 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1776 a = DoPost(_REMOTE, '/modalities/orthanctest/query', { 'Level' : 'Series',
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1777 'Query' : {
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1778 'PatientName' : '*NE*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1779 'StudyDate' : '*',
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1780 }})['ID']
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1781 self.assertEqual(1, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1782
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1783 b = DoGet(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1784 self.assertTrue('answers' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1785 self.assertTrue('level' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1786 self.assertTrue('modality' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1787 self.assertTrue('query' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1788 self.assertTrue('retrieve' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1789 self.assertEqual('Series', DoGet(_REMOTE, '/queries/%s/level' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1790 self.assertEqual('orthanctest', DoGet(_REMOTE, '/queries/%s/modality' % a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1791
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1792 q = DoGet(_REMOTE, '/queries/%s/query?simplify' % a)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1793 self.assertEqual(2, len(q))
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1794 self.assertTrue('PatientName' in q)
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1795 self.assertTrue('StudyDate' in q)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1796 self.assertEqual('*NE*', q['PatientName'])
27
cde1691838d3 wildcard test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 26
diff changeset
1797 self.assertEqual('*', q['StudyDate'])
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1798
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1799 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1800
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1801 s = DoGet(_REMOTE, '/queries/%s/answers/0' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1802 self.assertTrue('content' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1803 self.assertTrue('retrieve' in s)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1804
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1805 s = DoGet(_REMOTE, '/queries/%s/answers/0/content?simplify' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1806 self.assertEqual('887', s['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1807 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s['StudyInstanceUID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1808
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1809 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1810 DoPost(_REMOTE, '/queries/%s/answers/0/retrieve' % a, 'ORTHANC')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1811 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1812 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1813 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1814 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1815
112
9d09f6f21b60 added a test for issue #36
amazy
parents: 111
diff changeset
1816 DoPost(_REMOTE, '/queries/%s/answers/1/retrieve' % a, 'ORTHANC', 'application/json') # make sure the issue #36 is fixed (query/retrieve Rest API: /retrieve route shall accept application/json content type)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1817 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1818 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1819 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1820 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1821
186
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1822 # New in Orthanc 1.4.3
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1823 s = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % a)
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1824 self.assertEqual(2, len(s))
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1825 for i in range(2):
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1826 self.assertEqual('SERIES', s[i]['QueryRetrieveLevel'])
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1827 self.assertEqual('887', s[i]['PatientID'])
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1828 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', s[i]['StudyInstanceUID'])
8feebc2bf9fc test options expand and limit to /queries/.../answers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 183
diff changeset
1829
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1830 DoDelete(_REMOTE, '/queries/%s' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1831 self.assertEqual(0, len(DoGet(_REMOTE, '/queries')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1832
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1833
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1834 def test_parent(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1835 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1836 patient = '6816cb19-844d5aee-85245eba-28e841e6-2414fae2'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1837 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1838 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1839 instance = '66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d'
107
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
1840 self.assertEqual(instance, u)
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1841
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1842 a = DoGet(_REMOTE, '/studies/%s/patient' % study)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1843 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1844 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1845
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1846 a = DoGet(_REMOTE, '/series/%s/patient' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1847 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1848 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1849
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1850 a = DoGet(_REMOTE, '/series/%s/study' % series)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1851 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1852 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1853
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1854 a = DoGet(_REMOTE, '/instances/%s/patient' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1855 self.assertEqual('Patient', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1856 self.assertEqual(patient, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1857
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1858 a = DoGet(_REMOTE, '/instances/%s/study' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1859 self.assertEqual('Study', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1860 self.assertEqual(study, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1861
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1862 a = DoGet(_REMOTE, '/instances/%s/series' % instance)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1863 self.assertEqual('Series', a['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1864 self.assertEqual(series, a['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1865
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1866
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1867 def test_shanon(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1868 def Anonymize(instance, replacements = {}):
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1869 return DoPost(_REMOTE, '/instances/%s/anonymize' % instance, {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1870 'Replace' : replacements,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1871 'Force' : True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1872 }, 'application/json')
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1873
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1874 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1875 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1876 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1877
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1878 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1879 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1880 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1881 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1882 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1883
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1884 a = ExtractDicomTags(Anonymize(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1885 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1886 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1887 self.assertTrue(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1888
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1889 a = ExtractDicomTags(Anonymize(u, { 'PatientName' : 'toto' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1890 for i in range(4):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1891 self.assertNotEqual(ids[i], a[i])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1892 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1893
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1894 a = ExtractDicomTags(Anonymize(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1895 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1896 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1897
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1898 a = ExtractDicomTags(Anonymize(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1899 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1900 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1901
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1902 a = ExtractDicomTags(Anonymize(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1903 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1904 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1905
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1906 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1907 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1908 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1909
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1910 a = ExtractDicomTags(Anonymize(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1911 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1912 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1913 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1914 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1915 self.assertFalse(a[4].startswith('Orthanc'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1916
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1917 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1918
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1919
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1920 def test_shanon_2(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1921 def Modify(instance, replacements = {}):
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1922 return DoPost(_REMOTE, '/instances/%s/modify' % instance, {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1923 'Replace' : replacements,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1924 'Force': True,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
1925 }, 'application/json')
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1926
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1927 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1928 u = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1929 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1930
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1931 tags = [ 'PatientID', 'StudyInstanceUID', 'SeriesInstanceUID', 'SOPInstanceUID', 'DeidentificationMethod' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1932 ids = [ 'ozp00SjY2xG',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1933 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1934 '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1935 '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109' ]
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1936
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1937 a = ExtractDicomTags(Modify(u), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1938 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1939 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1940 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1941 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1942 self.assertEqual(0, len(a[4]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1943
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1944 a = ExtractDicomTags(Modify(u, { 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1945 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1946 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1947 self.assertEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1948 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1949
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1950 a = ExtractDicomTags(Modify(u, { 'SeriesInstanceUID' : 'series' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1951 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1952 self.assertEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1953 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1954 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1956 a = ExtractDicomTags(Modify(u, { 'StudyInstanceUID' : 'study' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1957 self.assertEqual(ids[0], a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1958 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1959 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1960 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1961
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1962 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1963 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1964 self.assertNotEqual(ids[1], a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1965 self.assertNotEqual(ids[2], a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1966 self.assertNotEqual(ids[3], a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1967
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1968 a = ExtractDicomTags(Modify(u, { 'PatientID' : 'patient',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1969 'StudyInstanceUID' : 'study',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1970 'SeriesInstanceUID' : 'series',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1971 'SOPInstanceUID' : 'instance' }), tags)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1972 self.assertEqual('patient', a[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1973 self.assertEqual('study', a[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1974 self.assertEqual('series', a[2])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1975 self.assertEqual('instance', a[3])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1976
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1977 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1978
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1979
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1980 def test_instances_tags(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1981 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1982 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1983 #a = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386937.676343')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1984 #b = UploadInstance(_REMOTE, 'Cardiac/MR.X.1.2.276.0.7230010.3.1.4.2831157719.2256.1336386925.676329')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1985
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1986 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/patients')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1987 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1988 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1989 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1990
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1991 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/studies')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1992 self.assertEqual(2, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1993 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1994 self.assertEqual('887', i[i.keys()[1]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1995
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1996 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1997 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1998 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
1999 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2000
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2001 i = DoGet(_REMOTE, '/patients/%s/instances-tags?simplify' % DoGet(_REMOTE, '/series')[1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2002 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2003 self.assertEqual('887', i[i.keys()[0]]['PatientID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2004
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2005 i = DoGet(_REMOTE, '/patients/%s/instances-tags?short' % DoGet(_REMOTE, '/series')[1])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2006 self.assertEqual(1, len(i))
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2007 self.assertEqual('887', i[i.keys()[0]]['0010,0020'])
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2008
14
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2009
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2010 def test_lookup(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2011 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2012 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2013
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2014 UploadInstance(_REMOTE, 'DummyCT.dcm')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2016 a = DoPost(_REMOTE, '/tools/lookup', 'ozp00SjY2xG')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2017 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2018 self.assertEqual('Patient', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2019 self.assertEqual('6816cb19-844d5aee-85245eba-28e841e6-2414fae2', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2020 self.assertEqual('/patients/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2022 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.390')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2023 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2024 self.assertEqual('Study', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2025 self.assertEqual('b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2026 self.assertEqual('/studies/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2027
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2028 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7391.1171285944.394')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2029 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2030 self.assertEqual('Series', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2031 self.assertEqual('f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2032 self.assertEqual('/series/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2033
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2034 a = DoPost(_REMOTE, '/tools/lookup', '1.2.840.113619.2.176.2025.1499492.7040.1171286242.109')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2035 self.assertEqual(1, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2036 self.assertEqual('Instance', a[0]['Type'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2037 self.assertEqual('66a662ce-7430e543-bad44d47-0dc5a943-ec7a538d', a[0]['ID'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2038 self.assertEqual('/instances/%s' % a[0]['ID'], a[0]['Path'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2039
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2040 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2041 a = DoPost(_REMOTE, '/tools/lookup', '3113719P')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2042 self.assertEqual(0, len(a))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 13
diff changeset
2043
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2044
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2045 def test_autorouting(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2046 knee1 = 'Knee/T1/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2047 knee2 = 'Knee/T2/IM-0001-0002.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2048 other = 'Brainix/Flair/IM-0001-0001.dcm'
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2049
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2050 # Check that this version is >= 0.8.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2051 self.assertTrue(IsDefinedInLua(_REMOTE, '_InitializeJob'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2052 self.assertTrue('orthanctest' in DoGet(_REMOTE, '/modalities'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2053
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2054 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2055 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2056
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2057 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2058 DropOrthanc(_LOCAL)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2059 InstallLuaScriptFromPath(_REMOTE, 'Lua/Autorouting.lua')
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2060 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2061 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2062 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2063 WaitEmpty(_REMOTE)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2064 UninstallLuaCallbacks(_REMOTE)
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2065 self.assertEqual(3, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2066
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2067 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2068 DropOrthanc(_LOCAL)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2069 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingConditional.lua')
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2070 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2071 UploadInstance(_REMOTE, knee2)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2072 UploadInstance(_REMOTE, other)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2073 WaitEmpty(_REMOTE)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2074 UninstallLuaCallbacks(_REMOTE)
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2075 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2076
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2077 DropOrthanc(_REMOTE)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2078 DropOrthanc(_LOCAL)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2079 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingModification.lua')
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2080 UploadInstance(_REMOTE, knee1)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2081 WaitEmpty(_REMOTE)
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2082 UninstallLuaCallbacks(_REMOTE)
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2083 i = DoGet(_LOCAL, '/instances')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2084 self.assertEqual(1, len(i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2085
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2086 with tempfile.NamedTemporaryFile(delete = True) as f:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2087 f.write(DoGet(_LOCAL, '/instances/%s/file' % i[0]))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2088 f.flush()
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 44
diff changeset
2089 routed = subprocess.check_output([ FindExecutable('dcm2xml'), f.name ])
15
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2090 self.assertEqual('My Medical Device', re.search('"StationName">(.*?)<', routed).group(1).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2091 self.assertEqual(None, re.search('"MilitaryRank"', routed))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
2092 self.assertEqual(None, re.search('"0051,0010"', routed)) # A private tag
17
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2093
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2094
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2095 def test_storescu_rf(self):
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2096 i = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2097 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2098 j = DoPost(_REMOTE, '/modalities/orthanctest/store', str(i), 'text/plain')
7c8500991a12 karsten
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 15
diff changeset
2099 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2100
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2101
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2102 def test_anonymize_instance(self):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2103 def AnonymizeAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2104 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/anonymize' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2105 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2106
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2107 def ModifyAndUpload(instanceId, parameters):
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2108 return DoPost(_REMOTE, '/instances', DoPost(_REMOTE, '/instances/%s/modify' % instanceId, parameters,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2109 'application/json'), 'application/dicom')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2110
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2111 a = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2112 s1 = DoGet(_REMOTE, '/instances/%s/content/PatientName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2113 s2 = DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % a) # Some private tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2114 s3 = DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2115 s4 = DoGet(_REMOTE, '/instances/%s/content/SeriesDescription' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2116 s5 = DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2117
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2118 b = AnonymizeAndUpload(a, '{}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2119 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2120 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2121
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2122 # Keep private tag (only OK since Orthanc 0.8.0)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2123 b = AnonymizeAndUpload(a, '{"Keep":["00e1-10c2"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2124 self.assertNotEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2125 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2126
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2127 b = AnonymizeAndUpload(a, '{"Keep":["00e1,10c2","PatientName"]}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2128 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2129 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2130
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2131 b = AnonymizeAndUpload(a, '{"Keep":["PatientName"],"Replace":{"00e1,10c2":"Hello"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2132 self.assertEqual(s1, DoGet(_REMOTE, '/instances/%s/content/PatientName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2133 self.assertTrue(DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b).startswith('Hello'))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2134
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2135 # Examples from the Wiki
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
2136 b = AnonymizeAndUpload(a, '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2137 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2138 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2139 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2140 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2141 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2142 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2143 DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % a)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2144 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2145
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
2146 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Remove":["InstitutionName"],"RemovePrivateTags": true,"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2147 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2148 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2149 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2150 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008,103e' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2151 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/00e1-10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2152 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2153
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
2154 b = ModifyAndUpload(a, '{"Replace":{"PatientName":"hello","PatientID":"world"},"Force":true}')
18
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2155 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/0010-0010' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2156 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/PatientID' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2157 self.assertEqual(s2, DoGet(_REMOTE, '/instances/%s/content/00e1,10c2' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2158 self.assertEqual(s3, DoGet(_REMOTE, '/instances/%s/content/0008,1030' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2159 self.assertEqual(s4, DoGet(_REMOTE, '/instances/%s/content/0008-103E' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2160 self.assertEqual(s5, DoGet(_REMOTE, '/instances/%s/content/InstitutionName' % b))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2161
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2162
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2163 # Test modify non-existing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2164 i = DoPost(_REMOTE, '/tools/create-dicom',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2165 json.dumps({
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2166 'PatientName' : 'Jodogne',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2167 'Modality' : 'CT',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2168 }))['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2169
