Mercurial > hg > orthanc-stone
annotate RenderingPlugin/Sources/Plugin.cpp @ 1889:fe4befc9c2b0
rendering of rt-struct in plugin
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Tue, 18 Jan 2022 17:52:43 +0100 |
parents | 9bdce2c91620 |
children | 6ce81914f7e4 |
rev | line source |
---|---|
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
1 /** |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
2 * Stone of Orthanc |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
4 * Department, University Hospital of Liege, Belgium |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
7 * |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
8 * This program is free software: you can redistribute it and/or |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
9 * modify it under the terms of the GNU General Public License as |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
10 * published by the Free Software Foundation, either version 3 of the |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
11 * License, or (at your option) any later version. |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
12 * |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
13 * This program is distributed in the hope that it will be useful, but |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
16 * General Public License for more details. |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
17 * |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
18 * You should have received a copy of the GNU General Public License |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
19 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
20 **/ |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
21 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
22 |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
23 #include "OrthancPluginConnection.h" |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
24 #include "../Resources/Orthanc/Plugins/OrthancPluginCppWrapper.h" |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
25 |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
26 #include "../../OrthancStone/Sources/Toolbox/AffineTransform2D.h" |
1883
fba6e550e0ee
apply rescale slope/intercept in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1882
diff
changeset
|
27 #include "../../OrthancStone/Sources/Toolbox/DicomInstanceParameters.h" |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
28 #include "../../OrthancStone/Sources/Toolbox/DicomStructureSet.h" |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
29 |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
30 #include <EmbeddedResources.h> |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
31 |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
32 #include <Images/Image.h> |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
33 #include <Images/ImageProcessing.h> |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
34 #include <Images/PngWriter.h> |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
35 #include <Images/NumpyWriter.h> |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
36 #include <Logging.h> |
1884
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
37 #include <SerializationToolbox.h> |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
38 #include <Toolbox.h> |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
39 |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
40 #include <boost/math/constants/constants.hpp> |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
41 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
42 |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
43 class DicomStructureCache : public boost::noncopyable |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
44 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
45 private: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
46 boost::mutex mutex_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
47 std::string instanceId_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
48 std::unique_ptr<OrthancStone::DicomStructureSet> rtstruct_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
49 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
50 DicomStructureCache() // Singleton design pattern |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
51 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
52 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
53 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
54 public: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
55 void Invalidate(const std::string& instanceId) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
56 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
57 boost::mutex::scoped_lock lock(mutex_); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
58 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
59 if (instanceId_ == instanceId) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
60 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
61 rtstruct_.reset(NULL); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
62 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
63 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
64 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
65 static DicomStructureCache& GetSingleton() |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
66 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
67 static DicomStructureCache instance; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
68 return instance; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
69 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
70 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
71 class Accessor : public boost::noncopyable |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
72 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
73 private: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
74 boost::mutex::scoped_lock lock_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
75 std::string instanceId_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
76 const OrthancStone::DicomStructureSet* rtstruct_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
77 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
78 public: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
79 Accessor(DicomStructureCache& that, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
80 const std::string& instanceId) : |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
81 lock_(that.mutex_), |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
82 instanceId_(instanceId), |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
83 rtstruct_(NULL) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
84 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
85 if (that.instanceId_ == instanceId && |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
86 that.rtstruct_.get() != NULL) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
87 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
88 rtstruct_ = that.rtstruct_.get(); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
89 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
90 else |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
91 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
92 try |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
93 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
94 OrthancStone::OrthancPluginConnection connection; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
95 OrthancStone::FullOrthancDataset dataset(connection, "/instances/" + instanceId + "/tags?ignore-length=3006-0050"); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
96 that.rtstruct_.reset(new OrthancStone::DicomStructureSet(dataset)); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
97 that.instanceId_ = instanceId; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
98 rtstruct_ = that.rtstruct_.get(); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
99 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
100 catch (Orthanc::OrthancException&) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
101 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
102 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
103 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
104 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
105 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
106 const std::string& GetInstanceId() const |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
107 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
108 return instanceId_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
109 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
110 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
111 bool IsValid() const |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
112 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
113 return rtstruct_ != NULL; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
114 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
115 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
116 const OrthancStone::DicomStructureSet& GetRtStruct() const |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
117 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
118 if (IsValid()) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
119 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
120 return *rtstruct_; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
121 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
122 else |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
123 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
