Mercurial > hg > orthanc-tcia
view Plugin/CsvParser.cpp @ 20:acedf6311c81 OrthancTcia-1.1
OrthancTcia-1.1
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 14 Dec 2021 14:19:20 +0100 |
parents | 2464bacb730b |
children | b6801cfb19d2 |
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/** * TCIA plugin for Orthanc * Copyright (C) 2021 Sebastien Jodogne, UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "CsvParser.h" #include <OrthancException.h> #include <cassert> #include <csv.h> static int IsSpace(unsigned char c) { return (c == CSV_SPACE || c == CSV_TAB) ? 1 : 0; } static int IsEndOfLine(unsigned char c) { return (c == CSV_CR || c == CSV_LF) ? 1 : 0; } namespace OrthancPlugins { void CsvParser::OnCell(void *content, size_t size, void *payload) { CsvParser& that = *reinterpret_cast<CsvParser*>(payload); std::string s(reinterpret_cast<const char*>(content), size); that.cells_.push_back(s); } void CsvParser::OnNextRow(int c, void *payload) { CsvParser& that = *reinterpret_cast<CsvParser*>(payload); that.startOfRowIndex_.push_back(that.cells_.size()); } void CsvParser::Parse(const std::string& csv) { cells_.clear(); startOfRowIndex_.clear(); startOfRowIndex_.push_back(0); if (!csv.empty()) { struct csv_parser p; if (csv_init(&p, 0) != 0) { throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError, "Failed to initialize CSV parser"); } csv_set_space_func(&p, IsSpace); csv_set_term_func(&p, IsEndOfLine); bool ok = (csv_parse(&p, csv.c_str(), csv.size(), OnCell, OnNextRow, this) == csv.size() && csv_fini(&p, OnCell, OnNextRow, this) == 0); csv_free(&p); if (!ok) { throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "Cannot parse CSV"); } } } size_t CsvParser::GetRowsCount() const { assert(startOfRowIndex_.size() > 0); return (startOfRowIndex_.size() - 1); } size_t CsvParser::GetColumnsCount(size_t row) const { if (row >= GetRowsCount()) { throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); } else { assert(row + 1 < startOfRowIndex_.size()); return (startOfRowIndex_[row + 1] - startOfRowIndex_[row]); } } const std::string& CsvParser::GetCell(size_t row, size_t column) const { if (column >= GetColumnsCount(row)) { throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); } else { return cells_[startOfRowIndex_[row] + column]; } } void CsvParser::GetHeaderIndex(std::map<std::string, size_t>& index) const { index.clear(); if (GetRowsCount() > 0) { const size_t n = GetColumnsCount(0); assert(cells_.size() >= n); for (size_t i = 0; i < n; i++) { const std::string& s = cells_[i]; if (index.find(s) != index.end()) { throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "The header row is not a valid index"); } else { index[s] = i; } } } } }