Mercurial > hg > orthanc-stone

annotate Framework/Volumes/VolumeReslicer.h @ 981:c20dbaab360c

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Ability to cope with empty "Referenced SOP Instance UID" (dicom path (3006,0039)[i] / (0x3006, 0x0040)[0] / (0x3006, 0x0016)[0] / (0x0008, 0x1155)) + better logs + code formating
author Benjamin Golinvaux <bgo@osimis.io>
date Fri, 06 Sep 2019 09:38:18 +0200
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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b70e9be013e4 preparing for 2019
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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22 #pragma once
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24 #include "../Toolbox/Extent2D.h"
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25 #include "OrientedVolumeBoundingBox.h"
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26 #include "ImageBuffer3D.h"
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28 namespace OrthancStone
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29 {
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30 // Hypothesis: The output voxels always have square size
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31 class VolumeReslicer : public boost::noncopyable
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32 {
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33 private:
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34 // Input parameters
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35 Orthanc::PixelFormat outputFormat_;
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36 bool hasLinearFunction_;
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37 float scaling_; // "a" in "f(x) = a * x + b"
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38 float offset_; // "b" in "f(x) = a * x + b"
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39 ImageInterpolation interpolation_;
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40 bool fastMode_;
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41
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42 // Output of reslicing
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43 bool success_;
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44 Extent2D extent_;
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45 std::auto_ptr<Orthanc::Image> slice_;
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46 double pixelSpacing_;
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48 void CheckIterators(const ImageBuffer3D& source,
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49 const CoordinateSystem3D& plane,
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50 const OrientedVolumeBoundingBox& box) const;
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51
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52 void Reset();
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53
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54 float GetMinOutputValue() const;
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56 float GetMaxOutputValue() const;
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57
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58 void SetWindow(float low,
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59 float high);
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60
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61 public:
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62 VolumeReslicer();
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63
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64 void GetLinearFunction(float& scaling,
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65 float& offset) const;
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66
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67 void ResetLinearFunction();
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69 void SetLinearFunction(float scaling,
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70 float offset);
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71
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72 void FitRange(const ImageBuffer3D& image);
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73
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74 void SetWindowing(ImageWindowing windowing,
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75 const ImageBuffer3D& image,
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76 float rescaleSlope,
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77 float rescaleIntercept);
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78
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79 Orthanc::PixelFormat GetOutputFormat() const
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80 {
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81 return outputFormat_;
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82 }
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83
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84 void SetOutputFormat(Orthanc::PixelFormat format);
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85
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86 ImageInterpolation GetInterpolation() const
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87 {
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88 return interpolation_;
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89 }
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90
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91 void SetInterpolation(ImageInterpolation interpolation);
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92
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93 bool IsFastMode() const
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94 {
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95 return fastMode_;
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96 }
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98 void EnableFastMode(bool enabled)
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99 {
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100 fastMode_ = enabled;
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101 }
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102
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103 bool IsSuccess() const
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104 {
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105 return success_;
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106 }
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107
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108 const Extent2D& GetOutputExtent() const;
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109
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110 const Orthanc::ImageAccessor& GetOutputSlice() const;
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111
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112 Orthanc::ImageAccessor* ReleaseOutputSlice();
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113
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114 void Apply(const ImageBuffer3D& source,
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115 const VolumeImageGeometry& geometry,
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116 const CoordinateSystem3D& plane);
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117
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118 void Apply(const ImageBuffer3D& source,
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119 const VolumeImageGeometry& geometry,
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120 const CoordinateSystem3D& plane,
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121 double voxelSize);
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122
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123 double GetPixelSpacing() const;
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124 };
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125 }