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2170 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2171 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % i))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2172 self.assertEqual('CT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2173
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2174 b = ModifyAndUpload(i, '{"Replace":{"StudyDescription":"hello","Modality":"world"}}')
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2175 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2176 self.assertEqual('hello', DoGet(_REMOTE, '/instances/%s/content/StudyDescription' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2177 self.assertEqual('world', DoGet(_REMOTE, '/instances/%s/content/Modality' % b).strip())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 17
diff changeset
2178
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2179
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2180 def test_incoming_jpeg(self):
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2181 def storescu(image, acceptUnknownSopClassUid):
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2182 if acceptUnknownSopClassUid:
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2183 tmp = [ '-xf', GetDatabasePath('UnknownSopClassUid.cfg'), 'Default' ]
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2184 else:
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2185 tmp = [ '-xs' ]
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2186
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2187 with open(os.devnull, 'w') as FNULL:
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2188 subprocess.check_call([ FindExecutable('storescu') ] + tmp +
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2189 [ _REMOTE['Server'], str(_REMOTE['DicomPort']),
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2190 GetDatabasePath(image) ],
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2191 stderr = FNULL)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2192
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2193 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2194 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxDisable.lua')
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2195 self.assertRaises(Exception, lambda: storescu('Knix/Loc/IM-0001-0001.dcm', False))
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2196 self.assertRaises(Exception, lambda: storescu('UnknownSopClassUid.dcm', True))
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2197 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2198 InstallLuaScriptFromPath(_REMOTE, 'Lua/TransferSyntaxEnable.lua')
62
f9c4ce95756f removal of useless information
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 61
diff changeset
2199 DoPost(_REMOTE, '/tools/execute-script', "print('All special transfer syntaxes are now accepted')")
61
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2200 storescu('Knix/Loc/IM-0001-0001.dcm', False)
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2201 storescu('UnknownSopClassUid.dcm', True)
967d44407308 test UnknownSopClassAccepted option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 60
diff changeset
2202 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2203
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2204
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2205 def test_storescu_jpeg(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2206 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2207
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2208 knixStudy = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2209 i = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID']
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2210
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2211 # This is JPEG lossless
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2212 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header' % i)['0002,0010']['Value'])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2213 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?simplify' % i)['TransferSyntaxUID'])
136
5634ef96fcc5 testing "short" option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 133
diff changeset
2214 self.assertEqual('1.2.840.10008.1.2.4.70', DoGet(_REMOTE, '/instances/%s/header?short' % i)['0002,0010'])
64
369e439cdfd6 test access header
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 63
diff changeset
2215
21
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2216 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0002.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2217 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0003.dcm')
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2218
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2219 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2220 b = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2221 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2222 DoPost(_REMOTE, '/modalities/orthanctest/store', [ knixStudy, a, b ])
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2223 self.assertEqual(5, len(DoGet(_LOCAL, '/instances')))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2224
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2225 self.assertEqual(3, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2226
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2227 DropOrthanc(_REMOTE)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2228 self.assertEqual(0, len(DoGet(_REMOTE, '/exports')['Exports']))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2229
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2230
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2231 def test_pixel_data(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2232 jpeg = UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2233 color = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2234 phenix = UploadInstance(_REMOTE, 'Phenix/IM-0001-0001.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2235
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2236 phenixSize = 358 * 512 * 2
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2237 colorSize = 1000 * 1000 * 3
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2238 jpegSize = 51918
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2239
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2240 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2241 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2242 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2243
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2244 self.assertEqual(0, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2245 self.assertEqual(jpegSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/1' % jpeg)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2246
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2247 self.assertEqual(phenixSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % phenix)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2248 self.assertEqual(colorSize, len(DoGet(_REMOTE, '/instances/%s/content/7fe0-0010/0' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2249
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2250
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2251 def test_decode_brainix(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2252 brainix = [
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2253 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID'], # (*)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2254 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')['ID'], # JPEG-LS, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2255 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')['ID'], # JPEG, same as (*) (since Orthanc 0.7.6)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2256 ]
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2257 h = '6fb11b932d535c2be04beabd99793ff8'
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2258 maxValue = 426.0
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2259
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2260 truth = Image.open(GetDatabasePath('Formats/Brainix.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2261 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2262 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2263 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2264
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2265 truth2 = map(lambda x: min(255, x), truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2266 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2267 self.AssertSameImages(truth2, '/instances/%s/image-uint8' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2268
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2269 truth2 = map(lambda x: x * 255.0 / maxValue, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2270 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2271 self.AssertSameImages(truth2, '/instances/%s/preview' % i)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2272
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2273 for i in brainix:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2274 self.assertEqual(h, ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % i)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2275
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2276
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2277 def test_decode_color(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2278 imagej = UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2279 color = UploadInstance(_REMOTE, 'ColorTestMalaterre.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2280
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2281 for i in [ imagej, color ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2282 for j in [ 'image-uint8', 'image-uint16', 'image-int16' ]:
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2283 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/%s' % (i, j)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2284
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2285 self.assertEqual('c14c687f7a1ea9fe022479fc87c67274', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2286 self.assertEqual('a87d122918a56f803bcfe9d2586b9125', ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2287
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2288 self.assertEqual('30cc46bfa7aba77a40e4178f6184c25a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % imagej)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2289 self.assertEqual('ff195005cef06b59666fd220a9b4cd9a', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % color)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2290
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2291
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2292 def test_decode_rf(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2293 rf = UploadInstance(_REMOTE, 'KarstenHilbertRF.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2294 truth = Image.open(GetDatabasePath('Formats/KarstenHilbertRF.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2295
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2296 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2297 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2298 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2299 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % rf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2300
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2301 self.assertEqual('42254d70efd2f4a1b8f3455909689f0e', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % rf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2302
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2303
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2304 def test_decode_multiframe(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2305 mf = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2306
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2307 # Test the first frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2308 truth = Image.open(GetDatabasePath('Formats/Multiframe0.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2309 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint8' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2310 self.AssertSameImages(truth.getdata(), '/instances/%s/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2311 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2312 self.AssertSameImages(truth.getdata(), '/instances/%s/preview' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2313 self.assertEqual('9812b99d93bbcd4e7684ded089b5dfb3', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % mf)))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2314
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2315 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/0/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2316
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2317 # Test the last frame
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2318 truth = Image.open(GetDatabasePath('Formats/Multiframe75.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2319 self.AssertSameImages(truth.getdata(), '/instances/%s/frames/75/image-uint16' % mf)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2320
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2321
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2322 def test_decode_signed(self):
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2323 signed = UploadInstance(_REMOTE, 'SignedCT.dcm')['ID']
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2324 minValue = -2000
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2325 maxValue = 4042
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2326
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2327 truth = Image.open(GetDatabasePath('Formats/SignedCT.png'))
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2328 self.AssertSameImages(truth.getdata(), '/instances/%s/image-int16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2329
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2330 truth2 = map(lambda x: 0 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2331 self.AssertSameImages(truth2, '/instances/%s/image-uint16' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2332
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2333 truth3 = map(lambda x: 255 if x >= 256 else x, truth2)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2334 self.AssertSameImages(truth3, '/instances/%s/image-uint8' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2335
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2336 tmp = map(lambda x: x - 65536 if x >= 32768 else x, truth.getdata())
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2337 tmp = map(lambda x: (255.0 * (x - minValue)) / (maxValue - minValue), tmp)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2338 self.AssertSameImages(tmp, '/instances/%s/preview' % signed)
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2339
2a29bcff60a7 tests of image decoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 18
diff changeset
2340 self.assertEqual('b57e6c872a3da50877c7da689b03a444', ComputeMD5(DoGet(_REMOTE, '/instances/%s/matlab' % signed)))
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2341
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2342
46
85b2e36ed392 explicit GoogleCode source
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 45
diff changeset
2343 def test_googlecode_issue_32(self):
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2344 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/tools/default-encoding', 'nope'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2345 self.assertEqual('Windows1251', DoPut(_REMOTE, '/tools/default-encoding', 'Windows1251'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2346 self.assertEqual('Windows1251', DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2347
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2348 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2349 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2350 self.assertEqual(u'Рентгенография', tags['SeriesDescription'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2351 self.assertEqual(u'Таз', tags['BodyPartExamined'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2352 self.assertEqual(u'Прямая', tags['ViewPosition'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2353
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2354 # Replay the same test using Latin1 as default encoding: This must fail
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2355 self.assertEqual('Latin1', DoPut(_REMOTE, '/tools/default-encoding', 'Latin1'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2356
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2357 DoDelete(_REMOTE, '/instances/%s' % f)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2358 f = UploadInstance(_REMOTE, 'Issue32.dcm')['ID']
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2359 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % f)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2360 self.assertNotEqual(u'Рентгенография', tags['SeriesDescription'])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2361
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
2362
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2363 def test_encodings(self):
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2364 # Latin-1 (ISO_IR 100)
22
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2365 brainix = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2366 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % brainix)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 21
diff changeset
2367 self.assertEqual(u'IRM cérébrale, neuro-crâne', tags['StudyDescription'])
23
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2368
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2369 # Latin-2 (ISO_IR 101)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2370 a = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID']
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2371 i = DoGet(_REMOTE, '/instances/%s/simplified-tags' % a)
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2372 # dcm2xml MarekLatin2.dcm | iconv -f latin2 -t utf-8 | xmllint --format -
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2373 self.assertEqual('Imię i Nazwisko osoby opisującej',
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2374 i['ContentSequence'][4]['ConceptNameCodeSequence'][0]['CodeMeaning'].encode('utf-8'))
30ecc857fa07 test latin-2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 22
diff changeset
2375
26
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2376
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2377 def test_storescu_custom_aet(self):
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2378 # This tests a feature introduced in Orthanc 0.9.1: "Custom
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2379 # setting of the local AET during C-Store SCU (both in Lua and
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2380 # in the REST API)."
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2381 # https://groups.google.com/forum/#!msg/orthanc-users/o5qMULformU/wZjW2iSaMcAJ
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2382
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2383 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2384
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2385 a = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2386 b = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2387 c = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0003.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2388
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2389 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2390 'LocalAet' : 'YOP',
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2391 'Resources' : [ a['ID'], b['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2392 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2393
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2394 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2395 self.assertEqual('YOP', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2396
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2397 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2398 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2399
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2400 j = DoPost(_REMOTE, '/modalities/orthanctest/store', {
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2401 'Resources' : [ c['ID'] ]
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2402 })
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2403
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2404 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2405 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % c['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2406
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2407 DropOrthanc(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2408 DropOrthanc(_LOCAL)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2409
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
2410 InstallLuaScriptFromPath(_REMOTE, 'Lua/AutoroutingChangeAet.lua')
26
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2411 DoPost(_REMOTE, '/tools/execute-script', 'aet = "HELLO"', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2412
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2413 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2414 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2415 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2416 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2417 self.assertEqual('HELLO', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % a['ID']))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2418
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2419 DoPost(_REMOTE, '/tools/execute-script', 'aet = nill', 'application/lua')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2420 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2421 WaitEmpty(_REMOTE)
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2422 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
040f6ef1394a test_storescu_custom_aet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 23
diff changeset
2423 self.assertEqual('ORTHANC', DoGet(_LOCAL, '/instances/%s/metadata/RemoteAET' % b['ID']))
34
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2424
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2425 def test_resources_since_limit(self):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2426 # Upload 16 instances
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2427 for i in range(4):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2428 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2429 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2430 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2431 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-000%d.dcm' % (i + 1))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2432
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2433 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2434 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2435 self.assertEqual(4, len(DoGet(_REMOTE, '/series')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2436 self.assertEqual(16, len(DoGet(_REMOTE, '/instances')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2437
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2438 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&since=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2439 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/patients&limit=10' % i))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2440
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2441 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=0&limit=0')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2442 self.assertEqual(2, len(DoGet(_REMOTE, '/patients?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2443 self.assertEqual(2, len(DoGet(_REMOTE, '/studies?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2444 self.assertEqual(4, len(DoGet(_REMOTE, '/series?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2445 self.assertEqual(16, len(DoGet(_REMOTE, '/instances?since=0&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2446 self.assertEqual(1, len(DoGet(_REMOTE, '/patients?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2447 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2448 self.assertEqual(0, len(DoGet(_REMOTE, '/patients?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2449 self.assertEqual(1, len(DoGet(_REMOTE, '/studies?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2450 self.assertEqual(3, len(DoGet(_REMOTE, '/series?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2451 self.assertEqual(2, len(DoGet(_REMOTE, '/series?since=2&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2452 self.assertEqual(1, len(DoGet(_REMOTE, '/series?since=3&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2453 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=4&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2454 self.assertEqual(0, len(DoGet(_REMOTE, '/series?since=100&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2455 self.assertEqual(15, len(DoGet(_REMOTE, '/instances?since=1&limit=100')))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2456
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2457 for limit in [ 1, 2, 3, 7, 16, 17 ]:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2458 s = {}
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2459 since = 0
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2460 while True:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2461 t = DoGet(_REMOTE, '/instances?since=%d&limit=%d' % (since, limit))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2462 if len(t) == 0:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2463 break
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2464
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2465 since += len(t)
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2466 for i in t:
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2467 s[i] = None
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2468
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2469 self.assertEqual(16, len(s))
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2470 for instance in DoGet(_REMOTE, '/instances'):
1047d7bc5210 test limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 28
diff changeset
2471 self.assertTrue(instance in s)
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2472
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2473
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2474 def test_create_pdf(self):
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2475 # Upload 4 instances
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2476 brainixInstance = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2477 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2478 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2479 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2480
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2481 brainixPatient = '16738bc3-e47ed42a-43ce044c-a3414a45-cb069bd0'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2482 brainixStudy = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2483 brainixEpi = '2ac1316d-3e432022-62eabff2-c59f5475-9b1ac3f8'
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2484
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2485 with open(GetDatabasePath('HelloWorld.pdf'), 'rb') as f:
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2486 pdf = f.read()
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2487
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2488 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2489 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2490 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2491 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2492 'Modality' : 'CT',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2493 },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2494 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2495 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2496
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2497 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2498 self.assertEqual('OT', DoGet(_REMOTE, '/instances/%s/content/Modality' % i['ID']).strip())
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2499
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2500 b = DoGet(_REMOTE, '/instances/%s/content/0042-0011' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2501 self.assertEqual(len(b), len(pdf) + 1)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2502 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf + '\0'))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2503
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2504 self.assertRaises(Exception, lambda: DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2505 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2506 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2507 'Tags' : {
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2508 'PatientName' : 'Jodogne',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2509 }
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2510 })))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2511
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2512 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2513 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2514 'Parent' : brainixPatient,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2515 'Tags' : { 'StudyDescription' : 'PDF^Patient' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2516 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2517 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2518
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2519 self.assertEqual(brainixPatient, DoGet(_REMOTE, '/instances/%s/patient' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2520
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2521 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2522 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2523 'Parent' : brainixStudy,
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2524 'Tags' : { 'SeriesDescription' : 'PDF^Study' },
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2525 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2526 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2527
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2528 self.assertEqual(brainixStudy, DoGet(_REMOTE, '/instances/%s/study' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2529
