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annotate Framework/Oracle/GenericOracleRunner.cpp @ 1488:7f16987131e1

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Missing include + docs + public getter for volume geometry in multiframe loader
author Benjamin Golinvaux <bgo@osimis.io>
date Tue, 23 Jun 2020 13:44:23 +0200
parents 121d01aa328e
children
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #include "GenericOracleRunner.h"
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23
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24 #if !defined(ORTHANC_ENABLE_DCMTK)
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25 # error The macro ORTHANC_ENABLE_DCMTK must be defined
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26 #endif
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27
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28 #include "GetOrthancImageCommand.h"
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29 #include "GetOrthancWebViewerJpegCommand.h"
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30 #include "HttpCommand.h"
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31 #include "OracleCommandExceptionMessage.h"
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32 #include "OrthancRestApiCommand.h"
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33 #include "ParseDicomFromFileCommand.h"
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34 #include "ParseDicomFromWadoCommand.h"
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35 #include "ReadFileCommand.h"
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36
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37 #if ORTHANC_ENABLE_DCMTK == 1
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38 # include "ParseDicomSuccessMessage.h"
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39 # include <dcmtk/dcmdata/dcdeftag.h>
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40 # include <dcmtk/dcmdata/dcfilefo.h>
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41 static unsigned int BUCKET_DICOMDIR = 0;
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42 static unsigned int BUCKET_SOP = 1;
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43 #endif
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44
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45 #include <Compression/GzipCompressor.h>
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46 #include <HttpClient.h>
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47 #include <OrthancException.h>
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48 #include <Toolbox.h>
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49 #include <SystemToolbox.h>
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50
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51 #include <boost/filesystem.hpp>
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52
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53
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54
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55 namespace OrthancStone
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56 {
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57 static void CopyHttpHeaders(Orthanc::HttpClient& client,
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58 const Orthanc::HttpClient::HttpHeaders& headers)
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59 {
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60 for (Orthanc::HttpClient::HttpHeaders::const_iterator
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61 it = headers.begin(); it != headers.end(); it++ )
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62 {
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63 client.AddHeader(it->first, it->second);
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64 }
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65 }
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66
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67
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68 static void DecodeAnswer(std::string& answer,
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69 const Orthanc::HttpClient::HttpHeaders& headers)
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70 {
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71 Orthanc::HttpCompression contentEncoding = Orthanc::HttpCompression_None;
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72
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73 for (Orthanc::HttpClient::HttpHeaders::const_iterator it = headers.begin();
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74 it != headers.end(); ++it)
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75 {
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76 std::string s;
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77 Orthanc::Toolbox::ToLowerCase(s, it->first);
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78
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79 if (s == "content-encoding")
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80 {
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81 if (it->second == "gzip")
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82 {
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83 contentEncoding = Orthanc::HttpCompression_Gzip;
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84 }
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85 else
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86 {
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87 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol,
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88 "Unsupported HTTP Content-Encoding: " + it->second);
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89 }
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90
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91 break;
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92 }
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93 }
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94
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95 if (contentEncoding == Orthanc::HttpCompression_Gzip)
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96 {
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97 std::string compressed;
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98 answer.swap(compressed);
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99
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100 Orthanc::GzipCompressor compressor;
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101 compressor.Uncompress(answer, compressed.c_str(), compressed.size());
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102
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103 LOG(INFO) << "Uncompressing gzip Encoding: from " << compressed.size()
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104 << " to " << answer.size() << " bytes";
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105 }
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106 }
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107
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108
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109 static void RunHttpCommand(std::string& answer,
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110 Orthanc::HttpClient::HttpHeaders& answerHeaders,
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111 const HttpCommand& command)
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112 {
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113 Orthanc::HttpClient client;
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114 client.SetUrl(command.GetUrl());
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115 client.SetMethod(command.GetMethod());
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116 client.SetTimeout(command.GetTimeout());
