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annotate Applications/Samples/SingleFrameEditorApplication.h @ 925:4639d0bf6390

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Added support for Grayscale16 in the multiframe loader (Victor)
author Benjamin Golinvaux <bgo@osimis.io>
date Mon, 22 Jul 2019 16:00:03 +0200
parents 4f2416d519b4
children efc5b62b9539
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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21
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22 #pragma once
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23
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24 #include "SampleApplicationBase.h"
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25
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26 #include "../../Framework/Radiography/RadiographyLayerCropTracker.h"
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27 #include "../../Framework/Radiography/RadiographyLayerMaskTracker.h"
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28 #include "../../Framework/Radiography/RadiographyLayerMoveTracker.h"
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29 #include "../../Framework/Radiography/RadiographyLayerResizeTracker.h"
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30 #include "../../Framework/Radiography/RadiographyLayerRotateTracker.h"
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31 #include "../../Framework/Radiography/RadiographyScene.h"
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32 #include "../../Framework/Radiography/RadiographySceneCommand.h"
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33 #include "../../Framework/Radiography/RadiographyWidget.h"
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34 #include "../../Framework/Radiography/RadiographyWindowingTracker.h"
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35 #include "../../Framework/Radiography/RadiographySceneWriter.h"
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36 #include "../../Framework/Radiography/RadiographySceneReader.h"
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37 #include "../../Framework/Radiography/RadiographyMaskLayer.h"
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38
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39 #include <Core/HttpClient.h>
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40 #include <Core/Images/FontRegistry.h>
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41 #include <Core/Logging.h>
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42 #include <Core/OrthancException.h>
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43
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44
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45 // Export using PAM is faster than using PNG, but requires Orthanc
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46 // core >= 1.4.3
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47 #define EXPORT_USING_PAM 1
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48
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50 namespace OrthancStone
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51 {
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52 namespace Samples
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53 {
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54 class RadiographyEditorInteractor :
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55 public Deprecated::IWorldSceneInteractor,
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56 public IObserver
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57 {
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58 private:
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59 enum Tool
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60 {
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61 Tool_Move,
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62 Tool_Rotate,
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63 Tool_Crop,
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64 Tool_Resize,
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65 Tool_Mask,
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66 Tool_Windowing
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67 };
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68
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70 StoneApplicationContext* context_;
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71 UndoRedoStack undoRedoStack_;
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72 Tool tool_;
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73 RadiographyMaskLayer* maskLayer_;
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74
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75
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76 static double GetHandleSize()
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77 {
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78 return 10.0;
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79 }
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80
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81
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82 public:
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83 RadiographyEditorInteractor(MessageBroker& broker) :
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84 IObserver(broker),
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85 context_(NULL),
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86 tool_(Tool_Move),
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87 maskLayer_(NULL)
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88 {
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89 }
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90
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91 void SetContext(StoneApplicationContext& context)
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92 {
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93 context_ = &context;
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94 }
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95
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96 void SetMaskLayer(RadiographyMaskLayer* maskLayer)
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97 {
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98 maskLayer_ = maskLayer;
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99 }
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100 virtual Deprecated::IWorldSceneMouseTracker* CreateMouseTracker(Deprecated::WorldSceneWidget& worldWidget,
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101 const Deprecated::ViewportGeometry& view,
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102 MouseButton button,
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103 KeyboardModifiers modifiers,
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104 int viewportX,
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105 int viewportY,
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106 double x,
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107 double y,
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108 Deprecated::IStatusBar* statusBar,
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109 const std::vector<Deprecated::Touch>& displayTouches)
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110 {
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111 RadiographyWidget& widget = dynamic_cast<RadiographyWidget&>(worldWidget);
