Mercurial > hg > orthanc-stone
annotate Framework/Toolbox/DicomInstanceParameters.h @ 1327:4f8db2d202c8 broker
OrthancSeriesProgressiveLoader now has two modes that
can be selected at object creation :
- progressive (will first load jpeg50, then jpeg90 then PAM)
- non-progressive (will directly load PAM (uncompressed))
Please note that the slice loading order remains dynamic
and depending upon the slice that the client code wishes
to extract from the volume.
| author | Benjamin Golinvaux <bgo@osimis.io> |
|---|---|
| date | Wed, 25 Mar 2020 14:34:27 +0100 |
| parents | 7ec8fea061b9 |
| children | 30deba7bc8e2 |
| rev | line source |
|---|---|
| 746 | 1 /** |
| 2 * Stone of Orthanc | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 746 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU Affero General Public License | |
| 9 * as published by the Free Software Foundation, either version 3 of | |
| 10 * the License, or (at your option) any later version. | |
| 11 * | |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 15 * Affero General Public License for more details. | |
| 16 * | |
| 17 * You should have received a copy of the GNU Affero General Public License | |
| 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 19 **/ | |
| 20 | |
| 21 | |
| 22 #pragma once | |
| 23 | |
| 24 #include "../StoneEnumerations.h" | |
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25 #include "../Scene2D/LookupTableTextureSceneLayer.h" |
| 746 | 26 #include "../Toolbox/CoordinateSystem3D.h" |
| 27 | |
| 28 #include <Core/IDynamicObject.h> | |
| 29 #include <Core/DicomFormat/DicomImageInformation.h> | |
| 30 | |
| 31 namespace OrthancStone | |
| 32 { | |
| 33 class DicomInstanceParameters : | |
| 34 public Orthanc::IDynamicObject /* to be used as a payload to SlicesSorter */ | |
| 35 { | |
| 36 // This class supersedes the deprecated "DicomFrameConverter" | |
| 37 | |
| 38 private: | |
| 39 struct Data // Struct to ease the copy constructor | |
| 40 { | |
| 41 std::string orthancInstanceId_; | |
| 42 std::string studyInstanceUid_; | |
| 43 std::string seriesInstanceUid_; | |
| 44 std::string sopInstanceUid_; | |
| 45 Orthanc::DicomImageInformation imageInformation_; | |
| 46 SopClassUid sopClassUid_; | |
| 47 double thickness_; | |
| 48 double pixelSpacingX_; | |
| 49 double pixelSpacingY_; | |
| 50 CoordinateSystem3D geometry_; | |
| 51 Vector frameOffsets_; | |
| 52 bool isColor_; | |
| 53 bool hasRescale_; | |
| 54 double rescaleIntercept_; | |
| 55 double rescaleSlope_; | |
| 56 bool hasDefaultWindowing_; | |
| 57 float defaultWindowingCenter_; | |
| 58 float defaultWindowingWidth_; | |
| 59 Orthanc::PixelFormat expectedPixelFormat_; | |
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60 bool hasIndexInSeries_; |
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61 unsigned int indexInSeries_; |
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62 std::string doseUnits_; |
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63 double doseGridScaling_; |
| 746 | 64 |
| 65 void ComputeDoseOffsets(const Orthanc::DicomMap& dicom); | |
| 66 | |
| 67 Data(const Orthanc::DicomMap& dicom); | |
| 68 | |
| 69 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const; | |
| 70 | |
| 71 bool IsPlaneWithinSlice(unsigned int frame, | |
| 72 const CoordinateSystem3D& plane) const; | |
| 73 | |
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74 void ApplyRescaleAndDoseScaling(Orthanc::ImageAccessor& image, |
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75 bool useDouble) const; |
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76 |
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77 double ApplyRescale(double value) const; |
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78 |
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79 bool ComputeRegularSpacing(double& target) const; |
| 746 | 80 }; |
| 81 | |
| 82 | |
| 83 Data data_; | |
| 84 | |
| 85 | |
| 86 public: | |
| 87 DicomInstanceParameters(const DicomInstanceParameters& other) : | |
| 88 data_(other.data_) | |
| 89 { | |
| 90 } | |
| 91 | |
| 92 DicomInstanceParameters(const Orthanc::DicomMap& dicom) : | |
| 93 data_(dicom) | |
| 94 { | |
| 95 } | |
| 96 | |
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97 DicomInstanceParameters* Clone() const |
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98 { |
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99 return new DicomInstanceParameters(*this); |
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100 } |
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101 |
| 746 | 102 void SetOrthancInstanceIdentifier(const std::string& id) |
| 103 { | |
| 104 data_.orthancInstanceId_ = id; | |
| 105 } | |
| 106 | |
| 107 const std::string& GetOrthancInstanceIdentifier() const | |
| 108 { | |
| 109 return data_.orthancInstanceId_; | |
| 110 } | |
| 111 | |
| 112 const Orthanc::DicomImageInformation& GetImageInformation() const | |
| 113 { | |
| 114 return data_.imageInformation_; | |
| 115 } | |