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2530 i = DoPost(_REMOTE, '/tools/create-dicom',
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2531 json.dumps({
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2532 'Parent' : brainixEpi,
37
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 36
diff changeset
2533 'Tags' : { 'SpecificCharacterSet' : 'ISO_IR 13' },
36
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2534 'Content' : 'data:application/pdf;base64,' + base64.b64encode(pdf)
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2535 }))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2536
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2537 self.assertEqual(brainixEpi, DoGet(_REMOTE, '/instances/%s/series' % i['ID'])['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2538
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2539 b = DoGet(_REMOTE, '/instances/%s/pdf' % i['ID'])
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2540 self.assertEqual(len(b), len(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2541 self.assertEqual(ComputeMD5(b), ComputeMD5(pdf))
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2542
42ad759ef40a test PDF embedding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 34
diff changeset
2543 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/pdf' % brainixInstance))
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2544
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2545
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2546 def test_create_series(self):
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2547 i = DoPost(_REMOTE, '/tools/create-dicom',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2548 json.dumps({
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2549 'Tags' : {
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2550 'SpecificCharacterSet' : 'ISO_IR 100',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2551 'PatientName' : 'Sébastien Jodogne',
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2552 'Modality' : 'CT',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2553 },
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2554 'Content' : [
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2555 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2556 'Content': 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==', # red dot in RGBA
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2557 'Tags' : { 'ImageComments' : 'Tutu' }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2558 },
38
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2559 'data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAAoUlEQVQ4jZ2SWw3EIBREjwUsYAELa2EtoAULFUCyXAtroRZqoRbox254BdLC/DZnZjoXWJFgCDg8egW2CBEhEnDzyRk+Ecxz2KP/0AL8S99T+jQccAVs22qKwAuPuq0uyNg9cPLh3am+pe/dkHLZtqJHj6vXJrZ7nvzvxxgemXgUwnGfXqpee09mUwp8m022OYP6bLF7mVuVe0y/umxinsAXRd9z0k1ubWsAAAAASUVORK5CYII=',
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2560 ]
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2561 }))
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2562
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2563 s = DoGet(_REMOTE, i['Path'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2564 self.assertEqual('Series', s['Type'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2565 self.assertEqual(s['ID'], i['ID'])
d147e36c6d18 test_create_series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 37
diff changeset
2566 self.assertEqual(2, len(s['Instances']))
39
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2567 self.assertEqual(2, s['ExpectedNumberOfInstances'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 38
diff changeset
2568 self.assertEqual('Complete', s['Status'])
40
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2569
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2570 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2571 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % s['Instances'][1])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2572 self.assertTrue('ImageComments' in a or 'ImageComments' in b)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2573 if 'ImageComments' in a:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2574 self.assertEqual('Tutu', a['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2575 else:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2576 self.assertEqual('Tutu', b['ImageComments'])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2577
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2578 patient = DoGet(_REMOTE, '/instances/%s/patient' % s['Instances'][0])
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2579 self.assertEqual(patient['MainDicomTags']['PatientName'].encode('utf-8'),
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 39
diff changeset
2580 'Sébastien Jodogne')
47
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2581
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2582
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2583 def test_create_binary(self):
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2584 binary = ''.join(map(chr, range(256)))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2585 encoded = 'data:application/octet-stream;base64,' + base64.b64encode(binary)
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2586 tags = {
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2587 'PatientName' : 'Jodogne',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2588 '8899-8899' : encoded
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2589 }
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2590
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2591 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2592 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2593 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2594 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2595
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2596 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2597 self.assertEqual(binary, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2598
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2599 i = DoPost(_REMOTE, '/tools/create-dicom',
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2600 json.dumps({
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2601 'InterpretBinaryTags' : False,
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2602 'Tags' : tags
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2603 }))
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2604
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2605 self.assertEqual('Jodogne', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i['ID']).strip())
f610491f74c3 test_create_binary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 46
diff changeset
2606 self.assertEqual(encoded, DoGet(_REMOTE, '/instances/%s/content/8899-8899' % i['ID'])[0:-1])
48
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2607
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2608
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2609 def test_patient_ids_collision(self):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2610 # Upload 3 instances from 3 different studies, but with the
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2611 # same PatientID
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2612 for i in range(3):
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2613 UploadInstance(_REMOTE, 'PatientIdsCollision/Image%d.dcm' % (i + 1))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2614
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2615 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2616 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2617 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2618 self.assertEqual('COMMON', DoGet(_REMOTE, '/patients/%s' % a[0]) ['MainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2619
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2620 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2621 'CaseSensitive' : True,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2622 'Query' : { 'PatientName' : 'FOO\\HELLO' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2623 self.assertEqual(2, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2624
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2625 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Series',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2626 'CaseSensitive' : False,
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2627 'Query' : { 'PatientName' : 'Foo' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2628 self.assertEqual(1, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2629 self.assertEqual('FOO^SERIES', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['MainDicomTags']['StudyDescription'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2630 self.assertEqual('FOO', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientName'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2631 self.assertEqual('COMMON', DoGet(_REMOTE, '/series/%s/study' % a[0]) ['PatientMainDicomTags']['PatientID'])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2632
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2633 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2634 'Query' : { 'PatientName' : '*' }})
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2635 self.assertEqual(3, len(a))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2636 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['MainDicomTags']['StudyDescription'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2637 self.assertTrue('FOO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2638 self.assertTrue('HELLO^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2639 self.assertTrue('WORLD^SERIES' in d)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2640
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2641 d = map(lambda x: DoGet(_REMOTE, '/studies/%s' % x) ['PatientMainDicomTags']['PatientID'], a)
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2642 self.assertEqual(1, len(set(d)))
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2643 self.assertEqual('COMMON', d[0])
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2644
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2645 for i in a:
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2646 d = DoGet(_REMOTE, '/studies/%s' % i) ['MainDicomTags']['StudyDescription']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2647 p = DoGet(_REMOTE, '/studies/%s' % i) ['PatientMainDicomTags']['PatientName']
e4352463ff74 test_patient_ids_collision
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 47
diff changeset
2648 self.assertEqual('%s^SERIES' % p, d)
49
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2649
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2650
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2651 def test_bitbucket_issue_4(self):
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2652 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2653 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2654 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2655 UploadInstance(_REMOTE, 'Formats/Jpeg.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2656 UploadInstance(_REMOTE, 'Formats/JpegLossless.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2657 UploadInstance(_REMOTE, 'Formats/Rle.dcm')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2658
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2659 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2660 self.assertEqual(6, len(DoGet(_REMOTE, '/instances')))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2661
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2662 p = DoGet(_REMOTE, '/patients')
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2663 self.assertEqual(2, len(p))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2664 i1 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[0]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2665 i2 = map(lambda x: x['ID'], DoGet(_REMOTE, '/patients/%s/instances' % p[1]))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2666 self.assertEqual(3, len(i1))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2667 self.assertEqual(3, len(i2))
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2668
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2669 j = DoPost(_REMOTE, '/modalities/orthanctest/store', i2[0:1] + i1 + i2[1:3])
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2670
e7f9b8199545 test_bitbucket_issue_4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 48
diff changeset
2671 self.assertEqual(6, len(DoGet(_LOCAL, '/instances')))
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2672
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2673
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2674 def test_create_sequence(self):
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2675 i = DoPost(_REMOTE, '/tools/create-dicom',
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2676 json.dumps({
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2677 'Tags' : {
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2678 'SpecificCharacterSet': 'ISO_IR 100', # Encode using Latin1
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2679 'PatientName': 'Jodogne^',
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2680 'ReferencedStudySequence': GenerateTestSequence(),
50
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2681 }
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2682 }))['ID']
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2683
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2684 self.assertEqual('Jodogne^', DoGet(_REMOTE, '/instances/%s/content/PatientName' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2685 self.assertEqual('Hello^', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2686 self.assertEqual('Toto', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/0/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2687 self.assertEqual('Tata', DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/0/ReferencedStudySequence/1/StudyDescription' % i))
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2688 self.assertEqual(u'Sébastien^'.encode('latin-1'),
8de63d56cf11 test_create_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 49
diff changeset
2689 DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence/1/StudyDescription' % i))
51
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2690
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2691
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2692 def test_modify_sequence(self):
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2693 i = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2694 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % i))
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2695
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2696 j = DoPost(_REMOTE, '/instances/%s/modify' % i,
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2697 json.dumps({
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2698 "Replace" : {
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2699 "PatientName" : "hello",
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2700 'ReferencedStudySequence': GenerateTestSequence(),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2701 },
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2702 }),
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2703 'application/json')
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2704 j = DoPost(_REMOTE, '/instances', j, 'application/dicom')['ID']
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2705 DoDelete(_REMOTE, '/instances/%s' % i)
264a20a0276d test_modify_sequence
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 50
diff changeset
2706
52
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2707 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/content/ReferencedStudySequence' % j)))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2708
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2709
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2710 def test_compression(self):
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2711 i = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2712
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2713 data = DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % i)[1]
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2714
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2715 # "StorageCompression" is enabled in the Orthanc to be tested,
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2716 # uncompress the data before running the test
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2717 if DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i) != 0:
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2718 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2719
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2720 cs = DoGet(_REMOTE, '/statistics')['TotalDiskSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2721 us = DoGet(_REMOTE, '/statistics')['TotalUncompressedSize']
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2722 size = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2723 md5 = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2724 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2725 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2726 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2727
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2728 ops = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2729 self.assertTrue('compress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2730 self.assertTrue('uncompress' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2731 self.assertTrue('is-compressed' in ops)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2732 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2733 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2734
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2735 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/compress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2736 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2737 self.assertEqual(1, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2738 self.assertLess(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2739 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2740 self.assertGreater(len(data), len(DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1]))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2741 self.assertGreater(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2742 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2743 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2744 self.assertNotEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2745
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2746 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/uncompress' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2747 DoPost(_REMOTE, '/instances/%s/attachments/dicom-as-json/verify-md5' % i)
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2748 self.assertEqual(0, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/is-compressed' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2749 self.assertEqual(data, DoGetRaw(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-data' % i)[1])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2750 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2751 self.assertEqual(size, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/size' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2752 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2753 self.assertEqual(md5, DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/compressed-md5' % i))
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2754 self.assertEqual(cs, DoGet(_REMOTE, '/statistics')['TotalDiskSize'])
7c08e542db23 test_compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 51
diff changeset
2755 self.assertEqual(us, DoGet(_REMOTE, '/statistics')['TotalUncompressedSize'])
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2756
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2757
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2758 def test_ordered_slices(self):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2759 i = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2760 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2761 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2762 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2763 self.assertEqual(1, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2764 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/file', o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2765 self.assertEqual(76, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2766 for j in range(76):
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2767 self.assertEqual('/instances/9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02/frames/%d' % j, o['Slices'][j])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2768
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2769 self.assertEqual(1, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2770 self.assertEqual('9e05eb0a-18b6268c-e0d36085-8ddab517-3b5aec02', o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2771 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2772 self.assertEqual(76, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2773
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2774 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2775 j = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2776 k = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0003.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2777 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2778 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2779
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2780 self.assertEqual('Volume', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2781 self.assertEqual(3, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2782 self.assertEqual(3, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2783 self.assertEqual('/instances/%s/file' % i, o['Dicom'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2784 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2785 self.assertEqual('/instances/%s/file' % k, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2786 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][2])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2787 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2788 self.assertEqual('/instances/%s/frames/0' % k, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2789
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2790 self.assertEqual(3, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2791 self.assertEqual(k, o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2792 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2793 self.assertEqual(1, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2794 self.assertEqual(j, o['SlicesShort'][1][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2795 self.assertEqual(0, o['SlicesShort'][1][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2796 self.assertEqual(1, o['SlicesShort'][1][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2797 self.assertEqual(i, o['SlicesShort'][2][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2798 self.assertEqual(0, o['SlicesShort'][2][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2799 self.assertEqual(1, o['SlicesShort'][2][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2800
53
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2801 i = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0001.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2802 j = UploadInstance(_REMOTE, 'Beaufix/IM-0001-0002.dcm')['ID']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2803 s = DoGet(_REMOTE, '/instances/%s' % i)['ParentSeries']
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2804 o = DoGet(_REMOTE, '/series/%s/ordered-slices' % s)
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2805
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2806 self.assertEqual('Sequence', o['Type'])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2807 self.assertEqual(2, len(o['Dicom']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2808 self.assertEqual(2, len(o['Slices']))
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2809 self.assertEqual('/instances/%s/file' % i, o['Dicom'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2810 self.assertEqual('/instances/%s/file' % j, o['Dicom'][1])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2811 self.assertEqual('/instances/%s/frames/0' % i, o['Slices'][0])
e0d1ee04119f test_ordered_slices
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 52
diff changeset
2812 self.assertEqual('/instances/%s/frames/0' % j, o['Slices'][1])
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2813
68
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2814 self.assertEqual(2, len(o['SlicesShort']))
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2815 self.assertEqual(i, o['SlicesShort'][0][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2816 self.assertEqual(0, o['SlicesShort'][0][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2817 self.assertEqual(1, o['SlicesShort'][0][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2818 self.assertEqual(j, o['SlicesShort'][1][0])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2819 self.assertEqual(0, o['SlicesShort'][1][1])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2820 self.assertEqual(1, o['SlicesShort'][1][2])
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2821
a8d1a347a701 SlicesShort
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 67
diff changeset
2822
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2823
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2824 def test_incoming_movescu_accession(self):
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2825 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2826
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2827 # No matching patient, so no job is created
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2828 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2829 CallMoveScu([ '--study', '-k', '0008,0052=STUDY', '-k', 'AccessionNumber=nope' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2830 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2831 CallMoveScu([ '--study', '-k', '0008,0052=PATIENT', '-k', 'AccessionNumber=A10003245599' ])
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2832 self.assertEqual(0, len(DoGet(_LOCAL, '/patients')))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2833
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2834 # 1 Matching patient, track the job
138
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2835 self.assertTrue(MonitorJob(_REMOTE, lambda: CallMoveScu([
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2836 '--study',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2837 '-k', '0008,0052=STUDY',
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2838 '-k', 'AccessionNumber=A10003245599'
0682740fcfcb cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 137
diff changeset
2839 ])))
137
412d5f70447e testing asynchronous c-move
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 136
diff changeset
2840
54
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2841 self.assertEqual(1, len(DoGet(_LOCAL, '/patients')))
c5f8a6b0d85e test_incoming_movescu_accession
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 53
diff changeset
2842
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2843
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2844 def test_dicom_to_json(self):
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2845 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2846 j = UploadInstance(_REMOTE, 'PrivateTags.dcm')['ID']
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2847
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2848 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2849 with open(GetDatabasePath('PrivateMDNTagsSimplify.json'), 'r') as f:
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2850 self.assertTrue(CompareTags(t, json.loads(f.read()), [
123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2851 # Tags for compatibility with DCMTK 3.6.0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2852 'RETIRED_OtherPatientIDs',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2853 'OtherPatientIDs',
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
2854 'ACR_NEMA_2C_VariablePixelDataGroupLength',
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2855 ]))
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2856
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2857 t = DoGet(_REMOTE, '/instances/%s/tags' % i)
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2858 with open(GetDatabasePath('PrivateMDNTagsFull.json'), 'r') as f:
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
2859 self.assertTrue(CompareTags(t, json.loads(f.read()), [
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
2860 ]))
55
a395fd51cc4f test_dicom_to_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 54
diff changeset
2861
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2862 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % j)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2863 with open(GetDatabasePath('PrivateTagsSimplify.json'), 'r') as f:
80
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2864 self.assertTrue(CompareTags(t, json.loads(f.read()), [
8466dbfcb22b fix test against dcmtk 3.6.1
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 79
diff changeset
2865 ]))
60
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2866
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2867 t = DoGet(_REMOTE, '/instances/%s/tags' % j)
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2868 with open(GetDatabasePath('PrivateTagsFull.json'), 'r') as f:
cd3c7f70f139 test backward compatibility with Orthanc 0.9.4
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 59
diff changeset
2869 a = json.loads(f.read())
65
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2870 aa = json.dumps(a).replace('2e+022', '2e+22')
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2871 tt = json.dumps(t).replace('2e+022', '2e+22')
09fc27e0899a patch for testing windows builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 64
diff changeset
2872 self.assertEqual(aa, tt)
57
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2873
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2874
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2875 def test_batch_archive(self):
