Mercurial > hg > orthanc-stone
annotate Framework/Toolbox/DicomInstanceParameters.h @ 988:4c9b4c4de814 toa2019090901
Fixed bug in DicomStructureSet that prevented points from being added to polygons
author | Benjamin Golinvaux <bgo@osimis.io> |
---|---|
date | Mon, 09 Sep 2019 16:15:28 +0200 |
parents | 8e497a4e3d96 |
children | 78a516d5ead5 |
rev | line source |
---|---|
746 | 1 /** |
2 * Stone of Orthanc | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium | |
6 * | |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU Affero General Public License | |
9 * as published by the Free Software Foundation, either version 3 of | |
10 * the License, or (at your option) any later version. | |
11 * | |
12 * This program is distributed in the hope that it will be useful, but | |
13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
15 * Affero General Public License for more details. | |
16 * | |
17 * You should have received a copy of the GNU Affero General Public License | |
18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
19 **/ | |
20 | |
21 | |
22 #pragma once | |
23 | |
24 #include "../StoneEnumerations.h" | |
768
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
25 #include "../Scene2D/LookupTableTextureSceneLayer.h" |
746 | 26 #include "../Toolbox/CoordinateSystem3D.h" |
27 | |
28 #include <Core/IDynamicObject.h> | |
29 #include <Core/DicomFormat/DicomImageInformation.h> | |
30 | |
31 namespace OrthancStone | |
32 { | |
33 class DicomInstanceParameters : | |
34 public Orthanc::IDynamicObject /* to be used as a payload to SlicesSorter */ | |
35 { | |
36 // This class supersedes the deprecated "DicomFrameConverter" | |
37 | |
38 private: | |
39 struct Data // Struct to ease the copy constructor | |
40 { | |
41 std::string orthancInstanceId_; | |
42 std::string studyInstanceUid_; | |
43 std::string seriesInstanceUid_; | |
44 std::string sopInstanceUid_; | |
45 Orthanc::DicomImageInformation imageInformation_; | |
46 SopClassUid sopClassUid_; | |
47 double thickness_; | |
48 double pixelSpacingX_; | |
49 double pixelSpacingY_; | |
50 CoordinateSystem3D geometry_; | |
51 Vector frameOffsets_; | |
52 bool isColor_; | |
53 bool hasRescale_; | |
54 double rescaleIntercept_; | |
55 double rescaleSlope_; | |
56 bool hasDefaultWindowing_; | |
57 float defaultWindowingCenter_; | |
58 float defaultWindowingWidth_; | |
59 Orthanc::PixelFormat expectedPixelFormat_; | |
980
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
60 bool hasIndexInSeries_; |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
61 unsigned int indexInSeries_; |
746 | 62 |
63 void ComputeDoseOffsets(const Orthanc::DicomMap& dicom); | |
64 | |
65 Data(const Orthanc::DicomMap& dicom); | |
66 | |
67 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const; | |
68 | |
69 bool IsPlaneWithinSlice(unsigned int frame, | |
70 const CoordinateSystem3D& plane) const; | |
71 | |
72 void ApplyRescale(Orthanc::ImageAccessor& image, | |
73 bool useDouble) const; | |
74 }; | |
75 | |
76 | |
768
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
77 Orthanc::ImageAccessor* ConvertToFloat(const Orthanc::ImageAccessor& pixelData) const; |
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
78 |
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
79 |
746 | 80 Data data_; |
81 | |
82 | |
83 public: | |
84 DicomInstanceParameters(const DicomInstanceParameters& other) : | |
85 data_(other.data_) | |
86 { | |
87 } | |
88 | |
89 DicomInstanceParameters(const Orthanc::DicomMap& dicom) : | |
90 data_(dicom) | |
91 { | |
92 } | |
93 | |
782
b24c208fa953
VolumeImageReslicer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
768
diff
changeset
|
94 DicomInstanceParameters* Clone() const |
b24c208fa953
