view Framework/Radiography/RadiographyDicomLayer.cpp @ 700:059e1fd05fd6 refactor-viewport-controller

Introduced the ViewportController that sits between the application and the Scene2D to handle the trackers and measuring tools. This is a work in progress. The Scene2D is no longer an observable. Message sending is managed by the ViewportController. Move some refs to shared and weak to prevent lifetime issues.
author Benjamin Golinvaux <bgo@osimis.io>
date Sun, 19 May 2019 16:26:17 +0200
parents 1e26bb5f2a02
children d2c0e347ddc2
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/**
 * Stone of Orthanc
 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
 * Department, University Hospital of Liege, Belgium
 * Copyright (C) 2017-2018 Osimis S.A., Belgium
 *
 * This program is free software: you can redistribute it and/or
 * modify it under the terms of the GNU Affero General Public License
 * as published by the Free Software Foundation, either version 3 of
 * the License, or (at your option) any later version.
 *
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 * Affero General Public License for more details.
 *
 * You should have received a copy of the GNU Affero General Public License
 * along with this program. If not, see <http://www.gnu.org/licenses/>.
 **/


#include "RadiographyDicomLayer.h"

#include "RadiographyScene.h"
#include "../Toolbox/DicomFrameConverter.h"

#include <Core/OrthancException.h>
#include <Core/Images/Image.h>
#include <Core/Images/ImageProcessing.h>
#include <Plugins/Samples/Common/DicomDatasetReader.h>

static OrthancPlugins::DicomTag  ConvertTag(const Orthanc::DicomTag& tag)
{
  return OrthancPlugins::DicomTag(tag.GetGroup(), tag.GetElement());
}

namespace OrthancStone
{

  void RadiographyDicomLayer::ApplyConverter()
  {
    if (source_.get() != NULL &&
        converter_.get() != NULL)
    {
      converted_.reset(converter_->ConvertFrame(*source_));
    }
  }


  RadiographyDicomLayer::RadiographyDicomLayer(MessageBroker& broker, const RadiographyScene& scene) : RadiographyLayer(broker, scene)
  {

  }

  void RadiographyDicomLayer::SetDicomTags(const OrthancPlugins::FullOrthancDataset& dataset)
  {
    converter_.reset(new DicomFrameConverter);
    converter_->ReadParameters(dataset);
    ApplyConverter();

    std::string tmp;
    Vector pixelSpacing;

    if (dataset.GetStringValue(tmp, ConvertTag(Orthanc::DICOM_TAG_PIXEL_SPACING)) &&
        LinearAlgebra::ParseVector(pixelSpacing, tmp) &&
        pixelSpacing.size() == 2)
    {
      SetPixelSpacing(pixelSpacing[0], pixelSpacing[1]);
    }

    OrthancPlugins::DicomDatasetReader reader(dataset);

    unsigned int width, height;
    if (!reader.GetUnsignedIntegerValue(width, ConvertTag(Orthanc::DICOM_TAG_COLUMNS)) ||
        !reader.GetUnsignedIntegerValue(height, ConvertTag(Orthanc::DICOM_TAG_ROWS)))
    {
      throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat);
    }
    else
    {
      SetSize(width, height);
    }

    if (dataset.GetStringValue(tmp, ConvertTag(Orthanc::DICOM_TAG_PHOTOMETRIC_INTERPRETATION)))
    {
      if (tmp == "MONOCHROME1")
      {
        SetPreferredPhotomotricDisplayMode(PhotometricDisplayMode_Monochrome1);
      }
      else if (tmp == "MONOCHROME2")
      {
        SetPreferredPhotomotricDisplayMode(PhotometricDisplayMode_Monochrome2);
      }
    }
  }

  void RadiographyDicomLayer::SetSourceImage(Orthanc::ImageAccessor* image)   // Takes ownership
  {
    std::auto_ptr<Orthanc::ImageAccessor> raii(image);

    if (image == NULL)
    {
      throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer);
    }

    SetSize(image->GetWidth(), image->GetHeight());

    source_ = raii;
    ApplyConverter();

    BroadcastMessage(RadiographyLayer::LayerEditedMessage(*this));
  }


  void RadiographyDicomLayer::SetDicomFrameConverter(DicomFrameConverter* converter)
  {
    converter_.reset(converter);
  }

  void RadiographyDicomLayer::Render(Orthanc::ImageAccessor& buffer,
                                     const AffineTransform2D& viewTransform,
                                     ImageInterpolation interpolation) const
  {
    if (converted_.get() != NULL)
    {
      if (converted_->GetFormat() != Orthanc::PixelFormat_Float32)
      {
        throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
      }

      unsigned int cropX, cropY, cropWidth, cropHeight;
      GetCrop(cropX, cropY, cropWidth, cropHeight);

      AffineTransform2D t = AffineTransform2D::Combine(
            viewTransform, GetTransform(),
            AffineTransform2D::CreateOffset(cropX, cropY));

      Orthanc::ImageAccessor cropped;
      converted_->GetRegion(cropped, cropX, cropY, cropWidth, cropHeight);

      t.Apply(buffer, cropped, interpolation, false);
    }
  }


  bool RadiographyDicomLayer::GetDefaultWindowing(float& center,
                                                  float& width) const
  {
    if (converter_.get() != NULL &&
        converter_->HasDefaultWindow())
    {
      center = static_cast<float>(converter_->GetDefaultWindowCenter());
      width = static_cast<float>(converter_->GetDefaultWindowWidth());
      return true;
    }
    else
    {
      return false;
    }
  }


  bool RadiographyDicomLayer::GetRange(float& minValue,
                                       float& maxValue) const
  {
    if (converted_.get() != NULL)
    {
      if (converted_->GetFormat() != Orthanc::PixelFormat_Float32)
      {
        throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
      }

      Orthanc::ImageProcessing::GetMinMaxFloatValue(minValue, maxValue, *converted_);
      return true;
    }
    else
    {
      return false;
    }
  }

}