diff Framework/Toolbox/LinearAlgebra.h @ 158:a053ca7fa5c6 wasm

LinearAlgebra toolbox
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 14 Feb 2018 08:58:31 +0100
parents
children 0a73d76333db
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Framework/Toolbox/LinearAlgebra.h	Wed Feb 14 08:58:31 2018 +0100
@@ -0,0 +1,96 @@
+/**
+ * Stone of Orthanc
+ * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
+ * Department, University Hospital of Liege, Belgium
+ * Copyright (C) 2017-2018 Osimis S.A., Belgium
+ *
+ * This program is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU Affero General Public License
+ * as published by the Free Software Foundation, either version 3 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ * Affero General Public License for more details.
+ * 
+ * You should have received a copy of the GNU Affero General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ **/
+
+
+#pragma once
+
+// Patch for ublas in Boost 1.64.0
+// https://github.com/dealii/dealii/issues/4302
+#include <boost/version.hpp>
+#if BOOST_VERSION >= 106300  // or 64, need to check
+#  include <boost/serialization/array_wrapper.hpp>
+#endif
+
+#include <Core/DicomFormat/DicomMap.h>
+
+#include <boost/numeric/ublas/matrix.hpp>
+#include <boost/numeric/ublas/vector.hpp>
+
+namespace OrthancStone
+{
+  typedef boost::numeric::ublas::matrix<double>   Matrix;
+  typedef boost::numeric::ublas::vector<double>   Vector;
+
+  namespace LinearAlgebra
+  {
+    void Print(const Vector& v);
+
+    void Print(const Matrix& m);
+
+    bool ParseVector(Vector& target,
+                     const std::string& s);
+
+    bool ParseVector(Vector& target,
+                     const Orthanc::DicomMap& dataset,
+                     const Orthanc::DicomTag& tag);
+
+    void AssignVector(Vector& v,
+                      double v1,
+                      double v2);
+
+    void AssignVector(Vector& v,
+                      double v1,
+                      double v2,
+                      double v3);
+
+    inline bool IsNear(double x,
+                       double y,
+                       double threshold)
+    {
+      return fabs(x - y) < threshold;
+    }
+
+    bool IsNear(double x,
+                double y);
+
+    inline bool IsCloseToZero(double x)
+    {
+      return IsNear(x, 0.0);
+    }
+
+    void NormalizeVector(Vector& u);
+
+    void CrossProduct(Vector& result,
+                      const Vector& u,
+                      const Vector& v);
+    
+    void FillMatrix(Matrix& target,
+                    size_t rows,
+                    size_t columns,
+                    const double values[]);
+
+    void FillVector(Vector& target,
+                    size_t size,
+                    const double values[]);
+
+    void Convert(Matrix& target,
+                 const Vector& source);
+  };
+}