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112
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113 if (button == MouseButton_Left)
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114 {
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115 size_t selected;
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116
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117 if (tool_ == Tool_Windowing)
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118 {
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119 return new RadiographyWindowingTracker(
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120 undoRedoStack_, widget.GetScene(),
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121 viewportX, viewportY,
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122 RadiographyWindowingTracker::Action_DecreaseWidth,
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123 RadiographyWindowingTracker::Action_IncreaseWidth,
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124 RadiographyWindowingTracker::Action_DecreaseCenter,
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125 RadiographyWindowingTracker::Action_IncreaseCenter);
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126 }
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127 else if (!widget.LookupSelectedLayer(selected))
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128 {
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129 // No layer is currently selected
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130 size_t layer;
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131 if (widget.GetScene().LookupLayer(layer, x, y))
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132 {
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133 widget.Select(layer);
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134 }
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135
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136 return NULL;
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137 }
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138 else if (tool_ == Tool_Crop ||
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139 tool_ == Tool_Resize ||
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140 tool_ == Tool_Mask)
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141 {
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142 RadiographyScene::LayerAccessor accessor(widget.GetScene(), selected);
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143
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144 ControlPoint controlPoint;
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145 if (accessor.GetLayer().LookupControlPoint(controlPoint, x, y, view.GetZoom(), GetHandleSize()))
358
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146 {
407
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147 switch (tool_)
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148 {
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149 case Tool_Crop:
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150 return new RadiographyLayerCropTracker
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151 (undoRedoStack_, widget.GetScene(), view, selected, controlPoint);
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152
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153 case Tool_Mask:
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154 return new RadiographyLayerMaskTracker
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155 (undoRedoStack_, widget.GetScene(), view, selected, controlPoint);
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156
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157 case Tool_Resize:
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158 return new RadiographyLayerResizeTracker
518
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159 (undoRedoStack_, widget.GetScene(), selected, controlPoint,
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160 (modifiers & KeyboardModifiers_Shift));
407
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161
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162 default:
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163 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
407
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164 }
384
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165 }
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166 else
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167 {
407
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168 size_t layer;
430
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169
407
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170 if (widget.GetScene().LookupLayer(layer, x, y))
384
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171 {
407
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172 widget.Select(layer);
384
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173 }
407
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174 else
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175 {
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176 widget.Unselect();
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177 }
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178
384
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179 return NULL;
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180 }
358
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181 }
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182 else
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183 {
407
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184 size_t layer;
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185
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186 if (widget.GetScene().LookupLayer(layer, x, y))
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187 {
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188 if (layer == selected)
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189 {
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190 switch (tool_)
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191 {
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192 case Tool_Move:
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193 return new RadiographyLayerMoveTracker
408
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194 (undoRedoStack_, widget.GetScene(), layer, x, y,
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195 (modifiers & KeyboardModifiers_Shift));
407
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196
430
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197 case Tool_Rotate:
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198 return new RadiographyLayerRotateTracker
408
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199 (undoRedoStack_, widget.GetScene(), view, layer, x, y,
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200 (modifiers & KeyboardModifiers_Shift));
430
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201
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202 default:
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203 break;
407
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204 }
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205
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206 return NULL;
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207 }
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208 else
