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annotate OrthancStone/Sources/Toolbox/SortedFrames.cpp @ 1512:244ad1e4e76a

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reorganization of folders
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 07 Jul 2020 16:21:02 +0200
parents Framework/Toolbox/SortedFrames.cpp@5d892f5dd9c4
children 85e117739eca
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fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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1 /**
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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2 * Stone of Orthanc
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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4 * Department, University Hospital of Liege, Belgium
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #include "SortedFrames.h"
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23
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24 #include "GeometryToolbox.h"
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25
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26 #include <OrthancException.h>
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27 #include <Toolbox.h>
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28
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29 namespace OrthancStone
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30 {
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31 SortedFrames::Instance::Instance(const Orthanc::DicomMap& tags)
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32 {
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33 tags_.Assign(tags);
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34
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35 if (!tags.LookupStringValue(sopInstanceUid_, Orthanc::DICOM_TAG_SOP_INSTANCE_UID, false))
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36 {
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37 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat);
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38 }
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39
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40 uint32_t tmp;
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41 if (tags.ParseUnsignedInteger32(tmp, Orthanc::DICOM_TAG_NUMBER_OF_FRAMES))
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42 {
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43 numberOfFrames_ = tmp;
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44 }
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45 else
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46 {
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47 numberOfFrames_ = 1;
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48 }
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49
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50 std::string photometric;
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51 if (tags.LookupStringValue(photometric, Orthanc::DICOM_TAG_PHOTOMETRIC_INTERPRETATION, false))
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52 {
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53 Orthanc::Toolbox::StripSpaces(photometric);
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54 monochrome1_ = (photometric == "MONOCHROME1");
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55 }
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56 else
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57 {
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58 monochrome1_ = false;
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59 }
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60
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61 hasPosition_ = (
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62 LinearAlgebra::ParseVector(position_, tags, Orthanc::DICOM_TAG_IMAGE_POSITION_PATIENT) &&
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63 position_.size() == 3 &&
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64 GeometryToolbox::ComputeNormal(normal_, tags));
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65 }
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66
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67
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68 const Vector& SortedFrames::Instance::GetNormal() const
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69 {
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70 if (hasPosition_)
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71 {
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72 return normal_;
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73 }
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74 else
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75 {
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76 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
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77 }
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78 }
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79
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80
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81 const Vector& SortedFrames::Instance::GetPosition() const
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82 {
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83 if (hasPosition_)
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84 {
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85 return position_;
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86 }
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87 else
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88 {
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89 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
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90 }
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91 }
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92
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93
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94 SortedFrames::Frame::Frame(const Instance& instance,
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95 unsigned int frameIndex) :
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96 instance_(&instance),
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97 frameIndex_(frameIndex)
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98 {
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99 if (frameIndex >= instance.GetNumberOfFrames())
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100 {
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101 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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102 }
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103 }
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104
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105
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106 const SortedFrames::Instance& SortedFrames::GetInstance(size_t index) const
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107 {
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108 if (index >= instances_.size())
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109 {
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110 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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111 }
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112 else
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113 {
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114 assert(instances_[index] != NULL);
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115 return *instances_[index];
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116 }
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117 }
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118
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119
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120 const SortedFrames::Frame& SortedFrames::GetFrame(size_t index) const
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121 {
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122 if (!sorted_)
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123 {
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124 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls,
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125 "Sort() has not been called");
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126 }
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127 if (index >= frames_.size())
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128 {
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129 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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130 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
131 else
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
132 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
133 return frames_[index];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
134 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
135 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
136
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
137
1479
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
138 void SortedFrames::Clear()
1478
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
139 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
140 for (size_t i = 0; i < instances_.size(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
141 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
142 assert(instances_[i] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
143 delete instances_[i];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
144 }
1479
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
145
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
146 studyInstanceUid_.clear();
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
147 seriesInstanceUid_.clear();
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
148 frames_.clear();
5e3cfe87a873 SortedFrames::Clear()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1478
diff changeset
149 sorted_ = true;
1478
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
150 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
151
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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152
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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153 void SortedFrames::AddInstance(const Orthanc::DicomMap& tags)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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154 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