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2876 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2877 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2878 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2879 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2880 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2881 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2882 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2883 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm')
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2884
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2885 s = DoPost(_REMOTE, '/tools/create-archive', [ ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2886 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2887 self.assertEqual(0, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2888
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2889 # One patient
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2890 s = DoPost(_REMOTE, '/tools/create-archive', [ 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17' ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2891 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2892 self.assertEqual(4, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2893
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2894 # One patient + twice its study + one series from other patient
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2895 s = DoPost(_REMOTE, '/tools/create-archive', [
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2896 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2897 '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2898 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2899 ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2900 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2901 self.assertEqual(6, len(z.namelist()))
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2902
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2903 # One patient + one series + one instance
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2904 s = DoPost(_REMOTE, '/tools/create-archive', [
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2905 'ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2906 '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0',
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2907 '1d429ccb-bdcc78a1-7d129d6a-ba4966ed-fe4dbd87'
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2908 ])
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2909 z = zipfile.ZipFile(StringIO(s), "r")
784a544706cf test_batch_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 56
diff changeset
2910 self.assertEqual(7, len(z.namelist()))
59
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2911
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2912
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2913 def test_decode_brainix_as_jpeg(self):
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2914 i = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2915
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2916 j = GetImage(_REMOTE, '/instances/%s/preview' % i)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2917 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2918 self.assertEqual(j.size[0], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2919 self.assertEqual(j.size[1], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2920
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2921 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : '*/*' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2922 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2923
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2924 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/*' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2925 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2926
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2927 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/png' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2928 self.assertEqual('PNG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2929
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2930 j = GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2931 self.assertEqual('JPEG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2932 self.assertEqual(j.size[0], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2933 self.assertEqual(j.size[1], 256)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2934
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2935 a = len(DoGet(_REMOTE, '/instances/%s/preview?quality=50' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2936 b = len(DoGet(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2937 self.assertLess(a, b)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2938
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2939 j = GetImage(_REMOTE, '/instances/%s/image-uint8' % i, headers = { 'Accept' : 'image/jpeg' })
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2940 self.assertEqual('JPEG', j.format)
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2941
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2942 # 16bit encoding is not supported with JPEG
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2943 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-uint16' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2944 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/image-int16' % i, headers = { 'Accept' : 'image/jpeg' }))
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2945
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2946 # No matching content type
84378ada15ab test_decode_brainix_as_jpeg
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 58
diff changeset
2947 self.assertRaises(Exception, lambda: GetImage(_REMOTE, '/instances/%s/preview' % i, headers = { 'Accept' : 'application/pdf' }))
69
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2948
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2949
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2950
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2951 def test_media_encodings(self):
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2952 ascii = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2953 latin1 = UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2954 latin2 = UploadInstance(_REMOTE, 'MarekLatin2.dcm')['ID']
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2955
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2956 tmp = DoPost(_REMOTE, '/tools/create-media', [ascii,latin1,latin2])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2957 z = zipfile.ZipFile(StringIO(tmp), "r")
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2958
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2959 self.assertEqual(4, len(z.namelist()))
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2960 self.assertTrue('IMAGES/IM0' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2961 self.assertTrue('IMAGES/IM1' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2962 self.assertTrue('IMAGES/IM2' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2963 self.assertTrue('DICOMDIR' in z.namelist())
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2964
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2965 try:
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2966 os.remove('/tmp/DICOMDIR')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2967 except:
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2968 # The file does not exist
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2969 pass
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2970
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2971 z.extract('DICOMDIR', '/tmp')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2972 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2973 stderr = subprocess.STDOUT).split('\n')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2974
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2975 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2976 stderr = subprocess.STDOUT).split('\n')
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2977 self.assertEqual(1, len(a))
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2978 self.assertEqual('', a[0])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2979
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2980 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2981 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2982 self.assertTrue(re.search('1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114333648576', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2983 self.assertTrue(re.search('1.2.826.0.1.3680043.2.1569.1.4.323026757.1700.1399452091.57', a) != None)
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2984
83fd88230097 test_media_encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 68
diff changeset
2985 os.remove('/tmp/DICOMDIR')
71
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2986
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2987
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2988 def test_findscu_counters(self):
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2989 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2990 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0001.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2991 UploadInstance(_REMOTE, 'Comunix/Pet/IM-0001-0002.dcm')
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2992
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2993 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedStudies' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2994 s = re.findall('\(0020,1200\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2995 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2996 self.assertTrue('1 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2997
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2998 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedSeries' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
2999 s = re.findall('\(0020,1202\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3000 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3001 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3002
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3003 i = CallFindScu([ '-k', '0008,0052=PATIENT', '-k', 'NumberOfPatientRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3004 s = re.findall('\(0020,1204\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3005 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3006 self.assertTrue('3 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3007
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3008 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedSeries' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3009 s = re.findall('\(0020,1206\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3010 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3011 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3012
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3013 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'NumberOfStudyRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3014 s = re.findall('\(0020,1208\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3015 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3016 self.assertTrue('3 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3017
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3018 i = CallFindScu([ '-k', '0008,0052=SERIES', '-k', 'NumberOfSeriesRelatedInstances' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3019 s = re.findall('\(0020,1209\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3020 self.assertEqual(2, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3021 self.assertTrue('1 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3022 self.assertTrue('2 ' in s)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3023
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3024 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'ModalitiesInStudy' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3025 s = re.findall('\(0008,0061\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3026 self.assertEqual(1, len(s))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3027 t = map(lambda x: x.strip(), s[0].split('\\'))
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3028 self.assertTrue('PT' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3029 self.assertTrue('CT' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3030
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3031 i = CallFindScu([ '-k', '0008,0052=STUDY', '-k', 'SOPClassesInStudy' ])
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3032 s = re.findall('\(0008,0062\).*?\[(.*?)\]', i)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3033 self.assertEqual(1, len(s))
176
48cc188ffb09 strip trailing 0 char that appears with some findscu versions
am@osimis.io
parents: 175
diff changeset
3034 t = map(lambda x: x.strip('\x00'), s[0].split('\\'))
71
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3035 self.assertTrue('1.2.840.10008.5.1.4.1.1.2' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3036 self.assertTrue('1.2.840.10008.5.1.4.1.1.128' in t)
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3037
48740070cbf1 TDD: tests for ongoing development of counter tags in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 70
diff changeset
3038
78
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3039 def test_decode_transfer_syntax(self):
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3040 def Check(t, md5):
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3041 i = UploadInstance(_REMOTE, 'TransferSyntaxes/%s.dcm' % t)['ID']
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3042
89
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
3043 if t != '1.2.840.10008.1.2': # This file has no meta header
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
3044 transferSyntax = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % i)
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
3045 self.assertEqual(t, transferSyntax)
74b7b9aed5f8 test TransferSyntax metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 87
diff changeset
3046
78
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3047 if md5 == None:
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3048 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/preview' % i))
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3049 else:
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3050 m = ComputeMD5(DoGet(_REMOTE, '/instances/%s/preview' % i))
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3051 self.assertEqual(m, md5)
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3052
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3053 Check('1.2.840.10008.1.2.1', 'fae08d5415c4c0cd2cdbae4522408631')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3054 Check('1.2.840.10008.1.2.2', 'f3d9784768b8feb54d6a50b6d5c37682')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3055 Check('1.2.840.10008.1.2.4.50', '496326046974eea718dbc16b997c646b')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3056 Check('1.2.840.10008.1.2.4.51', 'ccbe75909fe5c9f7361b48416a53fc41')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3057 Check('1.2.840.10008.1.2.4.57', '7bbefe11d976b1be4e568915c6a82fc3')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3058 Check('1.2.840.10008.1.2.4.70', '7132cfbc457305b04b59787030c785d2')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3059 Check('1.2.840.10008.1.2.4.80', '6ff51ae525d362e0d04f550a64075a0e')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3060 Check('1.2.840.10008.1.2.4.81', '801579ae7cbf28e604ea74f2c99fa2ca')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3061 Check('1.2.840.10008.1.2.5', '6ff51ae525d362e0d04f550a64075a0e') # RLE, supported since Orthanc 1.0.1
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3062 Check('1.2.840.10008.1.2', 'd54aed9f67a100984b42942cc2e9939b')
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3063 Check('1.2.840.10008.1.2.4.90', None) # JPEG-2000 image, not supported
b89af51797ff test_decode_transfer_syntax
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 74
diff changeset
3064 Check('1.2.840.10008.1.2.4.91', None) # JPEG-2000 image, not supported
79
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3065
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3066
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3067 def test_raw_frame(self):
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3068 s = UploadInstance(_REMOTE, 'Issue22.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3069 self.assertEqual(24, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3070 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3071 self.assertEqual(512 * 512 * 2, len(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3072 self.assertEqual(512 * 512 * 2, len(DoGet(_REMOTE, '/instances/%s/frames/23/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3073 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/24/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3074 self.assertEqual('1914287dc4d958eca21fdaacfb3482fa', ComputeMD5(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3075
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3076 s = UploadInstance(_REMOTE, 'Multiframe.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3077 self.assertEqual(76, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3078 self.assertEqual(186274, len(DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3079 self.assertEqual(189424, len(DoGet(_REMOTE, '/instances/%s/frames/75/raw' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3080 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/76/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3081 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3082 self.assertEqual("L", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3083 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3084 self.assertEqual(512, im.size[1])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3085
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3086 # Test an image with 2 JPEG frames spread over multiple fragments
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3087 s = UploadInstance(_REMOTE, 'LenaTwiceWithFragments.dcm')['ID']
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3088 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/frames' % s)))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3089 a = DoGet(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3090 b = DoGet(_REMOTE, '/instances/%s/frames/1/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3091 self.assertEqual(69214, len(a))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3092 self.assertEqual(ComputeMD5(a), ComputeMD5(b))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3093 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/frames/2/raw' % s))
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3094 im = GetImage(_REMOTE, '/instances/%s/frames/0/raw' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3095 self.assertEqual("RGB", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3096 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3097 self.assertEqual(512, im.size[1])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3098 im = GetImage(_REMOTE, '/instances/%s/frames/0/preview' % s)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3099 self.assertEqual("RGB", im.mode)
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3100 self.assertEqual(512, im.size[0])
962274ebd797 test_raw_frame
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 78
diff changeset
3101 self.assertEqual(512, im.size[1])
81
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3102
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3103
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3104
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3105 def test_rest_movescu(self):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3106 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3107
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3108 # Upload 4 instances
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3109 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3110 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0002.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3111 UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3112 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3113
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3114 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3115 for p in DoGet(_REMOTE, '/patients'):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3116 DoPost(_REMOTE, '/modalities/orthanctest/store', p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3117 DoDelete(_REMOTE, '/patients/%s' % p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3118
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3119 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3120
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3121 # Upload instance Brainix/Flair/IM-0001-0001.dcm
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3122 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Instance',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3123 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3124 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3125 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3126 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3127 'SOPInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314079549',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3128 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3129 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3130
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3131 # Upload series Brainix/Flair/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3132 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3133 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3134 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3135 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3136
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3137 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3138 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3139 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3140 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3141 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114285654497',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3142 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3143 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3144 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3145 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3146 self.assertEqual(1, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3147 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3148
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3149 # Upload series Brainix/Epi/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3150 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Series',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3151 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3152 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3153 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3154 'SeriesInstanceUID' : '1.3.46.670589.11.0.0.11.4.2.0.8743.5.5396.2006120114314125550',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3155 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3156 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3157 self.assertEqual(1, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3158 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3159 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3160 self.assertEqual(3, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3161
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3162 # Upload study Knee/*
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3163 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3164 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3165 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3166 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3167 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3168 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3169 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3170 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3171 self.assertEqual(3, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3172 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3173
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3174 # Reset
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3175 for p in DoGet(_REMOTE, '/patients'):
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3176 DoDelete(_REMOTE, '/patients/%s' % p)
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3177
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3178 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3179
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3180
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3181 # Upload all at once
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3182 DoPost(_REMOTE, '/modalities/orthanctest/move', { 'Level' : 'Study',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3183 'Resources' : [
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3184 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3185 'StudyInstanceUID' : '2.16.840.1.113669.632.20.121711.10000160881',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3186 },
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3187 {
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3188 'StudyInstanceUID' : '2.16.840.1.113669.632.20.1211.10000357775',
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3189 }
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3190 ]})
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3191 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3192 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3193 self.assertEqual(3, len(DoGet(_REMOTE, '/series')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3194 self.assertEqual(4, len(DoGet(_REMOTE, '/instances')))
5920954287dd test_rest_movescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 80
diff changeset
3195
86
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3196
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3197
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3198 def test_reconstruct_json(self):
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3199 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3200
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3201 instance = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3202 first = DoGet(_REMOTE, '/instances/%s/tags' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3203
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3204 self.assertEqual('TWINOW', first['0008,1010']['Value'])
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3205 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3206
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3207 # Cannot delete the "DICOM" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3208 self.assertRaises(Exception, lambda: DoDelete(_REMOTE, '/instances/%s/attachments/dicom' % instance))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3209
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3210 # Can delete the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3211 r = DoDelete(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3212 self.assertTrue(type(r) is dict and len(r) == 0)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3213
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3214 # Only the "DICOM" attachment subsists
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3215 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3216
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3217 # Cannot manually reconstruct the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3218 self.assertRaises(Exception, lambda: DoPut(_REMOTE, '/patients/%s/attachments/dicom-as-json' % patient, 'hello'))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3219
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3220 # Transparently reconstruct the "DICOM as JSON" attachment
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3221 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json' % instance))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3222 second = DoGet(_REMOTE, '/instances/%s/tags' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3223 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % instance)))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3224
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3225 third = DoGet(_REMOTE, '/instances/%s/attachments/dicom-as-json/data' % instance)
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3226 self.assertEqual(str(first), str(second))
0401ef51f5c1 test_reconstruct_json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 83
diff changeset
3227 self.assertEqual(str(first), str(third))
87
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3228
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3229
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3230 def test_reconstruct_json2(self):
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3231 self.assertEqual(0, len(DoGet(_REMOTE, '/patients')))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3232
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3233 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3234 b = UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3235
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3236 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3237 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3238
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3239 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3240 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3241
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3242 DoPost(_REMOTE, '/tools/invalidate-tags', '', 'text/plain')
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3243
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3244 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3245 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3246
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3247 self.assertEqual('BRAINIX', DoGet(_REMOTE, '/instances/%s/tags?simplify' % a)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3248 self.assertEqual('KNEE', DoGet(_REMOTE, '/instances/%s/tags?simplify' % b)['PatientName'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3249
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3250 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % a)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3251 self.assertEqual(2, len(DoGet(_REMOTE, '/instances/%s/attachments' % b)))