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209 {
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210 widget.Select(layer);
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211 return NULL;
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212 }
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213 }
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214 else
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215 {
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216 widget.Unselect();
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217 return NULL;
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218 }
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219 }
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220 }
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221 else
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222 {
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223 return NULL;
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224 }
518
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225 return NULL;
407
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226 }
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diff changeset
227
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diff changeset
228 virtual void MouseOver(CairoContext& context,
726
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229 Deprecated::WorldSceneWidget& worldWidget,
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230 const Deprecated::ViewportGeometry& view,
407
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diff changeset
231 double x,
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diff changeset
232 double y,
726
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diff changeset
233 Deprecated::IStatusBar* statusBar)
407
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diff changeset
234 {
408
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diff changeset
235 RadiographyWidget& widget = dynamic_cast<RadiographyWidget&>(worldWidget);
407
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diff changeset
236
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diff changeset
237 #if 0
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238 if (statusBar != NULL)
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239 {
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diff changeset
240 char buf[64];
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diff changeset
241 sprintf(buf, "X = %.02f Y = %.02f (in cm)", x / 10.0, y / 10.0);
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242 statusBar->SetMessage(buf);
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243 }
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diff changeset
244 #endif
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diff changeset
245
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diff changeset
246 size_t selected;
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diff changeset
247
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diff changeset
248 if (widget.LookupSelectedLayer(selected) &&
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diff changeset
249 (tool_ == Tool_Crop ||
518
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diff changeset
250 tool_ == Tool_Resize ||
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diff changeset
251 tool_ == Tool_Mask))
407
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diff changeset
252 {
408
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diff changeset
253 RadiographyScene::LayerAccessor accessor(widget.GetScene(), selected);
430
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diff changeset
254
518
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diff changeset
255 ControlPoint controlPoint;
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diff changeset
256 if (accessor.GetLayer().LookupControlPoint(controlPoint, x, y, view.GetZoom(), GetHandleSize()))
407
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diff changeset
257 {
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diff changeset
258 double z = 1.0 / view.GetZoom();
430
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diff changeset
259
407
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diff changeset
260 context.SetSourceColor(255, 0, 0);
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diff changeset
261 cairo_t* cr = context.GetObject();
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diff changeset
262 cairo_set_line_width(cr, 2.0 * z);
518
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diff changeset
263 cairo_move_to(cr, controlPoint.x - GetHandleSize() * z, controlPoint.y - GetHandleSize() * z);
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diff changeset
264 cairo_line_to(cr, controlPoint.x + GetHandleSize() * z, controlPoint.y - GetHandleSize() * z);
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diff changeset
265 cairo_line_to(cr, controlPoint.x + GetHandleSize() * z, controlPoint.y + GetHandleSize() * z);
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diff changeset
266 cairo_line_to(cr, controlPoint.x - GetHandleSize() * z, controlPoint.y + GetHandleSize() * z);
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diff changeset
267 cairo_line_to(cr, controlPoint.x - GetHandleSize() * z, controlPoint.y - GetHandleSize() * z);
407
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diff changeset
268 cairo_stroke(cr);
358
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diff changeset
269 }
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diff changeset
270 }
339
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parents: 338
diff changeset
271 }
407
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diff changeset
272
726
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diff changeset
273 virtual void MouseWheel(Deprecated::WorldSceneWidget& widget,
407
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diff changeset
274 MouseWheelDirection direction,
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diff changeset
275 KeyboardModifiers modifiers,
726
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diff changeset
276 Deprecated::IStatusBar* statusBar)
344
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parents: 343
diff changeset
277 {
358
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diff changeset
278 }
407
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diff changeset
279
726
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diff changeset
280 virtual void KeyPressed(Deprecated::WorldSceneWidget& worldWidget,
407
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diff changeset
281 KeyboardKeys key,
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diff changeset
282 char keyChar,
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diff changeset
283 KeyboardModifiers modifiers,
726
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diff changeset
284 Deprecated::IStatusBar* statusBar)
345
55438b1ca317 drawing borders
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diff changeset
285 {
408
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diff changeset
286 RadiographyWidget& widget = dynamic_cast<RadiographyWidget&>(worldWidget);
407
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287
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288 switch (keyChar)
358
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289 {