124 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
125 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
126 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
127 }; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
128 }; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
129 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
130 |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
131 static Orthanc::PixelFormat Convert(OrthancPluginPixelFormat format) |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
132 { |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
133 switch (format) |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
134 { |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
135 case OrthancPluginPixelFormat_RGB24: |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
136 return Orthanc::PixelFormat_RGB24; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
137 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
138 case OrthancPluginPixelFormat_Grayscale8: |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
139 return Orthanc::PixelFormat_Grayscale8; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
140 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
141 case OrthancPluginPixelFormat_Grayscale16: |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
142 return Orthanc::PixelFormat_Grayscale16; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
143 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
144 case OrthancPluginPixelFormat_SignedGrayscale16: |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
145 return Orthanc::PixelFormat_SignedGrayscale16; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
146 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
147 default: |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
148 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
149 } |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
150 } |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
151 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
152 |
1884
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
153 static bool ParseBoolean(const std::string& key, |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
154 const std::string& value) |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
155 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
156 bool result; |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
157 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
158 if (Orthanc::SerializationToolbox::ParseBoolean(result, value)) |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
159 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
160 return result; |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
161 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
162 else |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
163 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
164 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange, |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
165 "Bad value for " + key + ": " + value); |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
166 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
167 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
168 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
169 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
170 static double ParseDouble(const std::string& key, |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
171 const std::string& value) |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
172 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
173 double result; |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
174 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
175 if (Orthanc::SerializationToolbox::ParseDouble(result, value)) |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
176 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
177 return result; |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
178 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
179 else |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
180 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
181 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange, |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
182 "Bad value for " + key + ": " + value); |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
183 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
184 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
185 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
186 |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
187 static unsigned int ParseUnsignedInteger(const std::string& key, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
188 const std::string& value) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
189 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
190 uint32_t result; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
191 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
192 if (Orthanc::SerializationToolbox::ParseUnsignedInteger32(result, value)) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
193 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
194 return result; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
195 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
196 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
197 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
198 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
199 "Bad value for " + key + ": " + value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
200 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
201 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
202 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
203 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
204 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
205 class DataAugmentationParameters : public boost::noncopyable |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
206 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
207 private: |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
208 double angleRadians_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
209 double scaling_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
210 double offsetX_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
211 double offsetY_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
212 bool flipX_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
213 bool flipY_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
214 bool hasResize_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
215 unsigned int targetWidth_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
216 unsigned int targetHeight_; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
217 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
218 void ApplyInternal(Orthanc::ImageAccessor& target, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
219 const Orthanc::ImageAccessor& source) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
220 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
221 if (source.GetWidth() == 0 || |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
222 source.GetHeight() == 0) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
223 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
224 Orthanc::ImageProcessing::Set(target, 0); // Clear the image |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
225 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
226 else if (target.GetWidth() == 0 || |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
227 target.GetHeight() == 0) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
228 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
229 // Nothing to do |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
230 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
231 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
232 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
233 OrthancStone::AffineTransform2D transform = ComputeTransform(source.GetWidth(), source.GetHeight()); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
234 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
235 OrthancStone::ImageInterpolation interpolation; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
236 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
237 if (source.GetFormat() == Orthanc::PixelFormat_RGB24) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
238 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
239 LOG(WARNING) << "Bilinear interpolation for color images is not implemented yet"; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
240 interpolation = OrthancStone::ImageInterpolation_Nearest; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
241 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
242 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
243 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
244 interpolation = OrthancStone::ImageInterpolation_Bilinear; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
245 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
246 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
247 transform.Apply(target, source, interpolation, true /* clear */); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
248 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
249 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
250 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
251 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