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3252
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3253
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3254 def test_private_tags(self):
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3255 i = UploadInstance(_REMOTE, 'PrivateMDNTags.dcm')['ID']
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3256 t = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3257 self.assertEqual('1.2.840.113704.1.111.6320.1342451261.21', t['PET-CT Multi Modality Name'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3258 self.assertEqual('p37s0_na_ctac.img', t['Original Image Filename'])
4b24faec842b test_reconstruct_json2 + test_private_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 86
diff changeset
3259
92
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3260
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3261 def test_findscu_encoding(self):
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3262 # Check out ../Database/Encodings/Generate.sh
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3263 TEST = u'Test-éüäöòДΘĝדصķћ๛ネİ'
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3264 ENCODINGS = {
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3265 'Arabic' : [ 'ISO_IR 127' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3266 'Ascii' : [ 'ISO_IR 6' ], # More accurately, ISO 646
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3267 'Cyrillic' : [ 'ISO_IR 144' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3268 'Greek' : [ 'ISO_IR 126' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3269 'Hebrew' : [ 'ISO_IR 138' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3270 'Japanese' : [ 'ISO_IR 13', 'shift-jis' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3271 'Latin1' : [ 'ISO_IR 100' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3272 'Latin2' : [ 'ISO_IR 101' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3273 'Latin3' : [ 'ISO_IR 109' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3274 'Latin4' : [ 'ISO_IR 110' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3275 'Latin5' : [ 'ISO_IR 148' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3276 'Thai' : [ 'ISO_IR 166', 'tis-620' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3277 'Utf8' : [ 'ISO_IR 192' ],
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3278 }
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3279
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3280 for name in ENCODINGS.iterkeys():
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3281 if len(ENCODINGS[name]) == 1:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3282 ENCODINGS[name].append(name.lower())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3283
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3284 UploadInstance(_REMOTE, 'Encodings/Lena-utf8.dcm')
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3285
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3286 for name in ENCODINGS.iterkeys():
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3287 self.assertEqual(name, DoPut(_REMOTE, '/tools/default-encoding', name))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3288 self.assertEqual(name, DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3289
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3290 i = CallFindScu([ '-k', '0008,0052=STUDY',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3291 '-k', 'SpecificCharacterSet',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3292 '-k', 'PatientName' ])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3293
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3294 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3295 self.assertEqual(1, len(characterSet))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3296 self.assertEqual(ENCODINGS[name][0], characterSet[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3297
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3298 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3299 self.assertEqual(1, len(patientName))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3300
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3301 expected = TEST.encode(ENCODINGS[name][1], 'ignore')
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3302 self.assertEqual(expected, patientName[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3303
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3304
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3305 #for master in ENCODINGS:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3306 for master in [ 'Latin1', 'Utf8', 'Cyrillic' ]: # Shortcut to speedup tests
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3307 self.assertEqual(master, DoPut(_REMOTE, '/tools/default-encoding', master))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3308 self.assertEqual(master, DoGet(_REMOTE, '/tools/default-encoding'))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3309
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3310 for name in ENCODINGS:
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3311 DropOrthanc(_REMOTE)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3312 UploadInstance(_REMOTE, 'Encodings/Lena-%s.dcm' % ENCODINGS[name][1])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3313
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3314 i = CallFindScu([ '-k', '0008,0052=STUDY',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3315 '-k', 'PatientID',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3316 '-k', 'SpecificCharacterSet',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3317 '-k', 'PatientName' ])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3318 i = i.decode(ENCODINGS[master][1])
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3319
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3320 characterSet = re.findall('\(0008,0005\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3321 self.assertEqual(1, len(characterSet))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3322 self.assertEqual(ENCODINGS[master][0], characterSet[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3323
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3324 patientId = re.findall('\(0010,0020\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3325 self.assertEqual(1, len(patientId))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3326 self.assertEqual(ENCODINGS[name][1], patientId[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3327
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3328 patientName = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3329 self.assertEqual(1, len(patientName))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3330
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3331 tmp = ENCODINGS[name][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3332 expected = TEST.encode(tmp, 'ignore').decode(tmp)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3333 tmp = ENCODINGS[master][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3334 expected = expected.encode(tmp, 'ignore').decode(tmp)
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3335
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3336 self.assertEqual(expected, patientName[0].strip())
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3337
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3338
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3339 a = DoPost(_REMOTE, '/tools/find', { 'Expand' : True,
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3340 'Level' : 'Study',
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3341 'Query' : { }})
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3342 self.assertEqual(1, len(a))
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3343
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3344 tmp = ENCODINGS[name][1]
dbcbffb889da test_findscu_encoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 89
diff changeset
3345 self.assertEqual(TEST.encode(tmp, 'ignore').decode(tmp), a[0]["PatientMainDicomTags"]["PatientName"])
96
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3346
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3347
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3348 def test_reconstruct(self):
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3349 def CompareMainDicomTag(expected, instance, level, tag):
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3350 self.assertEqual(expected, DoGet(_REMOTE, '/instances/%s/%s' % (instance, level))['MainDicomTags'][tag].strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3351
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3352 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3353
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3354 studies = DoGet(_REMOTE, '/studies/')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3355 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3356 self.assertEqual(1, len(studies))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3357 self.assertEqual(1, len(DoGet(_REMOTE, '/series/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3358 self.assertEqual(1, len(DoGet(_REMOTE, '/instances/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3359
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3360 modified = DoPost(_REMOTE, '/studies/%s/modify' % studies[0], {
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3361 "Replace" : {
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3362 "StudyDescription" : "hello",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3363 "SeriesDescription" : "world",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3364 "SOPClassUID" : "test",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3365 "SOPInstanceUID" : "myid",
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3366 },
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3367 "Keep" : [ "StudyInstanceUID", "SeriesInstanceUID" ],
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3368 "Force" : True
96
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3369 })
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3370
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3371 instances = DoGet(_REMOTE, '/instances/')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3372 self.assertEqual(1, len(DoGet(_REMOTE, '/patients/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3373 self.assertEqual(1, len(DoGet(_REMOTE, '/studies/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3374 self.assertEqual(1, len(DoGet(_REMOTE, '/series/')))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3375 self.assertEqual(2, len(instances))
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3376
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3377 b = instances[0] if instances[1] == a else instances[1]
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3378
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3379 CompareMainDicomTag('Knee (R)', a, 'study', 'StudyDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3380 CompareMainDicomTag('AX. FSE PD', a, 'series', 'SeriesDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3381 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3382 CompareMainDicomTag('myid', b, '', 'SOPInstanceUID')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3383 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % a).strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3384 self.assertEqual('test', DoGet(_REMOTE, '/instances/%s/metadata/SopClassUid' % b).strip())
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3385
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3386 DoPost(_REMOTE, '/instances/%s/reconstruct' % b, {})
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3387
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3388 CompareMainDicomTag('hello', a, 'study', 'StudyDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3389 CompareMainDicomTag('world', a, 'series', 'SeriesDescription')
272d1229cb49 test reconstruction of tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 95
diff changeset
3390 CompareMainDicomTag('1.2.840.113619.2.176.2025.1499492.7040.1171286242.109', a, '', 'SOPInstanceUID')
102
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3391
104
7530eb50c3c4 renamed HttpPost.lua into HttpClient.lua + fix tests
amazy
parents: 102
diff changeset
3392 def test_httpClient_lua(self):
7530eb50c3c4 renamed HttpPost.lua into HttpClient.lua + fix tests
amazy
parents: 102
diff changeset
3393 with open(GetDatabasePath('Lua/HttpClient.lua'), 'r') as f:
102
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3394 result = DoPost(_REMOTE, '/tools/execute-script', f.read(), 'application/lua')
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3395
9671578fd4d3 added tests for Lua HttpPost/Put/Get/Delete methods
amazy
parents: 100
diff changeset
3396 self.assertIn('OK', result)
107
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3397
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3398
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3399 def test_bitbucket_issue_44(self):
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3400 # https://bitbucket.org/sjodogne/orthanc/issues/44/bad-interpretation-of-photometric
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3401 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3402 UploadInstance(_REMOTE, 'Issue44/Monochrome2.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3403
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3404 # dcmcjpeg +ua +eb Monochrome1.dcm Monochrome1-Jpeg.dcm
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3405 UploadInstance(_REMOTE, 'Issue44/Monochrome1-Jpeg.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3406
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3407 # dcmcjpeg +ua Monochrome1.dcm Monochrome1-JpegLS.dcm
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3408 UploadInstance(_REMOTE, 'Issue44/Monochrome1-JpegLS.dcm')
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3409
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3410 monochrome1 = 'bcdd600a-a6a9c522-5f0a6e84-8657c9f3-b76e59b7'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3411 monochrome1_jpeg = '9df82121-208a2da8-0038674a-3d7a773b-b7008cd2'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3412 monochrome1_jpegls = '0486d1a2-9165573f-b1976b20-e927b016-6b8d67ab'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3413 monochrome2 = 'f00947b7-f61f7164-c93414d1-c6fbda6a-9e92ed20'
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3414
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3415 for i in [ monochrome1, monochrome1_jpeg, monochrome1_jpegls ]:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3416 im = GetImage(_REMOTE, '/instances/%s/preview' % i)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3417 self.assertEqual("L", im.mode)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3418 self.assertEqual(2010, im.size[0])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3419 self.assertEqual(2446, im.size[1])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3420
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3421 # This is the chest image, with MONOCHROME1. Raw background is
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3422 # white (255), should be rendered as black (0) => invert
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3423 if i == monochrome1_jpeg:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3424 # Add some tolerance because of JPEG destructive compression
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3425 self.assertGreater(10, im.getpixel((0,0)))
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3426 else:
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3427 self.assertEqual(0, im.getpixel((0,0)))
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3428
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3429 im = GetImage(_REMOTE, '/instances/%s/preview' % monochrome2)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3430 self.assertEqual("L", im.mode)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3431 self.assertEqual(1572, im.size[0])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3432 self.assertEqual(2010, im.size[1])
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3433
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3434 # This is the key image, with MONOCHROME2. Raw background is
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3435 # white (255), should be rendered as white (255)
fddb35f7289d test_bitbucket_issue_44
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 104
diff changeset
3436 self.assertEqual(255, im.getpixel((0,0)))
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3437
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3438
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3439 def test_bitbucket_issue_42(self):
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3440 # https://bitbucket.org/sjodogne/orthanc/issues/42/fails-to-modify-a-dicom-video-file
123
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 122
diff changeset
3441 # This test fails on DCMTK 3.6.0, but succeeds in DCMTK 3.6.1 snapshots and DCMTK 3.6.2
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3442 UploadInstance(_REMOTE, 'Issue42.dcm')['ID']
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3443 modified = DoPost(_REMOTE,
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3444 '/patients/da128605-e040d0c4-310615d2-3475da63-df2d1ef4/modify',
119
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
3445 '{"Replace":{"PatientID":"Hello","PatientName":"Sample patient name"},"Force":true}',
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3446 'application/json')
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3447 self.assertTrue('PatientID' in modified)
113
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3448
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3449
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3450 def test_rest_find_limit(self):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3451 # Check the "Since" and "Limit" parameters in URI "/tools/find"
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3452 # Related to issue 53: https://bitbucket.org/sjodogne/orthanc/issues/53
111
7005cdeeb704 test_bitbucket_issue_42
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 107
diff changeset
3453
113
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3454 # Upload 6 instances
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3455 brainix = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3456 knee = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3457 for i in range(2):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3458 brainix.append(UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3459 brainix.append(UploadInstance(_REMOTE, 'Brainix/Epi/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3460 knee.append(UploadInstance(_REMOTE, 'Knee/T1/IM-0001-000%d.dcm' % (i + 1)) ['ID'])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3461
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3462 # Check using BRAINIX
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3463 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3464 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3465 'Limit' : 10 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3466 self.assertEqual(4, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3467
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3468 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3469 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3470 'Limit' : 4 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3471 self.assertEqual(4, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3472
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3473 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3474 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3475 'Since' : 2,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3476 'Limit' : 4 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3477 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3478
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3479 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3480 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3481 'Limit' : 3 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3482 self.assertEqual(3, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3483
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3484 b = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3485 for i in range(4):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3486 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3487 'Query' : { 'PatientName' : 'B*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3488 'Limit' : 1,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3489 'Since' : i })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3490 self.assertEqual(1, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3491 b.append(a[0])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3492
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3493 # Check whether the two sets are equal through symmetric difference
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3494 self.assertEqual(0, len(set(b) ^ set(brainix)))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3495
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3496 # Check using KNEE
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3497 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3498 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3499 'Limit' : 10 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3500 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3501
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3502 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3503 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3504 'Limit' : 2 })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3505 self.assertEqual(2, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3506
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3507 b = []
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3508 for i in range(2):
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3509 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Instance',
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3510 'Query' : { 'PatientName' : 'K*' },
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3511 'Limit' : 1,
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3512 'Since' : i })
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3513 self.assertEqual(1, len(a))
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3514 b.append(a[0])
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3515
3e5934363e76 test_rest_find_limitµ
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 112
diff changeset
3516 self.assertEqual(0, len(set(b) ^ set(knee)))
115
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3517
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3518
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3519 def test_bitbucket_issue_46(self):
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3520 # "PHI remaining after anonymization"
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3521 # https://bitbucket.org/sjodogne/orthanc/issues/46
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3522
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3523 def GetAnonymizedTags(study, version):
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3524 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3525 { 'DicomVersion' : version },
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3526 'application/json') ['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3527 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3528 self.assertEqual(1, len(a))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3529
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3530 instance = a[0]['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3531
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3532 return (instance, DoGet(_REMOTE, '/instances/%s/tags' % instance))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3533
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3534 UploadInstance(_REMOTE, 'Issue44/Monochrome1.dcm')
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3535 origStudy = '6068a14b-d4df27af-9ec22145-538772d8-74f228ff'
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3536
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3537 # Add the 0032,1033 (Requesting Service) and the 0010,1060
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3538 # (Patient's Mother's Birth Name) tags
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3539 newStudy = DoPost(_REMOTE, '/studies/%s/modify' % origStudy,
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3540 '{"Replace":{"0010,1060":"OSIMIS","0032,1033":"MOTHER"}}',
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3541 'application/json')['ID']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3542
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3543 # Use Table E.1-1 from PS 3.15-2008
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3544 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3545 (instance, tags) = GetAnonymizedTags(newStudy, "2008")
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3546 self.assertTrue('0032,1033' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3547 self.assertTrue('0010,1060' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3548
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3549 # Use Table E.1-1 from PS 3.15-2011 (only if Orthanc >= 1.2.1)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3550 # https://raw.githubusercontent.com/jodogne/dicom-specification/master/2008/08_15pu.pdf
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3551 (instance, tags) = GetAnonymizedTags(newStudy, "2017c")
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3552 self.assertFalse('0032,1033' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3553 self.assertFalse('0010,1060' in tags)
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3554
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3555 t = {}
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3556 for (key, value) in tags.iteritems():
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3557 t[value['Name']] = value['Value']
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3558
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3559 self.assertEqual('', t['StudyDate']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3560 self.assertEqual('', t['StudyTime']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3561 self.assertEqual('', t['PatientSex']) # Type 1 tag => cleared
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3562 self.assertFalse('SeriesDate' in t) # Type 3 tag => null
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3563 self.assertFalse('SeriesTime' in t) # Type 3 tag => null
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3564
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3565 with tempfile.NamedTemporaryFile(delete = True) as f:
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3566 # Run "dciodvfy" on the anonymized file to be sure it is still valid
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3567 f.write(DoGet(_REMOTE, '/instances/%s/file' % instance))
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3568 f.flush()
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3569 subprocess.check_output([ FindExecutable('dciodvfy'), f.name ],
45ebfab035b7 test_bitbucket_issue_46
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
3570 stderr = subprocess.STDOUT).split('\n')
118
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3571
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3572
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3573 def test_bitbucket_issue_55(self):
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3574 def Run(modify, query):
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3575 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3576
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3577 operation = 'modify' if modify else 'anonymize'
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3578
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3579 self.assertRaises(Exception, lambda: DoPost(
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3580 _REMOTE, '/studies/%s/%s' % (study, operation), query))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3581 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3582
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3583 query["Force"] = True
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3584 a = DoPost(_REMOTE, '/studies/%s/%s' % (study, operation), query)['Path']
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3585 self.assertEqual(2, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3586 DoDelete(_REMOTE, a)
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3587
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3588 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3589
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3590 UploadInstance(_REMOTE, 'DummyCT.dcm')
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3591 study = 'b9c08539-26f93bde-c81ab0d7-bffaf2cb-a4d0bdd0'
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3592
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3593 Run(True, { "Replace" : { "StudyInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3594 Run(True, { "Replace" : { "SeriesInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3595 Run(True, { "Replace" : { "SOPInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3596
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3597 Run(False, { "Keep" : [ "StudyInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3598 Run(False, { "Keep" : [ "SeriesInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3599 Run(False, { "Keep" : [ "SOPInstanceUID" ]})
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3600
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3601 Run(False, { "Replace" : { "StudyInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3602 Run(False, { "Replace" : { "SeriesInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3603 Run(False, { "Replace" : { "SOPInstanceUID" : "world" } })
a954c535fef6 test_bitbucket_issue_55
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 117
diff changeset
3604
120
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3605
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3606 def test_bitbucket_issue_56(self):
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3607 # Case-insensitive matching over accents. This test assumes
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3608 # that the "CaseSensitivePN" configuration option of Orthanc
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3609 # is set to "false" (default value).