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117
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118 CopyHttpHeaders(client, command.GetHttpHeaders());
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119
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120 if (command.HasCredentials())
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121 {
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122 client.SetCredentials(command.GetUsername().c_str(), command.GetPassword().c_str());
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123 }
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124
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125 if (command.GetMethod() == Orthanc::HttpMethod_Post ||
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126 command.GetMethod() == Orthanc::HttpMethod_Put)
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127 {
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128 client.SetBody(command.GetBody());
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129 }
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130
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131 client.ApplyAndThrowException(answer, answerHeaders);
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132 DecodeAnswer(answer, answerHeaders);
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133 }
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134
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135
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136 static void RunInternal(boost::weak_ptr<IObserver> receiver,
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137 IMessageEmitter& emitter,
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138 const HttpCommand& command)
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139 {
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140 std::string answer;
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141 Orthanc::HttpClient::HttpHeaders answerHeaders;
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142 RunHttpCommand(answer, answerHeaders, command);
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143
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144 HttpCommand::SuccessMessage message(command, answerHeaders, answer);
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145 emitter.EmitMessage(receiver, message);
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146 }
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147
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148
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149 static void RunOrthancRestApiCommand(std::string& answer,
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150 Orthanc::HttpClient::HttpHeaders& answerHeaders,
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151 const Orthanc::WebServiceParameters& orthanc,
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152 const OrthancRestApiCommand& command)
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153 {
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154 Orthanc::HttpClient client(orthanc, command.GetUri());
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155 client.SetRedirectionFollowed(false);
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156 client.SetMethod(command.GetMethod());
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157 client.SetTimeout(command.GetTimeout());
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158
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159 CopyHttpHeaders(client, command.GetHttpHeaders());
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160
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161 if (command.GetMethod() == Orthanc::HttpMethod_Post ||
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162 command.GetMethod() == Orthanc::HttpMethod_Put)
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163 {
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164 client.SetBody(command.GetBody());
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165 }
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166
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167 client.ApplyAndThrowException(answer, answerHeaders);
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168 DecodeAnswer(answer, answerHeaders);
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169 }
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170
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171
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172 static void RunInternal(boost::weak_ptr<IObserver> receiver,
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173 IMessageEmitter& emitter,
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174 const Orthanc::WebServiceParameters& orthanc,
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175 const OrthancRestApiCommand& command)
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176 {
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177 std::string answer;
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178 Orthanc::HttpClient::HttpHeaders answerHeaders;
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179 RunOrthancRestApiCommand(answer, answerHeaders, orthanc, command);
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180
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181 OrthancRestApiCommand::SuccessMessage message(command, answerHeaders, answer);
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182 emitter.EmitMessage(receiver, message);
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183 }
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184
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185
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186 static void RunInternal(boost::weak_ptr<IObserver> receiver,
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187 IMessageEmitter& emitter,
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188 const Orthanc::WebServiceParameters& orthanc,
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189 const GetOrthancImageCommand& command)
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190 {
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191 Orthanc::HttpClient client(orthanc, command.GetUri());
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192 client.SetRedirectionFollowed(false);
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193 client.SetTimeout(command.GetTimeout());
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194
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195 CopyHttpHeaders(client, command.GetHttpHeaders());
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196
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197 std::string answer;
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198 Orthanc::HttpClient::HttpHeaders answerHeaders;
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199 client.ApplyAndThrowException(answer, answerHeaders);
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200
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201 DecodeAnswer(answer, answerHeaders);
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202
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203 command.ProcessHttpAnswer(receiver, emitter, answer, answerHeaders);
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204 }
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205
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206
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207 static void RunInternal(boost::weak_ptr<IObserver> receiver,
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208 IMessageEmitter& emitter,
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209 const Orthanc::WebServiceParameters& orthanc,
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210 const GetOrthancWebViewerJpegCommand& command)
