diff OrthancStone/Sources/Volumes/DicomVolumeImageMPRSlicer.cpp @ 1512:244ad1e4e76a

reorganization of folders
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 07 Jul 2020 16:21:02 +0200
parents Framework/Volumes/DicomVolumeImageMPRSlicer.cpp@30deba7bc8e2
children 4fb8fdf03314
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line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/OrthancStone/Sources/Volumes/DicomVolumeImageMPRSlicer.cpp	Tue Jul 07 16:21:02 2020 +0200
@@ -0,0 +1,133 @@
+/**
+ * Stone of Orthanc
+ * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
+ * Department, University Hospital of Liege, Belgium
+ * Copyright (C) 2017-2020 Osimis S.A., Belgium
+ *
+ * This program is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU Affero General Public License
+ * as published by the Free Software Foundation, either version 3 of
+ * the License, or (at your option) any later version.
+ *
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+ * Affero General Public License for more details.
+ * 
+ * You should have received a copy of the GNU Affero General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ **/
+
+
+#include "DicomVolumeImageMPRSlicer.h"
+
+#include "../StoneException.h"
+
+#include "../Toolbox/ImageToolbox.h"
+
+#include <OrthancException.h>
+//#include <Images/PngWriter.h>
+#include <Images/JpegWriter.h>
+
+namespace OrthancStone
+{
+  void DicomVolumeImageMPRSlicer::Slice::CheckValid() const
+  {
+    if (!valid_)
+    {
+      LOG(ERROR) << "DicomVolumeImageMPRSlicer::Slice::CheckValid(): (!valid_)";
+      throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
+    }
+  }
+
+
+  DicomVolumeImageMPRSlicer::Slice::Slice(const DicomVolumeImage& volume,
+                                          const CoordinateSystem3D& cuttingPlane) :
+    volume_(volume),
+    revision_(volume_.GetRevision())
+  {
+    valid_ = (volume_.HasDicomParameters() &&
+              volume_.GetGeometry().DetectSlice(projection_, sliceIndex_, cuttingPlane));
+  }
+
+
+  VolumeProjection DicomVolumeImageMPRSlicer::Slice::GetProjection() const
+  {
+    CheckValid();
+    return projection_;
+  }
+
+
+  unsigned int DicomVolumeImageMPRSlicer::Slice::GetSliceIndex() const
+  {
+    CheckValid();
+    return sliceIndex_;
+  }
+  
+
+  ISceneLayer* DicomVolumeImageMPRSlicer::Slice::CreateSceneLayer(const ILayerStyleConfigurator* configurator,
+                                                                  const CoordinateSystem3D& cuttingPlane)
+  {
+    CheckValid();
+
+    if (configurator == NULL)
+    {
+      throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer,
+                                      "A style configurator is mandatory for textures");
+    }
+
+    std::unique_ptr<TextureBaseSceneLayer> texture;
+      
+    {
+      const DicomInstanceParameters& parameters = volume_.GetDicomParameters();
+      ImageBuffer3D::SliceReader reader(volume_.GetPixelData(), projection_, sliceIndex_);
+
+      texture.reset(dynamic_cast<TextureBaseSceneLayer*>
+                    (configurator->CreateTextureFromDicom(reader.GetAccessor(), parameters)));
+    }
+    
+    const CoordinateSystem3D& system = volume_.GetGeometry().GetProjectionGeometry(projection_);
+      
+    double x0, y0, x1, y1;
+    cuttingPlane.ProjectPoint(x0, y0, system.GetOrigin());
+    cuttingPlane.ProjectPoint(x1, y1, system.GetOrigin() + system.GetAxisX());
+
+    {
+      double xz, yz;
+      cuttingPlane.ProjectPoint(xz, yz, LinearAlgebra::CreateVector(0, 0, 0));
+      texture->SetOrigin(x0 - xz, y0 - yz);
+    }
+
+    double dx = x1 - x0;
+    double dy = y1 - y0;
+    if (!LinearAlgebra::IsCloseToZero(dx) ||
+        !LinearAlgebra::IsCloseToZero(dy))
+    {
+      texture->SetAngle(atan2(dy, dx));
+    }
+
+    Vector tmp = volume_.GetGeometry().GetVoxelDimensions(projection_);
+    texture->SetPixelSpacing(tmp[0], tmp[1]);
+
+    return texture.release();
+  }
+
+
+  DicomVolumeImageMPRSlicer::~DicomVolumeImageMPRSlicer()
+  {
+    LOG(TRACE) << "DicomVolumeImageMPRSlicer::~DicomVolumeImageMPRSlicer()";
+  }
+
+  IVolumeSlicer::IExtractedSlice*
+  DicomVolumeImageMPRSlicer::ExtractSlice(const CoordinateSystem3D& cuttingPlane)
+  {
+    if (volume_->HasGeometry())
+    {
+      return new Slice(*volume_, cuttingPlane);
+    }
+    else
+    {
+      return new IVolumeSlicer::InvalidSlice;
+    }
+  }
+}