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3610 # https://bitbucket.org/sjodogne/orthanc/issues/56
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3611
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3612 def Check(name, expected, expectedSensitive):
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3613 a = CallFindScu([ '-k', '0008,0005=ISO_IR 192', # Use UTF-8
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3614 '-k', '0008,0052=PATIENT',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3615 '-k', 'PatientName=%s' % name ])
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3616 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', a)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3617 self.assertEqual(expected, len(patientNames))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3618
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3619 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3620 'CaseSensitive' : False,
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3621 'Query' : { 'PatientName' : name }})
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3622 self.assertEqual(expected, len(a))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3623
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3624 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Patient',
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3625 'CaseSensitive' : True,
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3626 'Query' : { 'PatientName' : name }})
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3627 self.assertEqual(expectedSensitive, len(a))
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3628
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3629 UploadInstance(_REMOTE, 'Encodings/Lena-latin1.dcm')
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3630
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3631 # WildcardConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3632 Check('TeSt*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3633 Check('TeSt-a*', 0, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3634 Check('TeSt-É*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3635 Check('TeSt-é*', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3636 Check('Test-é*', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3637
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3638 # ListConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3639 Check('Test-éüäöò\\nope', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3640 Check('Test-ÉÜÄÖÒ\\nope', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3641
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3642 # ValueConstraint
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3643 Check('Test-éüäöò', 1, 1)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3644 Check('Test-ÉÜÄÖÒ', 1, 0)
fce08afe6b2d test_bitbucket_issue_56
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
3645
125
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3646
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3647 def test_gbk_alias(self):
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3648 # https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3649 # This test fails on Orthanc <= 1.3.0
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3650 i = UploadInstance(_REMOTE, '2017-09-19-GBK-Tumashu.dcm')['ID']
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3651 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3652 self.assertEqual(tags['PatientName'], u'徐浩凯')
15e4dc0a5810 test_gbk_alias
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 124
diff changeset
3653 self.assertEqual(tags['InstitutionName'], u'灌云县疾病预防控制中心')
126
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3654
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3655
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3656 def test_long_tag(self):
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3657 i = UploadInstance(_REMOTE, 'DummyCTWithLongTag.dcm')['ID']
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3658 series = 'f2635388-f01d497a-15f7c06b-ad7dba06-c4c599fe'
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3659
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3660 tags = DoGet(_REMOTE, '/instances/%s/tags' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3661 self.assertTrue('0018,1020' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3662 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3663 self.assertEqual('TooLong', tags['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3664 self.assertEqual(None, tags['0018,1020']['Value'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3665
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3666 tags = DoGet(_REMOTE, '/instances/%s/tags?ignore-length=0018-1020' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3667 self.assertTrue('0018,1020' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3668 self.assertEqual('SoftwareVersions', tags['0018,1020']['Name'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3669 self.assertEqual('String', tags['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3670 self.assertTrue(tags['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3671
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3672 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3673 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3674 self.assertEqual(None, tags['SoftwareVersions'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3675 self.assertTrue('HeartRate' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3676 self.assertEqual(474, int(tags['HeartRate']))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3677
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3678 tags = DoGet(_REMOTE, '/instances/%s/simplified-tags' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3679 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3680 self.assertEqual(None, tags['SoftwareVersions'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3681
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3682 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=0018-1020' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3683 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3684 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3685
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3686 tags = DoGet(_REMOTE, '/instances/%s/tags?simplify&ignore-length=SoftwareVersions' % i)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3687 self.assertTrue('SoftwareVersions' in tags)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3688 self.assertTrue(tags['SoftwareVersions'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3689
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3690 tags = DoGet(_REMOTE, '/series/%s/instances-tags' % series)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3691 self.assertEqual(1, len(tags))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3692 self.assertTrue(i in tags.keys())
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3693 self.assertTrue('0018,1020' in tags[i])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3694 self.assertEqual('TooLong', tags[i]['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3695
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3696 tags = DoGet(_REMOTE, '/series/%s/instances-tags?ignore-length=SoftwareVersions' % series)
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3697 self.assertEqual(1, len(tags))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3698 self.assertTrue(i in tags.keys())
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3699 self.assertTrue('0018,1020' in tags[i])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3700 self.assertEqual('String', tags[i]['0018,1020']['Type'])
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3701 self.assertTrue(tags[i]['0018,1020']['Value'].startswith('Lorem ipsum dolor sit amet'))
6ead76f08d9c test_long_tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 125
diff changeset
3702
127
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3703
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3704 def test_extended_media(self):
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3705 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3706
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3707 z = GetArchive(_REMOTE, '/patients/%s/media?extended' % DoGet(_REMOTE, '/patients')[0])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3708 self.assertEqual(2, len(z.namelist()))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3709 self.assertTrue('IMAGES/IM0' in z.namelist())
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3710 self.assertTrue('DICOMDIR' in z.namelist())
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3711
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3712 try:
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3713 os.remove('/tmp/DICOMDIR')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3714 except:
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3715 # The file does not exist
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3716 pass
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3717
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3718 z.extract('DICOMDIR', '/tmp')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3719 a = subprocess.check_output([ FindExecutable('dciodvfy'), '/tmp/DICOMDIR' ],
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3720 stderr = subprocess.STDOUT).split('\n')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3721 self.assertEqual(5, len(a))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3722 self.assertTrue(a[0].startswith('Warning'))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3723 self.assertEqual('BasicDirectory', a[1])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3724 self.assertTrue('not present in standard DICOM IOD' in a[2])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3725 self.assertTrue('not present in standard DICOM IOD' in a[3])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3726 self.assertEqual('', a[4])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3727
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3728 a = subprocess.check_output([ FindExecutable('dcentvfy'), '/tmp/DICOMDIR' ],
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3729 stderr = subprocess.STDOUT).split('\n')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3730 self.assertEqual(1, len(a))
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3731 self.assertEqual('', a[0])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3732
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3733 a = subprocess.check_output([ FindExecutable('dcm2xml'), '/tmp/DICOMDIR' ])
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3734 self.assertTrue(re.search('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', a) != None)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3735
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3736 # Check the presence of the series description (extended tag)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3737 self.assertTrue(re.search('T1W_aTSE', a) != None)
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3738
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3739 os.remove('/tmp/DICOMDIR')
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3740
1eea4d3a1ba9 test_extended_media
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 126
diff changeset
3741
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3742 def test_anonymize_relationships_1(self):
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3743 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3744 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0002.dcm')
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3745 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3746
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3747 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3748 '{}',
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3749 'application/json')['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3750
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3751 a = DoGet(_REMOTE, '/studies/%s/instances' % study)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3752 self.assertEqual(2, len(a))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3753 a1 = a[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3754 a2 = a[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3755
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3756 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3757 self.assertEqual(2, len(b))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3758 b1 = b[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3759 b2 = b[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3760
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3761 SEQUENCE = '/instances/%s/content/ReferencedImageSequence'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3762 SOP = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPInstanceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3763 CLASS = '/instances/%s/content/ReferencedImageSequence/%d/ReferencedSOPClassUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3764 FRAME = '/instances/%s/content/FrameOfReferenceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3765
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3766 self.assertEqual(DoGet(_REMOTE, FRAME % a1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3767 DoGet(_REMOTE, FRAME % a2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3768 self.assertEqual(DoGet(_REMOTE, FRAME % b1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3769 DoGet(_REMOTE, FRAME % b2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3770 self.assertNotEqual(DoGet(_REMOTE, FRAME % a1),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3771 DoGet(_REMOTE, FRAME % b1))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3772 self.assertNotEqual(DoGet(_REMOTE, FRAME % a2),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3773 DoGet(_REMOTE, FRAME % b2))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3774
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3775 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3776 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % a2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3777 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3778 self.assertEqual(3, len(DoGet(_REMOTE, SEQUENCE % b2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3779
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3780 for i in range(3):
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3781 self.assertEqual(DoGet(_REMOTE, SOP % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3782 DoGet(_REMOTE, SOP % (a2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3783 self.assertEqual(DoGet(_REMOTE, SOP % (b1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3784 DoGet(_REMOTE, SOP % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3785 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3786 DoGet(_REMOTE, SOP % (b1, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3787 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3788 DoGet(_REMOTE, SOP % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3789 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3790 DoGet(_REMOTE, CLASS % (b1, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3791 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, i)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3792 DoGet(_REMOTE, CLASS % (b2, i)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3793
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3794
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3795 def test_anonymize_relationships_2(self):
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3796 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0001.dcm')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3797 UploadInstance(_REMOTE, 'Comunix/Ct/IM-0001-0002.dcm')
132
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3798 study = '6c65289b-db2fcb71-7eaf73f4-8e12470c-a4d6d7cf'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3799
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3800 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3801 '{}',
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3802 'application/json')['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3803
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3804 a = DoGet(_REMOTE, '/studies/%s/instances' % study)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3805 self.assertEqual(2, len(a))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3806 a1 = a[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3807 a2 = a[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3808
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3809 b = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3810 self.assertEqual(2, len(b))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3811 b1 = b[0]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3812 b2 = b[1]['ID']
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3813
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3814 SEQUENCE = '/instances/%s/content/SourceImageSequence'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3815 SOP = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPInstanceUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3816 CLASS = '/instances/%s/content/SourceImageSequence/%d/ReferencedSOPClassUID'
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3817
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3818 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3819 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % a2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3820 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b1)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3821 self.assertEqual(1, len(DoGet(_REMOTE, SEQUENCE % b2)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3822 self.assertEqual(DoGet(_REMOTE, SOP % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3823 DoGet(_REMOTE, SOP % (a2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3824 self.assertEqual(DoGet(_REMOTE, SOP % (b1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3825 DoGet(_REMOTE, SOP % (b2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3826 self.assertNotEqual(DoGet(_REMOTE, SOP % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3827 DoGet(_REMOTE, SOP % (b1, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3828 self.assertNotEqual(DoGet(_REMOTE, SOP % (a2, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3829 DoGet(_REMOTE, SOP % (b2, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3830 self.assertEqual(DoGet(_REMOTE, CLASS % (a1, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3831 DoGet(_REMOTE, CLASS % (b1, 0)))
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3832 self.assertEqual(DoGet(_REMOTE, CLASS % (a2, 0)),
149144d854bb Orthanc.test_anonymize_relationships_1/2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 130
diff changeset
3833 DoGet(_REMOTE, CLASS % (b2, 0)))
133
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3834
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3835
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3836 def test_anonymize_relationships_3(self):
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3837 sr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM0')['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3838 mr1 = UploadInstance(_REMOTE, 'HierarchicalAnonymization/StructuredReports/IM631')['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3839 study = 'ef351eb2-c1147229-062736b8-35a151e3-e32d526b'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3840
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3841 anonymized = DoPost(_REMOTE, '/studies/%s/anonymize' % study,
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3842 { "Keep" : [ "ContentSequence" ] }) ['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3843
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3844 a = DoGet(_REMOTE, '/studies/%s/instances' % anonymized)
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3845 self.assertEqual(2, len(a))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3846
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3847 if DoGet(_REMOTE, '/instances/%s/content/Modality' % a[0]['ID']) == 'SR':
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3848 sr2 = a[0]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3849 mr2 = a[1]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3850 else:
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3851 sr2 = a[1]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3852 mr2 = a[0]['ID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3853
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3854 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % sr1),
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3855 DoGet(_REMOTE, '/instances/%s/content/Modality' % sr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3856 self.assertEqual(DoGet(_REMOTE, '/instances/%s/content/Modality' % mr1),
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3857 DoGet(_REMOTE, '/instances/%s/content/Modality' % mr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3858
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3859 mrUid1 = DoGet(_REMOTE, '/instances/%s' % mr1)['MainDicomTags']['SOPInstanceUID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3860 mrUid2 = DoGet(_REMOTE, '/instances/%s' % mr2)['MainDicomTags']['SOPInstanceUID']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3861 mrSeries1 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr1).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3862 mrSeries2 = DoGet(_REMOTE, '/instances/%s/content/SeriesInstanceUID' % mr2).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3863 mrStudy1 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr1).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3864 mrStudy2 = DoGet(_REMOTE, '/instances/%s/content/StudyInstanceUID' % mr2).strip('\x00')
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3865
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3866 PATH1 = '/instances/%s/content/CurrentRequestedProcedureEvidenceSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3867 PATH2 = PATH1 + '/0/ReferencedSeriesSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3868 PATH3 = PATH2 + '/0/ReferencedSOPSequence'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3869 PATH4 = PATH3 + '/0/ReferencedSOPInstanceUID'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3870 PATH5 = PATH3 + '/0/ReferencedSOPClassUID'
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3871
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3872 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3873 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3874 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr1)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3875 self.assertEqual(DoGet(_REMOTE, PATH4 % sr1), mrUid1)
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3876 self.assertEqual(mrSeries1, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr1).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3877 self.assertEqual(mrStudy1, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr1).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3878
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3879 self.assertEqual(1, len(DoGet(_REMOTE, PATH1 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3880 self.assertEqual(1, len(DoGet(_REMOTE, PATH2 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3881 self.assertEqual(1, len(DoGet(_REMOTE, PATH3 % sr2)))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3882 self.assertEqual(DoGet(_REMOTE, PATH5 % sr1), DoGet(_REMOTE, PATH5 % sr2))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3883
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3884 self.assertEqual(mrUid2, DoGet(_REMOTE, PATH4 % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3885 self.assertEqual(mrSeries2, DoGet(_REMOTE, (PATH2 + '/0/SeriesInstanceUID') % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3886 self.assertEqual(mrStudy2, DoGet(_REMOTE, (PATH1 + '/0/StudyInstanceUID') % sr2).strip('\x00'))
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3887
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3888 content1 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr1) ['ContentSequence']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3889 content2 = DoGet(_REMOTE, '/instances/%s/tags?simplify' % sr2) ['ContentSequence']
f0d4c4707e64 test_anonymize_relationships_3
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 132
diff changeset
3890 self.assertEqual(str(content1), str(content2))
141
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3891
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3892
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3893 def test_bitbucket_issue_94(self):
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3894 # "a simple instance modification should not modify FrameOfReferenceUID + ..."
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3895 # https://bitbucket.org/sjodogne/orthanc/issues/94
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3896 i = UploadInstance(_REMOTE, 'Issue94.dcm')['ID']
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3897
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3898 source = DoGet(_REMOTE, '/instances/%s/attachments/dicom/data' % i)
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3899
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3900 modified = DoPost(_REMOTE, '/instances/%s/modify' % i,
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3901 { "Replace" : {"PatientID" : "toto"}, "Force": True})
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3902
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3903 anonymized = DoPost(_REMOTE, '/instances/%s/anonymize' % i)
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3904
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3905 a = ExtractDicomTags(source, [ 'FrameOfReferenceUID' ])
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3906 self.assertEqual(1, len(a))
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3907
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3908 b = ExtractDicomTags(modified, [ 'FrameOfReferenceUID' ])
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3909 self.assertEqual(1, len(b))
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3910
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3911 c = ExtractDicomTags(anonymized, [ 'FrameOfReferenceUID' ])
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3912 self.assertEqual(1, len(c))
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3913
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3914 self.assertEqual(a, b) # Modified DICOM
5de178abe4d8 test_bitbucket_issue_94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 138
diff changeset
3915 self.assertNotEqual(a, c) # Anonymized DICOM
143
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3916
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3917
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3918 def test_metadata_origin(self):
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3919 # Upload using the REST API
144
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3920 i = UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')['ID']
143
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3921 self.assertEqual('RestApi', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3922 self.assertEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3923 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3924 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3925 self.assertEqual('alice', DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3926
144
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3927 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i)
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3928 self.assertEqual('RestApi', m['Origin'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3929 self.assertEqual('', m['RemoteAET'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3930 self.assertNotEqual('', m['RemoteIP'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3931 self.assertFalse('CalledAET' in m)
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3932 self.assertEqual('alice', m['HttpUsername'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3933
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3934 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3935 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3936 self.assertEqual('1', m['IndexInSeries'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3937 self.assertTrue('ReceptionDate' in m)
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3938
143
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3939 DoDelete(_REMOTE, '/instances/%s' % i)
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3940
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3941 # Upload using the DICOM protocol
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3942 subprocess.check_call([ FindExecutable('storescu'),
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3943 _REMOTE['Server'], str(_REMOTE['DicomPort']),
144
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3944 GetDatabasePath('Knee/T1/IM-0001-0001.dcm'),
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3945 '-xw' ]) # Propose JPEG2000
143
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3946 self.assertEqual('DicomProtocol', DoGet(_REMOTE, '/instances/%s/metadata/Origin' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3947 self.assertEqual('STORESCU', DoGet(_REMOTE, '/instances/%s/metadata/RemoteAET' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3948 self.assertNotEqual('', DoGet(_REMOTE, '/instances/%s/metadata/RemoteIP' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3949 self.assertEqual('ANY-SCP', DoGet(_REMOTE, '/instances/%s/metadata/CalledAET' % i))
28d50ffac07d test_metadata_origin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 142
diff changeset
3950 self.assertRaises(Exception, lambda: DoGet(_REMOTE, '/instances/%s/metadata/HttpUsername' % i))
144
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3951
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3952 m = DoGet(_REMOTE, '/instances/%s/metadata?expand' % i)
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3953 self.assertEqual('DicomProtocol', m['Origin'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3954 self.assertEqual('STORESCU', m['RemoteAET'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3955 self.assertNotEqual('', m['RemoteIP'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3956 self.assertEqual('ANY-SCP', m['CalledAET'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3957 self.assertFalse('HttpUsername' in m)
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3958
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3959 self.assertEqual('1.2.840.10008.1.2.4.91', m['TransferSyntax'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3960 self.assertEqual('1.2.840.10008.5.1.4.1.1.4', m['SopClassUid'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3961 self.assertEqual('1', m['IndexInSeries'])
7809fdf8056f testing metadata?expand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 143
diff changeset
3962 self.assertTrue('ReceptionDate' in m)
147
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3963
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3964
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3965 def test_lua_deadlock(self):
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3966 # Rana Asim Wajid (2018-07-14): "It does seem that the issue
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3967 # is with the lua script I'm using for conversion of images to
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3968 # JPEG2000. When the script is used with 1.4.0 the first
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3969 # instance appears to be stored and then everything just
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3970 # halts, ie Orthanc wont respond to anything after that."