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211 {
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212 Orthanc::HttpClient client(orthanc, command.GetUri());
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213 client.SetRedirectionFollowed(false);
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214 client.SetTimeout(command.GetTimeout());
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215
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216 CopyHttpHeaders(client, command.GetHttpHeaders());
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217
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218 std::string answer;
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219 Orthanc::HttpClient::HttpHeaders answerHeaders;
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220 client.ApplyAndThrowException(answer, answerHeaders);
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221
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222 DecodeAnswer(answer, answerHeaders);
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223
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224 command.ProcessHttpAnswer(receiver, emitter, answer);
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225 }
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226
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227
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228 static std::string GetPath(const std::string& root,
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229 const std::string& file)
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230 {
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231 boost::filesystem::path a(root);
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232 boost::filesystem::path b(file);
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233
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234 boost::filesystem::path c;
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235 if (b.is_absolute())
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236 {
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237 c = b;
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238 }
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239 else
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240 {
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241 c = a / b;
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242 }
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243
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244 return c.string();
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245 }
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246
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247
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248 static void RunInternal(boost::weak_ptr<IObserver> receiver,
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249 IMessageEmitter& emitter,
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250 const std::string& root,
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251 const ReadFileCommand& command)
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252 {
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253 std::string path = GetPath(root, command.GetPath());
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254 LOG(TRACE) << "Oracle reading file: " << path;
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255
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256 std::string content;
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257 Orthanc::SystemToolbox::ReadFile(content, path, true /* log */);
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258
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259 ReadFileCommand::SuccessMessage message(command, content);
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260 emitter.EmitMessage(receiver, message);
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261 }
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262
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263
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264 #if ORTHANC_ENABLE_DCMTK == 1
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265 static Orthanc::ParsedDicomFile* ParseDicom(uint64_t& fileSize, /* OUT */
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266 const std::string& path,
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267 bool isPixelData)
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268 {
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269 if (!Orthanc::SystemToolbox::IsRegularFile(path))
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270 {
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271 throw Orthanc::OrthancException(Orthanc::ErrorCode_InexistentFile);
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272 }
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273
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274 LOG(TRACE) << "Parsing DICOM file, " << (isPixelData ? "with" : "without")
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275 << " pixel data: " << path;
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276
48befc2bf66d ParseDicomFromWadoCommand
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277 boost::posix_time::ptime start = boost::posix_time::microsec_clock::local_time();
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diff changeset
278
48befc2bf66d ParseDicomFromWadoCommand
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279 fileSize = Orthanc::SystemToolbox::GetFileSize(path);
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280
48befc2bf66d ParseDicomFromWadoCommand
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281 // Check for 32bit systems
48befc2bf66d ParseDicomFromWadoCommand
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282 if (fileSize != static_cast<uint64_t>(static_cast<size_t>(fileSize)))
1104
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283 {
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
284 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotEnoughMemory);
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
285 }
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
286
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287 DcmFileFormat dicom;
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
288 bool ok;
48befc2bf66d ParseDicomFromWadoCommand
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289
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290 if (isPixelData)
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diff changeset
291 {
48befc2bf66d ParseDicomFromWadoCommand
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292 ok = dicom.loadFile(path.c_str()).good();
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293 }
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294 else
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295 {
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42581a6182c8 reactivation of the cache of parsed DICOM files
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296 #if DCMTK_VERSION_NUMBER >= 362
1151
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297 /**
48befc2bf66d ParseDicomFromWadoCommand
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298 * NB : We could stop at (0x3007, 0x0000) instead of
48befc2bf66d ParseDicomFromWadoCommand
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299 * DCM_PixelData as the Stone framework does not use further
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diff changeset
300 * tags (cf. the Orthanc::DICOM_TAG_* constants), but we still
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
301 * use "PixelData" as this does not change the runtime much, and
48befc2bf66d ParseDicomFromWadoCommand
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302 * as it is more explicit.
