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comparison UnitTestsSources/SortedFramesCreateTest.py @ 1477:5732edec7cbd

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sorting frames in 3D
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 18 Jun 2020 15:48:59 +0200
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1476:4db187d29731 1477:5732edec7cbd
1 #!/usr/bin/env python
2
3 import pprint
4 import requests
5 import sys
6
7 if len(sys.argv) != 2:
8 print('Usage: %s [Orthanc series ID]' % sys.argv[0])
9 print('Example: %s 4d04593b-953ced51-87e93f11-ae4cf03c-25defdcd | xclip -selection c -t text/plain' % sys.argv[0])
10 exit(-1)
11
12 SERIES = sys.argv[1]
13
14 r = requests.get('http://localhost:8042/series/%s/study' % SERIES)
15 r.raise_for_status()
16 print(' // From patient %s' % r.json() ['PatientMainDicomTags']['PatientName'])
17
18 r = requests.get('http://localhost:8042/series/%s' % SERIES)
19 r.raise_for_status()
20
21 first = True
22
23 for instance in r.json() ['Instances']:
24 tags = requests.get('http://localhost:8042/instances/%s/tags?short' % instance)
25 tags.raise_for_status()
26
27 if first:
28 print('''
29 Orthanc::DicomMap tags;
30 tags.SetValue(Orthanc::DICOM_TAG_STUDY_INSTANCE_UID, "%s", false);
31 tags.SetValue(Orthanc::DICOM_TAG_SERIES_INSTANCE_UID, "%s", false);
32 OrthancStone::SortedFrames f;
33 ''' % (tags.json() ['0020,000d'], tags.json() ['0020,000e']))
34 first = False
35
36 print(' tags.SetValue(Orthanc::DICOM_TAG_SOP_INSTANCE_UID, "%s", false);' % instance)
37
38 if '0020,0032' in tags.json():
39 print(' tags.SetValue(Orthanc::DICOM_TAG_IMAGE_POSITION_PATIENT, "%s", false);' %
40 tags.json() ['0020,0032'].replace('\\', '\\\\'))
41
42 if '0020,0037' in tags.json():
43 print(' tags.SetValue(Orthanc::DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "%s", false);' %
44 tags.json() ['0020,0037'].replace('\\', '\\\\'))
45
46 if '0020,0013' in tags.json():
47 print(' tags.SetValue(Orthanc::DICOM_TAG_INSTANCE_NUMBER, "%s", false);' %
48 tags.json() ['0020,0013'].replace('\\', '\\\\'))
49
50 if '0054,1330' in tags.json():
51 print(' tags.SetValue(Orthanc::DICOM_TAG_IMAGE_INDEX, "%s", false);' %
52 tags.json() ['0054,1330'].replace('\\', '\\\\'))
53
54 print(' f.AddInstance(tags);')
55
56 print(' f.Sort();')
57
58 r = requests.get('http://localhost:8042/series/%s/ordered-slices' % SERIES)
59 r.raise_for_status()
60 slices = r.json() ['SlicesShort']
61
62 print(' ASSERT_EQ(%du, f.GetFramesCount());' % len(slices))
63
64 for i in range(len(slices)):
65 print(' ASSERT_EQ(f.GetFrameSopInstanceUid(%d), "%s");' % (i, slices[i][0]))
66