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3971 # https://groups.google.com/d/msg/orthanc-users/Rc-Beb42xc8/JUgdzrmCAgAJ
174
d468cbe1b161 added tests for IncomingWorklistRequestFilter
am@osimis.io
parents: 173
diff changeset
3972 InstallLuaScriptFromPath(_REMOTE, 'Lua/Jpeg2000Conversion.lua')
147
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3973
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3974 subprocess.check_call([ FindExecutable('storescu'),
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3975 _REMOTE['Server'], str(_REMOTE['DicomPort']),
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3976 GetDatabasePath('Brainix/Flair/IM-0001-0001.dcm'),
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3977 GetDatabasePath('Brainix/Flair/IM-0001-0002.dcm'),
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3978 ])
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3979
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3980 instances = DoGet(_REMOTE, '/instances')
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3981 self.assertEqual(2, len(instances))
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3982
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3983 t1 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[0])
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3984 t2 = DoGet(_REMOTE, '/instances/%s/metadata/TransferSyntax' % instances[1])
175
am@osimis.io
parents: 174
diff changeset
3985 self.assertEqual('1.2.840.10008.1.2.4.90', t1) # this will fail if libgdcm-tools is not installed
147
ff788c99f1aa test_lua_deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 145
diff changeset
3986 self.assertEqual(t1, t2);
154
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3987
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3988
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3989 def test_find_group_length(self):
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3990 # Orthanc <= 1.4.1 fails to answer C-FIND queries that contain
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3991 # one of the Generic Group Length tags (*, 0x0000)
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3992 a = UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3993 result = CallFindScu([ '-k', '0008,0052=STUDY', '-k', '0008,0000=80' ])
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3994 self.assertFalse('UnableToProcess' in result)
4a533d003080 test_find_group_length
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 147
diff changeset
3995 self.assertFalse('E:' in result)
179
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
3996
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
3997
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
3998 def test_split(self):
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
3999 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4000 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4001 study = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4002 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4003 t2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4004
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4005 self.assertEqual(1, len(DoGet(_REMOTE, '/studies')))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4006 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4007
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4008 info = DoGet(_REMOTE, '/studies/%s' % study)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4009 self.assertTrue('ReferringPhysicianName' in info['MainDicomTags'])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4010
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4011 job = MonitorJob2(_REMOTE, lambda: DoPost
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4012 (_REMOTE, '/studies/%s/split' % study, {
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4013 'Series' : [ t2 ],
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4014 'Replace' : { 'PatientName' : 'Hello' },
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4015 'Remove' : [ 'ReferringPhysicianName' ],
181
911070f790e3 more checks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
4016 'KeepSource' : False,
911070f790e3 more checks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
4017 'Asynchronous' : True
179
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4018 }))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4019
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4020 self.assertNotEqual(None, job)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4021
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4022 studies = set(DoGet(_REMOTE, '/studies'))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4023 self.assertEqual(2, len(studies))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4024
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4025 series = set(DoGet(_REMOTE, '/series'))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4026 self.assertEqual(2, len(series))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4027 self.assertTrue(t1 in series)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4028
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4029 study2 = DoGet(_REMOTE, '/jobs/%s' % job)['Content']['TargetStudy']
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4030 self.assertTrue(study in studies)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4031 self.assertTrue(study2 in studies)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4032
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4033 info = DoGet(_REMOTE, '/studies/%s' % study2)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4034 self.assertTrue('Hello', info['PatientMainDicomTags']['PatientName'])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4035 self.assertFalse('ReferringPhysicianName' in info['MainDicomTags'])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4036
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4037
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4038 def test_merge(self):
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4039 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4040 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')['ID']
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4041 knee = '0a9b3153-2512774b-2d9580de-1fc3dcf6-3bd83918'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4042 t1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4043 brainix = '27f7126f-4f66fb14-03f4081b-f9341db2-53925988'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4044 flair = '1e2c125c-411b8e86-3f4fe68e-a7584dd3-c6da78f0'
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4045
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4046 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4047 self.assertEqual(2, len(DoGet(_REMOTE, '/series')))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4048
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4049 job = MonitorJob2(_REMOTE, lambda: DoPost
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4050 (_REMOTE, '/studies/%s/merge' % knee, {
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4051 'Resources' : [ brainix ],
181
911070f790e3 more checks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
4052 'KeepSource' : True,
911070f790e3 more checks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
4053 'Synchronous' : False
179
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4054 }))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4055
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4056 self.assertNotEqual(None, job)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4057
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4058 studies = set(DoGet(_REMOTE, '/studies'))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4059 self.assertEqual(2, len(studies))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4060 self.assertTrue(knee in studies)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4061 self.assertTrue(brainix in studies)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4062
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4063 series = set(DoGet(_REMOTE, '/studies/%s' % knee)['Series'])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4064 self.assertTrue(t1 in series)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4065 series.remove(t1)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4066 self.assertEqual(1, len(series))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4067
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4068 instances = DoGet(_REMOTE, '/series/%s' % list(series)[0])['Instances']
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4069 self.assertEqual(1, len(instances))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4070 merged = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4071
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4072 instances = DoGet(_REMOTE, '/series/%s' % t1)['Instances']
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4073 self.assertEqual(1, len(instances))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4074 a = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4075
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4076 instances = DoGet(_REMOTE, '/series/%s' % flair)['Instances']
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4077 self.assertEqual(1, len(instances))
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4078 b = DoGet(_REMOTE, '/instances/%s/tags?simplify' % instances[0])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4079
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4080 tags = DoGet(_REMOTE, '/studies/%s' % knee)
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4081
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4082 for key in tags['PatientMainDicomTags']:
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4083 self.assertEqual(a[key], merged[key])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4084 if (key in b and key != 'PatientSex'):
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4085 self.assertNotEqual(a[key], b[key])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4086
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4087 for key in tags['MainDicomTags']:
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4088 # Not in the patient/study module
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4089 if (not key in [ 'InstitutionName',
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4090 'RequestingPhysician',
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4091 'RequestedProcedureDescription', ]):
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4092 self.assertEqual(a[key], merged[key])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4093 if (key in b):
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4094 self.assertNotEqual(a[key], b[key])
8a2dd77d4035 testing split/merge
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 177
diff changeset
4095
187
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4096
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4097 def test_async_archive(self):
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4098 # Testing the asynchronous generation of archives/medias (new
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4099 # in Orthanc 1.4.3)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4100 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4101 UploadInstance(_REMOTE, 'Knee/T2/IM-0001-0001.dcm')
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4102
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4103 kneeT1 = '6de73705-c4e65c1b-9d9ea1b5-cabcd8e7-f15e4285'
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4104 kneeT2 = 'bbf7a453-0d34251a-03663b55-46bb31b9-ffd74c59'
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4105
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4106 job = MonitorJob2(_REMOTE, lambda: DoPost
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4107 (_REMOTE, '/studies/%s/archive' % kneeT1, {
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4108 'Synchronous' : False
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4109 }))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4110
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4111 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4112 self.assertEqual(1, len(z.namelist()))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4113 self.assertFalse('DICOMDIR' in z.namelist())
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4114
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4115 job2 = MonitorJob2(_REMOTE, lambda: DoPost
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4116 (_REMOTE, '/studies/%s/media' % kneeT1, {
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4117 'Synchronous' : False
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4118 }))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4119
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4120 # The archive from the first job has been replaced by the
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4121 # archive from second job (as MediaArchiveSize == 1)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4122 self.assertRaises(Exception, lambda: GetArchive(_REMOTE, '/jobs/%s/archive' % job))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4123
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4124 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job2)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4125 self.assertEqual(2, len(z.namelist()))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4126 self.assertTrue('DICOMDIR' in z.namelist())
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4127
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4128 job = MonitorJob2(_REMOTE, lambda: DoPost
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4129 (_REMOTE, '/tools/create-archive', {
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4130 'Synchronous' : False,
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4131 'Resources' : [ kneeT1, kneeT2 ],
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4132 }))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4133
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4134 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4135 self.assertEqual(2, len(z.namelist()))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4136 self.assertFalse('DICOMDIR' in z.namelist())
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4137
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4138 job = MonitorJob2(_REMOTE, lambda: DoPost
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4139 (_REMOTE, '/tools/create-media', {
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4140 'Synchronous' : False,
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4141 'Resources' : [ kneeT1, kneeT2 ],
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4142 }))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4143
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4144 z = GetArchive(_REMOTE, '/jobs/%s/archive' % job)
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4145 self.assertEqual(3, len(z.namelist()))
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4146 self.assertTrue('DICOMDIR' in z.namelist())
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4147
187
770f6f5aea16 test_async_archive
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
4148
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4149 def test_queries_hierarchy(self):
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4150 UploadInstance(_REMOTE, 'Knee/T1/IM-0001-0001.dcm')
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4151 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4152
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4153 tags = {
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4154 'NumberOfPatientRelatedInstances' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4155 'NumberOfPatientRelatedSeries' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4156 'NumberOfPatientRelatedStudies' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4157 'NumberOfStudyRelatedInstances' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4158 'NumberOfStudyRelatedSeries' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4159 'NumberOfSeriesRelatedInstances' : '',
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4160 }
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4161
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4162 tags2 = copy.copy(tags)
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4163 tags2['PatientID'] = '887' # Only consider the "Knee" patient
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4164
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4165 patient = DoPost(_REMOTE, '/modalities/self/query', {
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4166 'Level' : 'Patient',
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4167 'Query' : tags2
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4168 }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4169
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4170 study = DoPost(_REMOTE, '/modalities/self/query', {
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4171 'Level' : 'Study',
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4172 'Query' : tags2
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4173 }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4174
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4175 series = DoPost(_REMOTE, '/modalities/self/query', {
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4176 'Level' : 'Series',
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4177 'Query' : tags2
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4178 }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4179
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4180 instance = DoPost(_REMOTE, '/modalities/self/query', {
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4181 'Level' : 'Instance',
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4182 'Query' : tags2
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4183 }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4184
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4185 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % patient)
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4186 self.assertEqual(1, len(p))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4187 self.assertEqual('887', p[0]['PatientID'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4188 self.assertEqual('1', p[0]['NumberOfPatientRelatedInstances'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4189 self.assertEqual('1', p[0]['NumberOfPatientRelatedSeries'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4190 self.assertEqual('1', p[0]['NumberOfPatientRelatedStudies'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4191 self.assertFalse('NumberOfStudyRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4192 self.assertFalse('NumberOfStudyRelatedSeries' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4193 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4194
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4195 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study)
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4196 self.assertEqual(1, len(p))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4197 self.assertEqual('2.16.840.1.113669.632.20.121711.10000160881', p[0]['StudyInstanceUID'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4198 self.assertEqual('1', p[0]['NumberOfStudyRelatedInstances'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4199 self.assertEqual('1', p[0]['NumberOfStudyRelatedSeries'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4200 self.assertFalse('NumberOfPatientRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4201 self.assertFalse('NumberOfPatientRelatedSeries' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4202 self.assertFalse('NumberOfPatientRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4203 self.assertFalse('NumberOfSeriesRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4204
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4205 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series)
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4206 self.assertEqual(1, len(p))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4207 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908564160709', p[0]['SeriesInstanceUID'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4208 self.assertEqual('1', p[0]['NumberOfSeriesRelatedInstances'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4209 self.assertFalse('NumberOfPatientRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4210 self.assertFalse('NumberOfPatientRelatedSeries' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4211 self.assertFalse('NumberOfPatientRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4212 self.assertFalse('NumberOfStudyRelatedInstances' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4213 self.assertFalse('NumberOfStudyRelatedSeries' in p[0])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4214
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4215 p = DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance)
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4216 self.assertEqual(1, len(p))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4217 self.assertEqual('1.3.46.670589.11.17521.5.0.3124.2008081908590448738', p[0]['SOPInstanceUID'])
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4218
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4219 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-studies' % patient,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4220 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4221 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4222 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % study))
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4223
188
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4224 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % patient,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4225 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4226 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4227 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4228
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4229 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % patient,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4230 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4231 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4232 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4233
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4234 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-series' % study,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4235 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4236 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4237 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % series))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4238
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4239 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % study,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4240 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4241 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4242 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4243
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4244 j = DoPost(_REMOTE, '/queries/%s/answers/0/query-instances' % series,
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4245 { 'Query' : tags }) ['ID']
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4246 self.assertEqual(DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % j),
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4247 DoGet(_REMOTE, '/queries/%s/answers?expand&simplify' % instance))
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4248
7d585263808b new test: test_queries_hierarchy
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 187
diff changeset
4249
189
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4250 def test_dicom_disk_size(self):
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4251 dicomSize = 0
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4252
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4253 UploadInstance(_REMOTE, 'Brainix/Flair/IM-0001-0001.dcm')
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4254
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4255 for i in range(2):
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4256 p = 'Knee/T%d/IM-0001-0001.dcm' % (i + 1)
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4257 UploadInstance(_REMOTE, p)
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4258 dicomSize += os.path.getsize(GetDatabasePath(p))
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4259
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4260 s = DoGet(_REMOTE, '/patients/ca29faea-b6a0e17f-067743a1-8b778011-a48b2a17/statistics') # Consider Knee patient
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4261 self.assertEqual(2, s['CountInstances'])
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4262 self.assertEqual(2, s['CountSeries'])
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4263 self.assertEqual(1, s['CountStudies'])
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4264 self.assertEqual(dicomSize, int(s['DicomDiskSize']))
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4265 self.assertEqual(dicomSize, int(s['DicomUncompressedSize']))
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4266 self.assertLess(dicomSize, int(s['UncompressedSize']))
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4267 self.assertEqual(s['UncompressedSize'], s['DiskSize'])
11719f19bd62 test_dicom_disk_size
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 188
diff changeset
4268
202
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4269
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4270 def test_changes_2(self):
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4271 # More consistent behavior since Orthanc 1.5.2
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4272 # https://groups.google.com/d/msg/orthanc-users/QhzB6vxYeZ0/YxabgqpfBAAJ
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4273
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4274 # Make sure that this is not the first change
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4275 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4276 a = UploadInstance(_REMOTE, 'DummyCT.dcm')['ID']
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4277 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4278 DoDelete(_REMOTE, '/instances/%s' % a)
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4279
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4280 # No more instance, but there were previous changes
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4281 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4282
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4283 c = DoGet(_REMOTE, '/changes')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4284 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4285 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4286 seq = c['Last']
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4287
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4288 c = DoGet(_REMOTE, '/changes?last')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4289 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4290 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4291 self.assertEqual(seq, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4292
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4293 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4294 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4295 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4296 self.assertEqual(seq, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4297
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4298 # Add one instance
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4299 UploadInstance(_REMOTE, 'DummyCT.dcm')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4300 self.assertEqual(1, len(DoGet(_REMOTE, '/instances')))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4301
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4302 c = DoGet(_REMOTE, '/changes')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4303 self.assertEqual(4, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4304 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4305 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4306
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4307 c = DoGet(_REMOTE, '/changes?last')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4308 self.assertEqual(1, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4309 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4310 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4311
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4312 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4313 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4314 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4315 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4316
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4317 # Remove the uploaded instance
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4318 DoDelete(_REMOTE, '/instances/%s' % a)
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4319 self.assertEqual(0, len(DoGet(_REMOTE, '/instances')))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4320
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4321 c = DoGet(_REMOTE, '/changes')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4322 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4323 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4324 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4325
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4326 c = DoGet(_REMOTE, '/changes?last')
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4327 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4328 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4329 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4330
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4331 c = DoGet(_REMOTE, '/changes?since=%d' % (seq + 1000))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4332 self.assertEqual(0, len(c['Changes']))
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4333 self.assertTrue(c['Done'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4334 self.assertEqual(seq + 4, c['Last'])
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4335
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4336
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4337 def test_bitbucket_issue_124(self):
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4338 a = UploadInstance(_REMOTE, 'Issue124.dcm')['ID']
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4339
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4340 z = GetArchive(_REMOTE, '/patients/%s/media' % a)
f26f9ae9c599 test_changes_2 and test_bitbucket_issue_124
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 195
diff changeset
4341 self.assertEqual(2, len(z.namelist()))
207
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4342
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4343
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4344 def test_invalid_findscp(self):
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4345 UploadInstance(_REMOTE, 'DummyCT.dcm')
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4346 findscu = CallFindScu([ '-S', '-k', '8,52=IMAGE', '-k', '8,16', '-k', '2,2' ])
a515eec74078 test_invalid_findscp
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
4347 self.assertEqual(0, len(re.findall('\(0002,0002\)', findscu)))
208
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4348
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4349
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4350 def test_bitbucket_issue_90(self):
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4351 def CountDicomResults(sex):
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4352 a = CallFindScu([ '-S', '-k', '8,52=STUDY', '-k', sex ])
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4353 return len(re.findall('\(0010,0040\)', a))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4354
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4355 def CountRestResults(sex):
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4356 a = DoPost(_REMOTE, '/tools/find',
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4357 { 'Level' : 'Study', 'Query' : { 'PatientSex' : sex } })
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4358 return len(a)
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4359
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4360 # Just like the "CR000000.dcm" of the issue, the test image
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4361 # "DummyCT.dcm" has the tag PatientSex (0010,0040) unset
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4362 UploadInstance(_REMOTE, 'DummyCT.dcm')
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4363
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4364 # Test that the behavior of DICOM vs. REST API is consistent on missing tags
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4365
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4366 # In wildcard constraints, the patient sex must be set for a match to occur
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4367 self.assertEqual(0, CountDicomResults('PatientSex=*'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4368 self.assertEqual(0, CountRestResults('*'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4369
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4370 # In single-valued constraints, the patient sex must be set
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4371 self.assertEqual(0, CountDicomResults('PatientSex=F'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4372 self.assertEqual(0, CountDicomResults('PatientSex=M'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4373 self.assertEqual(0, CountRestResults('F'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4374 self.assertEqual(0, CountRestResults('M'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4375
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4376 # Empty constraints are only used to ask the actual value of
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4377 # the tag to be added to the *answer*. The tag should not used
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4378 # as a filter in such a situation.