48befc2bf66d ParseDicomFromWadoCommand
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303 **/
48befc2bf66d ParseDicomFromWadoCommand
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304 static const DcmTagKey STOP = DCM_PixelData;
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305 //static const DcmTagKey STOP(0x3007, 0x0000);
1148
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306
1151
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diff changeset
307 ok = dicom.loadFileUntilTag(path.c_str(), EXS_Unknown, EGL_noChange,
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
308 DCM_MaxReadLength, ERM_autoDetect, STOP).good();
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
309 #else
48befc2bf66d ParseDicomFromWadoCommand
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310 // The primitive "loadFileUntilTag" was introduced in DCMTK 3.6.2
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
311 ok = dicom.loadFile(path.c_str()).good();
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
312 #endif
48befc2bf66d ParseDicomFromWadoCommand
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313 }
1104
98cdfe5768a4 ReadFileCommand
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314
1151
48befc2bf66d ParseDicomFromWadoCommand
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315 if (ok)
1110
b82b74d13830 ParseDicomFileCommand
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diff changeset
316 {
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c38c89684d83 replacing std::auto_ptr by std::unique_ptr
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317 std::unique_ptr<Orthanc::ParsedDicomFile> result(new Orthanc::ParsedDicomFile(dicom));
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
318
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
319 boost::posix_time::ptime end = boost::posix_time::microsec_clock::local_time();
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
320 LOG(TRACE) << path << ": parsed in " << (end-start).total_milliseconds() << " ms";
1136
42581a6182c8 reactivation of the cache of parsed DICOM files
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diff changeset
321
1151
48befc2bf66d ParseDicomFromWadoCommand
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322 return result.release();
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
323 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
324 else
48befc2bf66d ParseDicomFromWadoCommand
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parents: 1150
diff changeset
325 {
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
326 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat,
48befc2bf66d ParseDicomFromWadoCommand
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parents: 1150
diff changeset
327 "Cannot parse file: " + path);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
328 }
1104
98cdfe5768a4 ReadFileCommand
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diff changeset
329 }
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
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diff changeset
330
1134
87fbeb823375 allocating messages from oracle commands on the stack
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parents: 1128
diff changeset
331
87fbeb823375 allocating messages from oracle commands on the stack
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diff changeset
332 static void RunInternal(boost::weak_ptr<IObserver> receiver,
87fbeb823375 allocating messages from oracle commands on the stack
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diff changeset
333 IMessageEmitter& emitter,
1150
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diff changeset
334 boost::shared_ptr<ParsedDicomCache> cache,
1134
87fbeb823375 allocating messages from oracle commands on the stack
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diff changeset
335 const std::string& root,
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
336 const ParseDicomFromFileCommand& command)
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
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parents: 1116
diff changeset
337 {
1137
cc029987b6dc improved cache key
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diff changeset
338 const std::string path = GetPath(root, command.GetPath());
cc029987b6dc improved cache key
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parents: 1136
diff changeset
339
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
340 if (cache)
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
341 {
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
342 ParsedDicomCache::Reader reader(*cache, BUCKET_DICOMDIR, path);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
343 if (reader.IsValid() &&
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
344 (!command.IsPixelDataIncluded() ||
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
345 reader.HasPixelData()))
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
346 {
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
347 // Reuse the DICOM file from the cache
1484
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
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diff changeset
348 ParseDicomSuccessMessage message(command, command.GetSource(), reader.GetDicom(),
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
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diff changeset
349 reader.GetFileSize(), reader.HasPixelData());
1151
48befc2bf66d ParseDicomFromWadoCommand
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diff changeset
350 emitter.EmitMessage(receiver, message);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
351 return;
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
352 }
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
353 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
354
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
355 uint64_t fileSize;
1299
c38c89684d83 replacing std::auto_ptr by std::unique_ptr
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parents: 1271
diff changeset
356 std::unique_ptr<Orthanc::ParsedDicomFile> parsed(ParseDicom(fileSize, path, command.IsPixelDataIncluded()));
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
357
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
358 if (fileSize != static_cast<size_t>(fileSize))
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
359 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
360 // Cannot load such a large file on 32-bit architecture
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
361 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotEnoughMemory);
48befc2bf66d ParseDicomFromWadoCommand
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parents: 1150
diff changeset
362 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
363
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
364 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
365 ParseDicomSuccessMessage message
1484
