Mercurial > hg > orthanc-stone

annotate Framework/Volumes/DicomStructureSetSlicer2.cpp @ 1158:e3eaadcb314a broker

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
removed bad files
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 17 Nov 2019 11:37:47 +0100
parents 29f5f2031310
children 2d8ab34c8c91
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
998
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
1 /**
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
2 * Stone of Orthanc
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
6 *
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
8 * modify it under the terms of the GNU Affero General Public License
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
10 * the License, or (at your option) any later version.
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
11 *
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
15 * Affero General Public License for more details.
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
16 *
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
17 * You should have received a copy of the GNU Affero General Public License
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
19 **/
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
20
1019
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
21 #ifdef BGO_ENABLE_DICOMSTRUCTURESETLOADER2
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
22
998
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
23 #include "DicomStructureSetSlicer2.h"
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
24
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
25 #include "../Toolbox/GeometryToolbox.h"
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
26 #include "../Volumes/IVolumeSlicer.h"
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
27 #include "../Scene2D/PolylineSceneLayer.h"
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
28
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
29 namespace OrthancStone
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
30 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
31 DicomStructureSetSlicer2::DicomStructureSetSlicer2(boost::shared_ptr<DicomStructureSet2> structureSet)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
32 : structureSet_(structureSet)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
33 {}
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
34
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
35 IVolumeSlicer::IExtractedSlice* DicomStructureSetSlicer2::ExtractSlice(const CoordinateSystem3D& cuttingPlane)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
36 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
37 // revision is always the same, hence 0
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
38 return new DicomStructureSetSlice2(structureSet_, 0, cuttingPlane);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
39 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
40
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
41 DicomStructureSetSlice2::DicomStructureSetSlice2(
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
42 boost::weak_ptr<DicomStructureSet2> structureSet,
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
43 uint64_t revision,
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
44 const CoordinateSystem3D& cuttingPlane)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
45 : structureSet_(structureSet.lock())
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
46 , isValid_(false)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
47 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
48 bool opposite = false;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
49
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
50 if (structureSet_->GetStructuresCount() == 0)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
51 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
52 isValid_ = false;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
53 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
54 else
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
55 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
56 // some structures seen in real life have no polygons. We must be
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
57 // careful
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
58 bool found = false;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
59 size_t curStructure = 0;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
60 while (!found && curStructure < structureSet_->GetStructuresCount())
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
61 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
62 if (structureSet_->GetStructure(curStructure).IsValid())
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
63 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
64 found = true;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
65 const Vector normal = structureSet_->GetStructure(0).GetNormal();
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
66 isValid_ = (
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
67 GeometryToolbox::IsParallelOrOpposite(opposite, normal, cuttingPlane.GetNormal()) ||
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
68 GeometryToolbox::IsParallelOrOpposite(opposite, normal, cuttingPlane.GetAxisX()) ||
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
69 GeometryToolbox::IsParallelOrOpposite(opposite, normal, cuttingPlane.GetAxisY()));
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
70 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
71 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
72 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
73 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
74
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
75 ISceneLayer* DicomStructureSetSlice2::CreateSceneLayer(
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
76 const ILayerStyleConfigurator* configurator,
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
77 const CoordinateSystem3D& cuttingPlane)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
78 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
79 assert(isValid_);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
80
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
81 std::auto_ptr<PolylineSceneLayer> layer(new PolylineSceneLayer);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
82 layer->SetThickness(2); // thickness of the on-screen line
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
83
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
84 for (size_t i = 0; i < structureSet_->GetStructuresCount(); i++)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
85 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
86 const DicomStructure2& structure = structureSet_->GetStructure(i);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
87 if (structure.IsValid())
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
88 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
89 const Color& color = structure.GetColor();
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
90
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
91 std::vector< std::pair<Point2D, Point2D> > segments;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
92
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
93 if (structure.Project(segments, cuttingPlane))
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
94 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
95 for (size_t j = 0; j < segments.size(); j++)
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
96 {
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
97 PolylineSceneLayer::Chain chain;
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
98 chain.resize(2);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
99
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
100 chain[0] = ScenePoint2D(segments[j].first.x, segments[j].first.y);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
101 chain[1] = ScenePoint2D(segments[j].second.x, segments[j].second.y);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
102
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
103 layer->AddChain(chain, false /* NOT closed */, color);
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
104 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
105 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
106 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
107 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
108 return layer.release();
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
109 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
110 }
38b6bb0bdd72 added a new set of classes that correctly handle non-convex polygons (not
Benjamin Golinvaux <bgo@osimis.io>
parents:
diff changeset
111
1019
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
112
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
113 #endif
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
114 // BGO_ENABLE_DICOMSTRUCTURESETLOADER2
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
115
29f5f2031310 Added a way to specificy which structures are to be initially displayed (the
Benjamin Golinvaux <bgo@osimis.io>
parents: 998
diff changeset
116