Mercurial > hg > orthanc-stone
view OrthancStone/Sources/Toolbox/SortedFrames.h @ 1926:8efcff08f868
added reference paper
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 23 Mar 2022 19:01:43 +0100 |
parents | 7053b8a0aaec |
children | 07964689cb0b |
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/** * Stone of Orthanc * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2022 Osimis S.A., Belgium * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Lesser General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with this program. If not, see * <http://www.gnu.org/licenses/>. **/ #pragma once #include "CoordinateSystem3D.h" #include "DicomInstanceParameters.h" #include "LinearAlgebra.h" namespace OrthancStone { class SortedFrames : public boost::noncopyable { #if defined(FRIEND_TEST) // We're compiling the unit tests FRIEND_TEST(SortedFrames, Basic); FRIEND_TEST(SortedFrames, SortSopInstanceUid); FRIEND_TEST(SortedFrames, SortInstanceNumber); FRIEND_TEST(SortedFrames, SortInstanceNumberAndImageIndex); #endif private: struct Frame { private: const DicomInstanceParameters* instance_; unsigned int frameNumber_; public: Frame(const DicomInstanceParameters& instance, unsigned int frameNumber); const DicomInstanceParameters& GetInstance() const { return *instance_; } unsigned int GetFrameNumberInInstance() const { return frameNumber_; } double ComputeDistance(const Vector& p) const; }; // Maps "SOPInstanceUID" to an index in "instances_" typedef std::map<std::string, size_t> InstancesIndex; // Maps pair "(SOPInstanceUID, FrameNumber)" to an index in // "frames_" (only once "Sort()" is called) typedef std::map<std::pair<std::string, unsigned int>, size_t> FramesIndex; std::string studyInstanceUid_; std::string seriesInstanceUid_; std::vector<DicomInstanceParameters*> instances_; std::vector<Frame> frames_; bool sorted_; InstancesIndex instancesIndex_; FramesIndex framesIndex_; const DicomInstanceParameters& GetInstance(size_t instanceIndex) const; bool LookupSopInstanceUid(size_t& instanceIndex, const std::string& sopInstanceUid) const; const Frame& GetFrame(size_t frameIndex) const; void AddFramesOfInstance(std::set<size_t>& remainingInstances, size_t instanceIndex); void SortUsingIntegerTag(std::set<size_t>& remainingInstances, const Orthanc::DicomTag& tag); void SortUsingSopInstanceUid(std::set<size_t>& remainingInstances); void SortUsing3DLocation(std::set<size_t>& remainingInstances); public: SortedFrames() : sorted_(true) { } ~SortedFrames() { Clear(); } void Clear(); const std::string& GetStudyInstanceUid() const { return studyInstanceUid_; } const std::string& GetSeriesInstanceUid() const { return seriesInstanceUid_; } void AddInstance(const Orthanc::DicomMap& tags); size_t GetInstancesCount() const { return instances_.size(); } bool IsSorted() const { return sorted_; } size_t GetFramesCount() const; const DicomInstanceParameters& GetInstanceOfFrame(size_t frameIndex) const { return GetFrame(frameIndex).GetInstance(); } unsigned int GetFrameNumberInInstance(size_t frameIndex) const { return GetFrame(frameIndex).GetFrameNumberInInstance(); } CoordinateSystem3D GetFrameGeometry(size_t frameIndex) const; bool LookupFrame(size_t& frameIndex, const std::string& sopInstanceUid, unsigned int frameNumber) const; void Sort(); bool FindClosestFrame(size_t& frameIndex, const Vector& point, double maximumDistance) const; }; }