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
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parents: 1455
diff changeset
366 (command, command.GetSource(), *parsed,
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1455
diff changeset
367 static_cast<size_t>(fileSize), command.IsPixelDataIncluded());
1151
48befc2bf66d ParseDicomFromWadoCommand
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parents: 1150
diff changeset
368 emitter.EmitMessage(receiver, message);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
369 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
370
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
371 if (cache)
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
372 {
48befc2bf66d ParseDicomFromWadoCommand
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parents: 1150
diff changeset
373 // Store it into the cache for future use
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
374
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
375 // Invalidate to overwrite DICOM instance that would already
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
376 // be stored without pixel data
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
377 cache->Invalidate(BUCKET_DICOMDIR, path);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
378
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
379 cache->Acquire(BUCKET_DICOMDIR, path, parsed.release(),
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
380 static_cast<size_t>(fileSize), command.IsPixelDataIncluded());
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
381 }
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
382 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
383
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
384
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
385 static void RunInternal(boost::weak_ptr<IObserver> receiver,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
386 IMessageEmitter& emitter,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
387 boost::shared_ptr<ParsedDicomCache> cache,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
388 const Orthanc::WebServiceParameters& orthanc,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
389 const ParseDicomFromWadoCommand& command)
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
390 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
391 if (cache)
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
392 {
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
393 ParsedDicomCache::Reader reader(*cache, BUCKET_SOP, command.GetSopInstanceUid());
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
394 if (reader.IsValid() &&
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
395 reader.HasPixelData())
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
396 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
397 // Reuse the DICOM file from the cache
1484
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1455
diff changeset
398 ParseDicomSuccessMessage message(command, command.GetSource(), reader.GetDicom(),
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1455
diff changeset
399 reader.GetFileSize(), reader.HasPixelData());
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
400 emitter.EmitMessage(receiver, message);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
401 return;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
402 }
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
403 }
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
404
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
405 std::string answer;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
406 Orthanc::HttpClient::HttpHeaders answerHeaders;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
407
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
408 switch (command.GetRestCommand().GetType())
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
409 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
410 case IOracleCommand::Type_Http:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
411 RunHttpCommand(answer, answerHeaders, dynamic_cast<const HttpCommand&>(command.GetRestCommand()));
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
412 break;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
413
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
414 case IOracleCommand::Type_OrthancRestApi:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
415 RunOrthancRestApiCommand(answer, answerHeaders, orthanc,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
416 dynamic_cast<const OrthancRestApiCommand&>(command.GetRestCommand()));
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
417 break;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
418
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
419 default:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
420 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
421 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
422
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
423 size_t fileSize;
1299
c38c89684d83 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
424 std::unique_ptr<Orthanc::ParsedDicomFile> parsed(ParseDicomSuccessMessage::ParseWadoAnswer(fileSize, answer, answerHeaders));
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
425
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
426 {
1484
121d01aa328e SeriesThumbnailsLoader working on raw dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1455
diff changeset
427 ParseDicomSuccessMessage message(command, command.GetSource(), *parsed, fileSize,
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
428 true /* pixel data always is included in WADO-RS */);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
429 emitter.EmitMessage(receiver, message);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
430 }
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
431
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
432 if (cache)
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
433 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
434 // Store it into the cache for future use
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
435 cache->Acquire(BUCKET_SOP, command.GetSopInstanceUid(), parsed.release(), fileSize, true);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
436 }
1124
a8bf81756839 unsuccessful attempt to cache ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1116
diff changeset
437 }
1110
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
438 #endif
1104
98cdfe5768a4 ReadFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1098
diff changeset
439
98cdfe5768a4 ReadFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1098
diff changeset
440
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
441 void GenericOracleRunner::Run(boost::weak_ptr<IObserver> receiver,
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
442 IMessageEmitter& emitter,
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