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4379 self.assertEqual(1, CountDicomResults('PatientSex'))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4380 self.assertEqual(1, CountDicomResults('PatientSex='))
2444c9a7c422 test_bitbucket_issue_90
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 207
diff changeset
4381 self.assertEqual(1, CountRestResults('')) # This check fails on Orthanc <= 1.5.2 (issue 90)
210
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4382
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4383
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4384 def test_rest_modalities_in_study(self):
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4385 # Tests a regression that is present in Orthanc 1.5.2 and 1.5.3
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4386 # https://groups.google.com/d/msg/orthanc-users/7lZyG3wpx-M/uOXzAzVCFwAJ
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4387 UploadInstance(_REMOTE, 'ColorTestImageJ.dcm')
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4388
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4389 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4390 'Query' : { 'ModalitiesInStudy' : 'US' }})
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4391 self.assertEqual(0, len(a))
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4392
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4393 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4394 'Query' : { 'ModalitiesInStudy' : 'US\\CT' }})
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4395 self.assertEqual(1, len(a))
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4396
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4397 a = DoPost(_REMOTE, '/tools/find', { 'Level' : 'Study',
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4398 'Query' : { 'ModalitiesInStudy' : 'CT' }})
2c50c8f340c2 test_rest_modalities_in_study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 208
diff changeset
4399 self.assertEqual(1, len(a))
211
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4400
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4401
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4402 def test_series_status(self):
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4403 def HasCompletedInChanges():
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4404 for c in DoGet(_REMOTE, '/changes?limit=1000&since=0')['Changes']:
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4405 if c['ChangeType'] == 'CompletedSeries':
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4406 return True;
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4407
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4408 return False
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4409
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4410 UploadInstance(_REMOTE, 'Knix/Loc/IM-0001-0001.dcm')
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4411 series = '8ea120d7-5057d919-837dfbcc-ccd04e0f-7f3a94aa'
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4412 self.assertEqual('Unknown', DoGet(_REMOTE, '/series/%s' % series)['Status'])
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4413 self.assertFalse(HasCompletedInChanges())
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4414
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4415 series = 'ce25ecb6-ed79d004-5ae43ca7-3fc89bc5-67511614'
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4416
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4417 for i in range(3):
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4418 UploadInstance(_REMOTE, 'Series/Lena-%d.dcm' % (i + 1))
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4419 self.assertEqual('Missing', DoGet(_REMOTE, '/series/%s' % series)['Status'])
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4420 self.assertFalse(HasCompletedInChanges())
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4421
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4422 UploadInstance(_REMOTE, 'Series/Lena-4.dcm')
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4423 self.assertEqual('Complete', DoGet(_REMOTE, '/series/%s' % series)['Status'])
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4424 self.assertTrue(HasCompletedInChanges())
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4425
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4426 DoDelete(_REMOTE, '/changes')
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4427 self.assertFalse(HasCompletedInChanges())
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4428
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4429 UploadInstance(_REMOTE, 'Series/Lena-5.dcm')
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4430 self.assertEqual('Inconsistent', DoGet(_REMOTE, '/series/%s' % series)['Status'])
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4431 self.assertFalse(HasCompletedInChanges())
a05cc24f84e5 test_series_status
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
4432
215
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4433
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4434 def test_dicomweb(self):
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4435 def Compare(dicom, reference):
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4436 a = UploadInstance(_REMOTE, dicom) ['ID']
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4437 b = DoGet(_REMOTE, '/instances/%s/file' % a,
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4438 headers = { 'Accept' : 'application/dicom+json' })
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4439 with open(GetDatabasePath(reference), 'rb') as c:
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4440 d = json.load(c)
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4441 self.assertEqual(d, b)
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4442
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4443 Compare('DummyCT.dcm', 'DummyCT.json')
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4444 Compare('MarekLatin2.dcm', 'MarekLatin2.json')
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4445 Compare('HierarchicalAnonymization/StructuredReports/IM0',
d8fc62207ba3 test_dicomweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
4446 'HierarchicalAnonymization/StructuredReports/IM0.json')
217
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4447
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4448
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4449 def test_issue_95_encodings(self):
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4450 # https://bitbucket.org/sjodogne/orthanc/issues/95/server-cant-support-chinese
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4451 # Check out image: "../Database/Encodings/DavidClunie/charsettests.screenshot.png"
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4452
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4453 # Very useful tool: "file2" from package "file-kanji"
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4454
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4455 def GetPatientName(dicom):
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4456 i = UploadInstance(_REMOTE, dicom) ['ID']
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4457 j = DoGet(_REMOTE, '/instances/%s/tags?simplify' % i)
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4458 return j['PatientName']
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4459
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4460 def ComparePatientName(name, dicom):
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4461 self.assertEqual(name, GetPatientName(dicom))
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4462
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4463 # gdcmraw -t 10,10 -i SCSFREN -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4464 ComparePatientName(u'Buc^Jérôme', 'Encodings/DavidClunie/SCSFREN')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4465
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4466 # gdcmraw -t 10,10 -i SCSI2 -o /tmp/tag && uconv -f KOREAN -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4467 ComparePatientName(u'Hong^Gildong=洪^吉洞=홍^길동', 'Encodings/DavidClunie/SCSI2') # Since Orthanc 1.5.5
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4468
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4469 # gdcmraw -t 10,10 -i SCSX2 -o /tmp/tag && uconv -f GB18030 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4470 ComparePatientName(u'Wang^XiaoDong=王^小东=', 'Encodings/DavidClunie/SCSX2')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4471
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4472 # gdcmraw -t 10,10 -i SCSX1 -o /tmp/tag && cat /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4473 ComparePatientName(u'Wang^XiaoDong=王^小東=', 'Encodings/DavidClunie/SCSX1')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4474
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4475 # gdcmraw -t 10,10 -i SCSH31 -o /tmp/tag && uconv -f JIS -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4476 ComparePatientName(u'Yamada^Tarou=山田^太郎=やまだ^たろう', 'Encodings/DavidClunie/SCSH31')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4477
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4478 # gdcmraw -t 10,10 -i SCSGERM -o /tmp/tag && uconv -f ISO-IR-100 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4479 ComparePatientName(u'Äneas^Rüdiger', 'Encodings/DavidClunie/SCSGERM')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4480
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4481 # gdcmraw -t 10,10 -i SCSGREEK -o /tmp/tag && uconv -f ISO-IR-126 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4482 ComparePatientName(u'Διονυσιος', 'Encodings/DavidClunie/SCSGREEK')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4483
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4484 # gdcmraw -t 10,10 -i SCSRUSS -o /tmp/tag && uconv -f ISO-IR-144 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4485 ComparePatientName(u'Люкceмбypг', 'Encodings/DavidClunie/SCSRUSS')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4486
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4487 # gdcmraw -t 10,10 -i SCSHBRW -o /tmp/tag && uconv -f ISO-IR-138 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4488 # NB: Hebrew is a right-to-left encoding, copying/pasting from
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4489 # Linux console into Emacs automatically reverse the string
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4490 ComparePatientName(u'שרון^דבורה', 'Encodings/DavidClunie/SCSHBRW')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4491
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4492 # gdcmraw -t 10,10 -i SCSARAB -o /tmp/tag && uconv -f ISO-IR-127 -t UTF-8 /tmp/tag && echo
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4493 # NB: Right-to-left as for Hebrew (SCSHBRW), and the Ubuntu console can't display such
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4494 # characters by default, but copy/paste works with Emacs
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4495 ComparePatientName(u'قباني^لنزار', 'Encodings/DavidClunie/SCSARAB')
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4496
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4497 # SCSH32: This SpecificCharacterSet is composed of 2
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4498 # codepages: "ISO 2022 IR 13" (i.e. "SHIFT_JIS") until the
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4499 # first equal, then "ISO 2022 IR 87" (i.e. "JIS") for the
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4500 # remainer. Orthanc only takes into consideration the first
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4501 # codepage: This is a limitation.
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4502 # gdcmraw -t 10,10 -i SCSH32 -o /tmp/tag && cut -d '=' -f 1 /tmp/tag | uconv -f SHIFT_JIS -t UTF-8
a491d5ec370a test encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
4503 self.assertTrue(GetPatientName('Encodings/DavidClunie/SCSH32').startswith(u'ヤマダ^タロウ='))
218
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4504
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4505
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4506 def test_findscu_missing_tags(self):
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4507 # dcmodify -e Rows DummyCTInvalidRows.dcm -gst -gse -gin
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4508 UploadInstance(_REMOTE, 'DummyCT.dcm')
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4509 UploadInstance(_REMOTE, 'DummyCTInvalidRows.dcm')
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4510
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4511 i = CallFindScu([ '-k', '0008,0052=IMAGES', '-k', 'Rows', '-k', 'PatientName' ])
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4512
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4513 # We have 2 instances...
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4514 patientNames = re.findall('\(0010,0010\).*?\[(.*?)\]', i)
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4515 self.assertEqual(2, len(patientNames))
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4516 self.assertEqual('KNIX', patientNames[0])
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4517 self.assertEqual('KNIX', patientNames[1])
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4518
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4519 # ...but only 1 value for the "Rows" tag
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4520 rows = re.findall('\(0028,0010\) US ([0-9]+)', i)
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4521 self.assertEqual(1, len(rows))
70fba41776be test_findscu_missing_tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
4522 self.assertEqual('512', rows[0])
219
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4523
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4524
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4525
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4526 def test_bitbucket_issue_131(self):
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4527 # "Orthanc PACS silently fails to C-MOVE due to duplicate
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4528 # StudyInstanceUID in it's database."
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4529 # https://bitbucket.org/sjodogne/orthanc/issues/131/orthanc-pacs-silently-fails-to-c-move-due
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4530
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4531 # Insert 2 instances, with the same StudyInstanceUID, but with
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4532 # different patient IDs. Orthanc will create 2 distincts
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4533 # patients, and the hierarchy of resources above the two
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4534 # instances will be fully disjoint.
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4535 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-a.dcm')
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4536 UploadInstance(_REMOTE, 'PatientIdsCollision/Issue131-b.dcm')
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4537
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4538 self.assertEqual(2, len(DoGet(_REMOTE, '/patients')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4539 self.assertEqual(2, len(DoGet(_REMOTE, '/studies')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4540
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4541 a = DoPost(_REMOTE, '/modalities/self/query', {
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4542 'Level' : 'Study',
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4543 'Query' : {"PatientID": "A" }})['ID']
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4544
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4545 # 1 study is matched
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4546 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4547
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4548 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4549 self.assertTrue(MonitorJob(_REMOTE, lambda: DoPost
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4550 (_REMOTE, '/queries/%s/retrieve' % a,
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4551 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4552
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4553 # The two studies are matched, as we made the request at the
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4554 # Study level, thus the shared StudyInstanceUID is used as the key
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4555 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4556
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4557
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4558 # Match the 2 studies
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4559 a = DoPost(_REMOTE, '/modalities/self/query', {
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4560 'Level' : 'Study',
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4561 'Query' : {"StudyInstanceUID": "2.25.123" }})['ID']
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4562 self.assertEqual(2, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4563 DropOrthanc(_LOCAL)
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4564 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4565 self.assertTrue(MonitorJob(_REMOTE, lambda: DoPost
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4566 (_REMOTE, '/queries/%s/retrieve' % a,
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4567 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4568 self.assertEqual(2, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4569
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4570
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4571 # Same test, at the patient level => only 1 instance is transfered
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4572 a = DoPost(_REMOTE, '/modalities/self/query', {
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4573 'Level' : 'Patient',
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4574 'Query' : {"PatientID": "A" }})['ID']
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4575 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4576 DropOrthanc(_LOCAL)
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4577 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4578 self.assertTrue(MonitorJob(_REMOTE, lambda: DoPost
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4579 (_REMOTE, '/queries/%s/retrieve' % a,
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4580 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4581 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4582
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4583
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4584 # Same test, at the series level => only 1 instance is transfered
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4585 a = DoPost(_REMOTE, '/modalities/self/query', {
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4586 'Level' : 'Series',
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4587 'Query' : {"PatientID": "A" }})['ID']
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4588 self.assertEqual(1, len(DoGet(_REMOTE, '/queries/%s/answers' % a)))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4589 DropOrthanc(_LOCAL)
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4590 self.assertEqual(0, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4591 self.assertTrue(MonitorJob(_REMOTE, lambda: DoPost
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4592 (_REMOTE, '/queries/%s/retrieve' % a,
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4593 '{"TargetAet":"ORTHANCTEST","Synchronous":false}')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4594 self.assertEqual(1, len(DoGet(_LOCAL, '/instances')))
00e5aeea33dd test_bitbucket_issue_131
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
4595