252 Orthanc::ImageAccessor* ApplyUnchecked(const Orthanc::ImageAccessor& source) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
253 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
254 std::unique_ptr<Orthanc::ImageAccessor> target; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
255 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
256 if (hasResize_) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
257 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
258 target.reset(new Orthanc::Image(source.GetFormat(), targetWidth_, targetHeight_, false)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
259 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
260 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
261 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
262 target.reset(new Orthanc::Image(source.GetFormat(), source.GetWidth(), source.GetHeight(), false)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
263 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
264 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
265 ApplyInternal(*target, source); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
266 return target.release(); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
267 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
268 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
269 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
270 public: |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
271 DataAugmentationParameters() |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
272 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
273 Clear(); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
274 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
275 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
276 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
277 void Clear() |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
278 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
279 angleRadians_ = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
280 scaling_ = 1; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
281 offsetX_ = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
282 offsetY_ = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
283 flipX_ = false; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
284 flipY_ = false; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
285 hasResize_ = false; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
286 targetWidth_ = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
287 targetHeight_ = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
288 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
289 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
290 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
291 OrthancStone::AffineTransform2D ComputeTransform(unsigned int sourceWidth, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
292 unsigned int sourceHeight) const |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
293 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
294 unsigned int w = (hasResize_ ? targetWidth_ : sourceWidth); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
295 unsigned int h = (hasResize_ ? targetHeight_ : sourceHeight); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
296 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
297 if (w == 0 || |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
298 h == 0 || |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
299 sourceWidth == 0 || |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
300 sourceHeight == 0) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
301 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
302 // Division by zero |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
303 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
304 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
305 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
306 double r = std::min(static_cast<double>(w) / static_cast<double>(sourceWidth), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
307 static_cast<double>(h) / static_cast<double>(sourceHeight)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
308 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
309 OrthancStone::AffineTransform2D resize = OrthancStone::AffineTransform2D::Combine( |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
310 OrthancStone::AffineTransform2D::CreateOffset(static_cast<double>(w) / 2.0, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
311 static_cast<double>(h) / 2.0), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
312 OrthancStone::AffineTransform2D::CreateScaling(r, r)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
313 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
314 OrthancStone::AffineTransform2D dataAugmentation = OrthancStone::AffineTransform2D::Combine( |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
315 OrthancStone::AffineTransform2D::CreateScaling(scaling_, scaling_), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
316 OrthancStone::AffineTransform2D::CreateOffset(offsetX_, offsetY_), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
317 OrthancStone::AffineTransform2D::CreateRotation(angleRadians_), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
318 OrthancStone::AffineTransform2D::CreateOffset(-static_cast<double>(sourceWidth) / 2.0, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
319 -static_cast<double>(sourceHeight) / 2.0), |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
320 OrthancStone::AffineTransform2D::CreateFlip(flipX_, flipY_, sourceWidth, sourceHeight)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
321 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
322 return OrthancStone::AffineTransform2D::Combine(resize, dataAugmentation); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
323 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
324 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
325 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
326 bool ParseParameter(const std::string& key, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
327 const std::string& value) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
328 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
329 if (key == "angle") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
330 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
331 double angle = ParseDouble(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
332 angleRadians_ = angle / 180.0 * boost::math::constants::pi<double>(); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
333 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
334 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
335 else if (key == "scaling") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
336 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
337 scaling_ = ParseDouble(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
338 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
339 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
340 else if (key == "offset-x") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
341 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
342 offsetX_ = ParseDouble(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
343 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
344 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
345 else if (key == "offset-y") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
346 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
347 offsetY_ = ParseDouble(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
348 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
349 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
350 else if (key == "flip-x") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
351 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
352 flipX_ = ParseBoolean(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
353 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
354 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
355 else if (key == "flip-y") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
356 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
357 flipY_ = ParseBoolean(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
358 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
359 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
360 else if (key == "resize") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
361 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
362 std::vector<std::string> tokens; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
363 Orthanc::Toolbox::TokenizeString(tokens, value, ','); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
364 if (tokens.size() != 2) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
365 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
366 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
367 "Must provide two integers separated by commas in " + key + ": " + value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
368 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
369 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
370 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
371 targetWidth_ = ParseUnsignedInteger(key, tokens[0]); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
372 targetHeight_ = ParseUnsignedInteger(key, tokens[1]); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
373 hasResize_ = true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
374 return true; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