430
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290 case 'a':
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291 widget.FitContent();
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292 break;
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293
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diff changeset
294 case 'c':
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295 tool_ = Tool_Crop;
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296 break;
407
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297
518
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298 case 'm':
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299 tool_ = Tool_Mask;
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300 widget.Select(1);
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301 break;
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302
430
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303 case 'd':
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304 {
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305 // dump to json and reload
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306 Json::Value snapshot;
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307 RadiographySceneWriter writer;
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308 writer.Write(snapshot, widget.GetScene());
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309
430
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310 LOG(INFO) << "JSON export was successful: "
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311 << snapshot.toStyledString();
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312
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313 boost::shared_ptr<RadiographyScene> scene(new RadiographyScene(GetBroker()));
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314 RadiographySceneReader reader(*scene, context_->GetOrthancApiClient());
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315
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316 Orthanc::FontRegistry fontRegistry;
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317 fontRegistry.AddFromResource(Orthanc::EmbeddedResources::FONT_UBUNTU_MONO_BOLD_16);
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318
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319 reader.SetFontRegistry(fontRegistry);
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320 reader.Read(snapshot);
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321
430
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322 widget.SetScene(scene);
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323 };break;
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324
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325 case 'e':
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326 {
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327 Orthanc::DicomMap tags;
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328
430
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329 // Minimal set of tags to generate a valid CR image
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330 tags.SetValue(Orthanc::DICOM_TAG_ACCESSION_NUMBER, "NOPE", false);
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331 tags.SetValue(Orthanc::DICOM_TAG_BODY_PART_EXAMINED, "PELVIS", false);
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332 tags.SetValue(Orthanc::DICOM_TAG_INSTANCE_NUMBER, "1", false);
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333 //tags.SetValue(Orthanc::DICOM_TAG_LATERALITY, "", false);
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334 tags.SetValue(Orthanc::DICOM_TAG_MANUFACTURER, "OSIMIS", false);
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335 tags.SetValue(Orthanc::DICOM_TAG_MODALITY, "CR", false);
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336 tags.SetValue(Orthanc::DICOM_TAG_PATIENT_BIRTH_DATE, "20000101", false);
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337 tags.SetValue(Orthanc::DICOM_TAG_PATIENT_ID, "hello", false);
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338 tags.SetValue(Orthanc::DICOM_TAG_PATIENT_NAME, "HELLO^WORLD", false);
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339 tags.SetValue(Orthanc::DICOM_TAG_PATIENT_ORIENTATION, "", false);
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340 tags.SetValue(Orthanc::DICOM_TAG_PATIENT_SEX, "M", false);
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341 tags.SetValue(Orthanc::DICOM_TAG_REFERRING_PHYSICIAN_NAME, "HOUSE^MD", false);
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342 tags.SetValue(Orthanc::DICOM_TAG_SERIES_NUMBER, "1", false);
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343 tags.SetValue(Orthanc::DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.1", false);
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344 tags.SetValue(Orthanc::DICOM_TAG_STUDY_ID, "STUDY", false);
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345 tags.SetValue(Orthanc::DICOM_TAG_VIEW_POSITION, "", false);
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346
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347 if (context_ != NULL)
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348 {
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349 widget.GetScene().ExportDicom(context_->GetOrthancApiClient(),
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350 tags, std::string(), 0.1, 0.1, widget.IsInverted(),
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351 widget.GetInterpolation(), EXPORT_USING_PAM);
407
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352 }
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353
430
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354 break;
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355 }
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356
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357 case 'i':
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358 widget.SwitchInvert();
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359 break;
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360
518
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361 case 't':
430
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362 tool_ = Tool_Move;
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363 break;
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364
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365 case 'n':
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366 {
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367 switch (widget.GetInterpolation())
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368 {
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369 case ImageInterpolation_Nearest:
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370 LOG(INFO) << "Switching to bilinear interpolation";
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371 widget.SetInterpolation(ImageInterpolation_Bilinear);
407
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372 break;
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373
430
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374 case ImageInterpolation_Bilinear:
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375 LOG(INFO) << "Switching to nearest neighbor interpolation";
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376 widget.SetInterpolation(ImageInterpolation_Nearest);
407
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377 break;