155 std::unique_ptr<Instance> instance(new Instance(tags));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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156
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
157 std::string studyInstanceUid, seriesInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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158 if (!tags.LookupStringValue(studyInstanceUid, Orthanc::DICOM_TAG_STUDY_INSTANCE_UID, false) ||
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
159 !tags.LookupStringValue(seriesInstanceUid, Orthanc::DICOM_TAG_SERIES_INSTANCE_UID, false))
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
160 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
161 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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162 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
163
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
164 if (instances_.empty())
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
165 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166 studyInstanceUid_ = studyInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
167 seriesInstanceUid_ = seriesInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
168 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
169 else
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
170 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
171 if (studyInstanceUid_ != studyInstanceUid ||
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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172 seriesInstanceUid_ != seriesInstanceUid)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
173 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
174 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
175 "Mixing instances from different series");
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
176 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
177 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
178
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
179 instances_.push_back(instance.release());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
180 sorted_ = false;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
181 frames_.clear();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
182 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
183
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
184
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
185 void SortedFrames::AddFramesOfInstance(std::set<size_t>& remainingInstances,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
186 size_t index)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
187 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
188 assert(instances_[index] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
189 const Instance& instance = *instances_[index];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
190
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
191 for (unsigned int i = 0; i < instance.GetNumberOfFrames(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
192 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
193 frames_.push_back(Frame(instance, i));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
194 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
195
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
196 assert(remainingInstances.find(index) != remainingInstances.end());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
197 remainingInstances.erase(index);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
198 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
199
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
200
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
201 namespace
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
202 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
203 template<typename T>
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
204 class SortableItem
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
205 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
206 private:
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
207 T value_;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
208 size_t instance_;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
209 std::string sopInstanceUid_;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
210
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
211 public:
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
212 SortableItem(const T& value,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
213 size_t instance,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
214 const std::string& sopInstanceUid) :
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
215 value_(value),
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
216 instance_(instance),
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
217 sopInstanceUid_(sopInstanceUid)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
218 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
219 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
220
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
221 size_t GetInstanceIndex() const
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
222 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
223 return instance_;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
224 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
225
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
226 bool operator< (const SortableItem& other) const
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
227 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
228 return (value_ < other.value_ ||
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
229 (value_ == other.value_ &&
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
230 sopInstanceUid_ < other.sopInstanceUid_));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
231 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
232 };
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
233 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
234
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
235
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
236 void SortedFrames::SortUsingIntegerTag(std::set<size_t>& remainingInstances,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
237 const Orthanc::DicomTag& tag)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
238 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
239 std::vector< SortableItem<int32_t> > items;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
240 items.reserve(remainingInstances.size());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
241
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
242 for (std::set<size_t>::const_iterator it = remainingInstances.begin();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
243 it != remainingInstances.end(); ++it)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
244 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
245 assert(instances_[*it] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
246 const Instance& instance = *instances_[*it];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
247
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
248 int32_t value;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249 std::string sopInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 if (instance.GetTags().ParseInteger32(value, tag) &&
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251 instance.GetTags().LookupStringValue(
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 sopInstanceUid, Orthanc::DICOM_TAG_SOP_INSTANCE_UID, false))
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
254 items.push_back(SortableItem<int32_t>(value, *it, sopInstanceUid));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
255 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
258 std::sort(items.begin(), items.end());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
259
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
260 for (size_t i = 0; i < items.size(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
261 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262 AddFramesOfInstance(remainingInstances, items[i].GetInstanceIndex());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
263 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
265
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267 void SortedFrames::SortUsingSopInstanceUid(std::set<size_t>& remainingInstances)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
268 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 std::vector<SortableItem<int32_t> > items;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270 items.reserve(remainingInstances.size());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272 for (std::set<size_t>::const_iterator it = remainingInstances.begin();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
273 it != remainingInstances.end(); ++it)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
274 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275 assert(instances_[*it] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 const Instance& instance = *instances_[*it];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278 std::string sopInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
279 if (instance.GetTags().LookupStringValue(
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280 sopInstanceUid, Orthanc::DICOM_TAG_SOP_INSTANCE_UID, false))
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
281 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
282 items.push_back(SortableItem<int32_t>(0 /* arbitrary value */, *it, sopInstanceUid));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
285
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
286 std::sort(items.begin(), items.end());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
287
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288 for (size_t i = 0; i < items.size(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
289 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
290 AddFramesOfInstance(remainingInstances, items[i].GetInstanceIndex());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
291 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
292 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
293
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
294
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
295 void SortedFrames::SortUsing3DLocation(std::set<size_t>& remainingInstances)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
296 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
297 /**
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
298 * Compute the mean of the normal vectors, using the recursive
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
299 * formula for arithmetic means for numerical stability.