375 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
376 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
377 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
378 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
379 return false; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
380 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
381 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
382 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
383 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
384 Orthanc::ImageAccessor* Apply(const Orthanc::ImageAccessor& source) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
385 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
386 if (source.GetFormat() != Orthanc::PixelFormat_RGB24 && |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
387 source.GetFormat() != Orthanc::PixelFormat_Float32) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
388 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
389 throw Orthanc::OrthancException(Orthanc::ErrorCode_IncompatibleImageFormat); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
390 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
391 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
392 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
393 return ApplyUnchecked(source); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
394 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
395 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
396 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
397 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
398 Orthanc::ImageAccessor* ApplyBinaryMask(const Orthanc::ImageAccessor& source) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
399 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
400 if (source.GetFormat() != Orthanc::PixelFormat_Grayscale8) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
401 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
402 throw Orthanc::OrthancException(Orthanc::ErrorCode_IncompatibleImageFormat, |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
403 "A segmentation mask should be a grayscale image"); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
404 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
405 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
406 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
407 std::unique_ptr<Orthanc::ImageAccessor> target(ApplyUnchecked(source)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
408 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
409 const unsigned int h = target->GetHeight(); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
410 const unsigned int w = target->GetWidth(); |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
411 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
412 // Apply thresholding to get back a binary image |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
413 for (unsigned int y = 0; y < h; y++) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
414 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
415 uint8_t* p = reinterpret_cast<uint8_t*>(target->GetRow(y)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
416 for (unsigned int x = 0; x < w; x++, p++) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
417 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
418 if (*p < 128) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
419 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
420 *p = 0; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
421 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
422 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
423 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
424 *p = 255; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
425 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
426 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
427 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
428 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
429 return target.release(); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
430 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
431 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
432 }; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
433 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
434 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
435 static OrthancStone::DicomInstanceParameters* GetInstanceParameters(const std::string& orthancId) |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
436 { |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
437 OrthancPlugins::MemoryBuffer tags; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
438 if (!tags.RestApiGet("/instances/" + orthancId + "/tags", false)) |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
439 { |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
440 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentItem); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
441 } |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
442 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
443 Json::Value json; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
444 tags.ToJson(json); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
445 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
446 Orthanc::DicomMap m; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
447 m.FromDicomAsJson(json); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
448 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
449 return new OrthancStone::DicomInstanceParameters(m); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
450 } |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
451 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
452 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
453 static void AnswerNumpyImage(OrthancPluginRestOutput* output, |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
454 const Orthanc::ImageAccessor& image, |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
455 bool compress) |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
456 { |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
457 std::string answer; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
458 Orthanc::NumpyWriter writer; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
459 writer.SetCompressed(compress); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
460 Orthanc::IImageWriter::WriteToMemory(writer, answer, image); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
461 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
462 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
463 answer.c_str(), answer.size(), "application/octet-stream"); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
464 } |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
465 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
466 |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
467 static void RenderNumpyFrame(OrthancPluginRestOutput* output, |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
468 const char* url, |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
469 const OrthancPluginHttpRequest* request) |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
470 { |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
471 DataAugmentationParameters dataAugmentation; |
1884
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
472 bool compress = false; |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
473 |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
474 for (uint32_t i = 0; i < request->getCount; i++) |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
475 { |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
476 std::string key(request->getKeys[i]); |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
477 std::string value(request->getValues[i]); |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
478 |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
479 if (!dataAugmentation.ParseParameter(key, value)) |
1884
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
480 { |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
481 if (key == "compress") |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
482 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
483 compress = ParseBoolean(key, value); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
484 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
485 else |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
486 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
487 LOG(WARNING) << "Unsupported option for data augmentation: " << key; |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
488 } |
1884
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
489 } |
0c6923982fdd
rendering options from GET args
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1883
diff
changeset
|
490 } |
1883
fba6e550e0ee
apply rescale slope/intercept in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1882
diff
changeset
|
491 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
492 std::unique_ptr<OrthancStone::DicomInstanceParameters> parameters(GetInstanceParameters(request->groups[0])); |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
493 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
494 OrthancPlugins::MemoryBuffer dicom; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
495 dicom.GetDicomInstance(request->groups[0]); |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
496 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