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378
430
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379 default:
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380 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
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381 }
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382
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diff changeset
383 break;
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diff changeset
384 }
407
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385
430
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diff changeset
386 case 'r':
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diff changeset
387 tool_ = Tool_Rotate;
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388 break;
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389
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diff changeset
390 case 's':
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diff changeset
391 tool_ = Tool_Resize;
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392 break;
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diff changeset
393
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diff changeset
394 case 'w':
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diff changeset
395 tool_ = Tool_Windowing;
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diff changeset
396 break;
407
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diff changeset
397
430
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diff changeset
398 case 'y':
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diff changeset
399 if (modifiers & KeyboardModifiers_Control)
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diff changeset
400 {
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diff changeset
401 undoRedoStack_.Redo();
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diff changeset
402 widget.NotifyContentChanged();
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diff changeset
403 }
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diff changeset
404 break;
407
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diff changeset
405
430
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diff changeset
406 case 'z':
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diff changeset
407 if (modifiers & KeyboardModifiers_Control)
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diff changeset
408 {
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diff changeset
409 undoRedoStack_.Undo();
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diff changeset
410 widget.NotifyContentChanged();
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diff changeset
411 }
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diff changeset
412 break;
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diff changeset
413
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diff changeset
414 default:
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diff changeset
415 break;
358
b8eeb49f3e65 cleaning up
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diff changeset
416 }
345
55438b1ca317 drawing borders
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parents: 344
diff changeset
417 }
407
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diff changeset
418 };
336
c7fdc8bac581 creating GrayscaleBitmapStack
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parents: 334
diff changeset
419
430
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diff changeset
420
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diff changeset
421
325
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diff changeset
422 class SingleFrameEditorApplication :
430
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diff changeset
423 public SampleSingleCanvasApplicationBase,
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diff changeset
424 public IObserver
325
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diff changeset
425 {
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parents:
diff changeset
426 private:
430
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diff changeset
427 boost::shared_ptr<RadiographyScene> scene_;
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diff changeset
428 RadiographyEditorInteractor interactor_;
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diff changeset
429 Orthanc::FontRegistry fontRegistry_;
518
40bb5eb247a5 Reverted a couple of files to AM version (wrong changes on my end)
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parents: 516
diff changeset
430 RadiographyMaskLayer* maskLayer_;
325
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parents:
diff changeset
431
37ab9d83dc9b reactivate SingleFrameApplication sample + Added SingleFrameEditorApplication (SDL only)
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parents:
diff changeset
432 public:
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parents:
diff changeset
433 SingleFrameEditorApplication(MessageBroker& broker) :
362
12cec26d08ce export of a valid DICOM CR
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diff changeset
434 IObserver(broker),
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diff changeset
435 interactor_(broker)
325
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parents:
diff changeset
436 {
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parents:
diff changeset
437 }
384
d20d75f20c5d better following of the MVC design pattern
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parents: 377
diff changeset
438
d20d75f20c5d better following of the MVC design pattern
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diff changeset
439 virtual ~SingleFrameEditorApplication()
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diff changeset
440 {
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diff changeset
441 LOG(WARNING) << "Destroying the application";
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diff changeset
442 }
325
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parents:
diff changeset
443
37ab9d83dc9b reactivate SingleFrameApplication sample + Added SingleFrameEditorApplication (SDL only)
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parents:
diff changeset
444 virtual void DeclareStartupOptions(boost::program_options::options_description& options)
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parents:
diff changeset
445 {
37ab9d83dc9b reactivate SingleFrameApplication sample + Added SingleFrameEditorApplication (SDL only)
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parents:
diff changeset
446 boost::program_options::options_description generic("Sample options");
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parents:
diff changeset
447 generic.add_options()
430
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448 ("instance", boost::program_options::value<std::string>(),
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449 "Orthanc ID of the instance")
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450 ("frame", boost::program_options::value<unsigned int>()->default_value(0),
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451 "Number of the frame, for multi-frame DICOM instances")
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452 ;
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453
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454 options.add(generic);
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455 }
