Mercurial > hg > orthanc-stone
annotate OrthancStone/Sources/Toolbox/DicomStructuredReport.h @ 2092:b7d4d288459a dicom-sr
refactoring
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 08 Nov 2023 10:32:16 +0100 |
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1 /** |
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2 * Stone of Orthanc |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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7 * |
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8 * This program is free software: you can redistribute it and/or |
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9 * modify it under the terms of the GNU Lesser General Public License |
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10 * as published by the Free Software Foundation, either version 3 of |
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11 * the License, or (at your option) any later version. |
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12 * |
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13 * This program is distributed in the hope that it will be useful, but |
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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16 * Lesser General Public License for more details. |
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17 * |
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18 * You should have received a copy of the GNU Lesser General Public |
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19 * License along with this program. If not, see |
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20 * <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #pragma once |
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25 |
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26 #if !defined(ORTHANC_ENABLE_DCMTK) |
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27 # error The macro ORTHANC_ENABLE_DCMTK must be defined |
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28 #endif |
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29 |
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30 #if ORTHANC_ENABLE_DCMTK != 1 |
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31 # error Support for DCMTK must be enabled |
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32 #endif |
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33 |
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34 #include <DicomParsing/ParsedDicomFile.h> |
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35 |
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36 #include <dcmtk/dcmdata/dcitem.h> |
2087 | 37 #include <list> |
2089 | 38 #include <set> |
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39 |
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40 namespace OrthancStone |
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41 { |
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42 class DicomStructuredReport : public boost::noncopyable |
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43 { |
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44 private: |
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45 class Structure; |
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46 class Point; |
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47 class Polyline; |
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48 |
2089 | 49 class ReferencedInstance : public boost::noncopyable |
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50 { |
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51 private: |
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52 std::string studyInstanceUid_; |
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53 std::string seriesInstanceUid_; |
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54 std::string sopClassUid_; |
2089 | 55 std::set<unsigned int> frames_; |
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56 |
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57 public: |
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58 ReferencedInstance(const std::string& studyInstanceUid, |
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59 const std::string& seriesInstanceUid, |
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60 const std::string& sopClassUid) : |
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61 studyInstanceUid_(studyInstanceUid), |
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62 seriesInstanceUid_(seriesInstanceUid), |
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63 sopClassUid_(sopClassUid) |
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64 { |
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65 } |
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66 |
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67 const std::string& GetStudyInstanceUid() const |
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68 { |
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69 return studyInstanceUid_; |
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70 } |
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71 |
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72 const std::string& GetSeriesInstanceUid() const |
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73 { |
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74 return seriesInstanceUid_; |
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75 } |
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76 |
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77 const std::string& GetSopClassUid() const |
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78 { |
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79 return sopClassUid_; |
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80 } |
2089 | 81 |
82 void AddFrame(unsigned int frame); | |
83 | |
84 const std::set<unsigned int>& GetFrames() const | |
85 { | |
86 return frames_; | |
87 } | |
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88 }; |
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89 |
2089 | 90 |
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91 void AddStructure(const std::string& sopInstanceUid, |
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92 DcmItem& group, |
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93 bool hasFrameNumber, |
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94 unsigned int frameNumber, |
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95 bool hasProbabilityOfCancer, |
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96 float probabilityOfCancer); |
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97 |
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98 std::string studyInstanceUid_; |
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99 std::string seriesInstanceUid_; |
2092 | 100 std::string sopInstanceUid_; |
2089 | 101 std::map<std::string, ReferencedInstance*> instancesInformation_; |
102 std::vector<std::string> orderedInstances_; | |
103 std::list<Structure*> structures_; | |
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104 |
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105 public: |
2092 | 106 class ReferencedFrame |
2089 | 107 { |
108 private: | |
109 std::string studyInstanceUid_; | |
110 std::string seriesInstanceUid_; | |
111 std::string sopInstanceUid_; | |
112 std::string sopClassUid_; | |
113 unsigned int frameNumber_; | |
114 | |
115 public: | |
2092 | 116 ReferencedFrame(const std::string& studyInstanceUid, |
117 const std::string& seriesInstanceUid, | |
118 const std::string& sopInstanceUid, | |
119 const std::string& sopClassUid, | |
120 unsigned int frameNumber) : | |
2089 | 121 studyInstanceUid_(studyInstanceUid), |
122 seriesInstanceUid_(seriesInstanceUid), | |
123 sopInstanceUid_(sopInstanceUid), | |
124 sopClassUid_(sopClassUid), | |
125 frameNumber_(frameNumber) | |
126 { | |
127 } | |
128 | |
129 const std::string& GetStudyInstanceUid() const | |
130 { | |
131 return studyInstanceUid_; | |
132 } | |
133 | |
134 const std::string& GetSeriesInstanceUid() const | |
135 { | |
136 return seriesInstanceUid_; | |
137 } | |
138 | |
139 const std::string& GetSopInstanceUid() const | |
140 { | |
141 return sopInstanceUid_; | |
142 } | |
143 | |
144 const std::string& GetSopClassUid() const | |
145 { | |
146 return sopClassUid_; | |
147 } | |
148 | |
149 unsigned int GetFrameNumber() const | |
150 { | |
151 return frameNumber_; | |
152 } | |
153 }; | |
154 | |
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155 DicomStructuredReport(Orthanc::ParsedDicomFile& dicom); |
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156 |
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157 ~DicomStructuredReport(); |
2089 | 158 |
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159 const std::string& GetStudyInstanceUid() const |
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160 { |
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161 return studyInstanceUid_; |
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162 } |
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163 |
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164 const std::string& GetSeriesInstanceUid() const |
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165 { |
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166 return seriesInstanceUid_; |
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167 } |
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168 |
2092 | 169 const std::string& GetSopInstanceUid() const |
170 { | |
171 return sopInstanceUid_; | |
172 } | |
173 | |
2089 | 174 size_t GetReferencedInstancesCount() const |
175 { | |
176 return orderedInstances_.size(); | |
177 } | |
178 | |
179 void GetReferencedInstance(std::string& studyInstanceUid, | |
180 std::string& seriesInstanceUid, | |
181 std::string& sopInstanceUid, | |
182 std::string& sopClassUid, | |
183 size_t i) const; | |
184 | |
2092 | 185 void ExportReferencedFrames(std::list<ReferencedFrame>& frames) const; |
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186 }; |
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187 } |