| 116 | |
| 117 const std::string& GetStudyInstanceUid() const | |
| 118 { | |
| 119 return data_.studyInstanceUid_; | |
| 120 } | |
| 121 | |
| 122 const std::string& GetSeriesInstanceUid() const | |
| 123 { | |
| 124 return data_.seriesInstanceUid_; | |
| 125 } | |
| 126 | |
| 127 const std::string& GetSopInstanceUid() const | |
| 128 { | |
| 129 return data_.sopInstanceUid_; | |
| 130 } | |
| 131 | |
| 132 SopClassUid GetSopClassUid() const | |
| 133 { | |
| 134 return data_.sopClassUid_; | |
| 135 } | |
| 136 | |
| 137 double GetThickness() const | |
| 138 { | |
| 139 return data_.thickness_; | |
| 140 } | |
| 141 | |
| 142 double GetPixelSpacingX() const | |
| 143 { | |
| 144 return data_.pixelSpacingX_; | |
| 145 } | |
| 146 | |
| 147 double GetPixelSpacingY() const | |
| 148 { | |
| 149 return data_.pixelSpacingY_; | |
| 150 } | |
| 151 | |
| 152 const CoordinateSystem3D& GetGeometry() const | |
| 153 { | |
| 154 return data_.geometry_; | |
| 155 } | |
| 156 | |
| 157 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const | |
| 158 { | |
| 159 return data_.GetFrameGeometry(frame); | |
| 160 } | |
| 161 | |
| 162 bool IsPlaneWithinSlice(unsigned int frame, | |
| 163 const CoordinateSystem3D& plane) const | |
| 164 { | |
| 165 return data_.IsPlaneWithinSlice(frame, plane); | |
| 166 } | |
| 167 | |
| 168 bool IsColor() const | |
| 169 { | |
| 170 return data_.isColor_; | |
| 171 } | |
| 172 | |
| 173 bool HasRescale() const | |
| 174 { | |
| 175 return data_.hasRescale_; | |
| 176 } | |
| 177 | |
| 178 double GetRescaleIntercept() const; | |
| 179 | |
| 180 double GetRescaleSlope() const; | |
| 181 | |
| 182 bool HasDefaultWindowing() const | |
| 183 { | |
| 184 return data_.hasDefaultWindowing_; | |
| 185 } | |
| 186 | |
| 187 float GetDefaultWindowingCenter() const; | |
| 188 | |
| 189 float GetDefaultWindowingWidth() const; | |
| 190 | |
| 191 Orthanc::PixelFormat GetExpectedPixelFormat() const | |
| 192 { | |
| 193 return data_.expectedPixelFormat_; | |
| 194 } | |
| 195 | |
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196 Orthanc::ImageAccessor* ConvertToFloat(const Orthanc::ImageAccessor& pixelData) const; |
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197 |
| 746 | 198 TextureBaseSceneLayer* CreateTexture(const Orthanc::ImageAccessor& pixelData) const; |
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199 |
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200 LookupTableTextureSceneLayer* CreateLookupTableTexture(const Orthanc::ImageAccessor& pixelData) const; |
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201 |
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202 bool HasIndexInSeries() const |
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203 { |
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204 return data_.hasIndexInSeries_; |
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205 } |
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206 |
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207 unsigned int GetIndexInSeries() const; |
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208 |
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209 const std::string& GetDoseUnits() const |
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210 { |
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211 return data_.doseUnits_; |
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212 } |
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213 |
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214 void SetDoseGridScaling(double value) |
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215 { |
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216 data_.doseGridScaling_ = value; |
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217 } |
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218 |
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219 double GetDoseGridScaling() const |
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220 { |
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221 return data_.doseGridScaling_; |
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222 } |
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223 |
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224 double ApplyRescale(double value) const |
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225 { |
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226 return data_.ApplyRescale(value); |
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227 } |
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228 |
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229 // Required for RT-DOSE |
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230 bool ComputeRegularSpacing(double& target) const |
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231 { |
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232 return data_.ComputeRegularSpacing(target); |
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233 } |
| 746 | 234 }; |
| 235 } |