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456
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457 virtual void Initialize(StoneApplicationContext* context,
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458 Deprecated::IStatusBar& statusBar,
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459 const boost::program_options::variables_map& parameters)
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460 {
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461 using namespace OrthancStone;
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462
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463 context_ = context;
417
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464 interactor_.SetContext(*context);
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465
358
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466 statusBar.SetMessage("Use the key \"a\" to reinitialize the layout");
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467 statusBar.SetMessage("Use the key \"c\" to crop");
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468 statusBar.SetMessage("Use the key \"e\" to export DICOM to the Orthanc server");
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469 statusBar.SetMessage("Use the key \"f\" to switch full screen");
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470 statusBar.SetMessage("Use the key \"i\" to invert contrast");
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471 statusBar.SetMessage("Use the key \"m\" to modify the mask");
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472 statusBar.SetMessage("Use the key \"n\" to switch between nearest neighbor and bilinear interpolation");
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473 statusBar.SetMessage("Use the key \"r\" to rotate objects");
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474 statusBar.SetMessage("Use the key \"s\" to resize objects (not applicable to DICOM layers)");
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475 statusBar.SetMessage("Use the key \"t\" to move (translate) objects");
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476 statusBar.SetMessage("Use the key \"w\" to change windowing");
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477
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478 statusBar.SetMessage("Use the key \"ctrl-z\" to undo action");
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479 statusBar.SetMessage("Use the key \"ctrl-y\" to redo action");
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480
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481 if (parameters.count("instance") != 1)
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482 {
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483 LOG(ERROR) << "The instance ID is missing";
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484 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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485 }
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486
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487 std::string instance = parameters["instance"].as<std::string>();
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488 //int frame = parameters["frame"].as<unsigned int>();
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489
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490 fontRegistry_.AddFromResource(Orthanc::EmbeddedResources::FONT_UBUNTU_MONO_BOLD_16);
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491
417
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492 scene_.reset(new RadiographyScene(GetBroker()));
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493
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494 RadiographyLayer& dicomLayer = scene_->LoadDicomFrame(context->GetOrthancApiClient(), instance, 0, false, NULL);
518
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495 //scene_->LoadDicomFrame(instance, frame, false); //.SetPan(200, 0);
535
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496 // = scene_->LoadDicomFrame(context->GetOrthancApiClient(), "61f3143e-96f34791-ad6bbb8d-62559e75-45943e1b", 0, false, NULL);
418
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497
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498 #if !defined(ORTHANC_ENABLE_WASM) || ORTHANC_ENABLE_WASM != 1
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499 Orthanc::HttpClient::ConfigureSsl(true, "/etc/ssl/certs/ca-certificates.crt");
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500 #endif
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501
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502 //scene_->LoadDicomWebFrame(context->GetWebService());
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503
518
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504 std::vector<Orthanc::ImageProcessing::ImagePoint> mask;
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505 mask.push_back(Orthanc::ImageProcessing::ImagePoint(1100, 100));
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506 mask.push_back(Orthanc::ImageProcessing::ImagePoint(1100, 1000));
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507 mask.push_back(Orthanc::ImageProcessing::ImagePoint(2000, 1000));
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508 mask.push_back(Orthanc::ImageProcessing::ImagePoint(2200, 150));
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509 mask.push_back(Orthanc::ImageProcessing::ImagePoint(1500, 550));
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510 maskLayer_ = dynamic_cast<RadiographyMaskLayer*>(&(scene_->LoadMask(mask, dynamic_cast<RadiographyDicomLayer&>(dicomLayer), 128.0f, NULL)));
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511 interactor_.SetMaskLayer(maskLayer_);
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512
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513 {
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514 RadiographyLayer& layer = scene_->LoadText(fontRegistry_.GetFont(0), "Hello\nworld", NULL);
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515 layer.SetResizeable(true);
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516 }
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517
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518 {
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519 RadiographyLayer& layer = scene_->LoadTestBlock(100, 50, NULL);
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520 layer.SetResizeable(true);
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521 layer.SetPan(0, 200);
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522 }
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523
337
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524
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525 mainWidget_ = new RadiographyWidget(GetBroker(), scene_, "main-widget");
325
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526 mainWidget_->SetTransmitMouseOver(true);
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527 mainWidget_->SetInteractor(interactor_);
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528
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529 //scene_->SetWindowing(128, 256);
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530 }
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531 };
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532 }
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533 }