VolumeImageReslicer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
768
diff
changeset
|
95 { |
b24c208fa953
VolumeImageReslicer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
768
diff
changeset
|
96 return new DicomInstanceParameters(*this); |
b24c208fa953
VolumeImageReslicer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
768
diff
changeset
|
97 } |
b24c208fa953
VolumeImageReslicer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
768
diff
changeset
|
98 |
746 | 99 void SetOrthancInstanceIdentifier(const std::string& id) |
100 { | |
101 data_.orthancInstanceId_ = id; | |
102 } | |
103 | |
104 const std::string& GetOrthancInstanceIdentifier() const | |
105 { | |
106 return data_.orthancInstanceId_; | |
107 } | |
108 | |
109 const Orthanc::DicomImageInformation& GetImageInformation() const | |
110 { | |
111 return data_.imageInformation_; | |
112 } | |
113 | |
114 const std::string& GetStudyInstanceUid() const | |
115 { | |
116 return data_.studyInstanceUid_; | |
117 } | |
118 | |
119 const std::string& GetSeriesInstanceUid() const | |
120 { | |
121 return data_.seriesInstanceUid_; | |
122 } | |
123 | |
124 const std::string& GetSopInstanceUid() const | |
125 { | |
126 return data_.sopInstanceUid_; | |
127 } | |
128 | |
129 SopClassUid GetSopClassUid() const | |
130 { | |
131 return data_.sopClassUid_; | |
132 } | |
133 | |
134 double GetThickness() const | |
135 { | |
136 return data_.thickness_; | |
137 } | |
138 | |
139 double GetPixelSpacingX() const | |
140 { | |
141 return data_.pixelSpacingX_; | |
142 } | |
143 | |
144 double GetPixelSpacingY() const | |
145 { | |
146 return data_.pixelSpacingY_; | |
147 } | |
148 | |
149 const CoordinateSystem3D& GetGeometry() const | |
150 { | |
151 return data_.geometry_; | |
152 } | |
153 | |
154 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const | |
155 { | |
156 return data_.GetFrameGeometry(frame); | |
157 } | |
158 | |
159 bool IsPlaneWithinSlice(unsigned int frame, | |
160 const CoordinateSystem3D& plane) const | |
161 { | |
162 return data_.IsPlaneWithinSlice(frame, plane); | |
163 } | |
164 | |
165 bool IsColor() const | |
166 { | |
167 return data_.isColor_; | |
168 } | |
169 | |
170 bool HasRescale() const | |
171 { | |
172 return data_.hasRescale_; | |
173 } | |
174 | |
175 double GetRescaleIntercept() const; | |
176 | |
177 double GetRescaleSlope() const; | |
178 | |
179 bool HasDefaultWindowing() const | |
180 { | |
181 return data_.hasDefaultWindowing_; | |
182 } | |
183 | |
184 float GetDefaultWindowingCenter() const; | |
185 | |
186 float GetDefaultWindowingWidth() const; | |
187 | |
188 Orthanc::PixelFormat GetExpectedPixelFormat() const | |
189 { | |
190 return data_.expectedPixelFormat_; | |
191 } | |
192 | |
193 TextureBaseSceneLayer* CreateTexture(const Orthanc::ImageAccessor& pixelData) const; | |
768
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
194 |
55411e7da2f7
LookupTableTextureSceneLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
746
diff
changeset
|
195 LookupTableTextureSceneLayer* CreateLookupTableTexture(const Orthanc::ImageAccessor& pixelData) const; |
980
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
196 |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
197 bool HasIndexInSeries() const |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
198 { |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
199 return data_.hasIndexInSeries_; |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
200 } |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
201 |
8e497a4e3d96
DicomInstanceParameters::GetIndexInSeries()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
782
diff
changeset
|
202 unsigned int GetIndexInSeries() const; |
746 | 203 }; |
204 } |