497 unsigned int frame = boost::lexical_cast<unsigned int>(request->groups[1]); |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
498 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
499 OrthancPlugins::OrthancImage image; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
500 image.DecodeDicomImage(dicom.GetData(), dicom.GetSize(), frame); |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
501 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
502 Orthanc::ImageAccessor source; |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
503 source.AssignReadOnly(Convert(image.GetPixelFormat()), image.GetWidth(), image.GetHeight(), |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
504 image.GetPitch(), image.GetBuffer()); |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
505 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
506 std::unique_ptr<Orthanc::ImageAccessor> modified; |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
507 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
508 if (parameters->GetSopClassUid() == OrthancStone::SopClassUid_DicomSeg) |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
509 { |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
510 modified.reset(dataAugmentation.ApplyBinaryMask(source)); |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
511 } |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
512 else if (source.GetFormat() == Orthanc::PixelFormat_RGB24) |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
513 { |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
514 modified.reset(dataAugmentation.Apply(source)); |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
515 } |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
516 else |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
517 { |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
518 std::unique_ptr<Orthanc::ImageAccessor> converted(parameters->ConvertToFloat(source)); |
1883
fba6e550e0ee
apply rescale slope/intercept in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1882
diff
changeset
|
519 assert(converted.get() != NULL); |
1887
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
520 |
aa4ed1cf4e8d
refactoring using DataAugmentationParameters
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1886
diff
changeset
|
521 modified.reset(dataAugmentation.Apply(*converted)); |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
522 } |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
523 |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
524 assert(modified.get() != NULL); |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
525 AnswerNumpyImage(output, *modified, compress); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
526 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
527 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
528 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
529 static bool IsRtStruct(const std::string& instanceId) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
530 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
531 static const char* SOP_CLASS_UID = "0008,0016"; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
532 static const char* RT_STRUCT_IOD = "1.2.840.10008.5.1.4.1.1.481.3"; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
533 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
534 std::string s; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
535 if (OrthancPlugins::RestApiGetString(s, "/instances/" + instanceId + "/content/" + SOP_CLASS_UID, false) && |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
536 !s.empty()) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
537 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
538 if (s[s.size() - 1] == '\0') // Deal with DICOM padding |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
539 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
540 s.resize(s.size() - 1); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
541 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
542 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
543 return s == RT_STRUCT_IOD; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
544 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
545 else |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
546 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
547 return false; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
548 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
549 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
550 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
551 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
552 static void ListRtStruct(OrthancPluginRestOutput* output, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
553 const char* url, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
554 const OrthancPluginHttpRequest* request) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
555 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
556 // This is a quick version of "/tools/find" on "SOPClassUID" (the |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
557 // latter would load all the DICOM files from disk) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
558 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
559 static const char* INSTANCES = "Instances"; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
560 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
561 Json::Value series; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
562 OrthancPlugins::RestApiGet(series, "/series?expand", false); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
563 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
564 if (series.type() != Json::arrayValue) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
565 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
566 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
567 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
568 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
569 Json::Value answer = Json::arrayValue; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
570 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
571 for (Json::Value::ArrayIndex i = 0; i < series.size(); i++) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
572 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
573 if (series[i].type() != Json::objectValue || |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
574 !series[i].isMember(INSTANCES) || |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
575 series[i][INSTANCES].type() != Json::arrayValue) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
576 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
577 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
578 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
579 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
580 const Json::Value& instances = series[i][INSTANCES]; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
581 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
582 for (Json::Value::ArrayIndex j = 0; j < instances.size(); j++) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
583 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
584 if (instances[j].type() != Json::stringValue) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
585 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
586 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
587 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
588 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
589 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
590 if (instances.size() > 0 && |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
591 IsRtStruct(instances[0].asString())) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
592 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
593 for (Json::Value::ArrayIndex j = 0; j < instances.size(); j++) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
594 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
595 answer.append(instances[j].asString()); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
596 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
597 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
598 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
599 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
600 std::string s = answer.toStyledString(); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
601 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), "application/json"); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
602 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
603 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
604 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
605 static void GetRtStruct(OrthancPluginRestOutput* output, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
606 const char* url, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
607 const OrthancPluginHttpRequest* request) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
608 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
609 static const char* STRUCTURES = "Structures"; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
610 static const char* INSTANCES = "Instances"; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
611 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
612 DicomStructureCache::Accessor accessor(DicomStructureCache::GetSingleton(), request->groups[0]); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
613 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
614 if (!accessor.IsValid()) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