443 const IOracleCommand& command)
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
444 {
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
445 Orthanc::ErrorCode error = Orthanc::ErrorCode_Success;
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
446
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
447 try
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
448 {
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
449 switch (command.GetType())
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450 {
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 case IOracleCommand::Type_Sleep:
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
452 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadParameterType,
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
453 "Sleep command cannot be executed by the runner");
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
454
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
455 case IOracleCommand::Type_Http:
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
456 RunInternal(receiver, emitter, dynamic_cast<const HttpCommand&>(command));
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
457 break;
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459 case IOracleCommand::Type_OrthancRestApi:
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
460 RunInternal(receiver, emitter, orthanc_,
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
461 dynamic_cast<const OrthancRestApiCommand&>(command));
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
462 break;
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
463
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
464 case IOracleCommand::Type_GetOrthancImage:
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
465 RunInternal(receiver, emitter, orthanc_,
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
466 dynamic_cast<const GetOrthancImageCommand&>(command));
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
467 break;
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
469 case IOracleCommand::Type_GetOrthancWebViewerJpeg:
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
470 RunInternal(receiver, emitter, orthanc_,
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
471 dynamic_cast<const GetOrthancWebViewerJpegCommand&>(command));
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
472 break;
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
473
1104
98cdfe5768a4 ReadFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1098
diff changeset
474 case IOracleCommand::Type_ReadFile:
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
475 RunInternal(receiver, emitter, rootDirectory_,
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
476 dynamic_cast<const ReadFileCommand&>(command));
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
477 break;
1104
98cdfe5768a4 ReadFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1098
diff changeset
478
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
479 case IOracleCommand::Type_ParseDicomFromFile:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
480 case IOracleCommand::Type_ParseDicomFromWado:
1110
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
481 #if ORTHANC_ENABLE_DCMTK == 1
1151
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
482 switch (command.GetType())
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
483 {
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
484 case IOracleCommand::Type_ParseDicomFromFile:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
485 RunInternal(receiver, emitter, dicomCache_, rootDirectory_,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
486 dynamic_cast<const ParseDicomFromFileCommand&>(command));
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
487 break;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
488
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
489 case IOracleCommand::Type_ParseDicomFromWado:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
490 RunInternal(receiver, emitter, dicomCache_, orthanc_,
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
491 dynamic_cast<const ParseDicomFromWadoCommand&>(command));
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
492 break;
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
493
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
494 default:
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
495 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
48befc2bf66d ParseDicomFromWadoCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1150
diff changeset
496 }
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
497 break;
1110
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
498 #else
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
499 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented,
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
500 "DCMTK must be enabled to parse DICOM files");
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
501 #endif
b82b74d13830 ParseDicomFileCommand
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1104
diff changeset
502
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
503 default:
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
504 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented);
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
505 }
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
506 }
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
507 catch (Orthanc::OrthancException& e)
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
508 {
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
509 LOG(ERROR) << "Exception within the oracle: " << e.What();
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
510 error = e.GetErrorCode();
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
511 }
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
512 catch (...)
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513 {
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 LOG(ERROR) << "Threaded exception within the oracle";
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
515 error = Orthanc::ErrorCode_InternalError;
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
516 }
1134
87fbeb823375 allocating messages from oracle commands on the stack
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1128
diff changeset
517
1135
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
518 if (error != Orthanc::ErrorCode_Success)
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
519 {
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
520 OracleCommandExceptionMessage message(command, error);
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
521 emitter.EmitMessage(receiver, message);
a0a33e5ea5bb IOracleCommand::Clone()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
522 }
1077
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
523 }
d7a18a3cd6f9 IOracleRunner
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 }