Mercurial > hg > orthanc-stone

annotate OrthancStone/Sources/Toolbox/DicomStructuredReport.h @ 2096:79e984a89a38 dicom-sr

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integration mainline->dicom-sr
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 08 Nov 2023 15:15:48 +0100
parents b7d4d288459a 7c3d65166c26
children a9e23ef9ee09
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU Lesser General Public License
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10 * as published by the Free Software Foundation, either version 3 of
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11 * the License, or (at your option) any later version.
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12 *
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13 * This program is distributed in the hope that it will be useful, but
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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16 * Lesser General Public License for more details.
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17 *
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18 * You should have received a copy of the GNU Lesser General Public
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19 * License along with this program. If not, see
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20 * <http://www.gnu.org/licenses/>.
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21 **/
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22
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23
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24 #pragma once
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25
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26 #if !defined(ORTHANC_ENABLE_DCMTK)
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27 # error The macro ORTHANC_ENABLE_DCMTK must be defined
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28 #endif
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29
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30 #if ORTHANC_ENABLE_DCMTK != 1
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31 # error Support for DCMTK must be enabled
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32 #endif
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33
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34 #include <DicomParsing/ParsedDicomFile.h>
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35
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36 #include <dcmtk/dcmdata/dcitem.h>
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37 #include <list>
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38 #include <set>
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39
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40 namespace OrthancStone
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41 {
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42 class DicomStructuredReport : public boost::noncopyable
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43 {
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44 private:
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45 class Structure;
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46 class Point;
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47 class Polyline;
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48
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49 class ReferencedInstance : public boost::noncopyable
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50 {
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51 private:
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52 std::string studyInstanceUid_;
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53 std::string seriesInstanceUid_;
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54 std::string sopClassUid_;
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55 std::set<unsigned int> frames_;
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56
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57 public:
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58 ReferencedInstance(const std::string& studyInstanceUid,
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59 const std::string& seriesInstanceUid,
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60 const std::string& sopClassUid) :
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61 studyInstanceUid_(studyInstanceUid),
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62 seriesInstanceUid_(seriesInstanceUid),
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63 sopClassUid_(sopClassUid)
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64 {
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65 }
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66
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67 const std::string& GetStudyInstanceUid() const
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68 {
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69 return studyInstanceUid_;
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70 }
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71
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72 const std::string& GetSeriesInstanceUid() const
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73 {
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74 return seriesInstanceUid_;
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75 }
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76
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77 const std::string& GetSopClassUid() const
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78 {
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79 return sopClassUid_;
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80 }
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81
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82 void AddFrame(unsigned int frame);
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83
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84 const std::set<unsigned int>& GetFrames() const
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85 {
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86 return frames_;
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87 }
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88 };
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89
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90
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91 void AddStructure(const std::string& sopInstanceUid,
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92 DcmItem& group,
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93 bool hasFrameNumber,
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94 unsigned int frameNumber,
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95 bool hasProbabilityOfCancer,
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96 float probabilityOfCancer);
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97
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98 std::string studyInstanceUid_;
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99 std::string seriesInstanceUid_;
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100 std::string sopInstanceUid_;
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101 std::map<std::string, ReferencedInstance*> instancesInformation_;
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102 std::vector<std::string> orderedInstances_;
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103 std::list<Structure*> structures_;
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104
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105 public:
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106 class ReferencedFrame
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107 {
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108 private:
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109 std::string studyInstanceUid_;
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110 std::string seriesInstanceUid_;
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111 std::string sopInstanceUid_;
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112 std::string sopClassUid_;
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113 unsigned int frameNumber_;
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114
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115 public:
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116 ReferencedFrame(const std::string& studyInstanceUid,
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117 const std::string& seriesInstanceUid,
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118 const std::string& sopInstanceUid,
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119 const std::string& sopClassUid,
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120 unsigned int frameNumber) :
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121 studyInstanceUid_(studyInstanceUid),
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122 seriesInstanceUid_(seriesInstanceUid),
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123 sopInstanceUid_(sopInstanceUid),
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124 sopClassUid_(sopClassUid),
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125 frameNumber_(frameNumber)
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126 {
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127 }
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128
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129 const std::string& GetStudyInstanceUid() const
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130 {
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131 return studyInstanceUid_;
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132 }
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133
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134 const std::string& GetSeriesInstanceUid() const
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135 {
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136 return seriesInstanceUid_;
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137 }
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138
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139 const std::string& GetSopInstanceUid() const
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140 {
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141 return sopInstanceUid_;
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142 }
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143
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144 const std::string& GetSopClassUid() const
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145 {
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146 return sopClassUid_;
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147 }
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148
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149 unsigned int GetFrameNumber() const
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150 {
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151 return frameNumber_;
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152 }
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153 };
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154
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155 DicomStructuredReport(Orthanc::ParsedDicomFile& dicom);
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156
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157 ~DicomStructuredReport();
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158
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159 const std::string& GetStudyInstanceUid() const
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160 {
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161 return studyInstanceUid_;
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162 }
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163
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164 const std::string& GetSeriesInstanceUid() const
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165 {
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166 return seriesInstanceUid_;
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167 }
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168
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169 const std::string& GetSopInstanceUid() const
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170 {
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171 return sopInstanceUid_;
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172 }
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173
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174 size_t GetReferencedInstancesCount() const
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175 {
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176 return orderedInstances_.size();
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177 }
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178
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179 void GetReferencedInstance(std::string& studyInstanceUid,
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180 std::string& seriesInstanceUid,
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181 std::string& sopInstanceUid,
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182 std::string& sopClassUid,
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183 size_t i) const;
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184
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185 void ExportReferencedFrames(std::list<ReferencedFrame>& frames) const;
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186 };
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187 }