615 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
616 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentItem); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
617 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
618 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
619 Json::Value answer; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
620 answer[STRUCTURES] = Json::arrayValue; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
621 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
622 for (size_t i = 0; i < accessor.GetRtStruct().GetStructuresCount(); i++) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
623 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
624 Json::Value color = Json::arrayValue; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
625 color.append(accessor.GetRtStruct().GetStructureColor(i).GetRed()); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
626 color.append(accessor.GetRtStruct().GetStructureColor(i).GetGreen()); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
627 color.append(accessor.GetRtStruct().GetStructureColor(i).GetBlue()); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
628 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
629 Json::Value structure; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
630 structure["Name"] = accessor.GetRtStruct().GetStructureName(i); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
631 structure["Interpretation"] = accessor.GetRtStruct().GetStructureInterpretation(i); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
632 structure["Color"] = color; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
633 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
634 answer[STRUCTURES].append(structure); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
635 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
636 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
637 std::set<std::string> sopInstanceUids; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
638 accessor.GetRtStruct().GetReferencedInstances(sopInstanceUids); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
639 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
640 answer[INSTANCES] = Json::arrayValue; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
641 for (std::set<std::string>::const_iterator it = sopInstanceUids.begin(); it != sopInstanceUids.end(); ++it) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
642 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
643 OrthancPlugins::OrthancString s; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
644 s.Assign(OrthancPluginLookupInstance(OrthancPlugins::GetGlobalContext(), it->c_str())); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
645 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
646 std::string t; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
647 s.ToString(t); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
648 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
649 answer[INSTANCES].append(t); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
650 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
651 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
652 std::string s = answer.toStyledString(); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
653 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), "application/json"); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
654 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
655 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
656 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
657 |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
658 static void RenderRtStruct(OrthancPluginRestOutput* output, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
659 const char* url, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
660 const OrthancPluginHttpRequest* request) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
661 { |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
662 DataAugmentationParameters dataAugmentation; |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
663 std::string structureName; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
664 std::string instanceId; |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
665 bool compress = false; |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
666 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
667 for (uint32_t i = 0; i < request->getCount; i++) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
668 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
669 std::string key(request->getKeys[i]); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
670 std::string value(request->getValues[i]); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
671 |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
672 if (!dataAugmentation.ParseParameter(key, value)) |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
673 { |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
674 if (key == "structure") |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
675 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
676 structureName = value; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
677 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
678 else if (key == "instance") |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
679 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
680 instanceId = value; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
681 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
682 else if (key == "compress") |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
683 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
684 compress = ParseBoolean(key, value); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
685 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
686 else |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
687 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
688 LOG(WARNING) << "Unsupported option: " << key; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
689 } |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
690 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
691 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
692 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
693 if (structureName.empty()) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
694 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
695 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
696 "Missing option \"structure\" to provide the structure name"); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
697 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
698 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
699 if (instanceId.empty()) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
700 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
701 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
702 "Missing option \"instance\" to provide the Orthanc identifier of the instance of interest"); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
703 } |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
704 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
705 std::unique_ptr<OrthancStone::DicomInstanceParameters> parameters(GetInstanceParameters(instanceId)); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
706 |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
707 std::list< std::vector<OrthancStone::Vector> > polygons; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
708 |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
709 { |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
710 DicomStructureCache::Accessor accessor(DicomStructureCache::GetSingleton(), request->groups[0]); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
711 |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
712 if (!accessor.IsValid()) |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
713 { |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
714 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentItem); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
715 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
716 |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
717 size_t structureIndex; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
718 bool found = false; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
719 for (size_t i = 0; i < accessor.GetRtStruct().GetStructuresCount(); i++) |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
720 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
721 if (accessor.GetRtStruct().GetStructureName(i) == structureName) |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
722 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
723 structureIndex = i; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
724 found = true; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
725 break; |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
726 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
727 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
728 |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
729 if (!found) |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
730 { |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
731 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentItem, |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
732 "Unknown structure name: " + structureName); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
733 } |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
734 |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
