annotate Framework/Volumes/DicomVolumeImage.cpp @ 1048:f6be9412e42a

cleaning up IObservable.h
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 10 Oct 2019 14:11:52 +0200
parents a7351ad54960
children 391fb6d6905d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Stone of Orthanc
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU Affero General Public License
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * the License, or (at your option) any later version.
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * Affero General Public License for more details.
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 *
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * You should have received a copy of the GNU Affero General Public License
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 **/
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 #include "DicomVolumeImage.h"
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 #include <Core/OrthancException.h>
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25
949
32eaf4929b08 OrthancMultiframeVolumeLoader and OrthancSeriesVolumeProgressiveLoader now implement IGeometryProvider so that the geometry reference can be switched (CT or DOSE, for instance) + VolumeImageGeometry::SetSize renamed to VolumeImageGeometry::SetSizeInVoxels + prevent text layer update if text or properties do not change + a few stream operator<< for debug (Vector, Matrix,...) + fixed memory access aligment issues in ImageBuffer3D::ExtractSagittalSlice + fix for wrong screen Y offset of mpr slices in DicomVolumeImageMPRSlicer.
Benjamin Golinvaux <bgo@osimis.io>
parents: 814
diff changeset
26
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 namespace OrthancStone
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 void DicomVolumeImage::CheckHasGeometry() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 if (!HasGeometry())
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 {
956
a7351ad54960 Made IsContextLost automatically set the flag by checking with the emscripten
Benjamin Golinvaux <bgo@osimis.io>
parents: 949
diff changeset
33 LOG(ERROR) << "DicomVolumeImage::CheckHasGeometry(): (!HasGeometry())";
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 void DicomVolumeImage::Initialize(const VolumeImageGeometry& geometry,
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 Orthanc::PixelFormat format)
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42 geometry_.reset(new VolumeImageGeometry(geometry));
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43 image_.reset(new ImageBuffer3D(format, geometry_->GetWidth(), geometry_->GetHeight(),
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44 geometry_->GetDepth(), false /* don't compute range */));
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46 revision_ ++;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
47 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
48
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
49
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
50 void DicomVolumeImage::SetDicomParameters(const DicomInstanceParameters& parameters)
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 parameters_.reset(parameters.Clone());
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53 revision_ ++;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57 bool DicomVolumeImage::HasGeometry() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 return (geometry_.get() != NULL &&
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 image_.get() != NULL);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
64 ImageBuffer3D& DicomVolumeImage::GetPixelData()
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
65 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
66 CheckHasGeometry();
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67 return *image_;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
68 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
69
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
70
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
71 const ImageBuffer3D& DicomVolumeImage::GetPixelData() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
72 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73 CheckHasGeometry();
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 return *image_;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78 const VolumeImageGeometry& DicomVolumeImage::GetGeometry() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
79 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
80 CheckHasGeometry();
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 return *geometry_;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
83
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
84
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85 const DicomInstanceParameters& DicomVolumeImage::GetDicomParameters() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 if (HasDicomParameters())
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
89 return *parameters_;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
90 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
91 else
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
92 {
956
a7351ad54960 Made IsContextLost automatically set the flag by checking with the emscripten
Benjamin Golinvaux <bgo@osimis.io>
parents: 949
diff changeset
93 LOG(ERROR) << "DicomVolumeImage::GetDicomParameters(): (!HasDicomParameters())";
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
94 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
95 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
96 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
97 }