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
300 * https://diego.assencio.com/?index=c34d06f4f4de2375658ed41f70177d59
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
301 **/
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
302
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
303 Vector meanNormal;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304 LinearAlgebra::AssignVector(meanNormal, 0, 0, 0);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
305
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 unsigned int n = 0;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
308 for (std::set<size_t>::const_iterator it = remainingInstances.begin();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 it != remainingInstances.end(); ++it)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
310 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
311 assert(instances_[*it] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
312 const Instance& instance = *instances_[*it];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
313
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314 if (instance.HasPosition())
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
316 n += 1;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
317 meanNormal += (instance.GetNormal() - meanNormal) / static_cast<float>(n);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321 std::vector<SortableItem<float> > items;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
322 items.reserve(n);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
323
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
324 for (std::set<size_t>::const_iterator it = remainingInstances.begin();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325 it != remainingInstances.end(); ++it)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
326 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
327 assert(instances_[*it] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
328 const Instance& instance = *instances_[*it];
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
329
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
330 std::string sopInstanceUid;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
331 if (instance.HasPosition() &&
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332 instance.GetTags().LookupStringValue(
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333 sopInstanceUid, Orthanc::DICOM_TAG_SOP_INSTANCE_UID, false))
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
335 double p = LinearAlgebra::DotProduct(meanNormal, instance.GetPosition());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 items.push_back(SortableItem<float>(p, *it, sopInstanceUid));
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
337 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
339
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
340 assert(items.size() <= n);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
341
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
342 std::sort(items.begin(), items.end());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
343
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
344 for (size_t i = 0; i < items.size(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
345 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
346 AddFramesOfInstance(remainingInstances, items[i].GetInstanceIndex());
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
347 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
348 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
349
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
350
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
351 size_t SortedFrames::GetFramesCount() const
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
353 if (sorted_)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 return frames_.size();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
356 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357 else
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls,
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 "Sort() has not been called");
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 void SortedFrames::Sort()
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367 if (!sorted_)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
369 size_t totalFrames = 0;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
370 std::set<size_t> remainingInstances;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
371
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 for (size_t i = 0; i < instances_.size(); i++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
373 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
374 assert(instances_[i] != NULL);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
375 totalFrames += instances_[i]->GetNumberOfFrames();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
376
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
377 remainingInstances.insert(i);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
378 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
379
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
380 frames_.clear();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
381 frames_.reserve(totalFrames);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
382
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
383 SortUsingIntegerTag(remainingInstances, Orthanc::DICOM_TAG_INSTANCE_NUMBER); // VR is "IS"
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
384 SortUsingIntegerTag(remainingInstances, Orthanc::DICOM_TAG_IMAGE_INDEX); // VR is "US"
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
385 SortUsing3DLocation(remainingInstances);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
386 SortUsingSopInstanceUid(remainingInstances);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
387
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
388 // The following could in theory happen if several instances
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
389 // have the same SOPInstanceUID, no ordering is available
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
390 for (std::set<size_t>::const_iterator it = remainingInstances.begin();
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
391 it != remainingInstances.end(); it++)
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
392 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
393 AddFramesOfInstance(remainingInstances, *it);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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394 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
395
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
396 if (frames_.size() != totalFrames ||
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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397 !remainingInstances.empty())
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
398 {
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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399 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
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400 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
401
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
402 sorted_ = true;
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
403 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
404 }
fab6c6e795a3 Framework/Toolbox/SortedFrames.cpp
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405 }