735 accessor.GetRtStruct().GetStructurePoints(polygons, structureIndex, parameters->GetSopInstanceUid()); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
736 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
737 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
738 Orthanc::Image tmp(Orthanc::PixelFormat_Grayscale8, parameters->GetWidth(), parameters->GetHeight(), false); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
739 Orthanc::ImageProcessing::Set(tmp, 0); |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
740 |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
741 OrthancStone::AffineTransform2D transform = dataAugmentation.ComputeTransform(parameters->GetWidth(), parameters->GetHeight()); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
742 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
743 for (std::list< std::vector<OrthancStone::Vector> >::const_iterator |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
744 it = polygons.begin(); it != polygons.end(); ++it) |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
745 { |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
746 std::vector<Orthanc::ImageProcessing::ImagePoint> points; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
747 points.reserve(it->size()); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
748 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
749 for (size_t i = 0; i < it->size(); i++) |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
750 { |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
751 double x, y; |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
752 parameters->GetGeometry().ProjectPoint(x, y, (*it) [i]); |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
753 x /= parameters->GetPixelSpacingX(); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
754 y /= parameters->GetPixelSpacingY(); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
755 |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
756 transform.Apply(x, y); |
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
757 |
1888
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
758 points.push_back(Orthanc::ImageProcessing::ImagePoint(x, y)); |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
759 } |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
760 |
9bdce2c91620
start rendering rt-struct
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1887
diff
changeset
|
761 Orthanc::ImageProcessing::FillPolygon(tmp, points, 255); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
762 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
763 |
1889
fe4befc9c2b0
rendering of rt-struct in plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1888
diff
changeset
|
764 AnswerNumpyImage(output, tmp, compress); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
765 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
766 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
767 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
768 OrthancPluginErrorCode OnChangeCallback(OrthancPluginChangeType changeType, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
769 OrthancPluginResourceType resourceType, |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
770 const char* resourceId) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
771 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
772 switch (changeType) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
773 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
774 case OrthancPluginChangeType_Deleted: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
775 if (resourceType == OrthancPluginResourceType_Instance) |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
776 { |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
777 DicomStructureCache::GetSingleton().Invalidate(resourceId); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
778 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
779 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
780 break; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
781 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
782 default: |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
783 break; |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
784 } |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
785 |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
786 return OrthancPluginErrorCode_Success; |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
787 } |
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
788 |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
789 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
790 extern "C" |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
791 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
792 ORTHANC_PLUGINS_API int32_t OrthancPluginInitialize(OrthancPluginContext* context) |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
793 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
794 OrthancPlugins::SetGlobalContext(context); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
795 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
796 #if ORTHANC_FRAMEWORK_VERSION_IS_ABOVE(1, 7, 2) |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
797 Orthanc::Logging::InitializePluginContext(context); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
798 #else |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
799 Orthanc::Logging::Initialize(context); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
800 #endif |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
801 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
802 /* Check the version of the Orthanc core */ |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
803 if (OrthancPluginCheckVersion(context) == 0) |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
804 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
805 char info[1024]; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
806 sprintf(info, "Your version of Orthanc (%s) must be above %d.%d.%d to run this plugin", |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
807 context->orthancVersion, |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
808 ORTHANC_PLUGINS_MINIMAL_MAJOR_NUMBER, |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
809 ORTHANC_PLUGINS_MINIMAL_MINOR_NUMBER, |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
810 ORTHANC_PLUGINS_MINIMAL_REVISION_NUMBER); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
811 OrthancPluginLogError(context, info); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
812 return -1; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
813 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
814 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
815 try |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
816 { |
1882
4e80b8afd0da
numpy in rendering plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1877
diff
changeset
|
817 OrthancPlugins::RegisterRestCallback<RenderNumpyFrame>("/stone/instances/([^/]+)/frames/([0-9]+)/numpy", true); |
1885
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
818 OrthancPlugins::RegisterRestCallback<ListRtStruct>("/stone/rt-struct", true); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
819 OrthancPlugins::RegisterRestCallback<GetRtStruct>("/stone/rt-struct/([^/]+)/info", true); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
820 OrthancPlugins::RegisterRestCallback<RenderRtStruct>("/stone/rt-struct/([^/]+)/numpy", true); |
ddaee6b96501
retrieving rt-struct info
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1884
diff
changeset
|
821 OrthancPluginRegisterOnChangeCallback(context, OnChangeCallback); |
1877
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
822 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
823 catch (...) |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
824 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
825 OrthancPlugins::LogError("Exception while initializing the Stone Web viewer plugin"); |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
826 return -1; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
827 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
828 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
829 return 0; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
830 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
831 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
832 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
833 ORTHANC_PLUGINS_API void OrthancPluginFinalize() |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
834 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
835 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
836 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
837 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
838 ORTHANC_PLUGINS_API const char* OrthancPluginGetName() |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
839 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
840 return PLUGIN_NAME; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
841 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
842 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
843 |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
844 ORTHANC_PLUGINS_API const char* OrthancPluginGetVersion() |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
845 { |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
846 return PLUGIN_VERSION; |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
847 } |
a2955abe4c2e
skeleton for the RenderingPlugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
848 } |